Miyakogusa Predicted Gene
- Lj0g3v0210949.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0210949.1 Non Characterized Hit- tr|I1JKL9|I1JKL9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43272
PE,83.07,0,SUBFAMILY NOT NAMED,NULL; ATP-DEPENDENT RNA HELICASE,NULL;
DEAD-like helicases superfamily,Helicase,,CUFF.13584.1
(579 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g023590.1 | ATP-dependent RNA helicase DHX37-like protein,... 869 0.0
Medtr4g120070.1 | RNA helicase, putative | HC | chr4:49772806-49... 775 0.0
Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 206 5e-53
Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 202 6e-52
Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 201 1e-51
Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 201 1e-51
Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 201 1e-51
Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 201 1e-51
Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 201 1e-51
Medtr3g070430.1 | ATP-dependent RNA helicase, putative | LC | ch... 200 2e-51
Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC | chr7:3... 199 5e-51
Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 198 1e-50
Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:51... 197 2e-50
Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 194 2e-49
Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 192 9e-49
Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 192 9e-49
Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 192 1e-48
Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 190 4e-48
Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA hel... 189 7e-48
Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA hel... 189 9e-48
Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC | chr2:4... 179 8e-45
Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 176 5e-44
Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 176 5e-44
Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 147 4e-35
Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein ... 124 3e-28
Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein ... 124 4e-28
Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein ... 123 4e-28
Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein ... 123 4e-28
Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein ... 123 4e-28
Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein ... 123 4e-28
Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein ... 123 4e-28
Medtr1g056490.1 | ATP-dependent RNA helicase | HC | chr1:2472920... 122 1e-27
Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein ... 112 8e-25
Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC | ch... 110 5e-24
Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC | ch... 109 7e-24
Medtr4g134790.2 | ATP-dependent RNA helicase | HC | chr4:5652988... 107 3e-23
Medtr4g134790.1 | ATP-dependent RNA helicase | HC | chr4:5652988... 107 3e-23
Medtr1g088590.1 | zinc finger CCCH domain protein | HC | chr1:39... 100 5e-21
Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC | c... 100 5e-21
Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC | c... 96 1e-19
Medtr0267s0070.1 | NB-ARC domain disease resistance protein, put... 95 2e-19
Medtr1543s0010.1 | pre-mRNA-splicing factor ATP-dependent RNA he... 88 2e-17
Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein |... 86 1e-16
Medtr8g045110.1 | ATP-dependent RNA helicase A-like protein | HC... 71 2e-12
>Medtr4g023590.1 | ATP-dependent RNA helicase DHX37-like protein,
putative | HC | chr4:7996592-7989993 | 20130731
Length = 1331
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/573 (76%), Positives = 481/573 (83%), Gaps = 8/573 (1%)
Query: 1 MMEQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVA 60
MMEQEIMEAI +S VI+CGETGCGKTTQVPQFLYEAGYGSSK H +GIIGVTQPRRVA
Sbjct: 276 MMEQEIMEAINYNSSVIVCGETGCGKTTQVPQFLYEAGYGSSKFHARSGIIGVTQPRRVA 335
Query: 61 VLATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVI 120
VLATAKRVAYELG+RLGKEVGFQVRYDKKIGE+CSIKFMTDGILLRE+QNDILL RYSV+
Sbjct: 336 VLATAKRVAYELGVRLGKEVGFQVRYDKKIGENCSIKFMTDGILLREVQNDILLRRYSVL 395
Query: 121 ILDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSAT 180
ILDEAHERSLNTDILIGMLSR+I+TRQK YDEQQK++LSG +ISP+KMVFPLKLVLMSAT
Sbjct: 396 ILDEAHERSLNTDILIGMLSRVIRTRQKIYDEQQKMVLSGESISPDKMVFPLKLVLMSAT 455
Query: 181 LRVQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGG 240
LRVQDFTSGRLFHTPPPVIEVPTRQFPVT+YFA+KTE TDY+GAAYKK+L IHK+LP GG
Sbjct: 456 LRVQDFTSGRLFHTPPPVIEVPTRQFPVTMYFAKKTEITDYVGAAYKKILAIHKKLPSGG 515
Query: 241 ILVFVTGQREVEDLCRKLRKASKEFVTKKLKGSVINDSTVVPETNSVEGIDISEINEALE 300
ILVFVTGQREVEDLCRKLRKASKEF+ KK+KGSV NDS VV ET+SVEGI+I+EINEA E
Sbjct: 516 ILVFVTGQREVEDLCRKLRKASKEFIMKKVKGSVENDSNVVNETSSVEGININEINEAFE 575
Query: 301 IRGSSSIQQTDRFNGHDEDEDGIDENESDDFSYXXXXXXXXXXXXXXXXXXHSKNKNNIV 360
+ GSSS+QQTDRF+G+DED++ DENESD + S+N NNIV
Sbjct: 576 MPGSSSMQQTDRFSGYDEDDNNFDENESDSYD-SETESELEFNDDDKNNHNGSENNNNIV 634
Query: 361 DVLGQEGSLASLKAAFENLYGQAPLSSSNGERAISVNTGNELDQPKVVSEKMAKENCSPS 420
DVLG EGSLASLKAAFENL GQA LSSSN VNT + LDQ KV EK+A+EN S
Sbjct: 635 DVLGNEGSLASLKAAFENLSGQATLSSSN------VNTEDGLDQSKVGREKIARENHDSS 688
Query: 421 PGPLFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVK 480
PG LFVLPLYAMLPAAAQLRVF+GVKE ERLVVVATNVAETSLTIPGIKYVVDTGREKVK
Sbjct: 689 PGALFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVK 748
Query: 481 KYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKV 540
YDSSNGMETYEV+WI GHCYRLYSSAAF+NEFP++SPAEVEKV
Sbjct: 749 NYDSSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKV 808
Query: 541 PVHGVVLLLKSMHIKKVGYIFSFYLSFHSTCFL 573
PVHGVVLLLKSM IKKV F F S + L
Sbjct: 809 PVHGVVLLLKSMQIKKVAN-FPFPTSLKAASLL 840
>Medtr4g120070.1 | RNA helicase, putative | HC |
chr4:49772806-49778936 | 20130731
Length = 1256
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/559 (71%), Positives = 437/559 (78%), Gaps = 38/559 (6%)
Query: 45 HVHNGIIGVTQPRRVAVLATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGIL 104
H H+GIIGVTQPRRVAVLATAKRVAYELG+RLGKEVGFQVRYDKKIGE+CSIKFMTDGIL
Sbjct: 216 HAHSGIIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGENCSIKFMTDGIL 275
Query: 105 LRELQ------------------------------NDILLSRYSVIILDEAHERSLNTDI 134
L NDILL RYSV+ILDEAHERSLNTDI
Sbjct: 276 LIMCHCYYYCGSVAAVYYIVMILFIPLYTQICCSDNDILLRRYSVLILDEAHERSLNTDI 335
Query: 135 LIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQDFTSGRLFHT 194
LIGMLSR+I+TRQK YDEQQK++LSG +IS +KMVFPLKLVLMSATLRVQDFTSGRLFH+
Sbjct: 336 LIGMLSRVIRTRQKIYDEQQKMVLSGESISLDKMVFPLKLVLMSATLRVQDFTSGRLFHS 395
Query: 195 PPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGILVFVTGQREVEDL 254
PPPVIEVPTR+FPVTVYFA+KTE TDY+GAAYKK+L IHK+LP GGILVFVTGQREVEDL
Sbjct: 396 PPPVIEVPTRKFPVTVYFAKKTEITDYVGAAYKKILAIHKKLPSGGILVFVTGQREVEDL 455
Query: 255 CRKLRKASKEFVTKKLKGSVINDSTVVPETNSVEGIDISEINEALEIRGSSSIQQTDRFN 314
CRKLRKASKEF+ KK+KGSV NDS VV ET+SVEGI+I+EINEA E+ GSSS+QQTDRF+
Sbjct: 456 CRKLRKASKEFIMKKVKGSVENDSNVVNETSSVEGININEINEAFEMPGSSSMQQTDRFS 515
Query: 315 GHDEDEDGIDENESDDFSYXXXXXXXXXXXXXXXXXXHSKNKNNIVDVLGQEGSLASLKA 374
G+DED++ DENESD + SKN NNIVDVLG EGSLASLKA
Sbjct: 516 GYDEDDNNFDENESDSYD-SETESELEFNDDDKNNHEGSKNNNNIVDVLGNEGSLASLKA 574
Query: 375 AFENLYGQAPLSSSNGERAISVNTGNELDQPKVVSEKMAKENCSPSPGPLFVLPLYAMLP 434
AFENL GQA LSSSN VNT + LDQ KV EK+A+EN SPG LFVLPLYAMLP
Sbjct: 575 AFENLSGQATLSSSN------VNTEDSLDQSKVGREKIARENHDSSPGALFVLPLYAMLP 628
Query: 435 AAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYDSSNGMETYEVQ 494
AAAQLRVF+GVKE ERLVVVATNVAETSLTIPGIKYVVDTGREKVK YDSSNGMETYEV+
Sbjct: 629 AAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYDSSNGMETYEVK 688
Query: 495 WIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVHGVVLLLKSMHI 554
WI GHCYRLYSSAAF+NEFP++SPAEVEKVPVHGVVLLLKSM I
Sbjct: 689 WISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVHGVVLLLKSMQI 748
Query: 555 KKVGYIFSFYLSFHSTCFL 573
KKV F F S + L
Sbjct: 749 KKVAN-FPFPTSLKAASLL 766
>Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr2:42091662-42101447 | 20130731
Length = 1269
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 160/270 (59%), Gaps = 33/270 (12%)
Query: 2 MEQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAV 61
+ +E+++ I ++ V++ GETG GKTTQ+ Q+LYE GY GI+G TQPRRVA
Sbjct: 576 VREELLQVIRENQVVVVVGETGSGKTTQLTQYLYEDGY------TIGGIVGCTQPRRVAA 629
Query: 62 LATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVII 121
++ AKRV+ E+ LG +VG+ +R++ G + IK+MTDG+LLRE D L +Y VI+
Sbjct: 630 MSVAKRVSEEMDTELGDKVGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVIV 689
