Miyakogusa Predicted Gene
- Lj0g3v0209329.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0209329.1 Non Characterized Hit- tr|I1KH27|I1KH27_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2711
PE=,95.31,0,seg,NULL; no description,NULL; DEAD,DNA/RNA helicase,
DEAD/DEAH box type, N-terminal; Helicase_C,Hel,CUFF.13453.1
(426 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 820 0.0
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 775 0.0
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 768 0.0
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 768 0.0
Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like prote... 430 e-120
Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like prote... 430 e-120
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 261 1e-69
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 258 1e-68
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 258 1e-68
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 248 6e-66
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 244 1e-64
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 243 2e-64
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 243 3e-64
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 243 4e-64
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 241 1e-63
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 233 2e-61
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 202 4e-52
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 202 4e-52
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 202 5e-52
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 202 5e-52
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 199 4e-51
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 199 6e-51
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 194 1e-49
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 192 7e-49
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 192 7e-49
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 192 7e-49
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 186 3e-47
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 186 3e-47
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 185 8e-47
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 185 8e-47
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 184 1e-46
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 184 2e-46
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 183 3e-46
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 182 4e-46
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 182 4e-46
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 178 7e-45
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 177 1e-44
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 176 3e-44
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 176 3e-44
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 176 3e-44
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 175 6e-44
Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 172 5e-43
Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like prote... 169 3e-42
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 169 4e-42
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 169 6e-42
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 169 6e-42
Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC | sc... 166 4e-41
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 166 5e-41
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 165 1e-40
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 165 1e-40
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 165 1e-40
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 165 1e-40
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 165 1e-40
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 165 1e-40
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 165 1e-40
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 165 1e-40
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 165 1e-40
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 165 1e-40
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 165 1e-40
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 164 2e-40
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 164 2e-40
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 164 2e-40
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 163 3e-40
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 162 5e-40
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 155 7e-38
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 155 1e-37
Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like prote... 152 4e-37
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 150 2e-36
Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like prote... 150 2e-36
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 149 5e-36
Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 144 1e-34
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 142 5e-34
Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like prote... 139 5e-33
Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family pro... 138 8e-33
Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like prote... 135 7e-32
Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like prote... 135 7e-32
Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like prote... 135 7e-32
Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like prote... 135 7e-32
Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 135 9e-32
Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like prote... 132 8e-31
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 131 1e-30
Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like prote... 130 3e-30
Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 129 7e-30
Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like prote... 125 6e-29
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 125 1e-28
Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC | chr... 123 3e-28
Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC | chr... 123 3e-28
Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC | chr... 123 3e-28
Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC | chr... 123 3e-28
Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC | chr... 123 3e-28
Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like prote... 112 8e-25
Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 108 7e-24
Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 104 2e-22
Medtr4g077370.1 | DEAD-box helicase family protein | LC | chr4:2... 103 2e-22
Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like prote... 103 2e-22
Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 101 2e-21
Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like prote... 100 2e-21
Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 98 1e-20
Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like prote... 96 7e-20
Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like prote... 91 2e-18
Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 89 1e-17
Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC | s... 86 7e-17
Medtr8g032230.1 | DEAD-box helicase family protein | HC | chr8:1... 84 2e-16
Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 69 6e-12
Medtr8g007360.1 | DEAD-box ATP-dependent RNA helicase, putative ... 69 1e-11
Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 68 1e-11
Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC | ... 62 9e-10
Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like prote... 62 1e-09
Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like prote... 62 1e-09
Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 61 2e-09
Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative ... 61 2e-09
Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative ... 61 2e-09
Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative ... 60 3e-09
Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative ... 60 3e-09
Medtr2g088350.1 | helicase family carboxy-terminal domain protei... 57 4e-08
Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 |... 56 5e-08
Medtr8g018330.1 | eukaryotic translation initiation factor 4A1 |... 55 1e-07
Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC | ... 54 3e-07
Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC | ... 53 5e-07
Medtr8g079452.1 | helicase family carboxy-terminal domain protei... 53 6e-07
Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC | ... 53 7e-07
Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC | ... 52 8e-07
Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC | ... 52 8e-07
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 52 9e-07
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 52 1e-06
Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC | chr3:28... 50 5e-06
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/426 (93%), Positives = 404/426 (94%)
Query: 1 MGELKDTXXXXXXXXXXXXXXXKAPDSAKPAAETAKKGYVGIHSSGFRDFLLKPELLRAI 60
MGELKDT KA DS KP E+ KKGYVGIHSSGFRDFLLKPELLRAI
Sbjct: 79 MGELKDTEVYEEELIDYEEEDEKALDSTKPTTESVKKGYVGIHSSGFRDFLLKPELLRAI 138
Query: 61 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLC 120
VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQIDPVPGQVAALVLC
Sbjct: 139 VDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVAALVLC 198
Query: 121 HTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALT 180
HTRELAYQICHE ERFSTYLPDIKVAVFYGGVNIKVHK+LLKNECPHIVVGTPGRILALT
Sbjct: 199 HTRELAYQICHEVERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALT 258
Query: 181 RDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCK 240
RDKDLGLKNVRHFILDECDKMLESLDMR+DVQEIFKLTPHDKQVMMFSATLSKEIRPVCK
Sbjct: 259 RDKDLGLKNVRHFILDECDKMLESLDMRKDVQEIFKLTPHDKQVMMFSATLSKEIRPVCK 318
Query: 241 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRA 300
KFMQDPMEIYVDDEAKLTLHGLVQHYIKLQ+ EKNRKLNDLLDALDFNQVVIFVKSVSRA
Sbjct: 319 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLQEPEKNRKLNDLLDALDFNQVVIFVKSVSRA 378
Query: 301 AELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVI 360
AELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVI
Sbjct: 379 AELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVI 438
Query: 361 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDT 420
NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS+GDSEVLNQVQSRFEVDIKELPEQIDT
Sbjct: 439 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAGDSEVLNQVQSRFEVDIKELPEQIDT 498
Query: 421 ATYMPN 426
+TYMPN
Sbjct: 499 STYMPN 504
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/406 (91%), Positives = 390/406 (96%), Gaps = 2/406 (0%)
Query: 23 KAPDS--AKPAAETAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 80
KAPDS AK E+ KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI
Sbjct: 22 KAPDSVGAKVNGESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Query: 81 LGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYL 140
LGMDV+CQAKSGMGKTAVFVLS+LQQIDPVPGQV+AL+LCHTRELAYQICHEFERFSTYL
Sbjct: 82 LGMDVLCQAKSGMGKTAVFVLSTLQQIDPVPGQVSALILCHTRELAYQICHEFERFSTYL 141
Query: 141 PDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDK 200
D+KVAVFYGGVNIKVHK+LLKNECPHIVVGTPGRILAL RDKDL LKNVRHFILDECDK
Sbjct: 142 ADLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDK 201
Query: 201 MLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 260
MLESLDMR+DVQ+IFK+TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH
Sbjct: 202 MLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
Query: 261 GLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 320
GLVQHYIKL++ EKNRKLNDLLDALDFNQVVIFVKSVSRAAEL+KLLVECNFPSICIHSG
Sbjct: 262 GLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSG 321
Query: 321 MSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 380
MSQEERLKRYKGFKEG RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR
Sbjct: 322 MSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 381 FGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDTATYMPN 426
FGTKGLAITFVS S D +VLN VQSRFEVDIK+LPEQIDT+TYMP+
Sbjct: 382 FGTKGLAITFVSCSSDVDVLNNVQSRFEVDIKQLPEQIDTSTYMPS 427
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/406 (90%), Positives = 389/406 (95%), Gaps = 2/406 (0%)
Query: 23 KAPDS--AKPAAETAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 80
KAPD+ AK E KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI
Sbjct: 22 KAPDTNGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Query: 81 LGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYL 140
LGMDVICQAKSGMGKTAVFVLS+LQQIDPVPGQV+ALVLCHTRELAYQICHEFERFSTYL
Sbjct: 82 LGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYL 141
Query: 141 PDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDK 200
PD+KVAVFYGGVNIKVHK+LLKNECP IVVGTPGRILAL R+K+L LKNVRHF+LDECDK
Sbjct: 142 PDLKVAVFYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDK 201
Query: 201 MLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 260
MLESLDMR+DVQ+IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH
Sbjct: 202 MLESLDMRKDVQDIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
Query: 261 GLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 320
GLVQHYIKL++ EKNRKLNDLLDALDFNQVVIFVKSVSRAAEL++LL+ECNFPSICIHSG
Sbjct: 262 GLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSG 321
Query: 321 MSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 380
MSQEERLKRY+GFKEG RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR
Sbjct: 322 MSQEERLKRYRGFKEGHSRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 381 FGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDTATYMPN 426
FGTKGLAITFVS S D +VLN VQSRFE+DIK+LPEQIDT+TYMP+
Sbjct: 382 FGTKGLAITFVSCSSDVDVLNNVQSRFEIDIKQLPEQIDTSTYMPS 427
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/406 (90%), Positives = 389/406 (95%), Gaps = 2/406 (0%)
Query: 23 KAPDS--AKPAAETAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 80
KAPD+ AK E KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI
Sbjct: 22 KAPDTNGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Query: 81 LGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYL 140
LGMDVICQAKSGMGKTAVFVLS+LQQIDPVPGQV+ALVLCHTRELAYQICHEFERFSTYL
Sbjct: 82 LGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYL 141
Query: 141 PDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDK 200
PD+KVAVFYGGVNIKVHK+LLKNECP IVVGTPGRILAL R+K+L LKNVRHF+LDECDK
Sbjct: 142 PDLKVAVFYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDK 201
Query: 201 MLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 260
MLESLDMR+DVQ+IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH
Sbjct: 202 MLESLDMRKDVQDIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 261
Query: 261 GLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 320
GLVQHYIKL++ EKNRKLNDLLDALDFNQVVIFVKSVSRAAEL++LL+ECNFPSICIHSG
Sbjct: 262 GLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSG 321
Query: 321 MSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 380
MSQEERLKRY+GFKEG RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR
Sbjct: 322 MSQEERLKRYRGFKEGHSRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 381
Query: 381 FGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDTATYMPN 426
FGTKGLAITFVS S D +VLN VQSRFE+DIK+LPEQIDT+TYMP+
Sbjct: 382 FGTKGLAITFVSCSSDVDVLNNVQSRFEIDIKQLPEQIDTSTYMPS 427
>Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561636 | 20130731
Length = 314
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/225 (91%), Positives = 215/225 (95%), Gaps = 2/225 (0%)
Query: 23 KAPDS--AKPAAETAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 80
KAPD+ AK E KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI
Sbjct: 22 KAPDTNGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Query: 81 LGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYL 140
LGMDVICQAKSGMGKTAVFVLS+LQQIDPVPGQV+ALVLCHTRELAYQICHEFERFSTYL
Sbjct: 82 LGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYL 141
Query: 141 PDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDK 200
PD+KVAVFYGGVNIKVHK+LLKNECP IVVGTPGRILAL R+K+L LKNVRHF+LDECDK
Sbjct: 142 PDLKVAVFYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDK 201
Query: 201 MLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQD 245
MLESLDMR+DVQ+IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQD
Sbjct: 202 MLESLDMRKDVQDIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
>Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49558567 | 20130731
Length = 314
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/225 (91%), Positives = 215/225 (95%), Gaps = 2/225 (0%)
Query: 23 KAPDS--AKPAAETAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 80
KAPD+ AK E KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI
Sbjct: 22 KAPDTNGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI 81
Query: 81 LGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYL 140
LGMDVICQAKSGMGKTAVFVLS+LQQIDPVPGQV+ALVLCHTRELAYQICHEFERFSTYL
Sbjct: 82 LGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYL 141
Query: 141 PDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDK 200
PD+KVAVFYGGVNIKVHK+LLKNECP IVVGTPGRILAL R+K+L LKNVRHF+LDECDK
Sbjct: 142 PDLKVAVFYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDK 201
Query: 201 MLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQD 245
MLESLDMR+DVQ+IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQD
Sbjct: 202 MLESLDMRKDVQDIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQD 246
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 231/397 (58%), Gaps = 10/397 (2%)
Query: 30 PAAETAKKG--YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVIC 87
PAA+T + + F D+ LK ELL I + GFE PS +Q E IP A+ G D++
Sbjct: 132 PAADTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILA 191
Query: 88 QAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAV 147
+AK+G GKTA F + +L++ID + ++L TRELA Q + +L I+V V
Sbjct: 192 RAKNGTGKTAAFSIPALEKIDQDKNVIQVVILVPTRELALQTSQVCKELGKHL-QIQVMV 250
Query: 148 FYGGVNIKVHKELLKNECP-HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLD 206
GG ++K ++++ P H++VGTPGRIL L + LK+ ++DE DK+L S +
Sbjct: 251 TTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLL-SPE 307
Query: 207 MRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 266
+ ++++ + P ++Q+++FSAT ++ ++++ P I + DE LTL G+ Q Y
Sbjct: 308 FKPSIEQLIQFLPSNRQILLFSATFPVTVKDFNDRYLRKPYIINLMDE--LTLKGITQFY 365
Query: 267 IKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER 326
+++ +K LN L L NQ +IF SV+R L K + E + IH+ M Q+ R
Sbjct: 366 AFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 425
Query: 327 LKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 386
+ + F+ G R LV TDL RGIDI+ VN+VIN+D P +++TYLHRVGR+GRFG GL
Sbjct: 426 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGL 485
Query: 387 AITFVSSSGDSEVLNQVQSRFEVDIKELPEQIDTATY 423
