Miyakogusa Predicted Gene

Lj0g3v0210279.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0210279.1 Non Characterized Hit- tr|I1M4B4|I1M4B4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,78.29,0,Lycopene_cycl,Lycopene cyclase-type, FAD-binding;
FAD/NAD(P)-binding domain,NULL; seg,NULL; no descr,CUFF.13499.1
         (502 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g086700.1 | capsanthin/capsorubin synthase, chromoplast pr...   760   0.0  
Medtr2g086730.1 | capsanthin/capsorubin synthase, chromoplast pr...   688   0.0  
Medtr7g090150.1 | chromoplast lycopene beta-cyclase | HC | chr7:...   516   e-146
Medtr2g040060.1 | lycopene epsilon cyclase | HC | chr2:17570312-...   247   2e-65

>Medtr2g086700.1 | capsanthin/capsorubin synthase, chromoplast
           protein | HC | chr2:36455122-36457181 | 20130731
          Length = 502

 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/506 (73%), Positives = 410/506 (81%), Gaps = 8/506 (1%)

Query: 1   MDTRFLLFSPPPPTNLHHRHRLLRSPKPSTTIHHNXXXXXXXXXXXXXXXIHSKFGNFLD 60
           M T  +L SPPPPT     H+L  S  P    H                    KFGNFLD
Sbjct: 1   MGTSLMLISPPPPTK---THQLTPSTFPFLKTHQTISLPSSRKTNTMINST-KKFGNFLD 56

Query: 61  MMPEYQPEALDFDLPWCHPSDRARFDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPDPLSI 120
           +  EYQPEALDFDLPW HPSDR++FDVII+GAGPAGIRLAEQVS YGIKVCCVDP+PLS+
Sbjct: 57  LKSEYQPEALDFDLPWHHPSDRSQFDVIIVGAGPAGIRLAEQVSLYGIKVCCVDPNPLSM 116

Query: 121 WPNNYGVWCDEFESLGLEDCLDKTWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLVEGC 180
           WPNNYGVW DEFE LGLEDCLDKTW MAS++ID+ KTKYLDRCYGRVSRKKLKE+LV+GC
Sbjct: 117 WPNNYGVWLDEFEGLGLEDCLDKTWPMASIYIDDNKTKYLDRCYGRVSRKKLKEKLVKGC 176

Query: 181 VFNGVRFHKAQAWKIVHQEFESMLLCDDGTELKGSLIVDASGFGSDFVKYD----KVRNC 236
           VFNGVRF+KA+ W+I H EFES+++CDDGT+LKGSL+VDASGFGS+F  YD    + +N 
Sbjct: 177 VFNGVRFYKAKVWEIKHHEFESIVVCDDGTKLKGSLVVDASGFGSNFTDYDNHKLRKKNY 236

Query: 237 GCQIAHGVLAEVEDHPFDLDKMVLMDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVF 296
           GCQIAHGVL EV+ HPFDLDKMVLMDWRDSHLGNEP LR  N K PTFLYAMPFSSNL+F
Sbjct: 237 GCQIAHGVLVEVDGHPFDLDKMVLMDWRDSHLGNEPYLRDGNSKFPTFLYAMPFSSNLIF 296

Query: 297 LEETSLVSRPVLSYMEVKRRMVARLRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIG 356
           LEETSLVSRPVLSYM+VKRRMVARLRHLG+ VKRVLEDEKCLIPMGGPLP I QNVM  G
Sbjct: 297 LEETSLVSRPVLSYMDVKRRMVARLRHLGINVKRVLEDEKCLIPMGGPLPRISQNVMPFG 356

Query: 357 GNSGVVHPSTGYSVARSMXXXXXXXXXXXESLGSTRMIRGKPLYAKVWNSLWPIESRLNR 416
           GNSG+VHPSTGY VAR+M           E LGSTRMIRGK LYA VWNS+WPIE R  R
Sbjct: 357 GNSGIVHPSTGYMVARTMALAPIVAASINECLGSTRMIRGKNLYANVWNSMWPIERRFVR 416

Query: 417 EFYSFGMETLLKLDLNGTRRFFDAFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASNP 476
           E Y FGMETLLKLDLN TR FFDAFFDLKPY WQGFLSS+LSLK+   LSLSLFGHASN 
Sbjct: 417 ECYCFGMETLLKLDLNETRSFFDAFFDLKPYYWQGFLSSKLSLKDFALLSLSLFGHASNS 476

Query: 477 SRFDIVTKCPVPLAKMMGNMTLDSIG 502
           SRFDIVTKCPVPLA+++GN+ L+SIG
Sbjct: 477 SRFDIVTKCPVPLAQLIGNIALESIG 502


>Medtr2g086730.1 | capsanthin/capsorubin synthase, chromoplast
           protein | HC | chr2:36463401-36461725 | 20130731
          Length = 490

 Score =  688 bits (1776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/512 (67%), Positives = 398/512 (77%), Gaps = 34/512 (6%)