Query: 122 LDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATL 181
+DEAHERSL+TD+L G+L +++ R+ F KL++ SATL
Sbjct: 690 MDEAHERSLSTDVLFGILKKVVAQRRDF-----------------------KLIVTSATL 726
Query: 182 RVQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGI 241
Q F+ F P+ +P R FPV + ++ KT DY+ A K+ +TIH PPG I
Sbjct: 727 NAQKFSH---FFGSVPIFHIPGRTFPVNILWS-KTPVEDYVEGAVKQAMTIHVTSPPGDI 782
Query: 242 LVFVTGQREVEDLCRKLRKASKEFVTKKLK 271
L+F+TGQ E+E C L + ++ V+ K
Sbjct: 783 LIFMTGQDEIEAACYSLAERMEQMVSSSNK 812
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 79/134 (58%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L +LP+Y+ LPA Q ++F+ ++ R +VATN+AETSLT+ GI +V+DTG K+K Y+
Sbjct: 817 LLILPIYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIFFVIDTGYGKMKVYN 876
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
GM+ +V + PG CYRLY+ +A+ NE E+++ +
Sbjct: 877 PRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLASPVPEIQRTNLG 936
Query: 544 GVVLLLKSMHIKKV 557
VVLLLKS+ ++ +
Sbjct: 937 NVVLLLKSLKVENL 950
>Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 | HC | chr3:21592985-21589785 | 20130731
Length = 1066
Score = 202 bits (515), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 158/266 (59%), Gaps = 33/266 (12%)
Query: 2 MEQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAV 61
+ +E+++ I ++ V++ GETG GKTTQ+ Q+LYE GY GI+G TQPRRVA
Sbjct: 373 VREELLQVIRENQVVVVVGETGSGKTTQLTQYLYEDGY------TIGGIVGCTQPRRVAA 426
Query: 62 LATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVII 121
++ AKRV+ E+ LG +VG+ +R++ G + IK+MTDG+LLRE D L +Y VI+
Sbjct: 427 MSVAKRVSEEMDTELGDKVGYAIRFEDVTGPNTIIKYMTDGVLLRETLKDSDLDKYRVIV 486
Query: 122 LDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATL 181
+DEAHERSL+TD+L G+L +++ R+ F KL++ SATL
Sbjct: 487 MDEAHERSLSTDVLFGILKKVVTQRRDF-----------------------KLIVTSATL 523
Query: 182 RVQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGI 241
Q F+ F P+ +P R FP+ + ++ K DY+ A K+ +TIH PPG I
Sbjct: 524 NAQKFSH---FFGNVPIFHIPGRTFPINILWS-KIPVEDYVKGAVKQAMTIHMTSPPGDI 579
Query: 242 LVFVTGQREVEDLCRKLRKASKEFVT 267
L+F+TGQ E+E C L + ++ V+
Sbjct: 580 LIFMTGQDEIEAACYSLAEKMEQMVS 605
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L +LP+Y+ LPA Q ++F+ ++ R +VATN+AETSLT+ GI YV+DTG K+K Y+
Sbjct: 614 LLILPVYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 673
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
GM+ +V + PG CYRLY+ +A+ NE E+++ +
Sbjct: 674 PRMGMDALQVFPVSQAAANQRAGRAGRTGPGTCYRLYTESAYLNEMLASPVPEIQRTNLG 733
Query: 544 GVVLLLKSMHIKKV 557
VVLLLKS+ ++ +
Sbjct: 734 NVVLLLKSLKVENL 747
>Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/257 (43%), Positives = 163/257 (63%), Gaps = 33/257 (12%)
Query: 2 MEQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAV 61
+++E+++A+ D+ +++ GETG GKTTQV Q+L EAGY + G IG TQPRRVA
Sbjct: 575 LKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT------RGKIGCTQPRRVAA 628
Query: 62 LATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVII 121
++ AKRVA E G RLG+EVG+ +R++ G IK+MTDG+LLRE+ D LS+YSVI+
Sbjct: 629 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIM 688
Query: 122 LDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATL 181
LDEAHER+++TD+L G+L +++K R PE L+L++ SATL
Sbjct: 689 LDEAHERTIHTDVLFGLLKQLVKRR------------------PE-----LRLIVTSATL 725
Query: 182 RVQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGI 241
+ F SG F+ + +P R FPV + + ++ E +DY+ A+ VL IH P G I
Sbjct: 726 DAEKF-SGYFFNC--NIFTIPGRTFPVEILYTKQPE-SDYLDASLITVLQIHLTEPEGDI 781
Query: 242 LVFVTGQREVEDLCRKL 258
L+F+TGQ E++ C+ L
Sbjct: 782 LLFLTGQEEIDFACQSL 798
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 72/131 (54%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L +LP+Y+ LP+ Q R+F+ +R VVVATN+AE SLTI GI YV+D G K Y+
Sbjct: 812 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 871
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
G+++ + I PG CYRLY+ +A+ NE S E++++ +
Sbjct: 872 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG 931
Query: 544 GVVLLLKSMHI 554
L +K+M I
Sbjct: 932 MTTLSMKAMGI 942
>Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/257 (43%), Positives = 163/257 (63%), Gaps = 33/257 (12%)
Query: 2 MEQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAV 61
+++E+++A+ D+ +++ GETG GKTTQV Q+L EAGY + G IG TQPRRVA
Sbjct: 575 LKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT------RGKIGCTQPRRVAA 628
Query: 62 LATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVII 121
++ AKRVA E G RLG+EVG+ +R++ G IK+MTDG+LLRE+ D LS+YSVI+
Sbjct: 629 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIM 688
Query: 122 LDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATL 181
LDEAHER+++TD+L G+L +++K R PE L+L++ SATL
Sbjct: 689 LDEAHERTIHTDVLFGLLKQLVKRR------------------PE-----LRLIVTSATL 725
Query: 182 RVQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGI 241
+ F SG F+ + +P R FPV + + ++ E +DY+ A+ VL IH P G I
Sbjct: 726 DAEKF-SGYFFNC--NIFTIPGRTFPVEILYTKQPE-SDYLDASLITVLQIHLTEPEGDI 781
Query: 242 LVFVTGQREVEDLCRKL 258
L+F+TGQ E++ C+ L
Sbjct: 782 LLFLTGQEEIDFACQSL 798
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 72/131 (54%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L +LP+Y+ LP+ Q R+F+ +R VVVATN+AE SLTI GI YV+D G K Y+
Sbjct: 812 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 871
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
G+++ + I PG CYRLY+ +A+ NE S E++++ +
Sbjct: 872 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG 931
Query: 544 GVVLLLKSMHI 554
L +K+M I
Sbjct: 932 MTTLSMKAMGI 942
>Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 161/264 (60%), Gaps = 33/264 (12%)
Query: 5 EIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLAT 64
E+++A+ DH ++I GETG GKTTQ+PQ+L+EAGY +G+I TQPRRVA ++
Sbjct: 420 ELLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGY------TKHGMIACTQPRRVAAMSV 473
Query: 65 AKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDE 124
A RVA+ELG++LG EVG+ +R++ + +K+MTDG+LLRE + L+ YSV+++DE
Sbjct: 474 AARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLASYSVVMVDE 533
Query: 125 AHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQ 184
AHER+L+TDIL ++ I + R P+ LKL++ SATL +
Sbjct: 534 AHERTLSTDILFALVKDISRFR------------------PD-----LKLLISSATLDAE 570
Query: 185 DFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGILVF 244
F+ + P+ ++P R++PV ++F + E DY+ AA L IH PPG IL+F
Sbjct: 571 KFSD---YFDSAPIFKIPGRRYPVEIHFTKAPE-ADYLDAAIVTALQIHVTQPPGDILIF 626
Query: 245 VTGQREVEDLCRKLRKASKEFVTK 268
+TGQ E+E L+ ++ TK
Sbjct: 627 LTGQEEIETAEEILKHRTRGLGTK 650
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 75/131 (57%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L + P+YA LP Q ++FE E R VV+ATN+AETSLTI GIKYV+D G K+K Y+
Sbjct: 654 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYN 713
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
GME+ V I PG C+RLY++ F N+ D + E+++ +
Sbjct: 714 PKTGMESLLVSPISKASAMQRAGRSGRTGPGKCFRLYTAYNFQNDLDDNTVPEIQRTNLT 773
Query: 544 GVVLLLKSMHI 554
VVL LKS+ I
Sbjct: 774 NVVLTLKSLGI 784
>Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 161/264 (60%), Gaps = 33/264 (12%)
Query: 5 EIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLAT 64
E+++A+ DH ++I GETG GKTTQ+PQ+L+EAGY +G+I TQPRRVA ++
Sbjct: 420 ELLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGY------TKHGMIACTQPRRVAAMSV 473
Query: 65 AKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDE 124
A RVA+ELG++LG EVG+ +R++ + +K+MTDG+LLRE + L+ YSV+++DE
Sbjct: 474 AARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLASYSVVMVDE 533
Query: 125 AHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQ 184
AHER+L+TDIL ++ I + R P+ LKL++ SATL +
Sbjct: 534 AHERTLSTDILFALVKDISRFR------------------PD-----LKLLISSATLDAE 570
Query: 185 DFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGILVF 244
F+ + P+ ++P R++PV ++F + E DY+ AA L IH PPG IL+F
Sbjct: 571 KFSD---YFDSAPIFKIPGRRYPVEIHFTKAPE-ADYLDAAIVTALQIHVTQPPGDILIF 626
Query: 245 VTGQREVEDLCRKLRKASKEFVTK 268
+TGQ E+E L+ ++ TK
Sbjct: 627 LTGQEEIETAEEILKHRTRGLGTK 650
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 75/131 (57%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L + P+YA LP Q ++FE E R VV+ATN+AETSLTI GIKYV+D G K+K Y+
Sbjct: 654 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYN 713
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
GME+ V I PG C+RLY++ F N+ D + E+++ +
Sbjct: 714 PKTGMESLLVSPISKASAMQRAGRSGRTGPGKCFRLYTAYNFQNDLDDNTVPEIQRTNLT 773
Query: 544 GVVLLLKSMHI 554
VVL LKS+ I
Sbjct: 774 NVVLTLKSLGI 784
>Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 161/264 (60%), Gaps = 33/264 (12%)