A+ V+ D L +++ +IK++P ID A Y
Sbjct: 486 AVNLVTYE-DRFNLYRIEQELGTEIKQIPPFIDQAIY 521
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 228/391 (58%), Gaps = 14/391 (3%)
Query: 34 TAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGM 93
TA KG + F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G
Sbjct: 137 TATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 190
Query: 94 GKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 153
GKTA F + +L++ID + ++L TRELA Q + +L I+V V GG +
Sbjct: 191 GKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQVCKELGKHL-QIQVMVTTGGTS 249
Query: 154 IKVHKELLKNECP-HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQ 212
+K ++++ P H++VGTPGRIL L + LK+ ++DE DK+L S + + ++
Sbjct: 250 LK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLL-SPEFQPSIE 306
Query: 213 EIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDS 272
++ + P +Q++MFSAT ++ ++++ P I + DE LTL G+ Q Y +++
Sbjct: 307 QLIQFLPPTRQILMFSATFPVTVKDFKDRYLRKPYIINLMDE--LTLKGITQFYAFVEER 364
Query: 273 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKG 332
+K LN L L NQ +IF SV+R L K + E + IH+ M Q+ R + +
Sbjct: 365 QKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHD 424
Query: 333 FKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
F+ G R LV TDL RGIDI+ VN+VIN+D P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 425 FRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT 484
Query: 393 SSGDSEVLNQVQSRFEVDIKELPEQIDTATY 423
D L +++ +IK++P ID A Y
Sbjct: 485 YE-DRFNLYRIEQELGTEIKQIPPFIDQAVY 514
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/391 (38%), Positives = 228/391 (58%), Gaps = 14/391 (3%)
Query: 34 TAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGM 93
TA KG + F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G
Sbjct: 135 TATKG------NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 188
Query: 94 GKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 153
GKTA F + +L++ID + ++L TRELA Q + +L I+V V GG +
Sbjct: 189 GKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQVCKELGKHL-QIQVMVTTGGTS 247
Query: 154 IKVHKELLKNECP-HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQ 212
+K ++++ P H++VGTPGRIL L + LK+ ++DE DK+L S + + ++
Sbjct: 248 LK--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLVMDEADKLL-SPEFQPSIE 304
Query: 213 EIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDS 272
++ + P +Q++MFSAT ++ ++++ P I + DE LTL G+ Q Y +++
Sbjct: 305 QLIQFLPPTRQILMFSATFPVTVKDFKDRYLRKPYIINLMDE--LTLKGITQFYAFVEER 362
Query: 273 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKG 332
+K LN L L NQ +IF SV+R L K + E + IH+ M Q+ R + +
Sbjct: 363 QKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHD 422
Query: 333 FKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
F+ G R LV TDL RGIDI+ VN+VIN+D P +++TYLHRVGR+GRFG GLA+ ++
Sbjct: 423 FRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLIT 482
Query: 393 SSGDSEVLNQVQSRFEVDIKELPEQIDTATY 423
D L +++ +IK++P ID A Y
Sbjct: 483 YE-DRFNLYRIEQELGTEIKQIPPFIDQAIY 512
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 210/368 (57%), Gaps = 6/368 (1%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L+ LLR I GFE PS +Q I I G+DVI QA+SG GKTA F LQQ+D
Sbjct: 47 LQENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYSV 106
Query: 112 GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVG 171
+ ALVL TRELA QI YL +KV GG +++ + +L + H+VVG
Sbjct: 107 TECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV-HVVVG 164
Query: 172 TPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATL 231
TPGR+ + R + L ++ F+LDE D+ML S + + +IF+L P QV +FSAT+
Sbjct: 165 TPGRVFDMLRRQSLRPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPSKIQVGVFSATM 223
Query: 232 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRKLNDLLDALDFNQV 290
E + +KFM P+ I V + +LTL G+ Q Y+ + E K L DL + L Q
Sbjct: 224 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVDKEEWKLDTLCDLYETLAITQS 282
Query: 291 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRG 350
VIFV + + L + + H M Q R + F+ G R+L+ TDL+ RG
Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
Query: 351 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVD 410
ID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV++ D +L+ +Q + V
Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTD-DERMLSDIQKFYNVL 401
Query: 411 IKELPEQI 418
I+ELP +
Sbjct: 402 IEELPSNV 409
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 213/381 (55%), Gaps = 7/381 (1%)
Query: 39 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAV 98
Y +H + F L LLR I GFE PS +Q I I G+DVI QA+SG GKTA
Sbjct: 35 YDEVHET-FDAMGLLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTAT 93
Query: 99 FVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHK 158
F LQQ+D Q ALVL TRELA QI YL +KV GG +++ +
Sbjct: 94 FCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQ 152
Query: 159 ELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLT 218
+L+ H+VVGTPGR+ + R + L ++ F+LDE D+ML S + + +IF+L
Sbjct: 153 RILQTGV-HVVVGTPGRVFDMLRRQSLRSDCIKMFVLDEADEML-SRGFKDQIYDIFQLL 210
Query: 219 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRK 277
P QV +FSAT+ E + +KFM P+ I V + +LTL G+ Q Y+ + E K
Sbjct: 211 PPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVDKEEWKLET 269
Query: 278 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGK 337
L DL + L Q VIFV + + L + + H M Q R + F+ G
Sbjct: 270 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGS 329
Query: 338 QRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDS 397
R+L+ TDL+ RGID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV+ D+
Sbjct: 330 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLE-DA 388
Query: 398 EVLNQVQSRFEVDIKELPEQI 418
+L +Q + V ++ELP +
Sbjct: 389 RMLADIQKFYNVIVEELPSNV 409
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 208/368 (56%), Gaps = 6/368 (1%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L LLR I GFE PS +Q I I G+DVI QA+SG GKTA F LQQ+D
Sbjct: 31 LLENLLRGIYAYGFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 90
Query: 112 GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVG 171
Q ALVL TRELA QI YL +KV GG +++ + +L+ H+VVG
Sbjct: 91 VQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILQTGV-HVVVG 148
Query: 172 TPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATL 231
TPGR+ + R + L ++ F+LDE D+ML S + + +IF+L P QV +FSAT+
Sbjct: 149 TPGRVFDMLRRQSLRSDCIKMFVLDEADEML-SRGFKDQIYDIFQLLPPKIQVGVFSATM 207
Query: 232 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRKLNDLLDALDFNQV 290
E + +KFM P+ I V + +LTL G+ Q Y+ + E K L DL + L Q
Sbjct: 208 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQS 266
Query: 291 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRG 350
VIFV + + L + + H M Q R + F+ G R+L+ TDL+ RG
Sbjct: 267 VIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 326
Query: 351 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVD 410
ID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV+ D+ +L +Q + V
Sbjct: 327 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLE-DARMLADIQKFYNVI 385
Query: 411 IKELPEQI 418
++ELP +
Sbjct: 386 VEELPSNV 393
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 206/368 (55%), Gaps = 6/368 (1%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ+D
Sbjct: 47 LAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYNV 106
Query: 112 GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVG 171
Q ALVL TRELA QI YL +KV GG +++ + +L H+VVG
Sbjct: 107 TQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSTGV-HVVVG 164
Query: 172 TPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATL 231
TPGR+ + R + L ++ F+LDE D+ML S + + +IF+L P QV +FSAT+
Sbjct: 165 TPGRVFDMLRRQSLHPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPGKIQVGVFSATM 223
Query: 232 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRKLNDLLDALDFNQV 290
E + +KFM P+ I V + +LTL G+ Q Y+ ++ E K L DL + L Q
Sbjct: 224 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQS 282
Query: 291 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRG 350
VIFV + + L + + H M Q R + F+ G R+L+ TDL+ RG
Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
Query: 351 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVD 410
ID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI FV+ D +L +Q + V
Sbjct: 343 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKE-DEGMLRDIQKFYNVL 401
Query: 411 IKELPEQI 418
++ELP +
Sbjct: 402 VEELPSNV 409
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 206/368 (55%), Gaps = 6/368 (1%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ+D
Sbjct: 64 LAENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYNV 123
Query: 112 GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVG 171
Q ALVL TRELA QI YL +KV GG +++ + +L H+VVG
Sbjct: 124 TQCQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSTGV-HVVVG 181
Query: 172 TPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATL 231
TPGR+ + R + L ++ F+LDE D+ML S + + +IF+L P QV +FSAT+
Sbjct: 182 TPGRVFDMLRRQSLHPDYIKMFVLDEADEML-SRGFKDQIYDIFQLLPGKIQVGVFSATM 240
Query: 232 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRKLNDLLDALDFNQV 290
E + +KFM P+ I V + +LTL G+ Q Y+ ++ E K L DL + L Q
Sbjct: 241 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQS 299
Query: 291 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRG 350
VIFV + + L + + H M Q R + F+ G R+L+ TDL+ RG
Sbjct: 300 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 359
Query: 351 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVD 410
ID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI FV+ D +L +Q + V
Sbjct: 360 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKE-DEGMLRDIQKFYNVL 418
Query: 411 IKELPEQI 418
++ELP +
Sbjct: 419 VEELPSNV 426
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/368 (39%), Positives = 207/368 (56%), Gaps = 6/368 (1%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ+D
Sbjct: 47 LQENLLRGIYAYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 106
Query: 112 GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVG 171
Q ALVL TRELA QI +L +KV GG +++ + +L+ H VVG
Sbjct: 107 VQCQALVLAPTRELAQQIEKVMRALGDFL-GVKVHACVGGTSVREDQRILQAGV-HTVVG 164
Query: 172 TPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATL 231
TPGR+ + R + L + ++ F+LDE D+ML S + + +IF+ P QV +FSAT+
Sbjct: 165 TPGRVFDMLRRQSLRSECIKMFVLDEADEML-SRGFKDQIYDIFQQLPGKIQVGVFSATM 223
Query: 232 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRKLNDLLDALDFNQV 290
E + +KFM P+ I V + +LTL G+ Q Y+ + E K L DL + L Q
Sbjct: 224 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQS 282
Query: 291 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRG 350
VIFV + + L + + H M Q R + F+ G R+L+ TDL+ RG
Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
Query: 351 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVD 410
ID+++V++VINYD+P + YLHR+GR+GRFG KG++I FV+ D+ +L +Q + V
Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTGE-DARMLADIQKFYNVT 401
Query: 411 IKELPEQI 418
I+ELP +
Sbjct: 402 IEELPSNV 409
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 214/380 (56%), Gaps = 7/380 (1%)
Query: 41 GIHSSG-FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 99
G+ + G F + +K +LLR I GFE PS +Q + I G DVI QA+SG GKT++
Sbjct: 28 GVKAIGSFEEMGIKDDLLRGIYQYGFEKPSAIQQRAVAPIIQGRDVIAQAQSGTGKTSMI 87
Query: 100 VLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKE 159
L+ Q +D +V AL++ TRELA Q ++ +I+ GG ++
Sbjct: 88 ALTVCQVVDTSVREVQALIVSPTRELASQTEKVILTIGDFI-NIQAHACIGGKSVGEDIR 146
Query: 160 LLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTP 219
L++ H+V GTPGR+ + + + L + ++ +LDE D+ML S + + ++++ P
Sbjct: 147 KLEHGV-HVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEML-SRGFKDQIYDVYRYLP 204
Query: 220 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-KNRKL 278
D QV + SATL EI + KFM DP+ I V + +LTL G+ Q ++ ++ E K L
Sbjct: 205 PDLQVCLISATLPHEILEMTNKFMTDPVRILVKRD-ELTLEGIKQFFVAVEREEWKFDTL 263
Query: 279 NDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQ 338
DL D L Q VIF + + L + + NF +H M Q ER F+ G
Sbjct: 264 CDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVSAMHGDMPQRERDAIMGEFRAGTT 323
Query: 339 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSE 398
R+L+ TD+ RG+D+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI FV S D +
Sbjct: 324 RVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD-DIK 382
Query: 399 VLNQVQSRFEVDIKELPEQI 418
+L ++ + I E+P +
Sbjct: 383 ILRDIEQYYSTQIDEMPMNV 402
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 201/378 (53%), Gaps = 21/378 (5%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F+D L L+ A G++ P E+Q E IP A+ G D+I AK+G GKT F L L
Sbjct: 11 FKDLGLPESLVEACEKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPILHA 70
Query: 107 I--DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNE 164
+ P P A V+ TRELA QI +FE + + +K AV GG+++ V + + +
Sbjct: 71 LLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEI-GVKCAVLVGGIDM-VQQSVKIAK 128
Query: 165 CPHIVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
PHI+VGTPGR+L L K L +++ +LDE D++L D + EI + P +++
Sbjct: 129 LPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNE-DFEESLNEILGMIPRERR 187
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLD 283
+FSAT++ ++ + + +++P++I + T+ L Q Y L K+ L +L
Sbjct: 188 TFLFSATMTNKVEKLQRVCLRNPVKIETSSKYS-TVDTLKQQYRFLPAKHKDCYLVYILS 246
Query: 284 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVA 343
+ + ++F ++ L +L +I I+ MSQ +RL FK G IL+
Sbjct: 247 EMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLC 306
Query: 344 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQV 403
TD+ RG+DI V++VINYD+P ++ Y+HRVGR R G G+AI+ V NQ
Sbjct: 307 TDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLV---------NQY 357
Query: 404 QSRFEVDI-----KELPE 416
+ + V I K+LPE
Sbjct: 358 ELEWYVQIEKLIGKKLPE 375
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 191/359 (53%), Gaps = 19/359 (5%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F D L P +++ I + P+ +Q + +P A+ G D++ A++G GKTA F + +Q
Sbjct: 118 FNDMCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQH 177
Query: 107 IDPVP------GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKEL 160
P G +A LVL TRELA QI E + FS L K A+ GG NI+ +
Sbjct: 178 CLAQPPIRRGDGPLA-LVLAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSE 236
Query: 161 LKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPH 220
L+ I V TPGR + + + L + + +LDE D+ML+ + ++EI + P
Sbjct: 237 LRAGV-EIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLD-MGFEPQIREIMRSLPE 294
Query: 221 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLND 280
Q ++FSAT+ EI + K+++ P+++ V + T + + Q +K+ ++EK +L D
Sbjct: 295 KHQTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTN-VSQTLVKVSENEKIDRLLD 353
Query: 281 LLD---------ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYK 331
LL F ++FV+ +R E+ + L+ ++ +H G SQ ER
Sbjct: 354 LLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALH 413
Query: 332 GFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
F+ ILVATD+ RG+D+ V+ VIN D+P + + Y+HR+GR GR G+ G+A +F
Sbjct: 414 DFRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSF 472
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 203/378 (53%), Gaps = 21/378 (5%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F+D L L+ A G+++P ++Q E IP A+ G D+I A++G GKT F L L
Sbjct: 11 FKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPILHA 70
Query: 107 I--DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNE 164
+ P P A V+ TRELA QI +FE + + +K AV GG+++ V + + +
Sbjct: 71 LLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEI-GVKCAVLVGGIDM-VQQSVKIAK 128
Query: 165 CPHIVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
PHI+VGTPGR+L L K L +++ +LDE D++L D + EI + P +++
Sbjct: 129 LPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNE-DFEESLNEILGMIPRERR 187
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLD 283
+FSAT++K++ + + +++P++I + T+ L Q Y L K+ L +L
Sbjct: 188 TFLFSATMTKKVEKLQRVCLRNPVKIETSSKYS-TVDTLKQQYRFLPAKHKDCYLVYILT 246
Query: 284 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVA 343
+ + ++F ++ L +L +I I+ MSQ +RL FK G IL+
Sbjct: 247 EMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLC 306
Query: 344 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQV 403
TD+ RG+DI V++VINYD+P ++ Y+HRVGR R G G+AI+ V NQ
Sbjct: 307 TDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLV---------NQY 357
Query: 404 QSRFEVDI-----KELPE 416
+ + V I K+LPE
Sbjct: 358 ELEWYVQIEKLIGKKLPE 375
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/378 (33%), Positives = 203/378 (53%), Gaps = 21/378 (5%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F+D L L+ A G+++P ++Q E IP A+ G D+I A++G GKT F L L
Sbjct: 11 FKDLGLPESLVEACEKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPILHA 70
Query: 107 I--DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNE 164
+ P P A V+ TRELA QI +FE + + +K AV GG+++ V + + +
Sbjct: 71 LLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEI-GVKCAVLVGGIDM-VQQSVKIAK 128
Query: 165 CPHIVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
PHI+VGTPGR+L L K L +++ +LDE D++L D + EI + P +++
Sbjct: 129 LPHIIVGTPGRVLDHLKNTKGFSLARLKYLVLDEADRLLNE-DFEESLNEILGMIPRERR 187
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLD 283
+FSAT++K++ + + +++P++I + T+ L Q Y L K+ L +L
Sbjct: 188 TFLFSATMTKKVEKLQRVCLRNPVKIETSSKYS-TVDTLKQQYRFLPAKHKDCYLVYILT 246
Query: 284 ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVA 343
+ + ++F ++ L +L +I I+ MSQ +RL FK G IL+
Sbjct: 247 EMAGSTSMVFTRTCDSTRLLALILRNLGLKAIPINGHMSQPKRLGALNKFKSGDCNILLC 306
Query: 344 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQV 403
TD+ RG+DI V++VINYD+P ++ Y+HRVGR R G G+AI+ V NQ
Sbjct: 307 TDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLV---------NQY 357
Query: 404 QSRFEVDI-----KELPE 416
+ + V I K+LPE
Sbjct: 358 ELEWYVQIEKLIGKKLPE 375
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 194/371 (52%), Gaps = 39/371 (10%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ELL+A+ +G++ PS +Q IP + DVI A++G GKTA FVL L I +P
Sbjct: 293 LSQELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 352
Query: 112 G--------QVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKN 163
A+V+ TRELA QI E +F+ Y+ IKV GG +I+ ++
Sbjct: 353 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYM-GIKVVSIVGGQSIEEQGFKIRQ 411
Query: 164 ECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKML--------------------- 202
C IV+ TPGR++ + L + +LDE D+M+
Sbjct: 412 GC-EIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLK 470
Query: 203 -ESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 261
E+ D D + I++ T MFSAT+ + + +K++++P+ + + K T
Sbjct: 471 PENEDEELDEKRIYRTT------YMFSATMPPAVERLARKYLRNPVVVTIGTAGKAT-DL 523
Query: 262 LVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 321
+ QH I +++SEKN KL LLD L+ ++FV + A L K L + + +H G
Sbjct: 524 ISQHVIMMKESEKNYKLQRLLDELNDKTAIVFVNTKKSADFLAKNLDKEGYRVTTLHGGK 583
