Miyakogusa Predicted Gene

Lj0g3v0209919.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0209919.1 CUFF.13463.1
         (285 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g051155.1 | polyglutamine-binding protein | HC | chr1:1996...   178   5e-45

>Medtr1g051155.1 | polyglutamine-binding protein | HC |
           chr1:19968651-19975737 | 20130731
          Length = 467

 Score =  178 bits (452), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 99/173 (57%), Positives = 118/173 (68%), Gaps = 7/173 (4%)

Query: 101 AQDAVLREQEIATQIIIRSQREVRAVASPTE-----ENSDIFSERRDPNALKEHLMKMAS 155
           AQDA+LREQE+ATQ IIR+QRE+ A+ SP+      +NSDIFS+R  PNALKEHL+ MA+
Sbjct: 30  AQDALLREQELATQNIIRTQREMAAMESPSTSTKDFDNSDIFSQRHHPNALKEHLLNMAT 89

Query: 156 EHRAEMAVKRGKAPRPXXXXXXX-XXXXXXXXXXXXXDAPKLNAT-TGSHTFSQPEPKLD 213
           +HRA++AVKR     P                     D PKLNA   G++   QPE KLD
Sbjct: 90  DHRAQIAVKRPNPTYPQQQGNTEIGNGYGVPGGGAYNDVPKLNADDAGNNASGQPESKLD 149

Query: 214 RSSEQEPGAKELPEYLKQKLRARGILKDDTRSKDLKGTSAELMENEKLPPGWV 266
             SEQ+P +KELPEYLKQKL+ARGILKDD  S+D K TSAE M NEKLPPGWV
Sbjct: 150 GCSEQKPASKELPEYLKQKLKARGILKDDRHSEDPKATSAEFMGNEKLPPGWV 202