Query: 5 EIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLAT 64
E+++A+ DH ++I GETG GKTTQ+PQ+L+EAGY +G+I TQPRRVA ++
Sbjct: 420 ELLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGY------TKHGMIACTQPRRVAAMSV 473
Query: 65 AKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDE 124
A RVA+ELG++LG EVG+ +R++ + +K+MTDG+LLRE + L+ YSV+++DE
Sbjct: 474 AARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFLGEPDLASYSVVMVDE 533
Query: 125 AHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQ 184
AHER+L+TDIL ++ I + R P+ LKL++ SATL +
Sbjct: 534 AHERTLSTDILFALVKDISRFR------------------PD-----LKLLISSATLDAE 570
Query: 185 DFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGILVF 244
F+ + P+ ++P R++PV ++F + E DY+ AA L IH PPG IL+F
Sbjct: 571 KFSD---YFDSAPIFKIPGRRYPVEIHFTKAPE-ADYLDAAIVTALQIHVTQPPGDILIF 626
Query: 245 VTGQREVEDLCRKLRKASKEFVTK 268
+TGQ E+E L+ ++ TK
Sbjct: 627 LTGQEEIETAEEILKHRTRGLGTK 650
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 75/131 (57%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L + P+YA LP Q ++FE E R VV+ATN+AETSLTI GIKYV+D G K+K Y+
Sbjct: 654 LIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYN 713
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
GME+ V I PG C+RLY++ F N+ D + E+++ +
Sbjct: 714 PKTGMESLLVSPISKASAMQRAGRSGRTGPGKCFRLYTAYNFQNDLDDNTVPEIQRTNLT 773
Query: 544 GVVLLLKSMHI 554
VVL LKS+ I
Sbjct: 774 NVVLTLKSLGI 784
>Medtr3g070430.1 | ATP-dependent RNA helicase, putative | LC |
chr3:31600542-31602720 | 20130731
Length = 497
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 139/222 (62%), Gaps = 23/222 (10%)
Query: 353 SKNKNNIVDVLGQEGSLASLKAAFENLYGQAPLSSSNGERAISVNTGNELDQPKVVSEKM 412
S+NK++I+D LG+EGS+ SLK AFE L GQAPL+SSN SVNT LD+ KV SEK+
Sbjct: 93 SENKSDILDALGKEGSIVSLKDAFEKLSGQAPLNSSNEMTTFSVNTEEGLDKSKVCSEKI 152
Query: 413 AKENCSPSPGPLFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVV 472
A+E+ SPSPG LFVL LYA+LPAAAQLR+FEGVKE +RLVVVATNVAE
Sbjct: 153 ARESHSPSPGALFVLELYAVLPAAAQLRLFEGVKEGKRLVVVATNVAEN----------- 201
Query: 473 DTGREKVKKYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDY 532
YDSSNGMETYEVQWI P + FNNEFP+Y
Sbjct: 202 ---------YDSSNGMETYEVQWISKPVRHLFLNMQAELKPDTVI-VSILPEFNNEFPEY 251
Query: 533 SPAEVEKVPVHGVVLLLKSMHIKKV-GYIFSFYLSFHSTCFL 573
SPAEV+KV G V LKSMHIKKV Y+ F S T L
Sbjct: 252 SPAEVKKVSALGAV-PLKSMHIKKVFCYMLPFPTSLKVTSLL 292
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 27/94 (28%)
Query: 138 MLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQDFTSGRLFHTPPP 197
M+ R++ Q+ Y++QQ +ILSG + DFTSG +F TP P
Sbjct: 1 MVVRVL--LQQIYNKQQNIILSG---------------------EIHDFTSGSVFQTPQP 37
Query: 198 VIEVPTRQFPVTVYFARKTEKTDY----IGAAYK 227
VIE+PT +FP TVYFA+KTEKTD+ IG ++K
Sbjct: 38 VIEIPTSKFPGTVYFAKKTEKTDFSVQPIGRSWK 71
>Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC |
chr7:38011601-38003021 | 20130731
Length = 725
Score = 199 bits (507), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/312 (35%), Positives = 176/312 (56%), Gaps = 34/312 (10%)
Query: 2 MEQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNG-IIGVTQPRRVA 60
+E+ ++E + + +II GETG GKTTQ+PQFL+ AG+ H+G ++G+TQPRRVA
Sbjct: 53 VEKRLIEEVQKNDILIIVGETGSGKTTQIPQFLFHAGF------CHDGKVVGITQPRRVA 106
Query: 61 VLATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVI 120
+ AKRVA E G LG++VG+ VR+D S IK+MTDG+LLRE D LS+YSVI
Sbjct: 107 AITVAKRVAEECGYELGQKVGYSVRFDDSTSNSTRIKYMTDGLLLREALLDPYLSKYSVI 166
Query: 121 ILDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVF---------- 170
I+DEAHER+++TD+L+G+L ++ R + + L G + +
Sbjct: 167 IVDEAHERTVHTDVLMGLLKKVQHARSNSIKDGRN--LDNGNKNTNGFMLLDKDNGQNGS 224
Query: 171 -----------PLKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKT 219
PLKL++MSA+L + F+ + + + RQFPV +++ R+ E T
Sbjct: 225 FLRKGHREKSSPLKLIIMSASLDARTFSE---YFGGAKAVHIQGRQFPVDIFYTRRPE-T 280
Query: 220 DYIGAAYKKVLTIHKRLPPGGILVFVTGQREVEDLCRKLRKASKEFVTKKLKGSVINDST 279
DY+ AA + +H+ PG ILVF+TGQ E++ + R +++ + + K V+
Sbjct: 281 DYVDAALITIFQVHQDEAPGDILVFLTGQEEIDAVERLIKERLSKLPQENQKLQVLPIYA 340
Query: 280 VVPETNSVEGID 291
+P + +
Sbjct: 341 ALPSEQQMRAFE 352
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Query: 410 EKMAKENCSPSPG---PLFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIP 466
E++ KE S P L VLP+YA LP+ Q+R FE R V++ATN+AETS+TIP
Sbjct: 316 ERLIKERLSKLPQENQKLQVLPIYAALPSEQQMRAFEPAPSGFRKVILATNIAETSITIP 375
Query: 467 GIKYVVDTGREKVKKYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFN 526
GIK+V+D G K + YD GME+ V PG C+RLY F
Sbjct: 376 GIKHVIDPGLVKARSYDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPENEF- 434
Query: 527 NEFPDYSPAEVEKVPVHGVVLLLKSMHIKKV-GYIF 561
+ D + E+++ + V+L LK++ + + G+ F
Sbjct: 435 EKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDF 470
>Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr1:38781865-38776805 | 20130731
Length = 721
Score = 198 bits (504), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 159/258 (61%), Gaps = 27/258 (10%)
Query: 3 EQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVL 62
+++ ++ + D+ +I+ GETG GKTTQ+PQF+ EA + +I TQPRRVA +
Sbjct: 63 KEDFLKVLKDNQTLILVGETGSGKTTQIPQFVLEAVELEAPDKRKKMMIACTQPRRVAAM 122
Query: 63 ATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIIL 122
+ ++RVA E+ + +G+EVG+ +R++ +K++TDG+LLRE D LL RY VIIL
Sbjct: 123 SVSRRVAEEMDVSIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIIL 182
Query: 123 DEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLR 182
DEAHER+L TD+L G+L ++K R P+ LKLV+MSATL
Sbjct: 183 DEAHERTLATDVLFGLLKEVLKNR------------------PD-----LKLVVMSATLE 219
Query: 183 VQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGIL 242
+ F G F P+++VP R PV +++ ++ E+ DY+ AA + V+ IH P G IL
Sbjct: 220 AEKF-QGYFFGA--PLMKVPGRLHPVEIFYTQEPER-DYLEAAIRTVVQIHMCEPAGDIL 275
Query: 243 VFVTGQREVEDLCRKLRK 260
VF+TG+ E+ED CRK+ K
Sbjct: 276 VFLTGEEEIEDACRKISK 293
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 84/162 (51%), Gaps = 10/162 (6%)
Query: 411 KMAKE--NCSPSPGPLFVLPLYAMLPAAAQLRVFEG----VKE---EERLVVVATNVAET 461
K++KE N GP+ +PLY+ LP A Q ++FE VKE R +VV+TN+AET
Sbjct: 290 KISKEVANMGDQVGPVKAVPLYSTLPPAMQQKIFEPAPPPVKEGGPPGRKIVVSTNIAET 349
Query: 462 SLTIPGIKYVVDTGREKVKKYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYS 521
SLTI GI YV+D G K K Y+ +E+ V I PG C+RLY+
Sbjct: 350 SLTIDGIVYVIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 409
Query: 522 SAAFNNEFPDYSPAEVEKVPVHGVVLLLKSMHIKKVGYIFSF 563
+FNN+ + E+ + + VL LK + I + + F F
Sbjct: 410 ERSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH-FDF 450
>Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:51667204-51673502 | 20130731
Length = 1154
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 158/256 (61%), Gaps = 33/256 (12%)
Query: 8 EAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATAKR 67
EA+ D+ +++ GETG GKTTQV Q+L E GY + G IG TQPRRVA ++ AKR
Sbjct: 512 EAVHDNQVLVVIGETGSGKTTQVTQYLAEVGYTT------RGKIGCTQPRRVAAMSVAKR 565
Query: 68 VAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDEAHE 127
VA E G RLG+EVG+ +R++ G IK+MTDG+LLRE+ D LS+YSVI+LDEAHE
Sbjct: 566 VAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDESLSQYSVIMLDEAHE 625
Query: 128 RSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQDFT 187
R++ TD+L G+L +++K R PE L+L++ SATL + F
Sbjct: 626 RTIYTDVLFGLLKQLVKRR------------------PE-----LRLIVTSATLDAEKF- 661
Query: 188 SGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGILVFVTG 247
SG F+ + +P R FPV + +A++ E +DY+ A+ VL IH P G IL+F+TG
Sbjct: 662 SGYFFNC--NIFTIPGRTFPVEILYAKQPE-SDYLDASLITVLQIHLTEPEGDILLFLTG 718
Query: 248 QREVEDLCRKLRKASK 263
Q E++ C+ L + K
Sbjct: 719 QEEIDFACQSLHERMK 734
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L +LP+Y+ LP+ Q R+F+ +R VVVATN+AE SLTI GI YV+D G K Y+
Sbjct: 743 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 802
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
G+++ + I PG CYRLY+ +A+ NE + E++++ +
Sbjct: 803 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTAIPEIQRINLG 862
Query: 544 GVVLLLKSMHI 554
L +K+M I
Sbjct: 863 MTTLSMKAMGI 873
>Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr5:31994096-31996650 | 20130731
Length = 808
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 159/267 (59%), Gaps = 32/267 (11%)
Query: 2 MEQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAV 61
+ E ++A+ DH ++I GETG GKTTQ+PQ+L+EAGY +I TQPRRVA
Sbjct: 214 FKDEFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYTKD-----GRMIACTQPRRVAA 268
Query: 62 LATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVII 121
++ A RV+ E+G++LG EVG+ +R++ E +K+MTDG+LLRE L YSV++
Sbjct: 269 MSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTIVKYMTDGMLLREFLTQPELDSYSVVM 328