Query: 322 SQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 381
SQ++R +GF+ + +LVATD+ GRGIDI V VINYDMP + + Y HR+GR GR
Sbjct: 584 SQDQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 643
Query: 382 GTKGLAITFVS 392
G G+A TF++
Sbjct: 644 GKTGVATTFLT 654
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 190/357 (53%), Gaps = 19/357 (5%)
Query: 49 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID 108
D L P +++ I + P+ +Q + +P A+ G D++ A++G GKTA F + +Q
Sbjct: 89 DQCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCL 148
Query: 109 PVP------GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLK 162
P G +A LVL TRELA QI E + FS L K A+ GG NI+ + L+
Sbjct: 149 AQPPIRRGDGPLA-LVLAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELR 207
Query: 163 NECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDK 222
I V TPGR + + + L + + +LDE D+ML+ + ++EI + P
Sbjct: 208 AGV-EIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLD-MGFEPQIREIMRSLPEKH 265
Query: 223 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLL 282
Q ++FSAT+ EI + K+++ P+++ V + T + + Q +K+ ++EK +L DLL
Sbjct: 266 QTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTN-VSQTLVKVSENEKIDRLLDLL 324
Query: 283 D---------ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGF 333
F ++FV+ +R E+ + L+ ++ +H G SQ ER F
Sbjct: 325 VEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDF 384
Query: 334 KEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
+ ILVATD+ RG+D+ V+ VIN D+P + + Y+HR+GR GR G+ G+A +F
Sbjct: 385 RSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSF 441
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/355 (32%), Positives = 188/355 (52%), Gaps = 11/355 (3%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F D +L + +GF P+ +Q + P A+ G D+I A++G GKT ++L ++
Sbjct: 97 FSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 156
Query: 107 I------DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKEL 160
+ DP G + LVL TRELA QI E +F IK YGGV
Sbjct: 157 VNAQPILDPGDGPIV-LVLAPTRELAVQIQQEATKFGAS-SRIKSTCIYGGVPKGPQVRD 214
Query: 161 LKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPH 220
L+ I++ TPGR++ + L+ V + +LDE D+ML+ + +++I
Sbjct: 215 LQKGV-EIIIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLD-MGFDPQIRKIVSQIRP 272
Query: 221 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLND 280
D+Q + +SAT KE+ + ++F+ +P ++ + E H + Q+ + + +K KL
Sbjct: 273 DRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVK 332
Query: 281 LL-DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQR 339
LL D +D ++++IF+ + ++ + L +P++ IH SQ ER FK GK
Sbjct: 333 LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSP 392
Query: 340 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
I+ ATD+ RG+D++ V VINYD P S + Y+HR+GR GR G KG A TF +++
Sbjct: 393 IMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAA 447
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 193/371 (52%), Gaps = 41/371 (11%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L E+L+A+ +G++ PS +Q IP + DVI A++G GKTA FVL L I +P
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 112 G--------QVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKN 163
A+V+ TRELA QI E +F+ Y+ IKV GG +I+ ++
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYM-GIKVVSIVGGQSIEEQGFKIRQ 373
Query: 164 ECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKML--------------------- 202
C IV+ TPGR++ + L + +LDE D+M+
Sbjct: 374 GC-EIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLK 432
Query: 203 -ESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 261
E+ D D + I++ T MFSAT+ + + +K++++P+ + + K T
Sbjct: 433 PENEDEELDEKRIYRTT------YMFSATMPPGVERLARKYLRNPVVVTIGTAGKAT-DL 485
Query: 262 LVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 321
+ QH I +++SEKN L+ LLD L+ ++FV + A L K L + +H G
Sbjct: 486 ISQHVIMMKESEKNYNLHRLLDQLNDKTAIVFVNTKKSADFLAKNL--EGYRVTTLHGGK 543
Query: 322 SQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 381
SQ++R +GF+ + +LVATD+ GRGIDI V VINYDMP + + Y HR+GR GR
Sbjct: 544 SQDQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 603
Query: 382 GTKGLAITFVS 392
G G+A TF++
Sbjct: 604 GKTGVATTFLT 614
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 193/371 (52%), Gaps = 41/371 (11%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L E+L+A+ +G++ PS +Q IP + DVI A++G GKTA FVL L I +P
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 112 G--------QVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKN 163
A+V+ TRELA QI E +F+ Y+ IKV GG +I+ ++
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYM-GIKVVSIVGGQSIEEQGFKIRQ 373
Query: 164 ECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKML--------------------- 202
C IV+ TPGR++ + L + +LDE D+M+
Sbjct: 374 GC-EIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLK 432
Query: 203 -ESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 261
E+ D D + I++ T MFSAT+ + + +K++++P+ + + K T
Sbjct: 433 PENEDEELDEKRIYRTT------YMFSATMPPGVERLARKYLRNPVVVTIGTAGKAT-DL 485
Query: 262 LVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 321
+ QH I +++SEKN L+ LLD L+ ++FV + A L K L + +H G
Sbjct: 486 ISQHVIMMKESEKNYNLHRLLDQLNDKTAIVFVNTKKSADFLAKNL--EGYRVTTLHGGK 543
Query: 322 SQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 381
SQ++R +GF+ + +LVATD+ GRGIDI V VINYDMP + + Y HR+GR GR
Sbjct: 544 SQDQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 603
Query: 382 GTKGLAITFVS 392
G G+A TF++
Sbjct: 604 GKTGVATTFLT 614
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 193/371 (52%), Gaps = 41/371 (11%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L E+L+A+ +G++ PS +Q IP + DVI A++G GKTA FVL L I +P
Sbjct: 255 LSQEILKAVEKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLP 314
Query: 112 G--------QVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKN 163
A+V+ TRELA QI E +F+ Y+ IKV GG +I+ ++
Sbjct: 315 PISEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYM-GIKVVSIVGGQSIEEQGFKIRQ 373
Query: 164 ECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKML--------------------- 202
C IV+ TPGR++ + L + +LDE D+M+
Sbjct: 374 GC-EIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLK 432
Query: 203 -ESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 261
E+ D D + I++ T MFSAT+ + + +K++++P+ + + K T
Sbjct: 433 PENEDEELDEKRIYRTT------YMFSATMPPGVERLARKYLRNPVVVTIGTAGKAT-DL 485
Query: 262 LVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGM 321
+ QH I +++SEKN L+ LLD L+ ++FV + A L K L + +H G
Sbjct: 486 ISQHVIMMKESEKNYNLHRLLDQLNDKTAIVFVNTKKSADFLAKNL--EGYRVTTLHGGK 543
Query: 322 SQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 381
SQ++R +GF+ + +LVATD+ GRGIDI V VINYDMP + + Y HR+GR GR
Sbjct: 544 SQDQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRA 603
Query: 382 GTKGLAITFVS 392
G G+A TF++
Sbjct: 604 GKTGVATTFLT 614
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 184/354 (51%), Gaps = 30/354 (8%)
Query: 68 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVA------------ 115
P+ VQ IP ++ G D++ A++G GKTA F + I + GQ A
Sbjct: 167 PTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGI--MTGQPAQRPPRGVRTVCP 224
Query: 116 -ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPG 174
ALVL TREL+ QI E +FS Y ++V V YGG I L+ I+V TPG
Sbjct: 225 LALVLSPTRELSMQIHEEARKFS-YQTGVRVVVAYGGAPINQQLRELERGV-DILVATPG 282
Query: 175 RILALTRDKDLGLKNVRHFILDECDKMLE---SLDMRRDVQEIFKLTPHDKQVMMFSATL 231
R++ L + L +R+ LDE D+ML+ +R+ V+++ +Q M+FSAT
Sbjct: 283 RLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATF 342
Query: 232 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK-LQDSEKNRKLNDLLDALDFNQV 290
KEI+ + F+ + + + V T L+ ++ +Q+S+K L DLL A N V
Sbjct: 343 PKEIQRLASDFLSNYIFLAVGRVGSST--DLIDQRVEYVQESDKRSHLMDLLHAQRANGV 400
Query: 291 -------VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVA 343
++FV++ A L L NFP+ IH SQ+ER + FK G ILVA
Sbjct: 401 QGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVA 460
Query: 344 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDS 397
TD+ RG+DI V V+N+D+P+ D Y+HR+GR GR G KGLA F + + S
Sbjct: 461 TDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTS 514
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 184/354 (51%), Gaps = 30/354 (8%)
Query: 68 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVA------------ 115
P+ VQ IP ++ G D++ A++G GKTA F + I + GQ A
Sbjct: 167 PTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGI--MTGQPAQRPPRGVRTVCP 224
Query: 116 -ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPG 174
ALVL TREL+ QI E +FS Y ++V V YGG I L+ I+V TPG
Sbjct: 225 LALVLSPTRELSMQIHEEARKFS-YQTGVRVVVAYGGAPINQQLRELERGV-DILVATPG 282
Query: 175 RILALTRDKDLGLKNVRHFILDECDKMLE---SLDMRRDVQEIFKLTPHDKQVMMFSATL 231
R++ L + L +R+ LDE D+ML+ +R+ V+++ +Q M+FSAT
Sbjct: 283 RLVDLLERARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGVRQTMLFSATF 342
Query: 232 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIK-LQDSEKNRKLNDLLDALDFNQV 290
KEI+ + F+ + + + V T L+ ++ +Q+S+K L DLL A N V
Sbjct: 343 PKEIQRLASDFLSNYIFLAVGRVGSST--DLIDQRVEYVQESDKRSHLMDLLHAQRANGV 400
Query: 291 -------VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVA 343
++FV++ A L L NFP+ IH SQ+ER + FK G ILVA
Sbjct: 401 QGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVA 460
Query: 344 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDS 397
TD+ RG+DI V V+N+D+P+ D Y+HR+GR GR G KGLA F + + S
Sbjct: 461 TDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTS 514
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 207/372 (55%), Gaps = 13/372 (3%)
Query: 44 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSS 103
++ F D L ++ + G + P VQ CIPQ + G VI ++G GKTA F L
Sbjct: 51 TATFSDLGLSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFALPI 110
Query: 104 LQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN-IKVHKELLK 162
LQ++ V ALV+ TRELA+Q+ +F + L +++AV GG++ ++ KEL+
Sbjct: 111 LQRLAEHTFGVFALVVTPTRELAFQLAEQFRALGSSL-RLRIAVVVGGMDMLRQTKELVA 169
Query: 163 NECPHIVVGTPGRILALTRDK-DLG--LKNVRHFILDECDKMLESLDMRRDVQEIFKLTP 219
PH+V+ TPGRI L +D ++ + +LDE D++L+ + + +++ IF+ P
Sbjct: 170 R--PHLVIATPGRIKVLLKDNPEIAPVFARTKFLVLDEADRVLD-VGFQDELKFIFQCLP 226
Query: 220 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLN 279
++Q + FSAT + ++ + +++ QD + + E T+ L Q + + + K+ L
Sbjct: 227 ENRQNLFFSATTTSNLQKLRERY-QDKLYAFEAYEGFKTVENLKQQVVFIPKNVKDVYLL 285
Query: 280 DLLDALD---FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEG 336
+L ++ ++FV + LN +L + + ++S SQ +RL+ FK G
Sbjct: 286 HILSKMEDMGIRSAIVFVSTCRDCHRLNLMLEVLDQEAAALYSFRSQAQRLEALHDFKSG 345
Query: 337 KQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGD 396
K +L+ATD+ GRG+DI V++VINYD+P Y+HRVGR R G GLA++ V+ + D
Sbjct: 346 KVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQN-D 404
Query: 397 SEVLNQVQSRFE 408
+++ ++++ E
Sbjct: 405 VDLIREIETLIE 416
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 187/370 (50%), Gaps = 26/370 (7%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F + L +L I + P+ VQ IP A+ G D++ A++G GKTA F +
Sbjct: 141 FAETELHEDLKNNIERCKYVKPTPVQRYAIPIAVAGRDLMACAQTGSGKTAAFCFPIISG 200
Query: 107 ID---------PVPGQV-------AALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYG 150
I P G V AL+L TREL+ QI E +F+ + +K+AV YG
Sbjct: 201 IMKERLASGLLPRGGGVDSDVAFPTALILSPTRELSCQIHAEACKFA-HQTGVKIAVVYG 259
Query: 151 GVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLE---SLDM 207
G I +L+ I+V TPGR++ L + + LK +++ LDE D+ML+ +
Sbjct: 260 GAPIGQQLRILERGV-DILVATPGRLVDLIERERVSLKKIKYLALDEADRMLDMGFEHQI 318
Query: 208 RRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYI 267
R VQ++ P D+Q ++FSAT I+ + F+ + + + V T +VQ
Sbjct: 319 RNIVQQMHMPPPGDRQTLLFSATFPDNIQKLASDFLSNYVFLAVGRVGSST-ELIVQKIE 377
Query: 268 KLQDSEKNRKLNDLLDALDFNQ----VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQ 323
+QD EK +L DLL N ++FV++ A L L NFP+I IH Q
Sbjct: 378 SVQDMEKRTRLVDLLRRNVVNGKLALTLVFVETKKGADALENWLCRINFPAIAIHGDKVQ 437
Query: 324 EERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGT 383
ER + + FK G I+VATD+ RG+DI V VIN+D+P D Y+HR+GR GR G
Sbjct: 438 MERERALRSFKRGLTPIMVATDVASRGLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGQ 497
Query: 384 KGLAITFVSS 393
GLA F S+
Sbjct: 498 SGLATAFFST 507
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 183/350 (52%), Gaps = 23/350 (6%)
Query: 65 FEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI-------DPVPGQVA-- 115
+ P+ VQ IP ++ G D++ A++G GKTA F + I P + A
Sbjct: 173 YVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGILTEQYAQRPRVARTAYP 232
Query: 116 -ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPG 174
AL+L TREL+ QI E ++FS Y +KV V YGG I L+ I+V TPG
Sbjct: 233 LALILSPTRELSCQIHDEAKKFS-YQTGVKVVVAYGGAPITQQLRELERGV-DILVATPG 290
Query: 175 RILALTRDKDLGLKNVRHFILDECDKMLE---SLDMRRDVQEIFKLTPHDKQVMMFSATL 231
R++ L + L+ +R+ LDE D+ML+ +R+ V+++ P +Q ++FSAT
Sbjct: 291 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGMRQTLLFSATF 350
Query: 232 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQV- 290
KEI+ + F+ + + V T + Q + +S+K L DLL A N V
Sbjct: 351 PKEIQRLASDFLASYIFLAVGRVGSST-DLIAQRVEYVLESDKRSHLMDLLHAQRENDVN 409
Query: 291 ------VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVAT 344
++FV++ A L L FP+ CIH +Q+ER + + FK G ILVAT
Sbjct: 410 GKQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREQALRSFKTGNTPILVAT 469
Query: 345 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
D+ RG+DI RV V+N+D+P+ D Y+HR+GR GR G GLA F + S
Sbjct: 470 DVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFNDS 519
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 208/405 (51%), Gaps = 31/405 (7%)
Query: 33 ETAKKGYVGIHSSG-FRDFLLKPELLRAI-VDSGFEHPSEVQHECIPQAILG---MDVIC 87
ET GY S+ F + L PELL+ + V+ GF PS++Q +P IL D+I
Sbjct: 41 ETVNSGYSPYTSAATFEELSLSPELLKGLYVEMGFIKPSKIQEITLPM-ILNPPHKDLIA 99
Query: 88 QAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAV 147
QA++G GKT FVL L ++DP AL +C TRELA Q ++ Y I +
Sbjct: 100 QARNGSGKTTCFVLGMLSRVDPNMKAPQALCICPTRELAIQNNEVLQKMGKYT-GISSEL 158
Query: 148 FYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDM 207
++ K+ +V+GTPG I +L K LG+ ++ + DE D+ML + +
Sbjct: 159 AIPSMD-KIPPSRRPPIMAQVVIGTPGTINSLKNHKKLGVTRLKILVFDEADQMLAQMMV 217
Query: 208 RRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFM--QDPMEIYVDDEAKLTLHGLVQH 265
+D QV++FSAT ++ + + ++ E +V E +L+L + Q+
Sbjct: 218 TKDWLVFL-------QVLLFSATFDDTVKNFATRIVAKKEHNEYFVKKE-ELSLEAVKQY 269
Query: 266 YIKLQDS-EKNRKLNDLLDALDFN--QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 322
+K D K + D + L N Q +IFV++ + A L+K LV+ + I +
Sbjct: 270 KVKCTDELAKIEVIKDYIFELGENVGQTIIFVRTRNSAKMLHKSLVDFGYEVTSIQGALQ 329
Query: 323 QEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMP----------DSADTYL 372
EER K FK+G ++L++TD++ RG D ++VN+VINYD+P + YL
Sbjct: 330 TEERDTIIKEFKDGLTQVLISTDVLSRGFDQDQVNLVINYDLPLKYTRGQEPEPDCEVYL 389
Query: 373 HRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELPEQ 417
HRVGRAGRFG KG + + V+++++ F + ++E+ E+
Sbjct: 390 HRVGRAGRFGRKGAVFNLICHESEQMVMSKIEEHFGIHVEEVREK 434
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 186/359 (51%), Gaps = 14/359 (3%)
Query: 42 IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL 101
H + F D+ L I GF P+ +Q + P A+ G D+I A++G GKT ++L
Sbjct: 203 FHEANFPDYCLD-----VIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLL 257
Query: 102 SSLQQIDPVPGQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKV 156
++ + P V LVL TRELA QI E +F + +I+ YGG
Sbjct: 258 PAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRS-NIRCTCIYGGAPKGP 316
Query: 157 HKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFK 216
L+ IV+ TPGR++ + + L+ V + +LDE D+ML+ + +++I
Sbjct: 317 QIRDLRMGV-EIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLD-MGFEPQIRKIVN 374
Query: 217 LTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEK-N 275
D+Q + +SAT KE+ + ++F+ +P ++ + + Q + D EK N
Sbjct: 375 QIRPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYLKANQSINQVVEVVTDMEKYN 434
Query: 276 RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKE 335
R + L + +D ++++IF ++ ++ + L +P++ IH +Q ER FK
Sbjct: 435 RLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKS 494
Query: 336 GKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
G+ I+ ATD+ RG+D++ + V+NYD P S + Y+HR+GR GR G KG A +F +S+
Sbjct: 495 GRSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFTSA 553
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 188/361 (52%), Gaps = 17/361 (4%)
Query: 39 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKT-- 96
++ S+GF PE+L+ + +GF +P+ +Q + P A+ G D++ AK+G GKT
Sbjct: 494 FMTFDSTGF-----PPEILQEVCSAGFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLG 548
Query: 97 ---AVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 153
F+L ++ + + G LVL TRELA QI E +F+ + YGG
Sbjct: 549 YLMPAFILLRQRRNNSLNGPTV-LVLAPTRELATQIQEEVFKFARSS-RVSCTCLYGGAP 606
Query: 154 IKVH-KELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQ 212
+ KEL + IVV TPGR+ + K + V +LDE D+ML+ + ++
Sbjct: 607 KALQLKELDRGA--DIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLD-MGFEPQIR 663
Query: 213 EIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-QD 271
+I P +Q +M++AT KE+R + + +P+++ + + +L + + Y+++
Sbjct: 664 KIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGNVDELAANKSITQYVEVVPQ 723
Query: 272 SEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYK 331
EK R+L +L + + +I S + + + F + IH SQ ER
Sbjct: 724 MEKQRRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFGAAAIHGDKSQGERDWVLG 783
Query: 332 GFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 391
F+ GK ILVATD+ RG+DI+ + +VINYD P+ + Y+HR+GR GR G G+A TF
Sbjct: 784 QFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFF 843
Query: 392 S 392
S
Sbjct: 844 S 844
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 188/361 (52%), Gaps = 17/361 (4%)
Query: 39 YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKT-- 96
++ S+GF PE+L+ + +GF +P+ +Q + P A+ G D++ AK+G GKT
Sbjct: 494 FMTFDSTGF-----PPEILQEVCSAGFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLG 548
Query: 97 ---AVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 153
F+L ++ + + G LVL TRELA QI E +F+ + YGG
Sbjct: 549 YLMPAFILLRQRRNNSLNGPTV-LVLAPTRELATQIQEEVFKFARSS-RVSCTCLYGGAP 606
Query: 154 IKVH-KELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQ 212
+ KEL + IVV TPGR+ + K + V +LDE D+ML+ + ++
Sbjct: 607 KALQLKELDRGA--DIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLD-MGFEPQIR 663
Query: 213 EIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-QD 271
+I P +Q +M++AT KE+R + + +P+++ + + +L + + Y+++
Sbjct: 664 KIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGNVDELAANKSITQYVEVVPQ 723
Query: 272 SEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYK 331
EK R+L +L + + +I S + + + F + IH SQ ER
Sbjct: 724 MEKQRRLEQILRSQERGSKIIIFCSTKKLCDQLARSIGRTFGAAAIHGDKSQGERDWVLG 783
Query: 332 GFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 391
F+ GK ILVATD+ RG+DI+ + +VINYD P+ + Y+HR+GR GR G G+A TF
Sbjct: 784 QFRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFF 843