Query: 1   MDTRFLLFSPP-------PPTNLHHRHRLLRSPKPSTTIHHNXXXXXXXXXXXXXXXIHS 53
           M+T  +LFSPP       P    HH     R+  PS+   H                IH+
Sbjct: 1   MNTSVMLFSPPITTPSIFPLPKTHHN----RTSLPSSRKQHQGR-------------IHN 43

Query: 54  --KFGNFLDMMPEYQPEALDFDLPWCHPSDRARFDVIIIGAGPAGIRLAEQVSRYGIKVC 111
             KFGNFLD+  EYQPEALDFDLP  HPSD   F+VIIIGAGPAGIRLAEQVS YG+KVC
Sbjct: 44  TRKFGNFLDLKSEYQPEALDFDLPLFHPSDHTCFNVIIIGAGPAGIRLAEQVSLYGMKVC 103

Query: 112 CVDPDPLSIWPNNYGVWCDEFESLGLEDCLDKTWAMASVHIDEGKTKYLDRCYGRVSRKK 171
           CVDP+PLSIWPNNYGVW DEFE LGLEDCLDKTW + S++ID+  TKYLDRCYGRV+++K
Sbjct: 104 CVDPNPLSIWPNNYGVWFDEFEGLGLEDCLDKTWPITSIYIDDRTTKYLDRCYGRVNKRK 163

Query: 172 LKERLVEGCVFNGVRFHKAQAWKIVHQEFESMLLCDDGTELKGSLIVDASGFGSDFVKYD 231
           LKE LV+GCVFNGVRF+KA+A +I H EFES+++CDDG +LKGSL+VDASGFGS F++YD
Sbjct: 164 LKENLVKGCVFNGVRFYKAKAMQIEHHEFESIVVCDDGVDLKGSLVVDASGFGSKFIEYD 223

Query: 232 --KVRNCGCQIAHGVLAEVEDHPFDLDKMVLMDWRDSHLGNEPNLRASNLKVPTFLYAMP 289
             KV+N G QIA+GVLAEV+ HPFDLDK+VLMDWRDSH       R  N K  TF+YAMP
Sbjct: 224 DHKVKNYGFQIAYGVLAEVDAHPFDLDKVVLMDWRDSHC------RDGNAKSSTFMYAMP 277

Query: 290 FSSNLVFLEETSLVSRPVLSYMEVKRRMVARLRHLGMRVKRVLEDEKCLIPMGGPLPMIP 349
           FSSNL+FLEETSLVSRP LS+ EVK RMVARL+HLG+ VKRVLEDEK LIPMGGPLP IP
Sbjct: 278 FSSNLIFLEETSLVSRPALSHTEVKTRMVARLKHLGINVKRVLEDEKGLIPMGGPLPRIP 337

Query: 350 QNVMAIGGNSGVVHPSTGYSVARSMXXXXXXXXXXXESLGSTRMIRGKPLYAKVWNSLWP 409
           QNV+A G NSGVVHPSTGY +AR+M           + LGSTRMIRGK +YA VWNS+WP
Sbjct: 338 QNVIAFGANSGVVHPSTGYMMARTMTLAPIVAASINQCLGSTRMIRGKQVYANVWNSMWP 397

Query: 410 IESRLNREFYSFGMETLLKLDLNGTRRFFDAFFDLKPYQWQGFLSSRLSLKELIWLSLSL 469
           IESR++REFY+FGMETLLKLDLN TR+FFDAFF+LKPY  QGFLSS L+L +++WLS+SL
Sbjct: 398 IESRISREFYTFGMETLLKLDLNETRQFFDAFFELKPYYMQGFLSSSLTLNDIVWLSMSL 457

Query: 470 FGHASNPSRFDIVTKCPVPLAKMMGNMTLDSI 501
           F HASNPSRF I  KCP  LAKMMGN+ L+ I
Sbjct: 458 FAHASNPSRFAIARKCPELLAKMMGNICLEFI 489


>Medtr7g090150.1 | chromoplast lycopene beta-cyclase | HC |
           chr7:35385688-35387184 | 20130731
          Length = 498

 Score =  516 bits (1330), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 242/442 (54%), Positives = 328/442 (74%)

Query: 58  FLDMMPEYQPEALDFDLPWCHPSDRARFDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPDP 117
            L+++PE++ E LDF+LP    +     D++++G GPAG+ +A+QVS  G+ VC +DP+P
Sbjct: 55  LLELVPEFKKENLDFELPLYDSTKGTVVDLVVVGGGPAGLAVAQQVSEAGLSVCAIDPNP 114

Query: 118 LSIWPNNYGVWCDEFESLGLEDCLDKTWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLV 177
             IWPNNYGVW DEFE++ L DCLDKTW+ A V+ID+   K LDR YGRV+RK LK +++
Sbjct: 115 RLIWPNNYGVWVDEFEAMDLLDCLDKTWSGAVVYIDDKTKKDLDRPYGRVNRKLLKSKML 174

Query: 178 EGCVFNGVRFHKAQAWKIVHQEFESMLLCDDGTELKGSLIVDASGFGSDFVKYDKVRNCG 237
           + C+ NGV+FH+A+  K++H+E +SML+C+DG  ++ ++++DA+GF    V+YDK  N G
Sbjct: 175 QKCIANGVKFHQAKVIKVIHEESKSMLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPG 234