Query: 122 LDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATL 181
+DEAHER+L+TDIL G++ + + R P+ LKL++ SATL
Sbjct: 329 VDEAHERTLSTDILFGLVKDVARAR------------------PD-----LKLLISSATL 365
Query: 182 RVQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGI 241
+ F++ + P+ ++P R++PV ++++ KT ++Y+ AA L IH PPG I
Sbjct: 366 DAEKFSN---YFDLAPIFKIPGRRYPVEIHYS-KTAVSNYMDAAIVTTLQIHATQPPGDI 421
Query: 242 LVFVTGQREVEDLCRKLRKASKEFVTK 268
LVF+ GQ E+E + L+ + TK
Sbjct: 422 LVFLAGQEEIESVEENLKYQMRGLGTK 448
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 74/129 (57%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L + P+YA LP Q R+FE + R VV+ATN+AETSLTI GIKYV+D G K+K Y+
Sbjct: 452 LIICPIYANLPTELQARIFEPTPKGARKVVLATNIAETSLTIDGIKYVIDPGFFKMKCYN 511
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
GME+ V I PG C+RLY++ +F N+ D + E+++ +
Sbjct: 512 PRTGMESLLVTPISKASAMQRAGRSGRTGPGKCFRLYTAYSFQNDLDDNTTPEIQRTNLA 571
Query: 544 GVVLLLKSM 552
VVL L S+
Sbjct: 572 NVVLTLNSL 580
>Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 768
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 147/248 (59%), Gaps = 32/248 (12%)
Query: 5 EIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLAT 64
+ ++A+ DH ++I GETG GKTTQ+PQ+L+EAGY H +I TQPRRVA ++
Sbjct: 262 KFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYTK-----HGKMIACTQPRRVAAMSV 316
Query: 65 AKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDE 124
A RV+ E+G++LG EVG+ +R++ + +K+MTDG+LLRE L YSV+++DE
Sbjct: 317 AARVSQEMGVKLGHEVGYSIRFEDCTSKKTIVKYMTDGMLLREFLAQPELDSYSVVMVDE 376
Query: 125 AHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQ 184
AHER+L+TDIL G+L + + R P+ LKL++ SATL +
Sbjct: 377 AHERTLSTDILFGLLKDVARAR------------------PD-----LKLLISSATLDAE 413
Query: 185 DFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGILVF 244
F + F E+P R +PV ++F K E +Y AA L IH PPG IL+F
Sbjct: 414 KFIN---FFDHAQKFEIPGRPYPVEIHFTEKAE-ANYFDAAIVTTLQIHTTQPPGDILLF 469
Query: 245 VTGQREVE 252
+TGQ E+E
Sbjct: 470 LTGQEEIE 477
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 80/140 (57%), Gaps = 1/140 (0%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L + P+YA LP Q ++FE + R VV+ATN+AETSLTI GIKYV+D G K+K Y+
Sbjct: 497 LIICPIYANLPTEIQAKIFEPTPKGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYN 556
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
GME+ V I PG C+RLY+S +F N+ D + E+++ +
Sbjct: 557 PRTGMESLLVTPISKASAMQRAGRSGRTGPGKCFRLYTSYSFQNDMEDNTTPEIQRTNLA 616
Query: 544 GVVLLLKSMHIKKVGYIFSF 563
VVL L S+ I ++ +F F
Sbjct: 617 NVVLTLISLGI-EIEKLFQF 635
>Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 587
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 147/248 (59%), Gaps = 32/248 (12%)
Query: 5 EIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLAT 64
+ ++A+ DH ++I GETG GKTTQ+PQ+L+EAGY H +I TQPRRVA ++
Sbjct: 262 KFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYTK-----HGKMIACTQPRRVAAMSV 316
Query: 65 AKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDE 124
A RV+ E+G++LG EVG+ +R++ + +K+MTDG+LLRE L YSV+++DE
Sbjct: 317 AARVSQEMGVKLGHEVGYSIRFEDCTSKKTIVKYMTDGMLLREFLAQPELDSYSVVMVDE 376
Query: 125 AHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQ 184
AHER+L+TDIL G+L + + R P+ LKL++ SATL +
Sbjct: 377 AHERTLSTDILFGLLKDVARAR------------------PD-----LKLLISSATLDAE 413
Query: 185 DFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGILVF 244
F + F E+P R +PV ++F K E +Y AA L IH PPG IL+F
Sbjct: 414 KFIN---FFDHAQKFEIPGRPYPVEIHFTEKAE-ANYFDAAIVTTLQIHTTQPPGDILLF 469
Query: 245 VTGQREVE 252
+TGQ E+E
Sbjct: 470 LTGQEEIE 477
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L + P+YA LP Q ++FE + R VV+ATN+AETSLTI GIKYV+D G K+K Y+
Sbjct: 497 LIICPIYANLPTEIQAKIFEPTPKGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYN 556
Query: 484 SSNGMET 490
GME+
Sbjct: 557 PRTGMES 563
>Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 904
Score = 192 bits (487), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 147/248 (59%), Gaps = 32/248 (12%)
Query: 5 EIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLAT 64
+ ++A+ DH ++I GETG GKTTQ+PQ+L+EAGY H +I TQPRRVA ++
Sbjct: 262 KFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYTK-----HGKMIACTQPRRVAAMSV 316
Query: 65 AKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDE 124
A RV+ E+G++LG EVG+ +R++ + +K+MTDG+LLRE L YSV+++DE
Sbjct: 317 AARVSQEMGVKLGHEVGYSIRFEDCTSKKTIVKYMTDGMLLREFLAQPELDSYSVVMVDE 376
Query: 125 AHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQ 184
AHER+L+TDIL G+L + + R P+ LKL++ SATL +
Sbjct: 377 AHERTLSTDILFGLLKDVARAR------------------PD-----LKLLISSATLDAE 413
Query: 185 DFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGILVF 244
F + F E+P R +PV ++F K E +Y AA L IH PPG IL+F
Sbjct: 414 KFIN---FFDHAQKFEIPGRPYPVEIHFTEKAE-ANYFDAAIVTTLQIHTTQPPGDILLF 469
Query: 245 VTGQREVE 252
+TGQ E+E
Sbjct: 470 LTGQEEIE 477
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 80/140 (57%), Gaps = 1/140 (0%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L + P+YA LP Q ++FE + R VV+ATN+AETSLTI GIKYV+D G K+K Y+
Sbjct: 497 LIICPIYANLPTEIQAKIFEPTPKGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYN 556
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
GME+ V I PG C+RLY+S +F N+ D + E+++ +
Sbjct: 557 PRTGMESLLVTPISKASAMQRAGRSGRTGPGKCFRLYTSYSFQNDMEDNTTPEIQRTNLA 616
Query: 544 GVVLLLKSMHIKKVGYIFSF 563
VVL L S+ I ++ +F F
Sbjct: 617 NVVLTLISLGI-EIEKLFQF 635
>Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490015-34479594 | 20130731
Length = 697
Score = 190 bits (482), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 154/256 (60%), Gaps = 35/256 (13%)
Query: 3 EQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVL 62
E++I+E + ++S +I GETG GK+TQ+ Q L+ GY I VTQPRRVA +
Sbjct: 10 EEKIIETVENNSITVIIGETGSGKSTQLSQMLHRRGYSK---------IAVTQPRRVAAV 60
Query: 63 ATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIIL 122
+ ++RVA ELG++LG+EVG+ +R++ + + IK++TDG+LLRE D L+ YSVIIL
Sbjct: 61 SVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVLLRESLADPELNDYSVIIL 120
Query: 123 DEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLR 182
DEAHERSLNTDIL+G++ R++K R LK+++ SATL
Sbjct: 121 DEAHERSLNTDILMGLMKRLVKIRSS----------------------NLKVLITSATL- 157
Query: 183 VQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGIL 242
D F PV+ +P + +PV V ++ K +Y+ AA K L IH R P G IL
Sbjct: 158 --DGDKVSKFFRDCPVLNIPGKLYPVEVLYS-KERPVNYLDAALKTALDIHIRQPEGDIL 214
Query: 243 VFVTGQREVEDLCRKL 258
+F+TGQ ++E L K+
Sbjct: 215 IFMTGQDDIEKLVMKM 230
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Query: 425 FVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYDS 484
+ PL+ LP Q+RVF R ++VATN+AETSLT+ G+ YV+D+G K ++Y+
Sbjct: 246 IIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNP 305
Query: 485 SNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVHG 544
S+ M + +V I PG CYRLY S +++EF D + E+++ + G
Sbjct: 306 SSRMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSQIYHDEFLDVTVPEIQRSSLAG 365
Query: 545 VVLLLKSMHIKKVGYI-FSF 563
VL LKS+ + + + F F
Sbjct: 366 SVLYLKSLDLPDIDILKFDF 385
>Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490000-34479591 | 20130731
Length = 589
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 154/256 (60%), Gaps = 35/256 (13%)
Query: 3 EQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVL 62
E++I+E + ++S +I GETG GK+TQ+ Q L+ GY I VTQPRRVA +
Sbjct: 10 EEKIIETVENNSITVIIGETGSGKSTQLSQMLHRRGYSK---------IAVTQPRRVAAV 60
Query: 63 ATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIIL 122
+ ++RVA ELG++LG+EVG+ +R++ + + IK++TDG+LLRE D L+ YSVIIL
Sbjct: 61 SVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVLLRESLADPELNDYSVIIL 120
Query: 123 DEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLR 182
DEAHERSLNTDIL+G++ R++K R LK+++ SATL
Sbjct: 121 DEAHERSLNTDILMGLMKRLVKIRSS----------------------NLKVLITSATL- 157
Query: 183 VQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGIL 242
D F PV+ +P + +PV V ++ K +Y+ AA K L IH R P G IL
Sbjct: 158 --DGDKVSKFFRDCPVLNIPGKLYPVEVLYS-KERPVNYLDAALKTALDIHIRQPEGDIL 214
Query: 243 VFVTGQREVEDLCRKL 258
+F+TGQ ++E L K+
Sbjct: 215 IFMTGQDDIEKLVMKM 230
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Query: 425 FVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYDS 484
+ PL+ LP Q+RVF R ++VATN+AETSLT+ G+ YV+D+G K ++Y+
Sbjct: 246 IIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNP 305
Query: 485 SNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVHG 544
S+ M + +V I PG CYRLY S +++EF D + E+++ + G
Sbjct: 306 SSRMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSQIYHDEFLDVTVPEIQRSSLAG 365