Query: 392 S 392
S
Sbjct: 844 S 844
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 194/377 (51%), Gaps = 17/377 (4%)
Query: 40 VGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF 99
+ F L LL A G+ P+ +Q CIP A+ G D+ A +G GKTA F
Sbjct: 135 TSFSADSFLQLNLSRSLLLACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAF 194
Query: 100 VLSSLQQIDPVPGQVAA---LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKV 156
L +L+++ P V A L+L TRELA Q+ E + + +I+ + GGV K
Sbjct: 195 ALPTLERLLFRPKGVHAIRVLILTPTRELAVQVHSMIEELAKFTDNIRCCLIVGGVPTKG 254
Query: 157 HKELLKNECPHIVVGTPGRILALTRDK-DLGLKNVRHFILDECDKMLESLDMRRDVQEIF 215
+ L++ P IVV TPGR++ R+ + L ++ ILDE D++LE L ++QE+
Sbjct: 255 QEAALRSR-PDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLE-LGFSAEIQELV 312
Query: 216 KLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKN 275
++ P +Q M+FSAT+++E+ + K + P+ + D AK L + ++++ +
Sbjct: 313 RVCPKKRQTMLFSATMTEEVDDLIKLSLSKPVRLSADPSAKRPA-SLTEEVVRIR---RM 368
Query: 276 RKLNDLLDALDF------NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKR 329
R++N L ++V+IF + A L + + +H ++Q +RL
Sbjct: 369 REVNHEAVLLAMCTKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQAQRLDA 428
Query: 330 YKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAIT 389
+ F++ + LVATD+ RG+DI V VIN+ P +Y+HRVGR R G G A+T
Sbjct: 429 LEQFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVT 488
Query: 390 FVSSSGDSEVLNQVQSR 406
FV+ S D +L + R
Sbjct: 489 FVTDS-DRSLLKAIAKR 504
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 198/382 (51%), Gaps = 18/382 (4%)
Query: 35 AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMG 94
A + F L LLRA G+ P+ +Q CIP A+ G D+ A +G G
Sbjct: 141 APSAGTSFSADSFLQLNLSRPLLRACEVLGYSKPTPIQAACIPLALTGRDICGSAITGSG 200
Query: 95 KTAVFVLSSLQQIDPVPGQVAA---LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGG 151
KTA F L +L+++ P +V A L+L TRELA Q+ + S + DI+ + GG
Sbjct: 201 KTAAFALPTLERLLFRPKRVHAIRVLILTPTRELAAQVQSMIKSLSQFT-DIRCCLIVGG 259
Query: 152 VNIKVHKELLKNECPHIVVGTPGRILALTRDK-DLGLKNVRHFILDECDKMLESLDMRRD 210
++ K + L++ P IVV TPGR++ R+ + L ++ ILDE D++LE L +
Sbjct: 260 LSTKEQEVALRSR-PDIVVATPGRMIDHLRNSMSVDLDDLSVLILDEADRLLE-LGFSAE 317
Query: 211 VQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQ 270
+QE+ ++ P +Q M+FSAT+++E+ + K + P+ + D AK L + ++L+
Sbjct: 318 IQELVRVCPKKRQTMLFSATMTEEVDDLIKLSLSKPLRLSADPLAKRPA-SLTEEVVRLR 376
Query: 271 DSEKNRKLND------LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQE 324
+ R++N + ++V+IF + A L + + +H ++Q
Sbjct: 377 ---RMREVNQEAVLLAMCSKTFTSKVIIFSGTKQAAHRLRIIFGLSGLKAAELHGNLTQA 433
Query: 325 ERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK 384
+RL + F++ + LVATD+ RG+DI V VIN+ P +Y+HRVGR R G
Sbjct: 434 QRLGALEEFRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRA 493
Query: 385 GLAITFVSSSGDSEVLNQVQSR 406
G A+TFV+ + D +L + R
Sbjct: 494 GSAVTFVTDN-DRSLLKAIAKR 514
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 183/353 (51%), Gaps = 15/353 (4%)
Query: 44 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSS 103
SSGF E+LR + ++GF P+ +Q + P A+ D++ AK+G GKT ++L +
Sbjct: 168 SSGF-----PSEILREVQNAGFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPA 222
Query: 104 LQQIDPVPGQV----AALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKE 159
+ LVL TRELA QI E +FS I YGG +
Sbjct: 223 FIHLKRTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSK-TSRIACTCLYGGAPKGPQLK 281
Query: 160 LLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTP 219
+ + IVV TPGR+ + + + L V + +LDE D+ML+ + +++I P
Sbjct: 282 DI-DRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLD-MGFEPQIRKIVNGVP 339
Query: 220 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH-GLVQHYIKLQDSEKNRKL 278
+Q +MF+AT KE+R + + +P+++ + + +L + + QH L EK R+L
Sbjct: 340 ARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKSITQHIEVLTYVEKQRRL 399
Query: 279 NDLLDALD-FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGK 337
+L + D ++++IF + +L + L F + IH SQ +R F+ G+
Sbjct: 400 ETILRSQDQGSKIIIFCSTKKMCDQLARNLTR-QFGAAAIHGDKSQADRDHVLNQFRSGR 458
Query: 338 QRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
+LVATD+ RG+D++ + +V+N+D P + Y+HR+GR GR G G+A TF
Sbjct: 459 TPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTF 511
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 183/353 (51%), Gaps = 15/353 (4%)
Query: 44 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSS 103
SSGF E+LR + ++GF P+ +Q + P A+ D++ AK+G GKT ++L +
Sbjct: 168 SSGF-----PSEILREVQNAGFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPA 222
Query: 104 LQQIDPVPGQV----AALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKE 159
+ LVL TRELA QI E +FS I YGG +
Sbjct: 223 FIHLKRTNNNAKMGPTVLVLSPTRELATQIQDEAVKFSK-TSRIACTCLYGGAPKGPQLK 281
Query: 160 LLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTP 219
+ + IVV TPGR+ + + + L V + +LDE D+ML+ + +++I P
Sbjct: 282 DI-DRGADIVVATPGRLNDILEMRRISLHQVSYLVLDEADRMLD-MGFEPQIRKIVNGVP 339
Query: 220 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH-GLVQHYIKLQDSEKNRKL 278
+Q +MF+AT KE+R + + +P+++ + + +L + + QH L EK R+L
Sbjct: 340 ARRQTLMFTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKSITQHIEVLTYVEKQRRL 399
Query: 279 NDLLDALD-FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGK 337
+L + D ++++IF + +L + L F + IH SQ +R F+ G+
Sbjct: 400 ETILRSQDQGSKIIIFCSTKKMCDQLARNLTR-QFGAAAIHGDKSQADRDHVLNQFRSGR 458
Query: 338 QRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
+LVATD+ RG+D++ + +V+N+D P + Y+HR+GR GR G G+A TF
Sbjct: 459 TPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTF 511
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 195/370 (52%), Gaps = 23/370 (6%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS---- 102
F+D +L+ + G P+ +Q + +P + G D+I A +G GKT VFVL
Sbjct: 146 FKDMRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMM 205
Query: 103 SLQQ---IDPVPGQVA-ALVLCHTRELAYQICHEFERFSTYL-----PDIKVAVFYGGVN 153
++Q+ + VPG+ L++C +RELA Q E F L P+++ + GG++
Sbjct: 206 AMQEEIMMPIVPGEGPFGLIICPSRELARQTYEVIEEFLLPLKEAGYPELRPLLCIGGID 265
Query: 154 IKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQE 213
++ E++K HIVV TPGR+ + K + L N R+ LDE D++++ L D++E
Sbjct: 266 MRSQLEIVKKGV-HIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVD-LGFEDDIRE 323
Query: 214 IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ-HYIKLQDS 272
+F +Q ++FSAT+ +I+ + + P+ + V L + + Y+K
Sbjct: 324 VFDHFKAQRQTLLFSATMPTKIQNFARSALVKPIIVNVGRAGAANLDVIQEVEYVK---- 379
Query: 273 EKNRKLNDLLDALDFNQ--VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRY 330
+ K+ LL+ L V+IF ++ + ++++ L+ ++ IH G QEER
Sbjct: 380 -QEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAI 438
Query: 331 KGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
FK GK+ +LVATD+ +G+D + VINYDMP + Y+HR+GR GR G G+A TF
Sbjct: 439 SSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 498
Query: 391 VSSSGDSEVL 400
++ + L
Sbjct: 499 INKNQSETTL 508
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 189/357 (52%), Gaps = 18/357 (5%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F D P+++ AI G+E P+ +Q + +P + G D+I AK+G GKTA FVL +
Sbjct: 233 FEDCGFAPQIMGAIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVH 292
Query: 107 IDPVP------GQVAALVLCH-TRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKE 159
I P G + V+C TRELA+QI E ++F+ I+V+ YGG++ +
Sbjct: 293 IMDQPELQKEEGPIG--VICAPTRELAHQIYLEAKKFAKAY-GIRVSAVYGGMSKLEQFK 349
Query: 160 LLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTP 219
LK C IVV TPGR++ + + K L + + +LDE D+M + L V+ I
Sbjct: 350 ELKAGC-EIVVATPGRLIDMLKMKALAMLRATYLVLDEADRMFD-LGFEPQVRSIVGQIR 407
Query: 220 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDD--EAKLTLHGLVQHYIKLQDSEK-NR 276
D+Q ++FSAT+ +++ + ++ + DP+ + V + A + +VQ + DSEK
Sbjct: 408 PDRQTLLFSATMPRKVEKLAREILSDPIRVTVGEVGMANEDITQVVQ--VIPSDSEKLPW 465
Query: 277 KLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEG 336
L L + +D ++F + E+ L + F +H Q R+ + FK G
Sbjct: 466 LLEKLHEMIDQGDTLVFASKKATVDEIEVQLGQRGFKVAALHGDKDQSSRMDILQKFKSG 525
Query: 337 KQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK-GLAITFVS 392
+L+ATD+ RG+DI+ + V+N+D+ D ++HR+GR GR G K G+A T ++
Sbjct: 526 AYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLIT 582
>Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857813-27867050 | 20130731
Length = 456
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 173/335 (51%), Gaps = 19/335 (5%)
Query: 46 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ 105
F D L P +++ I + P+ +Q + +P A+ G D++ A++G GKTA F + +Q
Sbjct: 117 SFNDMCLHPSIMKDIAYHDYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQ 176
Query: 106 QIDPVP------GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKE 159
P G +A LVL TRELA QI E + FS L K A+ GG NI+ +
Sbjct: 177 HCLAQPPIRRGDGPLA-LVLAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRS 235
Query: 160 LLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTP 219
L+ I V TPGR + + + L + + +LDE D+ML+ + ++EI + P
Sbjct: 236 ELRAGV-EIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLD-MGFEPQIREIMRSLP 293
Query: 220 HDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLN 279
Q ++FSAT+ EI + K+++ P+++ V + T + + Q +K+ ++EK +L
Sbjct: 294 EKHQTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTN-VSQTLVKVSENEKIDRLL 352
Query: 280 DLLD---------ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRY 330
DLL F ++FV+ +R E+ + L+ ++ +H G SQ ER
Sbjct: 353 DLLVEEASQAEKCGHPFPLTIVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAAL 412
Query: 331 KGFKEGKQRILVATDLVGRGIDIERVNIVINYDMP 365
F+ ILVATD+ RG+D+ V+ VIN D+P
Sbjct: 413 HDFRSSSTSILVATDVASRGLDVTGVSHVINLDLP 447
>Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:27069344-27076281 | 20130731
Length = 491
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 214/431 (49%), Gaps = 53/431 (12%)
Query: 25 PDSAKPAAETAKKG-YVGIHSSGFRDFLLKPELLRAI-VDSGFEHPSEVQHECIPQAILG 82
PD + A TA Y ++ F + L PELL+ + V+ FE PS++Q + +P IL
Sbjct: 60 PDDSNITAVTAGDTPYTS--ATTFEELSLSPELLKGLYVEMKFEKPSKIQAKSLPM-ILN 116
Query: 83 ---MDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFERFSTY 139
D+I QA +G GKT F L L ++DP AL +C TRELA Q + Y
Sbjct: 117 PPHRDLIAQAHNGSGKTTCFNLGMLSRVDPNLQAPQALCICPTRELAIQNIEVLRKMGKY 176
Query: 140 LPDIKVAVFYGGVNIKVHKELLKNEC----------PHIVVGTPGRILALTRDKDLGLKN 189
G++ + + + + +V+GTPG + L K LG+
Sbjct: 177 T----------GISSECAVPMDRRDSIPVMKRAPIMAQVVIGTPGTMKNLITYKKLGVTK 226
Query: 190 VRHFILDECDKMLESLDMRRD----VQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFM-- 243
++ + DE D+ML R D ++EI K QV++FSAT ++ ++ + +
Sbjct: 227 LKILVFDEADQMLAEDGFRDDSLRIIKEIEKFN-SSCQVLLFSATFNETVKNFATRVVGK 285
Query: 244 QDPMEIYVDDEAKLTLHGLVQHYIKLQDS-EKNRKLNDLLDALDFN--QVVIFVKSVSRA 300
++ E++V E +L+L + Q+ + + D K + + + L N Q +IFV++ + A
Sbjct: 286 KEHNELFVKKE-ELSLDAVKQYKVLVPDELVKIDVIKNYIFELGENVGQTIIFVRTRNSA 344
Query: 301 AELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVI 360
L+K LV+ + I + +R K K FK+G ++L++TD++ RG D ++VN+VI
Sbjct: 345 KMLHKALVDLGYEVTSIQGALDHVDRDKIVKEFKDGLTQVLISTDVLARGFDQQQVNLVI 404
Query: 361 NYDMP--------------DSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSR 406
NYD+P + YLHRVGRAGRFG KG + D + L++++
Sbjct: 405 NYDLPLKYAAEYTHGHEQEPDYEVYLHRVGRAGRFGRKGAVFNLICGERDEKTLSKIEKH 464
Query: 407 FEVDIKELPEQ 417
F IKE+ ++
Sbjct: 465 FGTYIKEVKDR 475
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 199/381 (52%), Gaps = 31/381 (8%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI---- 107
+ E++ A+ G +Q + A+ G D+I +A++G GKT F + L +I
Sbjct: 96 ISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 155
Query: 108 -------DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKEL 160
DP+ ALVL TRELA Q+ EF+ + P++++ YGG+ I+
Sbjct: 156 AKNGKRRDPL-----ALVLAPTRELARQVEKEFKDAA---PNLEIISLYGGMPIQQQISK 207
Query: 161 LKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPH 220
L + IVVGTPGR++ L + L LK+V + +LDE D+ML+ + + V+ I + P
Sbjct: 208 LGSGV-DIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQ-VGFQEAVETILQKLPS 265
Query: 221 DKQVMMFSATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLQDSEKNRKLN 279
+Q +MFSAT+ I+ + + ++ P+ I V D + G+ + I K L
Sbjct: 266 KRQTLMFSATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILV 325
Query: 280 DLL-DALDFNQVVIFVKSVSRAAELNKLL---VECNFPSICIHSGMSQEERLKRYKGFKE 335
L+ + + ++F ++ A L+ ++ ++C +H +SQ +R + GF+
Sbjct: 326 PLITEHAKGGKCIVFTQTKRDADRLSHIMAKSIKCE----ALHGDISQTQRERTLTGFRN 381
Query: 336 GKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSG 395
+LVATD+ RG+DI V++VI+Y++P++++ ++HR GR GR G KG AI V +
Sbjct: 382 SYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEN 440
Query: 396 DSEVLNQVQSRFEVDIKELPE 416
S + ++ KELP+
Sbjct: 441 QSRDVKTIERDVGCKFKELPK 461
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 199/381 (52%), Gaps = 31/381 (8%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI---- 107
+ E++ A+ G +Q + A+ G D+I +A++G GKT F + L +I
Sbjct: 96 ISKEIVNALGKKGIAKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFN 155
Query: 108 -------DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKEL 160
DP+ ALVL TRELA Q+ EF+ + P++++ YGG+ I+
Sbjct: 156 AKNGKRRDPL-----ALVLAPTRELARQVEKEFKDAA---PNLEIISLYGGMPIQQQISK 207
Query: 161 LKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPH 220
L + IVVGTPGR++ L + L LK+V + +LDE D+ML+ + + V+ I + P
Sbjct: 208 LGSGV-DIVVGTPGRVIDLLKRGSLKLKDVNYVVLDEADQMLQ-VGFQEAVETILQKLPS 265
Query: 221 DKQVMMFSATLSKEIRPVCKKFMQDPMEI-YVDDEAKLTLHGLVQHYIKLQDSEKNRKLN 279
+Q +MFSAT+ I+ + + ++ P+ I V D + G+ + I K L
Sbjct: 266 KRQTLMFSATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISLYSIASNAYSKAGILV 325
Query: 280 DLL-DALDFNQVVIFVKSVSRAAELNKLL---VECNFPSICIHSGMSQEERLKRYKGFKE 335
L+ + + ++F ++ A L+ ++ ++C +H +SQ +R + GF+
Sbjct: 326 PLITEHAKGGKCIVFTQTKRDADRLSHIMAKSIKCE----ALHGDISQTQRERTLTGFRN 381
Query: 336 GKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSG 395
+LVATD+ RG+DI V++VI+Y++P++++ ++HR GR GR G KG AI V +
Sbjct: 382 SYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAI-LVHTEN 440
Query: 396 DSEVLNQVQSRFEVDIKELPE 416
S + ++ KELP+
Sbjct: 441 QSRDVKTIERDVGCKFKELPK 461
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 198/382 (51%), Gaps = 26/382 (6%)
Query: 55 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI------- 107
+++ A+ G +Q + A+ G D+I +A++G GKT F + + +I
Sbjct: 90 DIVSALEKKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKH 149
Query: 108 ----DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKN 163
DP+ ALVL TRELA Q+ EF + P++ YGG I L
Sbjct: 150 GRGKDPL-----ALVLAPTRELAKQVEKEFYEAA---PNLDTICVYGGTPISQQMRQLDY 201
Query: 164 ECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
I VGTPGRI+ L L LK V+ ILDE D+ML+ + + DV++I + P ++Q
Sbjct: 202 GV-DIAVGTPGRIIDLLNRGALNLKEVQFVILDEADQMLQ-VGFQEDVEKILERLPAERQ 259
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLL- 282
+MFSAT+ I+ + + ++++P+ I + ++ L + Y L D+ + L
Sbjct: 260 TLMFSATMPTWIKQLTRNYLKNPLTIDLVGDSDQKLADGISLYSILSDAYVKAGIIVPLI 319
Query: 283 -DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + ++F ++ A ++ + + + P +H +SQ +R + GF+ G +L
Sbjct: 320 KEHAKGGKCIVFTQTKRDADRISHGMSK-SIPCEALHGDISQIQRERTLAGFRNGHFNVL 378
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLN 401
VATD+ RG+DI V++VI+Y++P++++ ++HR GR GR G KG AI V + S L
Sbjct: 379 VATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAI-LVYTQDQSRTLR 437
Query: 402 QVQSRFEVDIKELPE-QIDTAT 422
++ ELP+ +DTA+
Sbjct: 438 TIERDVGCKFSELPKIAVDTAS 459
>Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC |
scaffold0915:3555-1057 | 20130731
Length = 282
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 161/287 (56%), Gaps = 7/287 (2%)
Query: 59 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALV 118
I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + +L++ID + ++
Sbjct: 2 GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQVVI 61
Query: 119 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP-HIVVGTPGRIL 177
L TRELA Q + +L I+V V GG ++K ++++ P H++VGTPGRIL
Sbjct: 62 LVPTRELALQTSQVCKELGKHL-QIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRIL 118
Query: 178 ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRP 237
L + LK+ ++DE DK+L S + + ++++ + P +Q++MFSAT ++
Sbjct: 119 DLAKKGVCVLKDCSMLVMDEADKLL-SPEFQPSIEQLIQFLPPTRQILMFSATFPVTVKD 177
Query: 238 VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSV 297
++++ P I + DE LTL G+ Q Y +++ +K LN L L NQ +IF SV
Sbjct: 178 FNDRYLRKPYIINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSV 235
Query: 298 SRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVAT 344
+R L K + E + IH+ M Q+ R + + F+ G R LV T
Sbjct: 236 NRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 282
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 189/364 (51%), Gaps = 23/364 (6%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ- 105
F+D +L+ + G P+ +Q + +P + G D+I A +G GKT VFVL +
Sbjct: 148 FKDMRFPDPILKMLKTKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMM 207
Query: 106 ------QIDPVPGQVA-ALVLCHTRELAYQICHEFERFSTYL-----PDIKVAVFYGGVN 153
++ VPG+ L++C + ELA Q E+F L P+++ + GG++
Sbjct: 208 AMQEEIRMPIVPGEGPFGLIICPSWELARQTYEVIEQFLLPLKEAGYPELRPLLCIGGID 267
Query: 154 IKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQE 213
++ +++K HIVV TPGR+ + K + L N R+ LDE D++++ D++E
Sbjct: 268 MRSQLKIVKKGV-HIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDP-GFEDDIRE 325
Query: 214 IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ-HYIKLQDS 272
+F +Q ++FSAT+ +I+ + + P+ + V L + + Y+K
Sbjct: 326 VFDHFKAQRQTLLFSATMPTKIQNFARSALVKPIIVNVGRAGAANLDVIQEVEYVK---- 381
Query: 273 EKNRKLNDLLDALDFNQ--VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRY 330
+ K+ LL+ L V+IF ++ + +++ L+ ++ IH QE+R
Sbjct: 382 -QEAKIVYLLECLQKTPPPVLIFCENKADVDNIHEYLLLKGVEAVAIHGDKDQEDREYAI 440
Query: 331 KGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 390
FK GK+ +LVATD+ +G+D + VINYDMP + Y+HR+GR GR G G+A TF
Sbjct: 441 SSFKTGKKDVLVATDIASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 500
Query: 391 VSSS 394
++ +
Sbjct: 501 INKN 504
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L I + FE P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
V L++ TREL QI + +F+ + I+ YGG + LK
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVM-GIRCVPVYGGSGVAQQISELKRGT- 627
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V + ++DE D+M + + + I + D+Q
Sbjct: 628 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD-MGFEPQITRIVQNIRPDRQ 686
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT--LHGLVQHYIKLQDSEKNRKLNDL 281
++FSAT +++ + +K + P+EI V + + + LV+ ++ ++ R L L
Sbjct: 687 TVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVE--VRPENERFLRLLELL 744
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + ++++FV S + L K L++ +P + +H Q +R FK +L
Sbjct: 745 GEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLL 804
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
VAT + RG+D++ + +VIN+D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 805 VATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L I + FE P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
