Miyakogusa Predicted Gene

Lj0g3v0212459.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0212459.1 Non Characterized Hit- tr|K4A1K8|K4A1K8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si032752,31.11,0.0000001,DUF827,Protein of unknown function DUF827,
plant; seg,NULL;
coiled-coil,NULL,NODE_75378_length_988_cov_10.942307.path1.1
         (289 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g079700.1 | DUF827 family protein | HC | chr8:34172148-341...   262   3e-70

>Medtr8g079700.1 | DUF827 family protein | HC |
           chr8:34172148-34171183 | 20130731
          Length = 321

 Score =  262 bits (669), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 143/256 (55%), Positives = 170/256 (66%), Gaps = 1/256 (0%)

Query: 35  SAMQSWLDSKPLIDELERQKANLADAQQSSNTSETDIAXXXXXXXXXXXXXXXXREDQLK 94
           +AMQSWLDSKPLIDELE+QK NLA+AQQ+SNT E  I                 RED +K
Sbjct: 42  NAMQSWLDSKPLIDELEKQKTNLANAQQNSNTPEIAIVELESQLEITEKSIKSKREDHVK 101

Query: 95  TERMIDEMNHVLDQTRNEMXXXXXXXXXXXQTRAKLRQTLHLRRNXXXXXXXXXXXXXXE 154
           TE MI E+NH LDQ  N+M           QTRAKL+QTLHLRR               E
Sbjct: 102 TENMIYEINHALDQMCNDMERLKHNIKKEKQTRAKLKQTLHLRRRTVQTLQLTLQAVLLE 161

Query: 155 SDVVEESTAEAIQEINHSESHTGAIQLTREDYHALKRKAGEKISRANWLISASMEQKHAA 214
            D VE STA+A Q INHSE++T  +QL+  DY+ALKR+A E+ S+ANW +S SMEQK AA
Sbjct: 162 LDAVEVSTAKAFQLINHSENNTSDVQLSHRDYYALKRRAEERKSQANWRVSVSMEQKLAA 221

Query: 215 EATRELASSRLNKFYSNRSLSTNRRNKTGEWCTEK-GKRQEAIVEEEVATNIESASPTSN 273
           EATRE A SRLN FYS++S S NRRN TG+W  EK  K ++ IV++EV TNI SASP S+
Sbjct: 222 EATREFALSRLNHFYSSKSWSRNRRNITGQWHKEKEAKTKDVIVQDEVTTNINSASPKSH 281

Query: 274 AKSLAKFEGGKPQQSR 289
           AKSL K EGGK Q S+
Sbjct: 282 AKSLVKSEGGKRQHSK 297