Query: 545 VVLLLKSMHIKKVGYI-FSF 563
VL LKS+ + + + F F
Sbjct: 366 SVLYLKSLDLPDIDILKFDF 385
>Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34489993-34479594 | 20130731
Length = 647
Score = 189 bits (479), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 106/256 (41%), Positives = 154/256 (60%), Gaps = 35/256 (13%)
Query: 3 EQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVL 62
E++I+E + ++S +I GETG GK+TQ+ Q L+ GY I VTQPRRVA +
Sbjct: 10 EEKIIETVENNSITVIIGETGSGKSTQLSQMLHRRGYSK---------IAVTQPRRVAAV 60
Query: 63 ATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIIL 122
+ ++RVA ELG++LG+EVG+ +R++ + + IK++TDG+LLRE D L+ YSVIIL
Sbjct: 61 SVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVLLRESLADPELNDYSVIIL 120
Query: 123 DEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLR 182
DEAHERSLNTDIL+G++ R++K R LK+++ SATL
Sbjct: 121 DEAHERSLNTDILMGLMKRLVKIRSS----------------------NLKVLITSATL- 157
Query: 183 VQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGIL 242
D F PV+ +P + +PV V ++ K +Y+ AA K L IH R P G IL
Sbjct: 158 --DGDKVSKFFRDCPVLNIPGKLYPVEVLYS-KERPVNYLDAALKTALDIHIRQPEGDIL 214
Query: 243 VFVTGQREVEDLCRKL 258
+F+TGQ ++E L K+
Sbjct: 215 IFMTGQDDIEKLVMKM 230
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Query: 425 FVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYDS 484
+ PL+ LP Q+RVF R ++VATN+AETSLT+ G+ YV+D+G K ++Y+
Sbjct: 246 IIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNP 305
Query: 485 SNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVHG 544
S+ M + +V I PG CYRLY S +++EF D + E+++ + G
Sbjct: 306 SSRMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSQIYHDEFLDVTVPEIQRSSLAG 365
Query: 545 VVLLLKSMHIKKVGYI-FSF 563
VL LKS+ + + + F F
Sbjct: 366 SVLYLKSLDLPDIDILKFDF 385
>Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC |
chr2:4513881-4525364 | 20130731
Length = 701
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 152/248 (61%), Gaps = 16/248 (6%)
Query: 6 IMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATA 65
I+ + HS II GETG GKTTQ+PQ+L EAG+ S +I TQPRR+AV A +
Sbjct: 62 ILYLVETHSTTIIVGETGSGKTTQIPQYLIEAGWASG-----GRLIACTQPRRLAVQAVS 116
Query: 66 KRVAYELGLRLGKEVGFQVRYDKKIGESCSI-KFMTDGILLRELQNDILLSRYSVIILDE 124
RVA E+G++LG +VG+ +R++ + ++ KF+TDG+LLRE+ ND LL++YSV+++DE
Sbjct: 117 SRVAQEMGVKLGDQVGYTIRFEDVTNQDETVLKFVTDGVLLREMMNDPLLTKYSVVMVDE 176
Query: 125 AHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQ 184
AHERS++TDIL+G+L +I K R + ++I++ TI + M + R +
Sbjct: 177 AHERSISTDILLGLLKKIQKRRPEL-----RLIIASATIEAKSMADFFR----PRKKRRE 227
Query: 185 DFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGILVF 244
P ++ V R F V + FA + + DY+ AA VL IH+R G +LVF
Sbjct: 228 PENDVNGLKVEPAILSVEGRGFNVQINFAEEPVQ-DYVQAAVSTVLLIHERESTGDVLVF 286
Query: 245 VTGQREVE 252
+TGQ +++
Sbjct: 287 LTGQDDID 294
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 388 SNGERAISVNTGNELDQPKVVSEKMAKENCSPSPGPLFVLPLYAMLPAAAQLRVFEGVKE 447
S G+ + + +++D + + + N S G L VLPLY+ LP A Q VF
Sbjct: 279 STGDVLVFLTGQDDIDAAVHLFNEEIQNNRKHSSG-LVVLPLYSGLPRADQELVFSPAPR 337
Query: 448 EERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYDSSNGMETYEVQWIXXXXXXXXXXX 507
+R VV++TN+AETSLT+ GI YVVD+G K + Y+ + +E V I
Sbjct: 338 GKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISRASARQRAGR 397
Query: 508 XXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVHGVVLLLKSMHIKKV 557
PG CYRLY+ F N + E+++ + V+ LK++ I +
Sbjct: 398 AGRVRPGKCYRLYTEEFFLNHMSNEGIPEIQRSNLVSCVIQLKALGIDNI 447
>Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:20814127-20817509 | 20130731
Length = 715
Score = 176 bits (447), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 162/306 (52%), Gaps = 59/306 (19%)
Query: 3 EQEIMEAITDHSHVIICGETGCGKTTQ--------------------------VPQFLYE 36
+ + ++ D+ +I+ GETG GKTTQ +PQF+ E
Sbjct: 60 KDDFLQFFKDNQILILVGETGSGKTTQLSFCNLILLTMRRRCHGTEAPDFFMHIPQFVLE 119
Query: 37 AGYGSSKSHVHNGIIGVTQPRRVAVLATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSI 96
A + +I TQPRRVA ++ ++RVA E+ + +G+EVG+ +R++ +
Sbjct: 120 AVDLETPDKHKKMMIACTQPRRVAAMSVSRRVAEEMDVSIGEEVGYSIRFEDCSSAKTVL 179
Query: 97 KFMTDGILLRELQNDILLSRYSVIILDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKV 156
KF+TDG+LLRE D LL RY VIILDEAHER+L TD+L G+L ++K R
Sbjct: 180 KFLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNR---------- 229
Query: 157 ILSGGTISPEKMVFPLKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKT 216
P+ LKLV+MSATL + F S + P+++V R PV +++ ++
Sbjct: 230 --------PD-----LKLVVMSATLEAEKFKS---YFLGAPLMKVRGRLHPVKIFYTKEP 273
Query: 217 EKTDYIGAAYKKVLTIHKRLPPGGILVFVTGQREVEDLCRKLRKASKEFVTKKLKGSVIN 276
E TDY+ AA + IH P G +LVF+TG+ E+ED CRK+ S E ++G +
Sbjct: 274 E-TDYLEAAIWTAVQIHTLEPAGDVLVFLTGEEEIEDACRKI---SNEVA---IRGDTVG 326
Query: 277 DSTVVP 282
VVP
Sbjct: 327 PVKVVP 332
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 8/149 (5%)
Query: 422 GPLFVLPLYAMLPAAAQLRVFEG----VKE---EERLVVVATNVAETSLTIPGIKYVVDT 474
GP+ V+PLY+ LP A Q R+FE V+E R ++V+TN+AETSLTI GI YVVD
Sbjct: 326 GPVKVVPLYSTLPPAMQHRIFEPAPPPVREGGLPGRKILVSTNIAETSLTINGIVYVVDP 385
Query: 475 GREKVKKYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSP 534
G K K Y+ +E+ V I PG C+RLY+ +FNN+ +
Sbjct: 386 GLAKQKVYNPRARVESLLVSPISKASAVQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTY 445
Query: 535 AEVEKVPVHGVVLLLKSMHIKKVGYIFSF 563
E+ + + VL LK + I + + F F
Sbjct: 446 PEILRSNLANTVLTLKKLGIDDLVH-FDF 473
>Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr4:33389635-33387508 | 20130731
Length = 683
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 140/232 (60%), Gaps = 27/232 (11%)
Query: 27 TTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATAKRVAYELGLRLGKEVGFQVRY 86
TTQ+PQF+ EA ++ ++ TQPRRVA L+ ++RVA E+ + +G+EVG+ +R+
Sbjct: 49 TTQIPQFVLEAVDLETRDKHRKMMVACTQPRRVAALSVSRRVAEEMDVSIGEEVGYSIRF 108
Query: 87 DKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDEAHERSLNTDILIGMLSRIIKTR 146
+ +K++TDG+LLRE D LL RY VIILDEAHER+L TD+L G+L I++ R
Sbjct: 109 EDCSSSRTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDLLFGLLKEILRNR 168
Query: 147 QKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQF 206
LKLV+MSATL + F S + P+++VP R
Sbjct: 169 TD-----------------------LKLVVMSATLEAEKFKS---YFFGAPLMKVPGRLH 202
Query: 207 PVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGILVFVTGQREVEDLCRKL 258
PV + + ++ ++ +Y+ AA KV+ IH + P G ILVF+TG+ E+ED CRK+
Sbjct: 203 PVEIRYEKEPQR-EYLEAAITKVVEIHTKEPAGDILVFLTGEEEIEDACRKI 253
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 403 DQPKVVSEKMAKENCSPSPGPLFVLPLYAMLPAAAQLRVFEG----VKE---EERLVVVA 455
D + +S K+A N GP+ VL LY+ LP A Q ++FE VKE R +VV+
Sbjct: 248 DACRKISNKVA--NLGEKVGPVKVLSLYSTLPPAMQQKIFEPAPPPVKEGGLPGRKIVVS 305
Query: 456 TNVAETSLTIPGIKYVVDTGREKVKKYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGH 515
TN+AETSLTI GI YV+D G K K Y+ +E+ V I PG
Sbjct: 306 TNIAETSLTIDGIVYVIDPGFAKQKVYNPRTRVESLLVSPISKASAHQRSGRAGRTQPGK 365
Query: 516 CYRLYSSAAFNNEFPDYSPAEVEKVPVHGVVLLLKSMHIKKVGYIFSF 563
CYRLY+ +F+N+ + E+ + + VL LK + I + + F F
Sbjct: 366 CYRLYTEISFSNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVH-FDF 412
>Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr8:15840782-15843798 | 20130731
Length = 650
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 137/264 (51%), Gaps = 64/264 (24%)
Query: 5 EIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLAT 64
E ++A+ DH ++I GETG GKTTQ+PQ+L+EAGY H ++ TQPRRVA ++
Sbjct: 114 EFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYIK-----HGRMLACTQPRRVAAMSV 168
Query: 65 AKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDE 124
A RV+ E+G++LG E L YSVI++DE
Sbjct: 169 AARVSEEMGVKLGHEPE--------------------------------LDSYSVIMVDE 196
Query: 125 AHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQ 184
AHER+L+TDIL G++ + +TR P+ LKL++ SATL +
Sbjct: 197 AHERTLSTDILFGLVKDVARTR------------------PD-----LKLLISSATLDAK 233
Query: 185 DFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVLTIHKRLPPGGILVF 244
F++ + P+ ++P R++PV ++F + E DY+ AA L IH P ILVF
Sbjct: 234 KFSN---YFDLAPIFKIPGRRYPVEIHFTKAPE-ADYLDAAIVTTLQIHATQSPREILVF 289
Query: 245 VTGQREVEDLCRKLRKASKEFVTK 268
++GQ E+E + L+ + TK
Sbjct: 290 LSGQEEIETVEEILKHRMRRLGTK 313
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L + P+YA LP Q ++FE E R VV+ATN+AET +TI GIKYV+D G K+ + D
Sbjct: 317 LIICPIYANLPTEPQAKIFEPTPEGARKVVLATNIAETPVTIDGIKYVIDPGFCKIFEND 376
Query: 484 SSNGMETYEVQ 494
+ T E+Q
Sbjct: 377 LEDDT-TPEIQ 386
>Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360105 | 20130731
Length = 1248
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 119/220 (54%), Gaps = 29/220 (13%)