V L++ TREL QI + +F+ + I+ YGG + LK
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVM-GIRCVPVYGGSGVAQQISELKRGT- 627
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V + ++DE D+M + + + I + D+Q
Sbjct: 628 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD-MGFEPQITRIVQNIRPDRQ 686
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT--LHGLVQHYIKLQDSEKNRKLNDL 281
++FSAT +++ + +K + P+EI V + + + LV+ ++ ++ R L L
Sbjct: 687 TVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVE--VRPENERFLRLLELL 744
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + ++++FV S + L K L++ +P + +H Q +R FK +L
Sbjct: 745 GEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLL 804
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
VAT + RG+D++ + +VIN+D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 805 VATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L I + FE P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
V L++ TREL QI + +F+ + I+ YGG + LK
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVM-GIRCVPVYGGSGVAQQISELKRGT- 627
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V + ++DE D+M + + + I + D+Q
Sbjct: 628 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD-MGFEPQITRIVQNIRPDRQ 686
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT--LHGLVQHYIKLQDSEKNRKLNDL 281
++FSAT +++ + +K + P+EI V + + + LV+ ++ ++ R L L
Sbjct: 687 TVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVE--VRPENERFLRLLELL 744
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + ++++FV S + L K L++ +P + +H Q +R FK +L
Sbjct: 745 GEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLL 804
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
VAT + RG+D++ + +VIN+D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 805 VATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L I + FE P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
V L++ TREL QI + +F+ + I+ YGG + LK
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVM-GIRCVPVYGGSGVAQQISELKRGT- 627
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V + ++DE D+M + + + I + D+Q
Sbjct: 628 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD-MGFEPQITRIVQNIRPDRQ 686
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT--LHGLVQHYIKLQDSEKNRKLNDL 281
++FSAT +++ + +K + P+EI V + + + LV+ ++ ++ R L L
Sbjct: 687 TVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVE--VRPENERFLRLLELL 744
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + ++++FV S + L K L++ +P + +H Q +R FK +L
Sbjct: 745 GEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLL 804
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
VAT + RG+D++ + +VIN+D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 805 VATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L I + FE P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
V L++ TREL QI + +F+ + I+ YGG + LK
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVM-GIRCVPVYGGSGVAQQISELKRGT- 627
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V + ++DE D+M + + + I + D+Q
Sbjct: 628 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD-MGFEPQITRIVQNIRPDRQ 686
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT--LHGLVQHYIKLQDSEKNRKLNDL 281
++FSAT +++ + +K + P+EI V + + + LV+ ++ ++ R L L
Sbjct: 687 TVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVE--VRPENERFLRLLELL 744
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + ++++FV S + L K L++ +P + +H Q +R FK +L
Sbjct: 745 GEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLL 804
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
VAT + RG+D++ + +VIN+D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 805 VATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L I + FE P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
V L++ TREL QI + +F+ + I+ YGG + LK
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVM-GIRCVPVYGGSGVAQQISELKRGT- 627
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V + ++DE D+M + + + I + D+Q
Sbjct: 628 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD-MGFEPQITRIVQNIRPDRQ 686
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT--LHGLVQHYIKLQDSEKNRKLNDL 281
++FSAT +++ + +K + P+EI V + + + LV+ ++ ++ R L L
Sbjct: 687 TVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVE--VRPENERFLRLLELL 744
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + ++++FV S + L K L++ +P + +H Q +R FK +L
Sbjct: 745 GEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLL 804
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
VAT + RG+D++ + +VIN+D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 805 VATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L I + FE P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
V L++ TREL QI + +F+ + I+ YGG + LK
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVM-GIRCVPVYGGSGVAQQISELKRGT- 627
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V + ++DE D+M + + + I + D+Q
Sbjct: 628 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD-MGFEPQITRIVQNIRPDRQ 686
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT--LHGLVQHYIKLQDSEKNRKLNDL 281
++FSAT +++ + +K + P+EI V + + + LV+ ++ ++ R L L
Sbjct: 687 TVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVE--VRPENERFLRLLELL 744
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + ++++FV S + L K L++ +P + +H Q +R FK +L
Sbjct: 745 GEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLL 804
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
VAT + RG+D++ + +VIN+D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 805 VATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L I + FE P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
V L++ TREL QI + +F+ + I+ YGG + LK
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVM-GIRCVPVYGGSGVAQQISELKRGT- 627
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V + ++DE D+M + + + I + D+Q
Sbjct: 628 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD-MGFEPQITRIVQNIRPDRQ 686
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT--LHGLVQHYIKLQDSEKNRKLNDL 281
++FSAT +++ + +K + P+EI V + + + LV+ ++ ++ R L L
Sbjct: 687 TVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVE--VRPENERFLRLLELL 744
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + ++++FV S + L K L++ +P + +H Q +R FK +L
Sbjct: 745 GEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLL 804
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
VAT + RG+D++ + +VIN+D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 805 VATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L I + FE P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
V L++ TREL QI + +F+ + I+ YGG + LK
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVM-GIRCVPVYGGSGVAQQISELKRGT- 627
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V + ++DE D+M + + + I + D+Q
Sbjct: 628 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD-MGFEPQITRIVQNIRPDRQ 686
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT--LHGLVQHYIKLQDSEKNRKLNDL 281
++FSAT +++ + +K + P+EI V + + + LV+ ++ ++ R L L
Sbjct: 687 TVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVE--VRPENERFLRLLELL 744
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + ++++FV S + L K L++ +P + +H Q +R FK +L
Sbjct: 745 GEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLL 804
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
VAT + RG+D++ + +VIN+D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 805 VATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 182/351 (51%), Gaps = 15/351 (4%)
Query: 52 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP 111
L ++L I + FE P +Q + +P + G D I AK+G GKT FVL L+ I P
Sbjct: 510 LTSKILDTIKKANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQP 569
Query: 112 GQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECP 166
V L++ TREL QI + +F+ + I+ YGG + LK
Sbjct: 570 PVVVGDGPIGLIMAPTRELVQQIHSDIRKFTKVM-GIRCVPVYGGSGVAQQISELKRGT- 627
Query: 167 HIVVGTPGR---ILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQ 223
IVV TPGR IL + K L+ V + ++DE D+M + + + I + D+Q
Sbjct: 628 EIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFD-MGFEPQITRIVQNIRPDRQ 686
Query: 224 VMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLT--LHGLVQHYIKLQDSEKNRKLNDL 281
++FSAT +++ + +K + P+EI V + + + LV+ ++ ++ R L L
Sbjct: 687 TVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVE--VRPENERFLRLLELL 744
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
+ + ++++FV S + L K L++ +P + +H Q +R FK +L
Sbjct: 745 GEWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLL 804
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
VAT + RG+D++ + +VIN+D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 805 VATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 187/370 (50%), Gaps = 22/370 (5%)
Query: 42 IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL 101
+ S F + + P L+ + D+G+E + VQ +P + G DV+ +AK+G GKT F+L
Sbjct: 102 LSDSRFDECSVSPLSLKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLL 161
Query: 102 SSLQQI------DPVPGQVAALVL--CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 153
S++ + DP Q LVL C TRELA Q E + Y P I V GG
Sbjct: 162 PSIEVVVKSPPSDPGQSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTK 221
Query: 154 I-KVHKELLKNECPHIVVGTPGRI---LALTRDKDLGLKNVRHFILDECDKMLESLDMRR 209
I K + KN C I+V TPGR+ +A T L ++ F++DE D++L+ + R+
Sbjct: 222 IVSEQKRIQKNPC-QILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLD-MGFRK 279
Query: 210 DVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPME-IYVDDEAKLTLHGLVQHYIK 268
D++EI P +Q +MFSAT+ K + VC ++ E I E H V+
Sbjct: 280 DIEEIITSVPKQRQTLMFSATIPKAVHQVCNVALKKDYEFINTVQEGTEETHSQVRQMHL 339
Query: 269 LQDSEKNRKLNDLL------DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 322
+ +K+ L ++ D +D+ +V++F + + + LL + + I+S
Sbjct: 340 IAPLDKHFSLLSVILKEHIADEVDY-KVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKK 398
Query: 323 QEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 382
Q R + F++ K+ ILV +D+ RG+D V++V+ +P + Y+HR+GR GR G
Sbjct: 399 QGFRNRVSDEFRKSKRLILVTSDVSARGVDYPDVSLVVQLGIPADKELYIHRLGRTGRIG 458
Query: 383 TKGLAITFVS 392
+G I ++
Sbjct: 459 KEGKGILLLA 468
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 190/379 (50%), Gaps = 27/379 (7%)
Query: 38 GYVGIHSSGFRDFL-----LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSG 92
G VG+ +S D + P L+ + D+G+E + VQ +P + G DV+ +AK+G
Sbjct: 89 GIVGVTASYLSDSRFDKCSVSPLSLKGVKDAGYEKMTIVQEATLPVILKGKDVLAKAKTG 148
Query: 93 MGKTAVFVLSSLQQIDPVP----GQ----VAALVLCHTRELAYQICHEFERFSTYLPDIK 144
GKT F+L S++ + P GQ + LV+C TRELA Q E + Y P I
Sbjct: 149 TGKTVAFLLPSIEVVVKSPPNNRGQNQTPILVLVVCPTRELACQAAAEATKLLKYHPTIG 208
Query: 145 VAVFYGGVNIKV-HKELLKNECPHIVVGTPGRI---LALTRDKDLGLKNVRHFILDECDK 200
V GG ++ K + KN C I++ TPGR+ +A T L V+ +LDE D+
Sbjct: 209 AQVVIGGTSLSSEQKRIQKNPC-QILIATPGRLKDHIANTAGFASKLMGVKALVLDEADQ 267
Query: 201 MLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPME-IYVDDEAKLTL 259
+L+ + R+D+++I P +Q +MFSAT+ + VC ++ E I E
Sbjct: 268 LLD-MGFRKDIEKIIASVPKQRQTLMFSATIPDAVHQVCNVALKKDFEFINTVQEGTEET 326
Query: 260 HGLVQHYIKLQDSEKNRKLNDLL------DALDFNQVVIFVKSVSRAAELNKLLVECNFP 313
H V+ + +K+ L ++ D +D+ +V++F + + + LL + N
Sbjct: 327 HSQVRQMHLIAPLDKHFSLLSVILKEHIADDVDY-KVLVFCTTAMVTSLVANLLGKLNLN 385
Query: 314 SICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 373
IHS +Q R + F++ K+ ILV +D+ RG+D V++V+ +P Y+H
Sbjct: 386 VREIHSRKNQSYRTRVSDEFRKSKRLILVTSDVSARGVDYPDVSLVVQVGLPADKQQYIH 445
Query: 374 RVGRAGRFGTKGLAITFVS 392
R+GR GR G +G I ++
Sbjct: 446 RLGRTGRKGKEGKGILLLA 464
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 189/355 (53%), Gaps = 13/355 (3%)
Query: 46 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ 105
GF L ++ I G++ P+ +Q + +P + G+DV+ A++G GKTA F++ L
Sbjct: 19 GFETLGLNRDVFSGIKRKGYKVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLVPMLH 78
Query: 106 QIDP-VP-GQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVH-KELLK 162
+++ VP G V L+L TR+LA Q +F + + D++V++ GG +++ +EL +
Sbjct: 79 RLNQHVPQGGVRGLILSPTRDLAQQTL-KFTKELGHFTDLRVSLLVGGDSMESQFEELAQ 137
Query: 163 NECPHIVVGTPGRILA-LTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHD 221
N P I++ TPGR++ L+ D+ L+ V + + DE D L + + +I +
Sbjct: 138 N--PDIIIATPGRLMHHLSEVDDMSLRKVEYVVFDEAD-CLFGMGFAEQLHQILAQLGEN 194
Query: 222 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDL 281
+Q ++FSATL + K ++DP + +D E K++ L + L+ EK L L
Sbjct: 195 RQTLLFSATLPSALAEFAKAGLRDPRLVRLDLETKISPD-LKLVFFTLRQEEKYAALLYL 253
Query: 282 LDAL--DFNQVVIFVKSVSRAAELNKLL-VECNFPSICIHSGMSQEERLKRYKGFKEGKQ 338
+ L Q +IFV + LN L +E PS+C + M Q+ R + F+ K
Sbjct: 254 IRELIGSDEQTLIFVSTKHHVEFLNSLFQLEGIRPSVC-YGDMDQDARKEHVARFRSRKT 312
Query: 339 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 393
+L+ TD+ RGIDI ++ VIN+D P ++HRVGR R G G A +F+++
Sbjct: 313 MLLIVTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAYSFLTA 367
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 186/386 (48%), Gaps = 24/386 (6%)
Query: 26 DSAKPAAETAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDV 85
++ +PA+ Y + S F + P L+ I D+G+E + VQ +P + G DV
Sbjct: 183 NTTRPASSGGSDSY--LSDSRFDQCSVSPLSLKGIKDAGYEKMTVVQEATLPVILKGKDV 240
Query: 86 ICQAKSGMGKTAVFVLSSLQQIDPVPGQ--------VAALVLCHTRELAYQICHEFERFS 137
+ +AK+G GKT F+L S++ + P + LV+C TRELA Q E +
Sbjct: 241 LAKAKTGTGKTVAFLLPSIEVVVKSPPSDRDQRRPPIFVLVICPTRELACQAAAEATKLL 300
Query: 138 TYLPDIKVAVFYGGVNIKV-HKELLKNECPHIVVGTPGRI---LALTRDKDLGLKNVRHF 193
Y P I V V GG + + K + N C I+V TPGR+ + T L V+
Sbjct: 301 KYHPTIGVQVVIGGTRLALEQKRMQANPC-QILVATPGRLRDHIENTAGFASRLMGVKSL 359
Query: 194 ILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPME-IYVD 252
+LDE D +L+ + R+D+++I P +Q +MFSAT+ E+R VC ++ E I
Sbjct: 360 VLDEADHLLD-MGFRKDIEKIIAAIPKQRQTLMFSATIPDEVRQVCHVALKRDFEYINTV 418
Query: 253 DEAKLTLHGLVQHYIKLQDSEKNRKL------NDLLDALDFNQVVIFVKSVSRAAELNKL 306
E H V+ + +K+ L + D +D+ +V++F + + L
Sbjct: 419 QEGSEDTHSQVRQMHLVAPLDKHFPLLYAILKEHIADDVDY-KVLVFCTTAMVTRLVADL 477
Query: 307 LVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPD 366
L E N IHS Q R + F++ K ILV +D+ RG+D V +V+ +P
Sbjct: 478 LGELNLNVREIHSRKPQSYRTRVSDEFRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPA 537
Query: 367 SADTYLHRVGRAGRFGTKGLAITFVS 392
Y+HR+GR GR G +G I ++
Sbjct: 538 DKQQYIHRLGRTGRKGKEGQGILLLA 563
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 190/387 (49%), Gaps = 31/387 (8%)
Query: 41 GIHSSGFRDFLLKPEL----LRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKT 96
+ S+ F D LKP L L+A+ DS F+ + VQ IP DV A +G GKT
Sbjct: 9 ALTSTRFSD--LKPPLSEPVLQALTDSNFDFCTPVQAATIPLLCSYKDVAVDAATGSGKT 66
Query: 97 AVFVLSSLQQI-----DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGG 151
FV+ ++ + +P P QV +++ TRELA QI H + F + L ++K + GG
Sbjct: 67 LAFVIPLVEILRRNASNPKPHQVLGVIISPTRELASQIYHVAQPFISTLANVKSMLLVGG 126
Query: 152 VNIKVHKELLKNECPHIVVGTPGRILALTRDKD-LGLKNVRHFILDECDKMLESLDMRRD 210
V +K + ++ E ++++GTPGR+ + D L K+ ILDE D++L+ + ++
Sbjct: 127 VEVKADIKKIEEEGANVLIGTPGRLHDIMNRMDILDFKSFEILILDEADRLLD-MGFQKQ 185
Query: 211 VQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL------------- 257
+ I P ++ +FSAT ++ + + K +++P+ + V E K
Sbjct: 186 INAIITELPKLRRTGLFSATQTQAVEELAKAGLRNPVRVEVRAETKTANDSASSKKIESS 245
Query: 258 -TLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVS----RAAELNKLLVECNF 312
T GL Y++ + +K +L D L +++I+ + + L +L V F
Sbjct: 246 KTPSGLQIEYLECEADKKPSQLVDFLVKNRSKKIIIYFMTCACVDYWGLVLPRLSVLKGF 305
Query: 313 PSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 372
I +H M Q R K F IL+ TD+ RG+DI V+ ++ YD P + ++
Sbjct: 306 SLISLHGKMKQSVREKALTSFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFV 365
Query: 373 HRVGRAGRFGTKGLAITFVSSSGDSEV 399
HRVGR R G +G A+ F+ +S V
Sbjct: 366 HRVGRTARLGKQGHAVVFLLPKEESYV 392
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 174/342 (50%), Gaps = 13/342 (3%)
Query: 56 LLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDP-VPGQV 114
LL + + GF P+ +Q + IP + + A +G GKT FV L ++ G V
Sbjct: 144 LLWKLAELGFREPTPIQRQAIPVLLQDRECFACAPTGSGKTLAFVCPMLMKLKAHAKGGV 203
Query: 115 AALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPG 174
A+++CH+REL+ Q E ++ + K + N+ + + K C I++ TP
Sbjct: 204 RAVIICHSRELSGQTYRECKKLAK---GEKFRIKLMTKNLLRNADFSKFSC-DILISTPL 259
Query: 175 RILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVM-MFSATLSK 233
R+ + K + L V + +LDE DK+ E + + + I K + + +FSATL
Sbjct: 260 RLCLAIKKKKVDLSRVEYLVLDESDKLFEP-QLFKQIDSIIKACTNPSIIRSLFSATLPD 318
Query: 234 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKL---NDLLDALDFNQV 290
+ ++ M D + + V K ++ + SE+ + L ++L+ V
Sbjct: 319 FVEDRARELMHDAVRVIVG--RKNMASDTIKQKLVFTGSEEGKLLAIRQSFAESLN-PPV 375
Query: 291 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRG 350
++F++S RA EL L N IHS +SQEER F+ GK +L+ATD+V RG
Sbjct: 376 LVFLQSKERAKELYGELAFDNIRVDVIHSDLSQEERENAVDNFRAGKTWVLIATDVVARG 435
Query: 351 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+D + +N VINYD PDSA Y+HR+GR+GR G G AITF +
Sbjct: 436 MDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYT 477
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 193/374 (51%), Gaps = 31/374 (8%)
Query: 37 KGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKT 96
KG V F L +LL+ I +G+E P+ VQ + IP A++G +++ A +G GK+
Sbjct: 131 KGVVSAPVMSFASCNLPDKLLQNIEAAGYEMPTPVQMQAIPAALVGKNMLVLADTGSGKS 190
Query: 97 AVFVLSSLQQIDPVPGQVA--------------ALVLCHTRELAYQICHEFERFSTYLPD 142
A F++ P+ + A A+VL TREL+ Q+ + LP
Sbjct: 191 ASFLI-------PIISRCASHRLMYVSDNKKPLAMVLTPTRELSIQVEEHAKLLGKGLP- 242
Query: 143 IKVAVFYGGVNIKVHKELLK-NECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKM 201
K A+ GG + ++L + + ++VGTPGR++ L ++ L +V F++DE D M
Sbjct: 243 FKTALVVGG--DAMARQLYRIQQGVELIVGTPGRLVDLLTKNEIDLDDVTTFVVDEVDCM 300
Query: 202 LESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHG 261
L+ R V +IF QV+M+SAT S + + +D + I V + +
Sbjct: 301 LQR-GFRDQVLQIFTALSQ-PQVLMYSATTSDSLEKMANSMAKDTVVITVGEPNRPN-KA 357
Query: 262 LVQHYIKLQDSEKNRKLNDLLDALDFNQ--VVIFVKSVSRAAEL-NKLLVECNFPSICIH 318
+ Q I ++ +K +KL D+L + + VVI+V S A L N + V ++ IH
Sbjct: 358 VKQLAIWVESKQKKQKLFDILKSQKHFKPPVVIYVGSRLGADLLANAITVSTGVKAVSIH 417
Query: 319 SGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRA 378
S ER + + F G+ ++VAT ++GRG+D+ V VI +DMP+S + Y+H++GRA
Sbjct: 418 GEKSMTERREIMQSFMVGEFPVVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIGRA 477
Query: 379 GRFGTKGLAITFVS 392
R G +G AI FV+
Sbjct: 478 SRMGEEGQAIVFVN 491
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 192/387 (49%), Gaps = 29/387 (7%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F + + P ++A+ SG+ H + VQ +P + G DV+ +AK+G GKTA F+L +++
Sbjct: 289 FDECAISPLTIKALSTSGYTHMTRVQETSLPICLEGNDVMVKAKTGTGKTAAFLLPAIET 348
Query: 107 IDPVPGQ--------VAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHK 158
+ + L+LC TRELA QI E + Y + V GGV KV +
Sbjct: 349 VLKAMSSKTSHRAPPIYVLILCPTRELASQIAAEAKVLLKYHDGVGVQTLVGGVRFKVDQ 408
Query: 159 ELLKNECPHIVVGTPGRILALTRDK---DLGLKNVRHFILDECDKMLESLDMRRDVQEIF 215