Query: 238 CQIAHGVLAEVEDHPFDLDKMVLMDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFL 297
            Q+A+G+LAEVE+HPFD+DKM+ MDWRDSHL N+  L+  N K+PTFLYAMPFSS  +FL
Sbjct: 235 YQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDNDLKLKERNSKIPTFLYAMPFSSTKIFL 294

Query: 298 EETSLVSRPVLSYMEVKRRMVARLRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIGG 357
           EETSLV+RP L   +++ RMVARL+HLG+ VK + EDE+C+IPMGGPLP++PQ V+ IGG
Sbjct: 295 EETSLVARPGLRMDDIQDRMVARLKHLGINVKSIEEDEQCVIPMGGPLPVLPQRVVGIGG 354

Query: 358 NSGVVHPSTGYSVARSMXXXXXXXXXXXESLGSTRMIRGKPLYAKVWNSLWPIESRLNRE 417
            +G+VHPSTGY VAR++           + LGS R + G  + A+VW  LWPIE R  RE
Sbjct: 355 TAGMVHPSTGYMVARTLAAAPIVANAIVQYLGSDRGLLGDEVSARVWKDLWPIERRRQRE 414

Query: 418 FYSFGMETLLKLDLNGTRRFFDAFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASNPS 477
           F+ FGM+ LLKLDL GTRRFFDAFF+L+P+ W GFLSSRL L EL    LSLF +ASN S
Sbjct: 415 FFCFGMDVLLKLDLPGTRRFFDAFFNLEPHYWHGFLSSRLYLPELFTFGLSLFSYASNTS 474

Query: 478 RFDIVTKCPVPLAKMMGNMTLD 499
           R +I+ K  +PL  M+ N+  D
Sbjct: 475 RLEIMAKGTLPLVNMVNNLIQD 496


>Medtr2g040060.1 | lycopene epsilon cyclase | HC |
           chr2:17570312-17577439 | 20130731
          Length = 531

 Score =  247 bits (631), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 161/409 (39%), Positives = 234/409 (57%), Gaps = 17/409 (4%)

Query: 85  FDVIIIGAGPAGIRLAEQVSRYGIKVCCVDPD-PLSIWPNNYGVWCDEFESLGLEDCLDK 143
            D+++IG GPAG+ LA +  + G+KV  + PD P +   NNYGVW DEF+ LGLE C++ 
Sbjct: 110 LDLVVIGCGPAGLALAAESGKLGLKVGLIGPDLPFT---NNYGVWEDEFKGLGLEGCIEH 166

Query: 144 TWAMASVHIDEGKTKYLDRCYGRVSRKKLKERLVEGCVFNGVRFHKAQAWKIVH-QEFES 202
            W    V+ID      + R YGRVSR  L E L+  CV +GV +  ++  +IV      +
Sbjct: 167 VWKDTVVYIDNKNPISIGRSYGRVSRHLLHEELLRRCVESGVSYLGSKVERIVEASNGHN 226

Query: 203 MLLCDDGTELKGSLIVDASGFGS-DFVKYDKVRNCGC-QIAHGVLAEVEDHPFDLDKMVL 260
            ++C+  T +   L   ASG  S   ++Y+      C Q A+GV  EVE+ P+D + MV 
Sbjct: 227 HVVCEYDTVVPCRLATVASGAASGKLLQYEVGGPKVCVQTAYGVEVEVENSPYDPNVMVF 286

Query: 261 MDWRDSHLGNEPNLRASNLKVPTFLYAMPFSSNLVFLEETSLVSRPVLSYMEVKRRMVAR 320
           MD+RD    N  +L A   K PTFLYAMP S + VF EET L S+  + +  +K+++++R
Sbjct: 287 MDYRDYMKNNVQSLEA---KYPTFLYAMPMSRSKVFFEETCLASKDAMPFDLLKKKLLSR 343

Query: 321 LRHLGMRVKRVLEDEKCLIPMGGPLPMIPQNVMAIGGNSGVVHPSTGYSVARSMXXXXXX 380
           L+ +G++V +  E+E   IP+GG LP   Q  +A G  + +VHP+TGYSV RS+      
Sbjct: 344 LKTMGIKVTKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPQY 403

Query: 381 XXXXXESL--GSTRMI----RGKPLYA-KVWNSLWPIESRLNREFYSFGMETLLKLDLNG 433
                  L  G+ R I    R K   + + WN+LWP E +  R F+ FG+  +++LD+ G
Sbjct: 404 ASVIATILNDGTARDIVTYGRSKENPSMRAWNTLWPQERKRQRSFFLFGLALIVQLDIEG 463

Query: 434 TRRFFDAFFDLKPYQWQGFLSSRLSLKELIWLSLSLFGHASNPSRFDIV 482
           TR FF  FF L  + WQGFL S LS K+L+  +L +F  A N  R  +V
Sbjct: 464 TRTFFRTFFCLPEWMWQGFLGSSLSSKDLLLFALYMFIIAPNNLRMSLV 512