Query: 3 EQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVL 62
++ I+ I+ + VII GETGCGKTTQ+PQF+ E+ S N I TQPRR++ +
Sbjct: 335 KEAILSVISKNQVVIISGETGCGKTTQIPQFILESEIESVHGAACNII--CTQPRRISAM 392
Query: 63 ATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIIL 122
+ ++RVA+E G +LG+ VG++VR + G+ + F T GILLR L D L + +I+
Sbjct: 393 SVSERVAFERGEKLGESVGYKVRLEGMKGKDTHLLFCTTGILLRRLLADRNLKGVTHVIV 452
Query: 123 DEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLR 182
DE HER +N D L+ +L ++ R PE LKL+LMSATL
Sbjct: 453 DEIHERGMNEDFLLIVLKELLPHR------------------PE-----LKLILMSATLD 489
Query: 183 VQDFTSGRLFHTPPPVIEVPTRQFPV-TVYFARKTEKTDY 221
+ F+ L+ P++ + PV T++ E T Y
Sbjct: 490 AELFS---LYFNGAPIVNILGFTHPVRTLFLENILEITGY 526
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 403 DQPKVVSEKMAKENCSPSPGPLFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETS 462
D + EK+ P + +L + + ++ Q +FE ++ R VV+ATN+AETS
Sbjct: 618 DDISSLKEKLQTHYVLGDPKRVLLLTCHGSMASSEQKLIFEEPEDGVRKVVLATNIAETS 677
Query: 463 LTIPGIKYVVDTGREKVKKYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSS 522
+T+ + +V+D G+ K YD+ N WI PG CY LY
Sbjct: 678 ITVDDVVFVLDCGKAKETSYDALNNTPCLLPTWISKASAHQRRGRAGRVQPGECYHLYPR 737
Query: 523 AAFNNEFPDYSPAEVEKVPVHGVVLLLKSMHIKKVGYIFS 562
+ + F +Y E+ + P+ + L +KS+ + + S
Sbjct: 738 CVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGSISDFLS 776
>Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360401 | 20130731
Length = 1222
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 114/210 (54%), Gaps = 28/210 (13%)
Query: 3 EQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVL 62
++ I+ I+ + VII GETGCGKTTQ+PQF+ E+ S N I TQPRR++ +
Sbjct: 335 KEAILSVISKNQVVIISGETGCGKTTQIPQFILESEIESVHGAACNII--CTQPRRISAM 392
Query: 63 ATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIIL 122
+ ++RVA+E G +LG+ VG++VR + G+ + F T GILLR L D L + +I+
Sbjct: 393 SVSERVAFERGEKLGESVGYKVRLEGMKGKDTHLLFCTTGILLRRLLADRNLKGVTHVIV 452
Query: 123 DEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLR 182
DE HER +N D L+ +L ++ R PE LKL+LMSATL
Sbjct: 453 DEIHERGMNEDFLLIVLKELLPHR------------------PE-----LKLILMSATLD 489
Query: 183 VQDFTSGRLFHTPPPVIEVPTRQFPVTVYF 212
+ F+ L+ P++ + PV F
Sbjct: 490 AELFS---LYFNGAPIVNILGFTHPVRTLF 516
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 1/160 (0%)
Query: 403 DQPKVVSEKMAKENCSPSPGPLFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETS 462
D + EK+ P + +L + + ++ Q +FE ++ R VV+ATN+AETS
Sbjct: 618 DDISSLKEKLQTHYVLGDPKRVLLLTCHGSMASSEQKLIFEEPEDGVRKVVLATNIAETS 677
Query: 463 LTIPGIKYVVDTGREKVKKYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSS 522
+T+ + +V+D G+ K YD+ N WI PG CY LY
Sbjct: 678 ITVDDVVFVLDCGKAKETSYDALNNTPCLLPTWISKASAHQRRGRAGRVQPGECYHLYPR 737
Query: 523 AAFNNEFPDYSPAEVEKVPVHGVVLLLKSMHIKKVGYIFS 562
+ + F +Y E+ + P+ + L +KS+ + + S
Sbjct: 738 CVY-DAFAEYQLPEILRTPLQSLCLQIKSLRLGSISDFLS 776
>Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 122/225 (54%), Gaps = 29/225 (12%)
Query: 6 IMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATA 65
++ ++++ +++ GETGCGKTTQ+PQ++ E+ +++ + N I TQPRR++ ++ +
Sbjct: 282 FLKVVSENQVIVVSGETGCGKTTQLPQYILESEIEAARGSLCNII--CTQPRRISAISVS 339
Query: 66 KRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDEA 125
+RVA E G +LG+ VG++VR + G + F T G+LLR L D L + +I+DE
Sbjct: 340 ERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEI 399
Query: 126 HERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQD 185
HER +N D L+ +L ++ R P+ L+L+LMSATL +
Sbjct: 400 HERGMNEDFLLIVLKDLLPRR------------------PD-----LRLILMSATLNAEL 436
Query: 186 FTSGRLFHTPPPVIEVPTRQFPVTVYFARKT-EKTDYIGAAYKKV 229
F+S + P I +P FPV F E+T Y Y ++
Sbjct: 437 FSS---YFDGAPTIHIPGFTFPVRAQFLEDILERTGYRLTPYNQI 478
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
+ +L + + ++ Q +FE R +V+ATN+AETS+TI + +VVD G+ K YD
Sbjct: 585 VLLLACHGSMSSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYD 644
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
+ N WI G CY LY + + F DY E+ + P+
Sbjct: 645 ALNNTPCLLPSWISKAAARQRKGRAGRVQSGECYHLYPRCVY-DAFADYQLPELLRTPLQ 703
Query: 544 GVVLLLKSMHIKKVGYIFSFYL 565
+ L +KS+ + + S L
Sbjct: 704 SLCLQIKSLQLGSISEFLSSAL 725
>Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 122/225 (54%), Gaps = 29/225 (12%)
Query: 6 IMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATA 65
++ ++++ +++ GETGCGKTTQ+PQ++ E+ +++ + N I TQPRR++ ++ +
Sbjct: 282 FLKVVSENQVIVVSGETGCGKTTQLPQYILESEIEAARGSLCNII--CTQPRRISAISVS 339
Query: 66 KRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDEA 125
+RVA E G +LG+ VG++VR + G + F T G+LLR L D L + +I+DE
Sbjct: 340 ERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEI 399
Query: 126 HERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQD 185
HER +N D L+ +L ++ R P+ L+L+LMSATL +
Sbjct: 400 HERGMNEDFLLIVLKDLLPRR------------------PD-----LRLILMSATLNAEL 436
Query: 186 FTSGRLFHTPPPVIEVPTRQFPVTVYFARKT-EKTDYIGAAYKKV 229
F+S + P I +P FPV F E+T Y Y ++
Sbjct: 437 FSS---YFDGAPTIHIPGFTFPVRAQFLEDILERTGYRLTPYNQI 478
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
+ +L + + ++ Q +FE R +V+ATN+AETS+TI + +VVD G+ K YD
Sbjct: 585 VLLLACHGSMSSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYD 644
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
+ N WI G CY LY + + F DY E+ + P+
Sbjct: 645 ALNNTPCLLPSWISKAAARQRKGRAGRVQSGECYHLYPRCVY-DAFADYQLPELLRTPLQ 703
Query: 544 GVVLLLKSMHIKKVGYIFSFYL 565
+ L +KS+ + + S L
Sbjct: 704 SLCLQIKSLQLGSISEFLSSAL 725
>Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 122/225 (54%), Gaps = 29/225 (12%)
Query: 6 IMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATA 65
++ ++++ +++ GETGCGKTTQ+PQ++ E+ +++ + N I TQPRR++ ++ +
Sbjct: 282 FLKVVSENQVIVVSGETGCGKTTQLPQYILESEIEAARGSLCNII--CTQPRRISAISVS 339
Query: 66 KRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDEA 125
+RVA E G +LG+ VG++VR + G + F T G+LLR L D L + +I+DE
Sbjct: 340 ERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEI 399
Query: 126 HERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQD 185
HER +N D L+ +L ++ R P+ L+L+LMSATL +
Sbjct: 400 HERGMNEDFLLIVLKDLLPRR------------------PD-----LRLILMSATLNAEL 436
Query: 186 FTSGRLFHTPPPVIEVPTRQFPVTVYFARKT-EKTDYIGAAYKKV 229
F+S + P I +P FPV F E+T Y Y ++
Sbjct: 437 FSS---YFDGAPTIHIPGFTFPVRAQFLEDILERTGYRLTPYNQI 478
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
+ +L + + ++ Q +FE R +V+ATN+AETS+TI + +VVD G+ K YD
Sbjct: 585 VLLLACHGSMSSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYD 644
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
+ N WI G CY LY + + F DY E+ + P+
Sbjct: 645 ALNNTPCLLPSWISKAAARQRKGRAGRVQSGECYHLYPRCVY-DAFADYQLPELLRTPLQ 703
Query: 544 GVVLLLKSMHIKKVGYIFSFYL 565
+ L +KS+ + + S L
Sbjct: 704 SLCLQIKSLQLGSISEFLSSAL 725
>Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 122/225 (54%), Gaps = 29/225 (12%)
Query: 6 IMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATA 65
++ ++++ +++ GETGCGKTTQ+PQ++ E+ +++ + N I TQPRR++ ++ +
Sbjct: 282 FLKVVSENQVIVVSGETGCGKTTQLPQYILESEIEAARGSLCNII--CTQPRRISAISVS 339
Query: 66 KRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDEA 125
+RVA E G +LG+ VG++VR + G + F T G+LLR L D L + +I+DE
Sbjct: 340 ERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEI 399
Query: 126 HERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQD 185
HER +N D L+ +L ++ R P+ L+L+LMSATL +
Sbjct: 400 HERGMNEDFLLIVLKDLLPRR------------------PD-----LRLILMSATLNAEL 436
Query: 186 FTSGRLFHTPPPVIEVPTRQFPVTVYFARKT-EKTDYIGAAYKKV 229
F+S + P I +P FPV F E+T Y Y ++
Sbjct: 437 FSS---YFDGAPTIHIPGFTFPVRAQFLEDILERTGYRLTPYNQI 478
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
+ +L + + ++ Q +FE R +V+ATN+AETS+TI + +VVD G+ K YD
Sbjct: 585 VLLLACHGSMSSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYD 644
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
+ N WI G CY LY + + F DY E+ + P+
Sbjct: 645 ALNNTPCLLPSWISKAAARQRKGRAGRVQSGECYHLYPRCVY-DAFADYQLPELLRTPLQ 703
Query: 544 GVVLLLKSMHIKKVGYIFSFYL 565
+ L +KS+ + + S L
Sbjct: 704 SLCLQIKSLQLGSISEFLSSAL 725
>Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 122/225 (54%), Gaps = 29/225 (12%)
Query: 6 IMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATA 65
++ ++++ +++ GETGCGKTTQ+PQ++ E+ +++ + N I TQPRR++ ++ +
Sbjct: 282 FLKVVSENQVIVVSGETGCGKTTQLPQYILESEIEAARGSLCNII--CTQPRRISAISVS 339
Query: 66 KRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDEA 125
+RVA E G +LG+ VG++VR + G + F T G+LLR L D L + +I+DE
Sbjct: 340 ERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGVTHVIVDEI 399
Query: 126 HERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQD 185
HER +N D L+ +L ++ R P+ L+L+LMSATL +