+ L+++ ++V TPGR+L +K + + ++ ILDE D +L+ L R+D+++I
Sbjct: 409 KRLESDPCQMLVATPGRLLDHIENKTGISVRVMGLQMLILDEADHLLD-LGFRKDIEKIV 467
Query: 216 KLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQ----HYIKLQD 271
P +Q ++FSAT+ KE+R V + ++ + YVD + VQ + I +
Sbjct: 468 DCLPRQRQSLLFSATIPKEVRRVSQLVLKREHK-YVDTVGMGCVETPVQVKQSYLIAPHE 526
Query: 272 SE---KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLK 328
S + L + + +V++F + + LL + IHS Q R +
Sbjct: 527 SHFQIVHHILKEHISQTPDYKVIVFCITGMVTSLTYHLLRDMKLNVREIHSRKPQLYRTR 586
Query: 329 RYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAI 388
FKE KQ ILV++D+ RG++ V +VI +P + Y+HR+GR GR G +G I
Sbjct: 587 VSDEFKESKQMILVSSDVTSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKEGKGI 646
Query: 389 TFVSSSGDSEVLNQVQSRFEVDIKELP 415
++ + F +IK+LP
Sbjct: 647 LLIAP---------WEEYFLNEIKDLP 664
>Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46109502-46117199 | 20130731
Length = 583
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 182/348 (52%), Gaps = 21/348 (6%)
Query: 58 RAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVP----GQ 113
+AIVD GF+H +++Q IP + G DV+ A++G GKT F++ +++ + +
Sbjct: 109 KAIVDMGFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKLKFNQRSG 168
Query: 114 VAALVLCHTRELAYQICHEFER--FSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVG 171
+++C TRELA Q HE + + + + GG + E L +IVV
Sbjct: 169 TGVVIICPTRELAIQ-THEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGI-NIVVA 226
Query: 172 TPGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSAT 230
TPGR+L L K N++ I+DE D++LE+ + ++++I KL P ++Q +FSAT
Sbjct: 227 TPGRLLDHLQNTKRFIYNNLKCLIIDEADRILEA-NFEDELKQIIKLLPKNRQTALFSAT 285
Query: 231 LSKEIRPVCK-KFMQDPMEIYVDD-EAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFN 288
+K++ + + F P+ I VDD K+T GL+Q Y+ + +++ L L
Sbjct: 286 QTKKVEDLARLSFQTTPIYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLKRHKSK 345
Query: 289 QVVIFVKSVS----RAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVAT 344
+V++F S + A N + + C+ I+ Q+ R + F + ++ IL+ T
Sbjct: 346 KVMVFFSSCNSVKFHADIFNHIHLHCS----SIYGKQKQQTRTTTFVDFCQAEKGILLCT 401
Query: 345 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF-GTKGLAITFV 391
D+ RG+DI V+ ++ YD PD Y+HRVGR R KG A+ F+
Sbjct: 402 DVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGKGNALLFL 449
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 174/352 (49%), Gaps = 37/352 (10%)
Query: 64 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI-------------DPV 110
GFE PS +Q P + G D+I A +G GKT F + ++ + +P+
Sbjct: 120 GFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAIMHVMNKRKSKGSSKGRNPL 179
Query: 111 PGQVAALVLCHTRELAYQICHEFERFSTYLPD------IKVAVFYGGVNIKVHKELLKNE 164
L+L TRELA QI S L D ++ YGG LK+
Sbjct: 180 -----CLMLSPTRELAQQI-------SDVLCDAGKSCGVESVCLYGGTPKGAQISALKSG 227
Query: 165 CPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQV 224
IV+GTPGRI L L+ V +LDE D+ML+ + + V+ I T +Q+
Sbjct: 228 I-DIVIGTPGRIQDLVEMGICRLQEVSFVVLDEADRMLD-MGFEQIVRSILGQTCSARQM 285
Query: 225 MMFSATLSKEIRPVCKKFMQ-DPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLD 283
+MFSAT + + ++FM +P+++ V E H ++Q L + ++++L LL+
Sbjct: 286 VMFSATWPLAVHHLAQEFMDPNPVKVVVGSEDLSANHDVMQIVEVLDERLRDKRLLALLE 345
Query: 284 AL---DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRI 340
N+V++FV + K+L + + ++ I SQ ER K FK G +
Sbjct: 346 KYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISGDKSQHERTKALSLFKNGSCPL 405
Query: 341 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
++ATD+ RG+DI V +VIN+ P + + Y+HR+GR GR G KG+A TF +
Sbjct: 406 MIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTFFT 457
>Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:23956977-23948909 | 20130731
Length = 557
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 176/360 (48%), Gaps = 14/360 (3%)
Query: 42 IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL 101
+ + F L +AI F H +++Q + IP ++G DV+ A++G GKT F++
Sbjct: 87 LSTESFSSLGLSERTSQAIAAMSFTHMTQIQAKSIPPLLMGKDVLGAARTGSGKTLAFLI 146
Query: 102 SSLQ-----QIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKV 156
+++ Q P G +V+C TRELA Q + GGV K
Sbjct: 147 PAVELLYNVQFTPRNG-TGVIVICPTRELAIQTHAVASELMKGYHSQTLGKVIGGVGRKG 205
Query: 157 HKELLKNECPHIVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIF 215
E + ++++ TPGR+L L K KN++ ++DE D++LES + ++++I
Sbjct: 206 EAERIVKGV-NLLIATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILES-NFEEEMKQIL 263
Query: 216 KLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD---DEAKLTLHGLVQHYIKLQDS 272
+ P +Q +FSAT +K++ + + Q P +YVD K+T+ GL Q Y+ + +
Sbjct: 264 NILPKKRQTALFSATQTKKVEDLARLSFQTP-PVYVDVDIGREKVTVEGLEQGYVVVPCA 322
Query: 273 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKG 332
++ L L +V++F S + LL + IH Q R +
Sbjct: 323 KRFVVLYSFLKRYQSKKVMVFFSSCNSVKFHADLLKFIGLDCLNIHGKQKQNSRTSTFFN 382
Query: 333 FKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF-GTKGLAITFV 391
F + ++ IL+ TD+ RG+DI V+ ++ +D PD Y+HRVGR R G KG A+ F+
Sbjct: 383 FCKAEKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFL 442
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 206/453 (45%), Gaps = 78/453 (17%)
Query: 46 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAI-LGMDVICQAKSGMGKTAVFVLSSL 104
+ + L P L++AI GF+ P+ +Q C+P A G DVI A++G GKT F L L
Sbjct: 163 AWNELRLHPRLMKAIHKLGFKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPIL 222
Query: 105 QQ----------IDPVPGQVAA-----------LVLCHTRELAYQICHEFERFSTYLPDI 143
Q+ I V G+ AA L++ TRELA Q+ + + ++ ++
Sbjct: 223 QRLLEEREKAESISGVNGEEAAEKYATTGLLRSLIIAPTRELALQVAKHLKAVAKHI-NV 281
Query: 144 KVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKD---LGLKNVRHFILDECDK 200
+V GG+ + + LLK P IVV TPGR+ L + + L ++ F+LDE D+
Sbjct: 282 RVTAIVGGILPEKQERLLKAR-PEIVVATPGRLWELMSSGEKHLIELHSLSFFVLDEADR 340
Query: 201 MLES---------LDM-----------RRDVQE---IFKLTPHDKQVMMFSAT--LSKEI 235
M++S +DM +D Q + + +Q ++FSAT LS +
Sbjct: 341 MVQSGHFKELQSIIDMLPMSNISSEDNSKDAQNCVTVSSIQKKKRQTLVFSATVALSADF 400
Query: 236 RPVCKKFMQDPMEIYVD---------DEAKLTLHGLV--------------QHYIKLQDS 272
R K+ ++ D + A + + + + +I+ +
Sbjct: 401 RKKLKRGSIQKKQLSTDGLDSIETLSERAGMRPNAAIIDLTNPSILAAKIEESFIECTED 460
Query: 273 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKG 332
+K+ L +L + ++F S++ ++ +L +H+ M Q RLK
Sbjct: 461 DKDAHLYYILTVHGQGRTIVFCTSIAALRHISSILRILGVNVWTLHAQMQQRARLKAMDR 520
Query: 333 FKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
F+E ILVATD+ RG+DI V V++Y +P SA+ Y+HR GR R +G +I +S
Sbjct: 521 FRENDNGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALIS 580
Query: 393 SSGDSEVLNQVQSRFEVDIKELPEQIDTATYMP 425
S+ + +S + + + P + +YMP
Sbjct: 581 PKETSKFASLCKSFSKDNFQRFPVE---NSYMP 610
>Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6241938-6240697 | 20130731
Length = 325
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 163/341 (47%), Gaps = 27/341 (7%)
Query: 76 IPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAYQICHEFER 135
IP G DVI Q SG G +A F + L+ +D ALVL T ELA QI +
Sbjct: 3 IPPFCKGHDVILQDPSGTGMSATFCIGILKMLDYELAHCQALVLAPTNELALQIKQVMQD 62
Query: 136 FSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFIL 195
+ +++ GG++ V + ++V ++
Sbjct: 63 LGQF-HGVRIHACVGGISAPVEDLQRFMQVFTLLV-----------------------VM 98
Query: 196 DECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEA 255
DE D+ML S D + +IF+L P+ QV + S+T+ E + +KFM+ P+ I +
Sbjct: 99 DEVDEML-SCDFEEKIDKIFQLLPYKIQVGVISSTMPPEALEITRKFMKKPVTIQAKRDE 157
Query: 256 KLTLHGLVQHYIKL-QDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPS 314
TL G+ Q Y+ + ++ K L D+ ++FV + + L + +
Sbjct: 158 LTTLEGIKQFYVNVDEEKWKLETLYDIYTTKFITHCIVFVNTERKVDWLMDKMRSRYYTV 217
Query: 315 ICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHR 374
+ IH M Q R + F+ G +IL+ TD + G+D++ V++VINYD+P + YLHR
Sbjct: 218 LTIHDDMDQNTRDIIVRNFQSGSPQILITTDPLVYGLDVQEVSLVINYDLPTLPENYLHR 277
Query: 375 VGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKELP 415
+ GRFG KG+AI FV+ D +L+ +Q V I+ELP
Sbjct: 278 ICHKGRFGRKGVAINFVTLD-DFRMLSDIQKLSNVIIEELP 317
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 187/427 (43%), Gaps = 63/427 (14%)
Query: 44 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSS 103
+ F + + L+ + GF P++VQ +P + DVI Q+ +G GKT ++L
Sbjct: 107 AKSFSELGIPEVLIERLGKEGFNVPTDVQSAAVPTILKNRDVIIQSYTGSGKTLAYLLPI 166
Query: 104 LQQIDPVPGQ----------------VAALVLCHTRELAYQICHEFERFSTYLPDIKVAV 147
L I P+ G+ V A+++ +REL QI EFE+ V
Sbjct: 167 LSVIGPLKGENNEGGGDGGESGKKLGVEAVIVAPSRELGMQIVREFEKILGMENRKVVQQ 226
Query: 148 FYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDM 207
GG N +E LK P IVVGTPGRI L+ L ++ +LDE D++L S +
Sbjct: 227 LVGGANRTRQEEALKKNKPAIVVGTPGRIAELSASGKLRAHGCQYLVLDEVDELL-SFNF 285
Query: 208 RRDVQEIF-------------KLTPHDKQVMMFSATLSKEIRPVCKKFMQDPM------- 247
R D+ + K ++Q++M SAT+ + K + DP+
Sbjct: 286 REDMHRLLEHVGRRSGADHNSKAKKTERQLIMVSATVPFSVVRAAKSWGSDPLLVQAKKI 345
Query: 248 ---EIYVDDEAKL-----------------TLHGLVQHY---IKLQDSEKNRKLNDLLDA 284
E + KL +L ++HY ++LQ K L + A
Sbjct: 346 VPLETLSPEPVKLSPSSSSTPSVPSKAVVESLPPALKHYYCVVRLQ--HKVDTLRRCIHA 403
Query: 285 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVAT 344
LD V++F+ + ++ L + +H + + R K FK G+ R+LV
Sbjct: 404 LDAKFVIVFMNHTKQLKDVVFKLEARGVKAAELHGDLGKLGRSTTLKKFKNGEVRVLVTN 463
Query: 345 DLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQ 404
+L RG+D+ ++V+N D+P + Y HR GR GR G G +T S + V+ +++
Sbjct: 464 ELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTICEES-EVFVVRKLK 522
Query: 405 SRFEVDI 411
+ E+ I
Sbjct: 523 KQLEIPI 529
>Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40427970-40421694 | 20130731
Length = 747
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 182/349 (52%), Gaps = 28/349 (8%)
Query: 63 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID----PVPGQVAALV 118
S F +++Q +P A+ G DV+ AK+G GKT F++ L+++ V +++
Sbjct: 93 SKFVSMTKIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLHRERWGTEDGVGSII 152
Query: 119 LCHTRELAYQI------CHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGT 172
+ TRELA QI E RFS L + GG ++ + KE + +I++ T
Sbjct: 153 ISPTRELAGQIFGVLNAIGEHHRFSAGL------LIGGGGDVAIEKECVNKL--NILICT 204
Query: 173 PGRILA-LTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATL 231
PGR+L + + ++ +LDE D++L+S +++V I P +Q M+FSAT
Sbjct: 205 PGRLLQHMDETPNFDCSQMQVLVLDEADRILDS-GFKKEVNAIISQLPKRRQTMLFSATQ 263
Query: 232 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDF---N 288
+K ++ + + ++DP I V +E+ L++ + + ++KL+ L + +
Sbjct: 264 TKSVQDLARLSLKDPEYISVHEESVTATPTLLKQTVMI--VPLDQKLDMLWTFIKRHLQS 321
Query: 289 QVVIFVKSVSRAAELNKLL--VECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDL 346
+ ++F+ S + + ++ + P C+H M QE+R+ Y F E K+ +L +TD+
Sbjct: 322 KTLVFLSSCKQVKFVFEVFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDV 381
Query: 347 VGRGIDIER-VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
RG+D + V+ V+ D P++ +Y+HRVGR R+ + G ++ F+ S
Sbjct: 382 AARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYNSVGKSVLFLLPS 430
>Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10126329 | 20130731
Length = 458
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 169/338 (50%), Gaps = 22/338 (6%)
Query: 42 IHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVL 101
+ S F + + P L+ + D+G+E + VQ +P + G DV+ +AK+G GKT F+L
Sbjct: 102 LSDSRFDECSVSPLSLKGVKDAGYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLL 161
Query: 102 SSLQQI------DPVPGQVAALVL--CHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN 153
S++ + DP Q LVL C TRELA Q E + Y P I V GG
Sbjct: 162 PSIEVVVKSPPSDPGQSQTPILVLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTK 221
Query: 154 I-KVHKELLKNECPHIVVGTPGRI---LALTRDKDLGLKNVRHFILDECDKMLESLDMRR 209
I K + KN C I+V TPGR+ +A T L ++ F++DE D++L+ + R+
Sbjct: 222 IVSEQKRIQKNPC-QILVATPGRLKDHIAKTAGFASNLMGLKTFVIDEADRLLD-MGFRK 279
Query: 210 DVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPME-IYVDDEAKLTLHGLVQHYIK 268
D++EI P +Q +MFSAT+ K + VC ++ E I E H V+
Sbjct: 280 DIEEIITSVPKQRQTLMFSATIPKAVHQVCNVALKKDYEFINTVQEGTEETHSQVRQMHL 339
Query: 269 LQDSEKNRKLNDLL------DALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 322
+ +K+ L ++ D +D+ +V++F + + + LL + + I+S
Sbjct: 340 IAPLDKHFSLLSVILKEHIADEVDY-KVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKK 398
Query: 323 QEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVI 360
Q R + F++ K+ ILV +D+ RG+D V++V+
Sbjct: 399 QGFRNRVSDEFRKSKRLILVTSDVSARGVDYPDVSLVV 436
>Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 156/317 (49%), Gaps = 14/317 (4%)
Query: 41 GIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFV 100
H + F D+ L I GF P+ +Q + P A+ G D+I A++G GKT ++
Sbjct: 202 AFHEANFPDYCLD-----VIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYL 256
Query: 101 LSSLQQIDPVPGQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 155
L ++ + P V LVL TRELA QI E +F + +I+ YGG
Sbjct: 257 LPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRS-NIRCTCIYGGAPKG 315
Query: 156 VHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIF 215
L+ IV+ TPGR++ + + L+ V + +LDE D+ML+ + +++I
Sbjct: 316 PQIRDLRMGV-EIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLD-MGFEPQIRKIV 373
Query: 216 KLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEK- 274
D+Q + +SAT KE+ + ++F+ +P ++ + + Q + D EK
Sbjct: 374 NQIRPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYLKANQSINQVVEVVTDMEKY 433
Query: 275 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFK 334
NR + L + +D ++++IF ++ ++ + L +P++ IH +Q ER FK
Sbjct: 434 NRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFK 493
Query: 335 EGKQRILVATDLVGRGI 351
G+ I+ ATD+ RG+
Sbjct: 494 SGRSPIMTATDVAARGL 510
>Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 156/317 (49%), Gaps = 14/317 (4%)
Query: 41 GIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFV 100
H + F D+ L I GF P+ +Q + P A+ G D+I A++G GKT ++
Sbjct: 202 AFHEANFPDYCLD-----VIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYL 256
Query: 101 LSSLQQIDPVPGQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 155
L ++ + P V LVL TRELA QI E +F + +I+ YGG
Sbjct: 257 LPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRS-NIRCTCIYGGAPKG 315
Query: 156 VHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIF 215
L+ IV+ TPGR++ + + L+ V + +LDE D+ML+ + +++I
Sbjct: 316 PQIRDLRMGV-EIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLD-MGFEPQIRKIV 373
Query: 216 KLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEK- 274
D+Q + +SAT KE+ + ++F+ +P ++ + + Q + D EK
Sbjct: 374 NQIRPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYLKANQSINQVVEVVTDMEKY 433
Query: 275 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFK 334
NR + L + +D ++++IF ++ ++ + L +P++ IH +Q ER FK
Sbjct: 434 NRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFK 493
Query: 335 EGKQRILVATDLVGRGI 351
G+ I+ ATD+ RG+
Sbjct: 494 SGRSPIMTATDVAARGL 510
>Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 156/317 (49%), Gaps = 14/317 (4%)
Query: 41 GIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFV 100
H + F D+ L I GF P+ +Q + P A+ G D+I A++G GKT ++
Sbjct: 202 AFHEANFPDYCLD-----VIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYL 256
Query: 101 LSSLQQIDPVPGQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 155
L ++ + P V LVL TRELA QI E +F + +I+ YGG
Sbjct: 257 LPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRS-NIRCTCIYGGAPKG 315
Query: 156 VHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIF 215
L+ IV+ TPGR++ + + L+ V + +LDE D+ML+ + +++I
Sbjct: 316 PQIRDLRMGV-EIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLD-MGFEPQIRKIV 373
Query: 216 KLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEK- 274
D+Q + +SAT KE+ + ++F+ +P ++ + + Q + D EK
Sbjct: 374 NQIRPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYLKANQSINQVVEVVTDMEKY 433
Query: 275 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFK 334
NR + L + +D ++++IF ++ ++ + L +P++ IH +Q ER FK
Sbjct: 434 NRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFK 493
Query: 335 EGKQRILVATDLVGRGI 351
G+ I+ ATD+ RG+
Sbjct: 494 SGRSPIMTATDVAARGL 510
>Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 156/317 (49%), Gaps = 14/317 (4%)
Query: 41 GIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFV 100
H + F D+ L I GF P+ +Q + P A+ G D+I A++G GKT ++
Sbjct: 202 AFHEANFPDYCLD-----VIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYL 256
Query: 101 LSSLQQIDPVPGQVAA-----LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK 155
L ++ + P V LVL TRELA QI E +F + +I+ YGG
Sbjct: 257 LPAIVHVSAQPRLVQGEGPVVLVLAPTRELAVQIQQEAMKFGSRS-NIRCTCIYGGAPKG 315
Query: 156 VHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIF 215
L+ IV+ TPGR++ + + L+ V + +LDE D+ML+ + +++I
Sbjct: 316 PQIRDLRMGV-EIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLD-MGFEPQIRKIV 373
Query: 216 KLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEK- 274
D+Q + +SAT KE+ + ++F+ +P ++ + + Q + D EK
Sbjct: 374 NQIRPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYLKANQSINQVVEVVTDMEKY 433
Query: 275 NRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFK 334
NR + L + +D ++++IF ++ ++ + L +P++ IH +Q ER FK
Sbjct: 434 NRLIKLLKEVMDGSRILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFK 493
Query: 335 EGKQRILVATDLVGRGI 351
G+ I+ ATD+ RG+
Sbjct: 494 SGRSPIMTATDVAARGL 510
>Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:17543999-17545772 | 20130731
Length = 398
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 183/392 (46%), Gaps = 41/392 (10%)
Query: 64 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTR 123
GF PS +Q I G+ VI Q G G F + L+++D ALVL T
Sbjct: 9 GFGRPSSIQQRVIAPFCEGLGVILQDPYGTGMLETFCIGILKKLDYGLVHCQALVLAPTM 68
Query: 124 ELAYQICHEFERFSTYLPDIKVAVFYGGVN----------------------------IK 155
EL QI + + +K+ GG + I
Sbjct: 69 ELVLQIKEVMQDLGRF-HGVKIHACVGGTSVPKEDRQRFLKVGYNSYIVEGTSNVYDIID 127
Query: 156 VHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIF 215
+ + + HI+VGTP + + + L ++ F++DE D+ML SL + + EIF
Sbjct: 128 MDGQFIFKGGVHIIVGTPRCVYDMLQRGRTRLDCIKMFVMDEVDQML-SLGFKDKIDEIF 186
Query: 216 KLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSE-K 274
KL P QV + SAT+ E + +KFM+ P+ I + +LTL G+ Q Y+ ++ E K
Sbjct: 187 KLLPCKIQVGVISATMPPEALEITRKFMKKPVTIQAKPD-ELTLEGIKQFYVDVEKEEWK 245
Query: 275 NRKLNDLLD----ALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRY 330
L D+ + A ++FV + + L + + I S M Q R
Sbjct: 246 LETLCDIFELTVKAKSITHCIVFVDTRCKVDWLTDKMQSRDHKVSVIQSDMDQNTRDIIV 305
Query: 331 KGF--KEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG-RAGRFGTKGLA 387
+ F + G +L+ TD + G D+ +V++++NYD+P + + YL+R+G R+G+FG + +A
Sbjct: 306 REFFSQSGSPHVLITTDPLVCGTDVHKVSLIVNYDLPAAPENYLYRIGRRSGQFG-RCVA 364
Query: 388 ITFVSSSGDSEVLNQVQSRFEVDIKELPEQID 419
I F++ + +++ +Q + + I+ELP D
Sbjct: 365 INFMTKDEATMIID-IQKFYNMVIEELPYNFD 395
>Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:21899223-21892509 | 20130731
Length = 613
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 182/415 (43%), Gaps = 93/415 (22%)
