Miyakogusa Predicted Gene

Lj0g3v0211229.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0211229.2 Non Characterized Hit- tr|I1J8L5|I1J8L5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.54,0,ARM
repeat,Armadillo-type fold; seg,NULL; ATM-RELATED,NULL; ATAXIA
TELANGIECTASIA MUTATED (ATM)-RELA,CUFF.13569.2
         (740 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g022000.1 | transformation/transcription domain associated...  1117   0.0  

>Medtr5g022000.1 | transformation/transcription domain associated
            protein | HC | chr5:8590853-8618340 | 20130731
          Length = 3868

 Score = 1117 bits (2889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 564/752 (75%), Positives = 611/752 (81%), Gaps = 18/752 (2%)

Query: 1    MYIIYSDAGQPLRDELAKSTQKILASAFSEFLPKSEVAM------------GEDILVVPS 48
            MYII S+AGQPLRDEL+KS QKIL+SAFSEF+PKSEVAM            GE+  V  S
Sbjct: 1541 MYIICSEAGQPLRDELSKSPQKILSSAFSEFMPKSEVAMASSSTIANATLSGEENHVSAS 1600

Query: 49   TDASNASARAPNATSDAYFQGLELIKTLVKLIPRWLQNNRTVFDTLVLVWKSPGRISRLE 108
            +D SN     PNATSDAYFQGL LIKTLVKL+P WLQ+NR VFDTLVLVWKSP RISRL+
Sbjct: 1601 SDGSNVLVPTPNATSDAYFQGLALIKTLVKLMPGWLQSNRAVFDTLVLVWKSPARISRLQ 1660

Query: 109  NEQELNLMQVKESKWLVKCFLNYLRHEKAEVNVLFDILTIFLVRSRIDYTFLKQFYIIEV 168
            NEQELNL+Q+KESKWL+KCFLNYLRH+K EVNVLFDILTIFL  SRIDYTFLK+FYIIEV
Sbjct: 1661 NEQELNLVQIKESKWLIKCFLNYLRHDKNEVNVLFDILTIFLFHSRIDYTFLKEFYIIEV 1720

Query: 169  AEGYLPSLKKNLLSHFLNSFQSKQLGQDHLVILMQMLILPMLAHAFQNDHSSEVVDSAMI 228
            AEGY  S+KK LL HFLN FQSKQLG DHLVI+MQMLILPMLAHAFQN  S EVVD A+I
Sbjct: 1721 AEGYPSSMKKALLLHFLNLFQSKQLGHDHLVIVMQMLILPMLAHAFQNGQSWEVVDPAII 1780

Query: 229  RTIVDKLFDPPEEVLAEYDEPXXXXXXXXXXXXXXXXXXXXFDHRMQLFKFGWNHLKRED 288
            +TIVDKL DPPEE+ AEYDEP                      HR +L KFGWNHLKRED
Sbjct: 1781 KTIVDKLLDPPEEISAEYDEPLRIELLQLATLLLKYLQNDLVHHRKELIKFGWNHLKRED 1840

Query: 289  TVSKQWAFVNVCHFFEAYEAPENLIVKVFVVLLETSVTFQLENKMFVKQALDTLMPALQR 348
            T SKQWAFVNVCHF EAY+APE +I++VFV LL T    Q EN+M V+QALD LMPAL +
Sbjct: 1841 TASKQWAFVNVCHFLEAYQAPEKIILQVFVALLRTC---QPENRMLVRQALDILMPALPK 1897

Query: 349  RLPLGDSRMPTWIRCTEKILVEYSHSIPNLIQIFQLIIRHSDLFYSYRAKFIPQLVNSLS 408
            RLPLGDSRMP WIR T+KILVE  HSIPNLI IFQLI+RHSDLFYS RA+F+PQ+VNSLS
Sbjct: 1898 RLPLGDSRMPIWIRYTKKILVEEGHSIPNLIHIFQLIVRHSDLFYSCRAQFVPQMVNSLS 1957

Query: 409  HLGLQPNNTTAEIRCLAIELAGLVINWESQRQNEMKLKVVTDSDAPSQINDVFHPSSAES 468
             LGL P NTT E R LAIELAGLV+NWE QRQNEMK  VVTDSDAP+QINDVF+PSSAES
Sbjct: 1958 RLGL-PYNTTTENRRLAIELAGLVVNWERQRQNEMK--VVTDSDAPNQINDVFNPSSAES 2014

Query: 469  QRSVDGSIFPEDTTKRVKATPGLQSVCVMSPGGPSSIPNIEPPGSASQPDEEFKPNAAME 528
            +RSV+GS FP+DTTKRVKA PGLQ +CVMSPGGPSSIPNIE PGS+SQPDEEFKPNAAME
Sbjct: 2015 KRSVEGSTFPDDTTKRVKAEPGLQPLCVMSPGGPSSIPNIETPGSSSQPDEEFKPNAAME 2074

Query: 529  EMIINFLISVALVIDPKDKEESAMYKQALELLSQALEVWPNVYVQFKYLEKLLSSIQPSE 588
            EMIINFLI VALVI+PKDKE SAMYKQALELLSQALEVWPN  V+F YLEKLLSSIQPS+
Sbjct: 2075 EMIINFLIRVALVIEPKDKEASAMYKQALELLSQALEVWPNANVKFNYLEKLLSSIQPSQ 2134

Query: 589  AKYPSIALAQGLDVMNKVLEKQPHLFIRNNINQISQILELCFKLKLLDAGKSFCSLLKMI 648
            AK PS ALAQGLDVMNKVLEKQPH+FIRNNINQISQILE CFK KLLDAGKSFCSLL+MI
Sbjct: 2135 AKDPSTALAQGLDVMNKVLEKQPHMFIRNNINQISQILEPCFKHKLLDAGKSFCSLLRMI 2194

Query: 649  FVAFPQEATSTPPDVKQLYQKLDDLIQKHVTTVMAPQXXXXXXXXXXXXFLLLVIKTLTE 708
             VAFPQEA STP DVK LYQK+DDLIQKHVTTV APQ            FLLLVIKTLTE
Sbjct: 2195 CVAFPQEAASTPADVKLLYQKVDDLIQKHVTTVTAPQTSSDDNNAGAISFLLLVIKTLTE 2254

Query: 709  AQRNFVDPXXXXXXXXXXXXDWGSSVGSQIRQ 740
             QRNF+DP            D GSS GS IRQ
Sbjct: 2255 VQRNFIDPLVLVRLLQRLQRDMGSSAGSHIRQ 2286