Sbjct: 400 HERGMNEDFLLIVLKDLLPRR------------------PD-----LRLILMSATLNAEL 436
Query: 186 FTSGRLFHTPPPVIEVPTRQFPVTVYFARKT-EKTDYIGAAYKKV 229
F+S + P I +P FPV F E+T Y Y ++
Sbjct: 437 FSS---YFDGAPTIHIPGFTFPVRAQFLEDILERTGYRLTPYNQI 478
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
+ +L + + ++ Q +FE R +V+ATN+AETS+TI + +VVD G+ K YD
Sbjct: 585 VLLLACHGSMSSSEQKLIFENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYD 644
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
+ N WI G CY LY + + F DY E+ + P+
Sbjct: 645 ALNNTPCLLPSWISKAAARQRKGRAGRVQSGECYHLYPRCVY-DAFADYQLPELLRTPLQ 703
Query: 544 GVVLLLKSMHIKKVGYIFSFYL 565
+ L +KS+ + + S L
Sbjct: 704 SLCLQIKSLQLGSISEFLSSAL 725
>Medtr1g056490.1 | ATP-dependent RNA helicase | HC |
chr1:24729204-24739293 | 20130731
Length = 999
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 115/221 (52%), Gaps = 29/221 (13%)
Query: 2 MEQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAV 61
M+ E ++A+ + +++ GETGCGKTTQ+PQF+ E + N I TQPRRV+
Sbjct: 236 MKSEFLKAVQGNQVLVVSGETGCGKTTQLPQFILEEEISCLRGADCNII--CTQPRRVSA 293
Query: 62 LATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVII 121
++ A R++ E G LGK VG+ +R + K + F T G+LLR+L D L+ S ++
Sbjct: 294 ISVAARISAERGETLGKTVGYHIRLEAKRSAETRLLFCTTGVLLRQLVQDPELTGVSHLL 353
Query: 122 LDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATL 181
+DE HER +N D LI +L ++ R P+ L+L+LMSAT+
Sbjct: 354 VDEIHERGMNEDFLIIILRDLLPRR------------------PD-----LRLILMSATI 390
Query: 182 RVQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKT-EKTDY 221
F+ + P + +P FPV +F EKT Y
Sbjct: 391 NADLFSK---YFANAPTMHIPGFTFPVVEHFLEDVLEKTRY 428
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
+LP++ +P Q +F+ +R +V+ATN+AE+S+TI + YV+D G+ K YD
Sbjct: 537 FLILPIHGSMPTIDQCEIFDRPPPNKRKIVLATNIAESSITIDDVVYVIDCGKAKETSYD 596
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
+ N + + WI PG CYRLY ++ P+Y E+ + P+
Sbjct: 597 ALNKLASLLPSWISKASARQRRGRAGRVQPGVCYRLYPK-LIHDAMPEYQLPEILRTPLQ 655
Query: 544 GVVLLLKSMHI 554
+ L +KS+ +
Sbjct: 656 ELCLHIKSLQL 666
>Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:16995201-16976389 | 20130731
Length = 1148
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 121/225 (53%), Gaps = 29/225 (12%)
Query: 6 IMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATA 65
+++AI + ++I GETGCGKTTQ+PQ++ E+ S + + I TQPRR++ +A +
Sbjct: 258 LLQAIARNQVIVISGETGCGKTTQLPQYILESEIESGRGAFCSII--CTQPRRISAMAVS 315
Query: 66 KRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDEA 125
+RV+ E G LG+ VGF+VR + G++ + F T GILLR L +D LS + + +DE
Sbjct: 316 ERVSAERGESLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLSGITHVFVDEI 375
Query: 126 HERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQD 185
HER +N D L+ +L ++ R+ L+LVLMSATL +
Sbjct: 376 HERGMNEDFLLIVLKDLLPRRRD-----------------------LRLVLMSATLNAEL 412
Query: 186 FTSGRLFHTPPPVIEVPTRQFPVTVYFARKT-EKTDYIGAAYKKV 229
F++ + P +P +PV +F E T Y ++ +V
Sbjct: 413 FSN---YFGGAPTFHIPGFTYPVRAHFLEDVLEMTGYKVTSFNQV 454
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 421 PGPLFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVK 480
P + + + + + Q +F+ R +V+ATN+AE S+TI + +V+D G+ K
Sbjct: 557 PNRVLLQTCHGSMATSEQKLIFDKPPPNVRKIVLATNMAEASITINDVVFVIDCGKAKET 616
Query: 481 KYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKV 540
YD+ N WI PG CY LY + F +Y E+ +
Sbjct: 617 TYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECYHLYPKCVY-EAFSEYQLPELLRT 675
Query: 541 PVHGVVLLLKSMHIKKVGYIFS 562
P++ + L +KS+ ++ +G S
Sbjct: 676 PLNSLCLQIKSLQVESIGEFLS 697
>Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1190
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 114/221 (51%), Gaps = 47/221 (21%)
Query: 6 IMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATA 65
I A+ H V+I GETGCGKTTQVPQ++ + +G ++ I TQPRR++ ++ +
Sbjct: 196 ITSAVESHQVVLISGETGCGKTTQVPQYILDYMWGKGETCK----ILCTQPRRISAMSVS 251
Query: 66 KRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLREL-------------QNDI 112
+R++ E G G+ VG+++R D K G+ SI T G+LLR L +++I
Sbjct: 252 ERISRERGEAAGENVGYKIRLDSKGGQQSSIVLCTTGVLLRVLVSKGSRRSMKNPAKDEI 311
Query: 113 LLSRYSVIILDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFP- 171
S + II+DE HER +D ++ ++ ++ ++P
Sbjct: 312 --SDITHIIMDEIHERDRYSDFMLAIMRDMLP------------------------LYPH 345
Query: 172 LKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQFPVTVYF 212
L+LVLMSAT+ F+ + PVI+VP +PV Y+
Sbjct: 346 LRLVLMSATIDTARFSQ---YFGGCPVIQVPGFTYPVKTYY 383
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 410 EKMAKENCSPSPGPLFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIK 469
EK+ + +P V+ L++M+P Q +VF+ R +V++TN+AET++TI I
Sbjct: 571 EKLLASSFFNNPSKFVVISLHSMVPTLEQKKVFKRPPPGCRKIVLSTNLAETAVTIDDIV 630
Query: 470 YVVDTGREKVKKYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEF 529
YV+DTGR K K YD N + T + WI PG CY LYS +
Sbjct: 631 YVIDTGRMKEKSYDPYNNVSTLQSSWISKASAKQREGRAGRCQPGICYHLYSKLRAAS-L 689
Query: 530 PDYSPAEVEKVPVHGVVLLLKSM 552
PD+ E++++P+ + L +K +
Sbjct: 690 PDFQTPELKRMPIEELCLQVKML 712
>Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1077
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 114/221 (51%), Gaps = 47/221 (21%)
Query: 6 IMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATA 65
I A+ H V+I GETGCGKTTQVPQ++ + +G ++ I TQPRR++ ++ +
Sbjct: 83 ITSAVESHQVVLISGETGCGKTTQVPQYILDYMWGKGETCK----ILCTQPRRISAMSVS 138
Query: 66 KRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLREL-------------QNDI 112
+R++ E G G+ VG+++R D K G+ SI T G+LLR L +++I
Sbjct: 139 ERISRERGEAAGENVGYKIRLDSKGGQQSSIVLCTTGVLLRVLVSKGSRRSMKNPAKDEI 198
Query: 113 LLSRYSVIILDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFP- 171
S + II+DE HER +D ++ ++ ++ ++P
Sbjct: 199 --SDITHIIMDEIHERDRYSDFMLAIMRDMLP------------------------LYPH 232
Query: 172 LKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQFPVTVYF 212
L+LVLMSAT+ F+ + PVI+VP +PV Y+
Sbjct: 233 LRLVLMSATIDTARFSQ---YFGGCPVIQVPGFTYPVKTYY 270
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 410 EKMAKENCSPSPGPLFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIK 469
EK+ + +P V+ L++M+P Q +VF+ R +V++TN+AET++TI I
Sbjct: 458 EKLLASSFFNNPSKFVVISLHSMVPTLEQKKVFKRPPPGCRKIVLSTNLAETAVTIDDIV 517
Query: 470 YVVDTGREKVKKYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEF 529
YV+DTGR K K YD N + T + WI PG CY LYS +
Sbjct: 518 YVIDTGRMKEKSYDPYNNVSTLQSSWISKASAKQREGRAGRCQPGICYHLYSKLRAAS-L 576
Query: 530 PDYSPAEVEKVPVHGVVLLLKSM 552
PD+ E++++P+ + L +K +
Sbjct: 577 PDFQTPELKRMPIEELCLQVKML 599
>Medtr4g134790.2 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1449
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 116/222 (52%), Gaps = 41/222 (18%)
Query: 2 MEQEIMEAITDHSHVIICGETGCGKTTQVPQF----LYEAGYGSSKSHVHNGIIGVTQPR 57
++ +I++ + ++ +++CGETG GKTTQVPQF + E+G+G H II TQPR
Sbjct: 610 LKGDILQMLKENDVLVVCGETGSGKTTQVPQFILDEMIESGHGG-----HCNII-CTQPR 663
Query: 58 RVAVLATAKRVAYELGLRL-------GKEVGFQVRYDKKIGESCSIKFMTDGILLRELQN 110
R+A ++ A+RVA E R G +G+QVR D E + F T GILLR+L
Sbjct: 664 RIAAISVAERVADE---RCEPSPGSDGSLIGYQVRLDSARNEKTRLLFCTTGILLRKLMG 720
Query: 111 DILLSRYSVIILDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVF 170
+ L+ + II+DE HERSL D ++ +L +I+ + + KVI
Sbjct: 721 NRSLTGITHIIVDEVHERSLLGDFILIVLKNLIEKQSSESSSKVKVI------------- 767
Query: 171 PLKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQFPVTVYF 212
LMSAT+ F+S + PV+ R PVT YF
Sbjct: 768 -----LMSATVDSGSFSS---YFGHCPVVTAEGRTHPVTTYF 801
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 421 PGPLFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVK 480
P +V+PL++ + + Q +VF R VV+ATN+AETS+TI + YV+D G+ K
Sbjct: 934 PSSDWVIPLHSSVASTEQKKVFLRPPGNIRKVVIATNIAETSITIDDVIYVIDCGKHKEN 993
Query: 481 KYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKV 540
+Y+ + + WI PG C+RLY+ F Y E+ ++
Sbjct: 994 RYNPQKKLSSMVEDWISQANARQRQGRAGRVKPGICFRLYTRYRFEKLMRPYQVPEMLRM 1053
Query: 541 PVHGVVLLLKSMHIKKVGYIFSF 563
P+ + L +K + + GYI F
Sbjct: 1054 PLVELCLQIKLLSL---GYIKPF 1073
>Medtr4g134790.1 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1452
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 116/222 (52%), Gaps = 41/222 (18%)
Query: 2 MEQEIMEAITDHSHVIICGETGCGKTTQVPQF----LYEAGYGSSKSHVHNGIIGVTQPR 57
++ +I++ + ++ +++CGETG GKTTQVPQF + E+G+G H II TQPR
Sbjct: 610 LKGDILQMLKENDVLVVCGETGSGKTTQVPQFILDEMIESGHGG-----HCNII-CTQPR 663
Query: 58 RVAVLATAKRVAYELGLRL-------GKEVGFQVRYDKKIGESCSIKFMTDGILLRELQN 110
R+A ++ A+RVA E R G +G+QVR D E + F T GILLR+L
Sbjct: 664 RIAAISVAERVADE---RCEPSPGSDGSLIGYQVRLDSARNEKTRLLFCTTGILLRKLMG 720
Query: 111 DILLSRYSVIILDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVF 170