Query: 64 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVA------AL 117
GFE P+ +Q + IP + G + A +G GKT ++ + + +V AL
Sbjct: 63 GFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRVQRSDGTFAL 122
Query: 118 VLCHTRELAYQICHE-----FERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGT 172
VL TREL Q+ HE RF +P GG + K L+ I++ T
Sbjct: 123 VLVPTRELCLQV-HEILQKLLHRFHWIVP----GYIMGGESRSKEKARLRKGIS-ILIAT 176
Query: 173 PGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKL-----TPHD----- 221
PGR+L L N+R I DE D++LE L +++QEI L T HD
Sbjct: 177 PGRLLDHLKNTSSFVYTNLRWIIFDEADRILE-LGFGKEIQEILNLLGSMKTGHDDQESG 235
Query: 222 --------KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDE------------------- 254
+Q ++ SATL++++ + K ++DP+ I +DD+
Sbjct: 236 VPRPSKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKIMEPTSRIRFDNSDCDEDN 295
Query: 255 -----AKLTLHG-------LVQHYIKL-------------------QDSEKNRKLNDLLD 283
+K+ G L+Q Y+K+ + S+K D
Sbjct: 296 EDTHSSKIPAIGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFEREPSQKVVLFFSTCD 355
Query: 284 ALDFNQVVI---FVKSVSRAAELNK-LLVECNFPSICIHSGMSQEERLKRYKGFKEGKQR 339
A+DF+ +I S + E N+ + + C ++ +H M QE+R ++ FK K
Sbjct: 356 AVDFHYSLITEFLFSSYPQTEEGNRTMFLGCK--TLRLHGNMEQEDRTTSFQAFKTEKSA 413
Query: 340 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
+L++TD+ RG+D V +I YD P A Y+HRVGR R G +G ++ F+ S
Sbjct: 414 LLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLLFLQPS 468
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 161/322 (50%), Gaps = 22/322 (6%)
Query: 82 GMDVICQAKSGMGKTAVFVLSSLQQIDPVP---------GQV-AALVLCHTRELAYQICH 131
G D++ +A++G GKT FVL L+ + P G+V + +VL TRELA Q+
Sbjct: 139 GSDLVGRARTGQGKTLAFVLPILESLTNGPAKSVRKTGYGRVPSVIVLLPTRELANQVYA 198
Query: 132 EFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVR 191
+FE + + L + YGG + L+ IV+GTPGRI ++ L +++
Sbjct: 199 DFELYGSSL-GLSACAVYGGAPYGAQETKLRRGV-DIVIGTPGRIKDHIERGNIDLSHLK 256
Query: 192 HFILDECDKMLESLDMRRDVQEIF-KLTPHDK-QVMMFSATLSKEIRPVCKKFMQ-DPME 248
+LDE D+ML + DV+ I K+ K Q ++FSATL ++ + KF++ D
Sbjct: 257 FRVLDEADEMLR-MGFVDDVELILGKVQDVTKVQTLLFSATLPSWVKQISTKFLKSDKKT 315
Query: 249 IYVDDEAKLTLHGLVQHYI-KLQDSEKNRKLNDLLDALDFN-QVVIFVKSVSRAAELNKL 306
+ K+ V+H I + + + + D++ + +IF + A+EL L
Sbjct: 316 ADLVGNEKMKASTNVRHIILPCSSTARAQLIPDIIRCYSSGGRTIIFAEKKESASELAGL 375
Query: 307 LVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPD 366
L +H + Q +R KGF+ GK LVAT++ RG+DI V ++I + P
Sbjct: 376 LPGAR----ALHGDIQQSQREITLKGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPR 431
Query: 367 SADTYLHRVGRAGRFGTKGLAI 388
+ Y+HR GR GR G G+A+
Sbjct: 432 DVEAYIHRSGRTGRAGNTGVAV 453
>Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890321-18881902 | 20130731
Length = 610
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 182/415 (43%), Gaps = 93/415 (22%)
Query: 64 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVA------AL 117
GFE P+ VQ + IP + G + A +G GKT ++ + + ++ AL
Sbjct: 60 GFEGPTLVQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRIQRSDGTFAL 119
Query: 118 VLCHTRELAYQICHE-----FERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGT 172
VL TREL Q+ HE RF +P GG + K L+ I++ T
Sbjct: 120 VLVPTRELCLQV-HEILQKLLHRFHWIVP----GYIMGGESRSKEKARLRKGIS-ILIAT 173
Query: 173 PGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKL-----TPHD----- 221
PGR+L L N+R I DE D++LE L +++QEI L T HD
Sbjct: 174 PGRLLDHLKNTSSFVYTNLRWIIFDEADRILE-LGFGKEIQEILNLLGSMKTGHDDQGNG 232
Query: 222 --------KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDE------------------- 254
+Q ++ SATL++++ + K ++DP+ I +DD+
Sbjct: 233 VPRPTKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKVLEPTSKIRFDNSDCDEDN 292
Query: 255 -----AKLTLHG-------LVQHYIKL-------------------QDSEKNRKLNDLLD 283
+K+ G L+Q Y+K+ + S+K D
Sbjct: 293 EGTYSSKIPAVGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFEREPSQKIVLFFSTCD 352
Query: 284 ALDFNQVVI---FVKSVSRAAELNK-LLVECNFPSICIHSGMSQEERLKRYKGFKEGKQR 339
A+DF+ ++ + + E N+ + + C ++ +H M QE+R ++ FK K
Sbjct: 353 AVDFHYSLLTEFLFSAFPQTEEGNRPMFLGCK--TLRLHGNMEQEDRTTSFQAFKTEKSA 410
Query: 340 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
+L++TD+ RG+D V +I YD P A Y+HRVGR R G +G ++ F+ S
Sbjct: 411 LLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLLFLQPS 465
>Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:46249372-46245255 | 20130731
Length = 641
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 175/375 (46%), Gaps = 38/375 (10%)
Query: 45 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSL 104
+G F + L + + G E +Q + G D++ +A++G GKT FVL L
Sbjct: 43 NGISKFKISEPLREKLKEKGIESLFPIQAMTFDIILQGCDLVGRARTGQGKTLAFVLPIL 102
Query: 105 QQID--------------------------PVPGQVAALVLCHTRELAYQICHEFERFST 138
+ + P + + LVL TRELA Q+ +FE +
Sbjct: 103 ESVTNGKAKETNAKTKETNGNARESRKGGYGGPPKPSVLVLLPTRELACQVNADFEVYGG 162
Query: 139 YLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDEC 198
+ + YGG K + L+ IV+GTPGRI + L ++ +LDE
Sbjct: 163 AM-GLTSCCLYGGAPYKAQEIKLERGV-DIVIGTPGRIKDHIVRGSIDLSQLKFRVLDEA 220
Query: 199 DKMLESLDMRRDVQEIF-KLTPHDK-QVMMFSATLSKEIRPVCKKFM-QDPMEIYVDDEA 255
D+ML + DV+ I K+ D+ Q ++FSATL + ++ + K+F+ +D +
Sbjct: 221 DEMLR-MGFVEDVELILGKVKNVDQVQTLLFSATLPEWVKNIAKRFLKEDKQTADLVGNT 279
Query: 256 KLTLHGLVQHYI-KLQDSEKNRKLNDLLDALDF-NQVVIFVKSVSRAAELNKLLVECNFP 313
K+ V+HYI + +++ + D++ + +IF ++ A++L +LL
Sbjct: 280 KMKASTSVRHYILPCTGAARSQLIPDIIRCYSSEGRTIIFTETKESASQLAELLPGAR-- 337
Query: 314 SICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 373
+H + Q +R GF+ GK LVAT++ RG+DI V ++I + P + Y+H
Sbjct: 338 --ALHGDIQQAQREVTLSGFRYGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIH 395
Query: 374 RVGRAGRFGTKGLAI 388
R GR GR G G+A+
Sbjct: 396 RSGRTGRAGNTGVAV 410
>Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25903244-25908935 | 20130731
Length = 752
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 186/360 (51%), Gaps = 30/360 (8%)
Query: 63 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI-----DPVPGQVAAL 117
S F +++Q +P A+ G DV+ AK+G GKT F++ L+++ P G V ++
Sbjct: 93 SKFVSMTDIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLYRKRWGPEDG-VGSI 151
Query: 118 VLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVN-IKVHKELLKNECPHIVVGTPGRI 176
++ T ELA QI + + + GG + KE + ++++ TPGR+
Sbjct: 152 IISPTWELAGQIFAVLKAIGC-IHGFSAGLLIGGRQGVATEKECVNKL--NVLICTPGRL 208
Query: 177 LA-LTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEI 235
L + + ++ +LDE D++L+S ++++ I P +Q M+FSAT +K +
Sbjct: 209 LQHMDETPNFDCSKMQVLVLDEADRILDS-GFKKELNAIISQLPKRRQTMLFSATQTKSV 267
Query: 236 RPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDF---NQVVI 292
+ + + ++DP I V +E+ L++ + + ++KL+ L + + ++ ++
Sbjct: 268 QDLARLSLKDPEYISVHEESVTATPTLLKQKVMI--VPLDQKLDMLWNFIKTHLKSKTLV 325
Query: 293 FVKSVSRAAELNKLLVEC------NFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDL 346
F+ S + K + E P C+H M QE+R+ Y F E K IL ATD+
Sbjct: 326 FLSSCKQV----KFVFEAFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCE-KCSILFATDV 380
Query: 347 VGRGIDIER-VNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQS 405
RG+D R V+ V+ D P++ +Y+HRVGR R+ + G ++ ++ S ++++L ++++
Sbjct: 381 AARGLDFNRAVDWVVQVDCPENVASYIHRVGRTARYKSLGKSVLYLLPS-ETKMLEKLEA 439
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 183/374 (48%), Gaps = 39/374 (10%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ- 105
F L E++ A+ + G E P+E+Q +P + G V+ + +G GKT ++L +Q
Sbjct: 111 FEGLGLGDEVMGAVREMGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQL 170
Query: 106 -----QIDPV---PGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVH 157
Q++ + P + A+VLC TREL+ Q+ + S + + + GG ++
Sbjct: 171 LRRDEQMNGLVLKPKRPRAVVLCPTRELSEQVFRVAKAISHH-ARFRCTMVSGGGRLRPQ 229
Query: 158 KELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKL 217
+E L N +VVGTPGRIL + ++ ++++ +LDE D M + D+++
Sbjct: 230 EESLSNPI-DMVVGTPGRILQHIEEGNMVYGDIQYVVLDEADTMFDR-GFGPDIKKFLAP 287
Query: 218 TPHDK--------QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH---- 265
H Q ++ +AT++K ++ + + Q + + +LH + +
Sbjct: 288 LKHRASKPDSLGFQTVLVTATMTKAVQNLVDEEFQGIVHLRTS-----SLHKKISNARHD 342
Query: 266 YIKLQDSEKNRKLNDLLDALD-----FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 320
+IKL +E KL+ LL L+ N+V++F +++ + ++ L E ++ H
Sbjct: 343 FIKLSGTEN--KLDSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGE 400
Query: 321 MSQEERLKRYKGFKEGKQR--ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRA 378
+ +R++ FK LV TDL RG+D++ V+ VI +D P ++ YLHR GR
Sbjct: 401 VPAAQRVENLNKFKSNNDDCPTLVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRT 459
Query: 379 GRFGTKGLAITFVS 392
R G KG + V+
Sbjct: 460 ARMGAKGKITSLVT 473
>Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 171/351 (48%), Gaps = 11/351 (3%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMD-VICQAKSGMGKTAVFVLSSLQ 105
F D L +L+ A + P ++Q E IP A+ G D VI + GK FVL LQ
Sbjct: 4 FTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQ 63
Query: 106 QI---DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLK 162
+ P A VL +R+L ++I F+ + +K A +I +
Sbjct: 64 ALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQF-GVKCATLVEANDIIDQTNQIL 122
Query: 163 NECPHIVVGTPGRILALTR-DKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHD 221
+ PH++VGT ++ R + L +++ ++ E D +L + + +I + P +
Sbjct: 123 QQ-PHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSE 181
Query: 222 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDL 281
++ +FS+T+++++ + + +++P++I V + + L Q + K+ L +
Sbjct: 182 RRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQL-QQSCFMPAMLKDCYLVYI 240
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
L + + +F ++ A L +L +F +I I S MSQ ++L FK GK IL
Sbjct: 241 LTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKFNIL 300
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+ ++ RG+DI V++VINY++P + Y+HRVG G AI+FV+
Sbjct: 301 LCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA---AISFVN 348
>Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382212-29375908 | 20130731
Length = 417
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 171/351 (48%), Gaps = 11/351 (3%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMD-VICQAKSGMGKTAVFVLSSLQ 105
F D L +L+ A + P ++Q E IP A+ G D VI + GK FVL LQ
Sbjct: 4 FTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQ 63
Query: 106 QI---DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLK 162
+ P A VL +R+L ++I F+ + +K A +I +
Sbjct: 64 ALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQF-GVKCATLVEANDIIDQTNQIL 122
Query: 163 NECPHIVVGTPGRILALTR-DKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHD 221
+ PH++VGT ++ R + L +++ ++ E D +L + + +I + P +
Sbjct: 123 QQ-PHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSE 181
Query: 222 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDL 281
++ +FS+T+++++ + + +++P++I V + + L Q + K+ L +
Sbjct: 182 RRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQL-QQSCFMPAMLKDCYLVYI 240
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
L + + +F ++ A L +L +F +I I S MSQ ++L FK GK IL
Sbjct: 241 LTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKFNIL 300
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+ ++ RG+DI V++VINY++P + Y+HRVG G AI+FV+
Sbjct: 301 LCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA---AISFVN 348
>Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 171/351 (48%), Gaps = 11/351 (3%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMD-VICQAKSGMGKTAVFVLSSLQ 105
F D L +L+ A + P ++Q E IP A+ G D VI + GK FVL LQ
Sbjct: 4 FTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQ 63
Query: 106 QI---DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLK 162
+ P A VL +R+L ++I F+ + +K A +I +
Sbjct: 64 ALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQF-GVKCATLVEANDIIDQTNQIL 122
Query: 163 NECPHIVVGTPGRILALTR-DKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHD 221
+ PH++VGT ++ R + L +++ ++ E D +L + + +I + P +
Sbjct: 123 QQ-PHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSE 181
Query: 222 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDL 281
++ +FS+T+++++ + + +++P++I V + + L Q + K+ L +
Sbjct: 182 RRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQL-QQSCFMPAMLKDCYLVYI 240
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
L + + +F ++ A L +L +F +I I S MSQ ++L FK GK IL
Sbjct: 241 LTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKFNIL 300
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+ ++ RG+DI V++VINY++P + Y+HRVG G AI+FV+
Sbjct: 301 LCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA---AISFVN 348
>Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 171/351 (48%), Gaps = 11/351 (3%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMD-VICQAKSGMGKTAVFVLSSLQ 105
F D L +L+ A + P ++Q E IP A+ G D VI + GK FVL LQ
Sbjct: 8 FTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQ 67
Query: 106 QI---DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLK 162
+ P A VL +R+L ++I F+ + +K A +I +
Sbjct: 68 ALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQF-GVKCATLVEANDIIDQTNQIL 126
Query: 163 NECPHIVVGTPGRILALTR-DKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHD 221
+ PH++VGT ++ R + L +++ ++ E D +L + + +I + P +
Sbjct: 127 QQ-PHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSE 185
Query: 222 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDL 281
++ +FS+T+++++ + + +++P++I V + + L Q + K+ L +
Sbjct: 186 RRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQL-QQSCFMPAMLKDCYLVYI 244
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
L + + +F ++ A L +L +F +I I S MSQ ++L FK GK IL
Sbjct: 245 LTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKFNIL 304
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+ ++ RG+DI V++VINY++P + Y+HRVG G AI+FV+
Sbjct: 305 LCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA---AISFVN 352
>Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 171/351 (48%), Gaps = 11/351 (3%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMD-VICQAKSGMGKTAVFVLSSLQ 105
F D L +L+ A + P ++Q E IP A+ G D VI + GK FVL LQ
Sbjct: 8 FTDLGLSVQLVEACEKMRWYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQ 67
Query: 106 QI---DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLK 162
+ P A VL +R+L ++I F+ + +K A +I +
Sbjct: 68 ALLEAGPNLNTSFACVLSPSRDLVFRIAEYFQVLGSQF-GVKCATLVEANDIIDQTNQIL 126
Query: 163 NECPHIVVGTPGRILALTR-DKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHD 221
+ PH++VGT ++ R + L +++ ++ E D +L + + +I + P +
Sbjct: 127 QQ-PHLIVGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFEEQQLNDILSIIPSE 185
Query: 222 KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDL 281
++ +FS+T+++++ + + +++P++I V + + L Q + K+ L +
Sbjct: 186 RRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSKYSTVVTQL-QQSCFMPAMLKDCYLVYI 244
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
L + + +F ++ A L +L +F +I I S MSQ ++L FK GK IL
Sbjct: 245 LTEMTGRKSTVFTQTCGSAFLLALILKNLDFRAIPIISYMSQAKKLGALNAFKSGKFNIL 304
Query: 342 VATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+ ++ RG+DI V++VINY++P + Y+HRVG G AI+FV+
Sbjct: 305 LCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA---AISFVN 352
>Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46124357-46130061 | 20130731
Length = 401
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 126/233 (54%), Gaps = 13/233 (5%)
Query: 167 HIVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVM 225
+IVV TPGR+L L K N++ I+DE D++LE+ + ++++I KL P ++Q
Sbjct: 40 NIVVATPGRLLDHLQNTKRFIYNNLKCLIIDEADRILEA-NFEDELKQIIKLLPKNRQTA 98
Query: 226 MFSATLSKEIRPVCK-KFMQDPMEIYVDD-EAKLTLHGLVQHYIKLQDSEKNRKLNDLLD 283
+FSAT +K++ + + F P+ I VDD K+T GL+Q Y+ + +++ L L
Sbjct: 99 LFSATQTKKVEDLARLSFQTTPIYIDVDDGRKKVTNEGLLQGYVVVPCAKRFMVLYSFLK 158
Query: 284 ALDFNQVVIFVKSVS----RAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQR 339
+V++F S + A N + + C+ I+ Q+ R + F + ++
Sbjct: 159 RHKSKKVMVFFSSCNSVKFHADIFNHIHLHCS----SIYGKQKQQTRTTTFVDFCQAEKG 214
Query: 340 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF-GTKGLAITFV 391
IL+ TD+ RG+DI V+ ++ YD PD Y+HRVGR R KG A+ F+
Sbjct: 215 ILLCTDVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGKGNALLFL 267
>Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:55283621-55286718 | 20130731
Length = 537
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 163/395 (41%), Gaps = 60/395 (15%)
Query: 37 KGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKT 96
K + GI G DF+++ ++ + PS +Q P I G I +SG GKT
Sbjct: 131 KSFKGI---GCADFMIE-----SLHNLSLTRPSNIQAMSFPPVIAGKSCIIADQSGSGKT 182
Query: 97 AVFVLSSLQQIDPVPGQ---------VAALVLCHTRELAYQICHEFERFS-TYLPDIKVA 146
+++ +Q++ Q L+L T ELA Q+ H S + + K
Sbjct: 183 LAYLVPIIQRLRQQELQGLHKSSSQSPTLLILAPTAELASQVFHNCRSISKSGVVPFKSM 242
Query: 147 VFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLD 206
+ GG K + L N+ +++ TPGR L L L L N+ +LDE D + D
Sbjct: 243 LVTGGFRQKTQLDTL-NQGVDVLIATPGRFLFLINQGFLHLTNLTCAVLDEVDILFGDED 301
Query: 207 MRRDVQEIFKLTPHDKQVMMFSATLSK-------EIRPVCKKFMQDPM--------EIYV 251
+ +Q + +P D Q + +ATL K E+ P C+ M M EI V
Sbjct: 302 FEKALQCLISSSPVDTQYLFVTATLPKNVYSKLVEVFPDCEMVMGPSMHRINSRLEEIIV 361
Query: 252 D------DEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 305
D E L L + LQ +EKNR + ++F + ++
Sbjct: 362 DCSGEDGQEKTLDTAFLNKKAALLQLAEKNR----------VPRTIVFCNKIETCRKVEN 411
Query: 306 LLVECNFPSICI-----HSGMSQEERLKRYKGFKEGK----QRILVATDLVGRGIDIERV 356
L + I + H+ M+QE RL K F + +V TD RGID RV
Sbjct: 412 ALNRFDRKGIRMQVLPFHAAMTQESRLASMKEFTRSPPKELSQFMVCTDRASRGIDFTRV 471
Query: 357 NIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 391
+ VI +D P Y+ RVGR R G +G F+
Sbjct: 472 DHVILFDYPRDPSEYVRRVGRTAR-GARGQGKAFI 505
>Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:37010922-37003111 | 20130731
Length = 604
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 173/401 (43%), Gaps = 60/401 (14%)
Query: 46 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ 105
F + L L+RA++ E P+ +QH IP + G DV+ +AK+G GKT ++L LQ
Sbjct: 26 SFEELGLDARLVRALLKKRIEKPTPIQHVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQ 85
Query: 106 Q-----IDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKEL 160
+ +D VL +REL QI E + + L KV + +N +
Sbjct: 86 KLFTANVDRKKLAPNVFVLAPSRELCQQIYVEVK---SLLELCKVPLKAVQLNSNMLATD 142
Query: 161 LKNEC---PHIVVGTPGRILALTRDKDLGLKNVR----HFILDECDKMLESLDMRRDVQE 213
L+ P +++ TP I + L ++ +LDE D +L S D++
Sbjct: 143 LQAALVGPPDVLISTPACIAKCLSNSVLQAASINGSLETLVLDEADLLL-SYGYENDIKA 201
Query: 214 IFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYV----DDEAKLTLHGLVQHYIKL 269
+ P Q ++ SAT S ++ + K + +P+ + + + + ++ + Q +I
Sbjct: 202 LTPHIPRSCQCLLMSATSSDDVDKLKKLMLHNPVILTLPEVGNRKDEVIPKNVQQFWIY- 260
Query: 270 QDSEKNRKLNDLLDALDF----NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 325
N KL +L L +V+IF ++ + L L + S +++ + Q
Sbjct: 261 --CPANDKLLYILAMLKLELVQKKVLIFTNNIDTSFRLKLFLEKFGIKSAVLNAELPQNS 318
Query: 326 RLKRYKGFKEGKQRILVATDL---------------------------------VGRGID 352
RL + F G L+ATD+ V RGID
Sbjct: 319 RLHILEEFNAGLFDYLIATDISQSTEKDEAPKENIVGSKKSRKYTKLKLDSEFGVVRGID 378
