Miyakogusa Predicted Gene

Lj0g3v0210329.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0210329.1 tr|F2CSI2|F2CSI2_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,40.24,1e-17,seg,NULL; no
description,NULL; SUBFAMILY NOT NAMED,NULL; FAS-ASSOCIATED
PROTEIN,NULL,CUFF.13501.1
         (192 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g077740.1 | FAS-associated factor 2-B-like protein | HC | ...    84   8e-17

>Medtr1g077740.1 | FAS-associated factor 2-B-like protein | HC |
          chr1:34722081-34728616 | 20130731
          Length = 467

 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 49/95 (51%), Positives = 52/95 (54%), Gaps = 13/95 (13%)

Query: 1  MADVADKLAYFQAITGLEDPDLCTEILAAHGWDLELAISSFXXXXXXXXXXXXXXXXXXX 60
          M+D+ADKLAYFQAITGL+DPDLC EILAAH WDLELAISSF                   
Sbjct: 1  MSDIADKLAYFQAITGLQDPDLCNEILAAHNWDLELAISSFTTTDTPHGGDNDNADQNT- 59

Query: 61 XXXEHLL--------XXXXXXXXXXGLAWKLIKLP 87
              HLL                  GLAWKLIKLP
Sbjct: 60 ----HLLSQSQSSSQSEPPLPPPPPGLAWKLIKLP 90