+ L+ + II+DE HERSL D ++ +L +I+ + + KVI
Sbjct: 721 NRSLTGITHIIVDEVHERSLLGDFILIVLKNLIEKQSSESSSKVKVI------------- 767
Query: 171 PLKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQFPVTVYF 212
LMSAT+ F+S + PV+ R PVT YF
Sbjct: 768 -----LMSATVDSGSFSS---YFGHCPVVTAEGRTHPVTTYF 801
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 421 PGPLFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVK 480
P +V+PL++ + + Q +VF R VV+ATN+AETS+TI + YV+D G+ K
Sbjct: 937 PSSDWVIPLHSSVASTEQKKVFLRPPGNIRKVVIATNIAETSITIDDVIYVIDCGKHKEN 996
Query: 481 KYDSSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKV 540
+Y+ + + WI PG C+RLY+ F Y E+ ++
Sbjct: 997 RYNPQKKLSSMVEDWISQANARQRQGRAGRVKPGICFRLYTRYRFEKLMRPYQVPEMLRM 1056
Query: 541 PVHGVVLLLKSMHIKKVGYIFSF 563
P+ + L +K + + GYI F
Sbjct: 1057 PLVELCLQIKLLSL---GYIKPF 1076
>Medtr1g088590.1 | zinc finger CCCH domain protein | HC |
chr1:39615599-39607040 | 20130731
Length = 1022
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 81/136 (59%), Gaps = 10/136 (7%)
Query: 2 MEQEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAV 61
M ++I++ I + +I GETGCGK++Q+PQFL E I T PRR AV
Sbjct: 35 MRKKIIDKIQQNRVTLIIGETGCGKSSQIPQFLLEENMTP---------ILCTLPRRFAV 85
Query: 62 LATAKRVAYELGLRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLS-RYSVI 120
++ AK VA +LG+EVG+ + + + S I F T G+LL E+Q L + +Y VI
Sbjct: 86 VSVAKMVAKARNCQLGEEVGYHIGHSRHFSASSEIVFKTAGVLLDEMQEKGLTALKYKVI 145
Query: 121 ILDEAHERSLNTDILI 136
ILDE HERS+ +D+++
Sbjct: 146 ILDEVHERSVESDLVL 161
>Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC |
chr3:3875260-3882505 | 20130731
Length = 1731
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 53/274 (19%)
Query: 4 QEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLA 63
+EI++ I ++ GETG GK+TQ+ QFL ++G G+++S I TQPRR+A +
Sbjct: 273 KEILQQIYHQQITVLIGETGSGKSTQLVQFLADSGVGANES------IVCTQPRRIAAKS 326
Query: 64 TAKRVAYELG-------LRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSR 116
A+RV E G ++ ++D +I FMTD LL+ +D +
Sbjct: 327 LAERVREESGGCYEDSSIKCYSSFSSWNKFDSRI------IFMTDHCLLQHYMSDKNFTG 380
Query: 117 YSVIILDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVL 176
S II+DEAHERS+NTD+L+ ++ ++ R + ++L++
Sbjct: 381 ISCIIVDEAHERSINTDLLLALIKNLLSKRVE-----------------------MRLII 417
Query: 177 MSATLRVQDFTSGRLFHTPPPVIEVPTRQFPVTVYF--------ARKTEKTDYIGAAYKK 228
MSAT + + + + VP R FPV V + + + Y+ K
Sbjct: 418 MSATADAKQLSD---YFYGCGIFRVPGRNFPVEVRYVPSEYEGRSHSSVVDPYVSDVVKM 474
Query: 229 VLTIHKRLPPGGILVFVTGQREVEDLCRKLRKAS 262
IH+ G IL F+T Q +VE C K S
Sbjct: 475 ATEIHRTEKEGTILAFLTSQLDVEWACEKFEAPS 508
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 426 VLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYDSS 485
LPL+ L + Q +F+ + R V+ +TNVAETSLTIPG+KYV+D+G K ++D S
Sbjct: 511 ALPLHGKLSSEEQFHIFKNYPGK-RKVIFSTNVAETSLTIPGVKYVIDSGLVKDSRFDPS 569
Query: 486 NGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVHGV 545
+GM +V WI PG CYRLYS A + + + P E+ +V +
Sbjct: 570 SGMNVLKVCWISQSSAKQRAGRAGRTEPGRCYRLYSEADYQSMETNQDP-EIRRVHLGVA 628
Query: 546 VLLLKSMHIKKV 557
VL + ++ +K V
Sbjct: 629 VLKILALGVKNV 640
>Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC |
chr3:39323283-39316838 | 20130731
Length = 1718
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 131/275 (47%), Gaps = 54/275 (19%)
Query: 4 QEIMEAITDHSHVIICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLA 63
+EI++ I ++ GETG GK+TQ+ QFL ++G G+ ++ I TQPR++A +
Sbjct: 273 REILQQIHHQQITVLIGETGSGKSTQIVQFLADSGIGADET------IVCTQPRKIAAKS 326
Query: 64 TAKRVAYE-LGLRLGKEVGFQVRYD--KKIGESCSIKFMTDGILLRELQNDILLSRYSVI 120
A+RV E G + + +K +S I FMTD LL++ +D LS S I
Sbjct: 327 LAERVQEESKGCYEENSIQCYSTFSSCQKFDDS-RIAFMTDHCLLQQYMSDRNLSGVSCI 385
Query: 121 ILDEAHERSLNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSAT 180
I+DEAHERSLNTD+L+ ++ ++ R + ++L++MSAT
Sbjct: 386 IVDEAHERSLNTDLLLALIKNLLCKRVE-----------------------MRLIIMSAT 422
Query: 181 LRVQD----FTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAA---------YK 227
+ F +FH V R FPV V + +E ++ G+A K
Sbjct: 423 ADAKQLSDYFYGCGIFH-------VLGRNFPVEVRYV-PSEYGEHSGSAVLAPYVFDVVK 474
Query: 228 KVLTIHKRLPPGGILVFVTGQREVEDLCRKLRKAS 262
IHK G IL F+T Q EVE C + S
Sbjct: 475 LATEIHKTEKEGAILAFLTSQVEVEWACENFKALS 509
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 426 VLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYDSS 485
LPL+ L + Q VF+ + R V+ +TN+AETS+TIPG+KYV+D+G K ++D
Sbjct: 512 ALPLHGKLSSEEQFHVFQKYPGK-RKVIFSTNLAETSITIPGVKYVIDSGLVKDCRFDPC 570
Query: 486 NGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVHGV 545
GM +V WI PG CYR+YS A + + + P E+ +V +
Sbjct: 571 TGMNVLKVCWISQSSANQRAGRAGRTEPGRCYRMYSEADYRSMELNQEP-EIRRVHLGVA 629
Query: 546 VLLLKSMHIKKV 557
VL + ++ +K V
Sbjct: 630 VLKILALGVKNV 641
>Medtr0267s0070.1 | NB-ARC domain disease resistance protein, putative
| LC | scaffold0267:17737-24509 | 20130731
Length = 1982
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 55/263 (20%)
Query: 17 IICGETGCGKTTQVPQFLYEAGYGSSKSHVHNGIIGVTQPRRVAVLATAKRVAYELG--- 73
++ GETG GK+TQ+ QFL ++G G+++S I TQPRR+A + A+RV E G
Sbjct: 939 VLIGETGSGKSTQLVQFLADSGVGANES------IVCTQPRRIAAKSLAERVREESGGCY 992
Query: 74 ----LRLGKEVGFQVRYDKKIGESCSIKFMTDGILLRELQNDILLSRYSVIILDEAHERS 129
++ ++D +I FMTD LL+ +D LS S II+DEAHERS
Sbjct: 993 EDSSIKCYSSFSSWNKFDSRI------IFMTDHCLLQHYMSDKNLSGISCIIVDEAHERS 1046
Query: 130 LNTDILIGMLSRIIKTRQKFYDEQQKVILSGGTISPEKMVFPLKLVLMSATLRVQDFTSG 189
+NTD+L+ ++ ++ R + ++L++MSAT + +
Sbjct: 1047 INTDLLLALIKNLLSKRVE-----------------------MRLIIMSATADAKQLSD- 1082
Query: 190 RLFHTPPPVIEVPTRQFPVTVYF--------ARKTEKTDYIGAAYKKVLTIHK--RLPPG 239
+ + VP R FPV V + + + Y+ K IH+ + G
Sbjct: 1083 --YFYGCGIFRVPGRNFPVEVRYVPSEYEGRSHSSVVDPYVSDVVKMATEIHRTEKEKEG 1140
Query: 240 GILVFVTGQREVEDLCRKLRKAS 262
IL F+T Q +VE C K S
Sbjct: 1141 TILAFLTSQLDVEWACEKFEAPS 1163
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 427 LPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYDSSN 486
LPL+ L + Q +F+ + R V+ +TNVAETSLTIPG+KYV+D+G K ++D S+
Sbjct: 1167 LPLHGKLSSEEQFHIFKNYPGK-RKVIFSTNVAETSLTIPGVKYVIDSGLVKDSRFDPSS 1225
Query: 487 GMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVHGVV 546
GM +V WI PG CYRLYS A + + + P E+ +V + V
Sbjct: 1226 GMNVLKVCWISQSSAKQRAGHAGRTEPGRCYRLYSEADYQSMETNQDP-EIRRVHLGVAV 1284
Query: 547 LLLKSMHIKKV 557
L + ++ +K V
Sbjct: 1285 LKILALGVKNV 1295
>Medtr1543s0010.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 | HC | scaffold1543:1149-130 | 20130731
Length = 304
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
L +LP+Y+ LPA Q ++F+ ++ R +VATN+AETSLT+ GI YV+DTG K+K Y+
Sbjct: 15 LLILPVYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYN 74
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNE 528
GM+ +V PG CYRLY+ +A+ NE
Sbjct: 75 PRMGMDALQVFPFSQAAANQRAGRAGRTGPGTCYRLYTESAYLNE 119
>Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein | HC
| chr4:39455746-39462206 | 20130731
Length = 519
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 410 EKMAKENCSPSPGP---LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIP 466
E++ KE S P L V+P+YA LP+ Q+R F V++ATN+AETS+TIP
Sbjct: 104 ERLIKERLSKLPQEYQRLQVVPIYAALPSEQQMRAFAPAPSGFHKVILATNIAETSITIP 163
Query: 467 GIKYVVDTGREKVKKYDSSNGMETYEVQWIXXXXXXX------XXXXXXXXXPGHCYRLY 520
GIKYV+D G K + YD GME+ V PG C+RLY
Sbjct: 164 GIKYVIDPGLVKARSYDPGKGMESLIVFDFARRVVQIDYLHFGNSGRAGREGPGKCFRLY 223
Query: 521 SSAAFNNEFPDYSPAEVEKVPVHGVVLLLKSMHIKKV-GYIF 561
F + D + E+++ + V+L LK++ + + G+ F
Sbjct: 224 PENEF-EKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDF 264
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 8/99 (8%)
Query: 171 PLKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQFPVTVYFARKTEKTDYIGAAYKKVL 230
PLKL++MSA+L + F+ + + + RQFPV +++ R KTDY+ AA +
Sbjct: 24 PLKLIIMSASLDARTFSE---YFGGAKAVHIQGRQFPVDIFYTRHP-KTDYVDAALITIF 79
Query: 231 TIHKRLPPGGILVFVTGQREVEDLCR----KLRKASKEF 265
+H+ PG ILVF+TGQ E++ + R +L K +E+
Sbjct: 80 QVHQDEAPGDILVFLTGQEEIDAVERLIKERLSKLPQEY 118
>Medtr8g045110.1 | ATP-dependent RNA helicase A-like protein | HC |
chr8:17594404-17602720 | 20130731
Length = 630
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Query: 424 LFVLPLYAMLPAAAQLRVFEGVKEEERLVVVATNVAETSLTIPGIKYVVDTGREKVKKYD 483
+ + + ++ Q +F+ R +V+ATNVAE S+TI I +++D G+ YD
Sbjct: 147 VLIQTCHGLMETFEQKLIFDKPPPNVRKIVLATNVAEASITINDIVFIIDCGKTNESSYD 206
Query: 484 SSNGMETYEVQWIXXXXXXXXXXXXXXXXPGHCYRLYSSAAFNNEFPDYSPAEVEKVPVH 543
+ N WI PG CY LY + F +Y E+ + P++
Sbjct: 207 ALNNTPCLLPSWISQASARQRRGRAGHVQPGECYHLYPKCVY-EAFSEYQLPEILRTPLN 265
Query: 544 GVVLLLKSMHIKKVGYIFSFYL 565
+ L +KS+ ++ +G S L
Sbjct: 266 SLCLQIKSLQVESIGKFLSSAL 287