Query: 353 IERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSS 393
+ V VIN++MP S Y+HR+GR GR + G +I+ VS+
Sbjct: 379 FKNVYTVINFEMPRSVTGYVHRIGRTGRAYSSGTSISLVST 419
>Medtr4g077370.1 | DEAD-box helicase family protein | LC |
chr4:29630577-29632466 | 20130731
Length = 446
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 6/197 (3%)
Query: 46 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ 105
F D L ++R G + P VQ CIP+ + G VI K+G GKTA F L LQ
Sbjct: 250 SFSDLGLSEWMVRGCDKLGMQSPRPVQRHCIPKVLEGRHVIGIDKTGSGKTAAFALPILQ 309
Query: 106 QIDPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNEC 165
++ P V ALVL TRELA Q+ H+F + L I + V GG++ ++ + L
Sbjct: 310 RLGETPFGVFALVLTPTRELAVQLAHQFWILGSSLRLI-LTVVVGGLDKRIQAKQLVAR- 367
Query: 166 PHIVVGTPGRILALTRDK-DLG--LKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDK 222
P++V+ TP R+ L +D ++ + +LDE D++L+ + + +++ IF+ P ++
Sbjct: 368 PNLVIATPERLKILLQDNPEIAPIFAATKFLVLDEADQLLD-VGFQEELKVIFQCLPENR 426
Query: 223 QVMMFSATLSKEIRPVC 239
Q + FSAT++ ++ +C
Sbjct: 427 QNLFFSATMTSNLQKMC 443
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 35/208 (16%)
Query: 46 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ 105
F D L ++ G + P VQ CIP+ + G DV+ ++G GKTA F L LQ
Sbjct: 2 SFSDLGLSEWTVQNCKKLGMQTPRRVQQHCIPKVLEGRDVVGIDETGSGKTAAFALPILQ 61
Query: 106 QI----DPVPGQVAALVLCHTRELAYQICHEFERF-STYLPDIKVAVFYGGVNIKVHKEL 160
++ P V ALVL TRELA Q+ +F S+ LP
Sbjct: 62 RLAEHPKPFGVYVFALVLTPTRELAIQLADQFLALGSSLLP------------------- 102
Query: 161 LKNECPHIVVGTPGRILALTRDKD---LGLKNVRHFILDECDKMLESLDMRRDVQEIFKL 217
PH+V+ TP R+ L D + +LDE D++L+ + R ++ I +
Sbjct: 103 ---TSPHLVIATPERLRVLLLDNPEIATIFATTKFLVLDEADQLLD-VGFRDELNVIVQC 158
Query: 218 TPHDKQVMMFSATLSKEIRPVCKKFMQD 245
P ++Q + FS T++ + KK M D
Sbjct: 159 LPENRQNLFFSETMTSNL----KKMMYD 182
>Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:7041752-7035027 | 20130731
Length = 462
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 149/328 (45%), Gaps = 67/328 (20%)
Query: 68 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVAALVLCHTRELAY 127
P ++Q + IP A+ G DV + GKT FVL Q ++ A+
Sbjct: 26 PLKIQAQVIPLALEGKDVYAISPPRSGKTGAFVLPIFQALN----------------FAF 69
Query: 128 QICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKD-LG 186
+I FE + +K AV +++ + + PHI+V TPG+++ +D
Sbjct: 70 EIARYFEALGQHF-GVKFAVLVSTSDMEYQTNKILQQ-PHIIVATPGKLVKHLKDTPAFS 127
Query: 187 LKNVRHFILDECDKMLES--LDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQ 244
L+ +++ +LDE +LES + R ++ I P ++ +FS + + ++ + F++
Sbjct: 128 LRKLKYLVLDEA-HLLESNYKHIDRQLEFILGKIPRNRTTFLFSDSKTDKVDMIQSVFLR 186
Query: 245 DPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELN 304
+P+ K+++ ++ + Q + K +
Sbjct: 187 NPV-----------------------------KIDESIEYPEQQQCHMPAK--------D 209
Query: 305 KLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDM 364
K+ +P C + +SQ +RL+ FK G +IL+ DL RG+DI V+ VINYD+
Sbjct: 210 KV-----YPLPCPKNIVSQAKRLEALNAFKSGNCKILLCNDLASRGLDIPAVDTVINYDI 264
Query: 365 PDSADTYLHRVGRAGRFGTKGLAITFVS 392
PD Y+H VG+A G+AI+FVS
Sbjct: 265 PDDPRDYMHHVGQA---APTGVAISFVS 289
>Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348848-14341230 | 20130731
Length = 508
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 147/301 (48%), Gaps = 30/301 (9%)
Query: 111 PGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVV 170
P + A+VLC TREL+ Q+ + S + + + GG ++ +E L N +VV
Sbjct: 8 PKRPRAVVLCPTRELSEQVFRVAKAIS-HHARFRCTMVSGGGRLRPQEESLSNPI-DMVV 65
Query: 171 GTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDK-------- 222
GTPGRIL + ++ ++++ +LDE D M + D+++ H
Sbjct: 66 GTPGRILQHIEEGNMVYGDIQYVVLDEADTMFDR-GFGPDIKKFLAPLKHRASKPDSLGF 124
Query: 223 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQH----YIKLQDSEKNRKL 278
Q ++ +AT++K ++ + + Q + + +LH + + +IKL +E KL
Sbjct: 125 QTVLVTATMTKAVQNLVDEEFQGIVHLRTS-----SLHKKISNARHDFIKLSGTEN--KL 177
Query: 279 NDLLDALD-----FNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGF 333
+ LL L+ N+V++F +++ + ++ L E ++ H + +R++ F
Sbjct: 178 DSLLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVENLNKF 237
Query: 334 KEGKQR--ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 391
K LV TDL RG+D++ V+ VI +D P ++ YLHR GR R G KG + V
Sbjct: 238 KSNNDDCPTLVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLV 296
Query: 392 S 392
+
Sbjct: 297 T 297
>Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890320-18881902 | 20130731
Length = 492
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 76/300 (25%)
Query: 168 IVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKL-----TPHD 221
I++ TPGR+L L N+R I DE D++LE L +++QEI L T HD
Sbjct: 51 ILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILE-LGFGKEIQEILNLLGSMKTGHD 109
Query: 222 -------------KQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDE-------------- 254
+Q ++ SATL++++ + K ++DP+ I +DD+
Sbjct: 110 DQGNGVPRPTKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKVLEPTSKIRFDNSD 169
Query: 255 ----------AKLTLHG-------LVQHYIKL-------------------QDSEKNRKL 278
+K+ G L+Q Y+K+ + S+K
Sbjct: 170 CDEDNEGTYSSKIPAVGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFEREPSQKIVLF 229
Query: 279 NDLLDALDFNQVVI---FVKSVSRAAELNK-LLVECNFPSICIHSGMSQEERLKRYKGFK 334
DA+DF+ ++ + + E N+ + + C ++ +H M QE+R ++ FK
Sbjct: 230 FSTCDAVDFHYSLLTEFLFSAFPQTEEGNRPMFLGCK--TLRLHGNMEQEDRTTSFQAFK 287
Query: 335 EGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
K +L++TD+ RG+D V +I YD P A Y+HRVGR R G +G ++ F+ S
Sbjct: 288 TEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLLFLQPS 347
>Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:54963018-54968467 | 20130731
Length = 480
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 175/403 (43%), Gaps = 58/403 (14%)
Query: 55 ELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQV 114
+LL+ + + G+ P+ VQ + +P+ G D I A++G GKT ++L I
Sbjct: 91 QLLQRMEEVGYVMPTPVQKQALPRLFSGRDCILHAQTGSGKTLAYLLLIYSIISTRKSSF 150
Query: 115 AALVLCHTRELAYQICHEFERFSTYLP--------DIKVAVFYGGVNIKVHKELLKNECP 166
ALVL TREL Q+ + R P + G ++ HK K E P
Sbjct: 151 QALVLVPTRELGMQVT-KVARILAAKPTGVEGEQRSCTIMALLDGGTLRRHKSWFKAEPP 209
Query: 167 HIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKL--TPHDKQV 224
IVV T + + + L N+R ++DE D + S +++I + +++Q
Sbjct: 210 AIVVATVESLCQMLERQLFSLGNLRVLVVDEVDFIFNSSKQVSSLRKILTSYSSCNNRQT 269
Query: 225 MMFSATLSKEIR----PVCKKFMQ-----------DPME-------IYVDDEAKL-TLHG 261
+ SA++ + + V +K+ + +PM I D + KL TL
Sbjct: 270 VFASASIPQHNQFLNEAVQQKWTKRDVIHIHVSPVEPMPSRLSHRFIVCDIKRKLQTLLS 329
Query: 262 LVQH--------YIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFP 313
L+Q ++ Q SEK++K + + + V+ F+K+ S L+ LL+E
Sbjct: 330 LIQSDAPESGIIFVSEQ-SEKSKKAGN---SPSTSLVIDFLKT-SYHGSLDILLLE---- 380
Query: 314 SICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLH 373
M+ R ++G +LVATD+ RG+D + + NYD+P +A YLH
Sbjct: 381 -----DDMNFNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNYDLPKTAIDYLH 435
Query: 374 RVGRAGR--FGTKGLAITFVSSSGDSEVLNQVQSRFEVDIKEL 414
R GR R F +T + S + VL + ++ EL
Sbjct: 436 RAGRTCRKPFSDVNCTVTSIIVSQERFVLQRYENELSFVCTEL 478
>Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40426461-40421694 | 20130731
Length = 536
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 115/208 (55%), Gaps = 9/208 (4%)
Query: 193 FILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 252
+LDE D++L+S +++V I P +Q M+FSAT +K ++ + + ++DP I V
Sbjct: 15 LVLDEADRILDS-GFKKEVNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEYISVH 73
Query: 253 DEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDF---NQVVIFVKSVSRAAELNKLLVE 309
+E+ L++ + + ++KL+ L + ++ ++F+ S + + ++ +
Sbjct: 74 EESVTATPTLLKQTVMI--VPLDQKLDMLWTFIKRHLQSKTLVFLSSCKQVKFVFEVFKK 131
Query: 310 CN--FPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIER-VNIVINYDMPD 366
+ P C+H M QE+R+ Y F E K+ +L +TD+ RG+D + V+ V+ D P+
Sbjct: 132 LHPGIPLKCLHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPE 191
Query: 367 SADTYLHRVGRAGRFGTKGLAITFVSSS 394
+ +Y+HRVGR R+ + G ++ F+ S
Sbjct: 192 NVASYIHRVGRTARYNSVGKSVLFLLPS 219
>Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25904178-25909316 | 20130731
Length = 535
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 122/223 (54%), Gaps = 19/223 (8%)
Query: 193 FILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 252
+LDE D++L+S ++++ I P +Q M+FSAT +K ++ + + ++DP I V
Sbjct: 15 LVLDEADRILDS-GFKKELNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEYISVH 73
Query: 253 DEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDF---NQVVIFVKSVSRAAELNKLLVE 309
+E+ L++ + + ++KL+ L + + ++ ++F+ S + K + E
Sbjct: 74 EESVTATPTLLKQKVMI--VPLDQKLDMLWNFIKTHLKSKTLVFLSSCKQV----KFVFE 127
Query: 310 C------NFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIER-VNIVINY 362
P C+H M QE+R+ Y F E K IL ATD+ RG+D R V+ V+
Sbjct: 128 AFKKLHPGIPLKCLHGRMKQEKRMAIYSEFCE-KCSILFATDVAARGLDFNRAVDWVVQV 186
Query: 363 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQS 405
D P++ +Y+HRVGR R+ + G ++ ++ S ++++L ++++
Sbjct: 187 DCPENVASYIHRVGRTARYKSLGKSVLYLLPS-ETKMLEKLEA 228
>Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:33157541-33150855 | 20130731
Length = 497
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 177/413 (42%), Gaps = 78/413 (18%)
Query: 52 LKPELLRAIVDSGFEHPSEVQ----HECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI 107
L P+L A+ D G + VQ HE + D+ + +G GKT + L +Q +
Sbjct: 35 LHPKLKSALEDMGISNLFPVQVAVWHETVGPGNFERDICVNSPTGSGKTLAYALPLVQML 94
Query: 108 DPVPGQVA----ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVH-KELLK 162
G+V ALV+ TR+LA Q+ F+ ++ L ++V + G ++ EL++
Sbjct: 95 S---GRVTKCLRALVVVPTRDLALQVKQVFDAVASPL-GLRVGLAVGQSSLADEISELVE 150
Query: 163 ------NEC--PH------------IVVGTPGRIL-ALTRDKDLGLKNVRHFILDECDKM 201
C PH I+V TPGR++ + L+++ + ++DE D++
Sbjct: 151 MPARDIGTCYDPHCISLPRFQSKVDILVATPGRLMDHINTTIGFTLEHLYYLVVDETDRL 210
Query: 202 L----------------------------------ESLDMRR--DVQEIFKLTPHDKQV- 224
L +L RR V+ FK P+ +
Sbjct: 211 LREAYQSWLPTVLELIQSNDDGFSLPSASFFPCSASALRTRRRCGVERGFKDKPYPRLAK 270
Query: 225 MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDA 284
M+ SATL+++ + + + P+ + L + + + K L LL +
Sbjct: 271 MVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLPENLESYKLICEKKVKPLYLIALLKS 330
Query: 285 LDFNQVVIFVKSVSRAAELNKLLVECNFPSICI-----HSGMSQEERLKRYKGFKEGKQR 339
L + ++F KSV L +LL C F + I S Q R K F++G +
Sbjct: 331 LGEEKCLVFTKSVDSTHRLCQLL-NC-FEDLRIDIKEYSSLQHQRVRSKTLNEFRKGVFQ 388
Query: 340 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
+L+++D + RG+D+E V VINYD+P T++HR GR R G G T +S
Sbjct: 389 VLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGRTARAGQTGRCFTLMS 441
>Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC |
scaffold0427:505-2043 | 20130731
Length = 227
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 38/210 (18%)
Query: 223 QVMMFSATLSKEIRP-VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDL 281
QV+ FSATL+ ++ V + ++ EI+V E +L L + Q+ + D
Sbjct: 23 QVLFFSATLNDIVKNFVTRIVAKEHNEIFVKKE-ELPLKAVKQYKVHCPDE--------- 72
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRIL 341
I K+V++A LV+ ++ I + EER K K FK+G +L
Sbjct: 73 -------LAKIECKNVAKA------LVDLSYKVNSILDALEHEERDKMVKEFKDGSTGVL 119
Query: 342 VATDLVGRGIDIERVNIVINYDMPDS--------------ADTYLHRVGRAGRFGTKGLA 387
++ D++ RG D ++VN+VINYD+P + + Y HRVGRAGRFG KG
Sbjct: 120 ISNDVLARGFDQDQVNLVINYDLPLNYTAEITCGGKPELDCEVYFHRVGRAGRFGRKGAV 179
Query: 388 ITFVSSSGDSEVLNQVQSRFEVDIKELPEQ 417
+ D ++++++++ F + E+ ++
Sbjct: 180 FNLICDERDEKLMSKIENHFGNHVTEVRQK 209
>Medtr8g032230.1 | DEAD-box helicase family protein | HC |
chr8:12119817-12118310 | 20130731
Length = 171
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 10/151 (6%)
Query: 47 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 106
F+D L L+ A G+++P E+Q + IPQA+ G DVI +++G GKT F L L
Sbjct: 11 FKDLGLDELLVEAFEKMGWKNPKEIQLKAIPQALQGKDVIGFSQTGSGKTGAFALPILHA 70
Query: 107 IDPVPGQ-VAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNEC 165
+ P A V+ TRELAYQ+ +FE + + +K AV G +++ V + + +
Sbjct: 71 LLDAPRHGFFACVISPTRELAYQVPEQFEALGSEI-GVKCAVLVGQMDM-VQQSIEIAKG 128
Query: 166 PHIVVGTPGRILALTRDKDLGLKNVRHFILD 196
P I VGTPGR+L LKN + F LD
Sbjct: 129 PDIFVGTPGRVLD-------HLKNTKGFSLD 152
>Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:21843191-21840034 | 20130731
Length = 276
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 37/203 (18%)
Query: 64 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVA------AL 117
GFE P+ +Q + IP + G + A +G GKT ++ + + +V AL
Sbjct: 60 GFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRVQRSDGTFAL 119
Query: 118 VLCHTRELAYQICHE-----FERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGT 172
VL TREL Q+ HE RF +P GG + K L+ I++ T
Sbjct: 120 VLVPTRELCLQV-HEILQKLLHRFHWIVP----GYIMGGESRSKEKARLRKGIS-ILIAT 173
Query: 173 PGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKL-----TPHD----- 221
PGR+L L N+R I DE D++LE L +++QEI L T HD
Sbjct: 174 PGRLLDHLKNTSSFVYTNLRWIIFDEADRILE-LGFGKEIQEILNLLGSMKTGHDDQESG 232
Query: 222 --------KQVMMFSATLSKEIR 236
+Q ++ SATL+++++
Sbjct: 233 VPRPSKFQRQNLLLSATLNEKLK 255
>Medtr8g007360.1 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr8:1486926-1487156 | 20130731
Length = 76
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/50 (68%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Query: 128 QICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRIL 177
ICHE ERF+TYL DIKV VFYG +NIKVHK+LL +IVVGTP RI
Sbjct: 10 HICHEVERFNTYLLDIKVIVFYGSLNIKVHKDLLN--INNIVVGTPRRIF 57
>Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:16475815-16482952 | 20130731
Length = 462
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 152/360 (42%), Gaps = 24/360 (6%)
Query: 46 GFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQ 105
G RD P + R +V + +Q + IP + G D+ + +G GKT +++ +L
Sbjct: 20 GVRDKF--PTISRTLVKFQAARMTSIQAKAIPLLLRGDDLAAYSSNGSGKTLAYLIPALD 77
Query: 106 QI-----DPVPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKV--HK 158
+ +P G + +VLC +A QI + + T L D + G I +
Sbjct: 78 HLCKNKYEPDDG-IIVMVLCPNTMVAIQIDRDIK---TILKDSPQTLQTIGRLIASPGDR 133
Query: 159 ELLKNECPHIVVGTPG--RILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFK 216
+ KN +++ TP R + + ++ I D+ +L D ++
Sbjct: 134 YVRKN----LLIATPAGLRYHHAYDPERIKYDKLKFLIFDDPYLILRFSDQKKWNWVRSN 189
Query: 217 LTPHDKQVMMFSAT-LSKEIRPVCKKFMQDPMEIYVDDEAK----LTLHGLVQHYIKLQD 271
Q+ +FS T L +E + P + V DE + +T L Q +I +
Sbjct: 190 FPKEQLQIAIFSVTKLKRECLLRLLPEGRRPGDFSVIDEVQNRQWVTNDRLEQEFILVPC 249
Query: 272 SEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYK 331
+++ L +L +V++F + +L + +H + E K Y
Sbjct: 250 AKRLITLYIMLKTTKSKKVMVFFSTTESVKFHEELFTFLDVKCYGVHGDQTVSEHSKIYY 309
Query: 332 GFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 391
F ++ IL+ T++ G++I V++++ YD P + Y+H+VGR R KG A+ F+
Sbjct: 310 SFSNAEEMILLCTNIAAFGLNIPDVDLIVQYDPPIDPEEYIHKVGRTARGTRKGNALLFL 369
>Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC |
chr8:34428957-34437037 | 20130731
Length = 917
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 274 KNRKLNDLLDAL------DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERL 327
KNR + DLL + + ++++ K S ++++ L + N + HSG+S +ER
Sbjct: 474 KNR-MKDLLVLMKSSPFAEVKSIIVYCKFQSETDQISRYLNDNNIKAKSYHSGISAKERG 532
Query: 328 KRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 382
+ F K R++VAT G G+D V VI+Y +P S + Y+ +GRAGR G
Sbjct: 533 YVQELFGSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPGSLEEYVQEIGRAGRDG 587
>Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like protein
| LC | chr1:1383737-1377649 | 20130731
Length = 400
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 303 LNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINY 362
+ + F +I I MSQ ++L+ FK G+ IL+ +D + +G+DI V++VINY
Sbjct: 160 VQRFFWRLGFRAIPIMRYMSQAKKLRSLNAFKSGEYNILLCSDFLSKGLDIPAVDMVINY 219
Query: 363 DMPDSADTYLHRVGRAGRFGTKGLAITFVS 392
++P Y++RVG +AI+FVS
Sbjct: 220 NIPRYPKDYIYRVGWTA--AHVNVAISFVS 247
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 70 EVQHECIPQAILGMDVICQAKSGMGKTAVFVLS---SLQQIDPVPGQVAALVLCHTRELA 126
+ Q E IP A+ G DV + G+GKT FVL +L + P ALVL TR LA
Sbjct: 7 KFQKEVIPAALQGNDVFGVSPPGIGKTVSFVLPISHALLETRPNLTPFFALVLHSTRRLA 66
Query: 127 YQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRI---LALTRDK 183
+ +F + +K A+ N K H+ +L +E P I+VG P I L T+
Sbjct: 67 FHTADDFRNLGSQF-GVKCAII-AQENRKEHESILNSEQPRIIVGRPDLILYHLKHTQGF 124
Query: 184 DLGLKNVRHFI 194
L L ++++ +
Sbjct: 125 SLALASLKYLV 135
>Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:34021263-34013553 | 20130731
Length = 313
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 8/191 (4%)
Query: 208 RRDVQEIFKLTPHDKQV-MMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHY 266
R V+ FK P+ + M+ SATL+++ + + + P+ + L +
Sbjct: 69 RCGVERGFKDKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLPENLESYK 128
Query: 267 IKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI-----HSGM 321
+ + K L LL +L + ++F KSV L +LL C F + I S
Sbjct: 129 LICEKKVKPLYLIALLKSLGEEKCLVFTKSVDSTHRLCQLL-NC-FEDLRIDIKEYSSLQ 186
Query: 322 SQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 381
Q R K F++G ++L+++D + R +D+E V VINYD+P TY+HR GR R
Sbjct: 187 HQRVRSKTLNEFRKGVFQVLLSSDALTREMDVEGVRNVINYDVPKFIKTYVHRAGRTARA 246
Query: 382 GTKGLAITFVS 392
G T +S
Sbjct: 247 VQTGRCFTLMS 257
>Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:26237354-26229767 | 20130731
Length = 594
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 241 KFMQDPMEIYVDDEAKLTLHGLVQHYIKLQDSEKNRKLNDLLDALDFNQVVIFVKSVSRA 300
+ Q +E+ VD + K + V H +KL+D + ++ + ++F +V
Sbjct: 399 RLKQRWIEVTVDTQVKELIRA-VNHSLKLEDLDIGSGIH---------RTMVFANTVEAV 448
Query: 301 AELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVI 360
+ K+L + H + +ER + F + K +LV TD RG+DI V+ VI
Sbjct: 449 EAVVKILGYAGLECLRYHKNCTLDERAQTLVDFYD-KGGVLVCTDAAARGVDIPNVSHVI 507
Query: 361 NYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFEVDI 411
D SA +LHR+GR R G GL +T + + + E+++ V+ E+ +
Sbjct: 508 QADFATSAVDFLHRIGRTARAGQIGL-VTSMYTESNRELVDAVRRAGELGL 557
>Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 311 NFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADT 370
F +I I S MSQ ++L K G+ IL+ +D V +G+DI V++VINY++P S +
Sbjct: 27 GFRAIPIISYMSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPND 86
Query: 371 YLHRVGRAGRFGTKGLAITFVS 392
Y++RVG +AI+FVS
Sbjct: 87 YIYRVGWT--VAHVNVAISFVS 106
>Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 311 NFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADT 370
F +I I S MSQ ++L K G+ IL+ +D V +G+DI V++VINY++P S +
Sbjct: 27 GFRAIPIISYMSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPND 86
Query: 371 YLHRVGRAGRFGTKGLAITFVS 392
Y++RVG +AI+FVS
Sbjct: 87 YIYRVGWT--VAHVNVAISFVS 106
>Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 312 FPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTY 371
F +I I S MSQ ++L K G+ IL+ +D V +G+DI V++VINY++P S + Y
Sbjct: 28 FRAIPIISYMSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDY 87
Query: 372 LHRVGRAGRFGTKGLAITFVS 392
++RVG +AI+FVS
Sbjct: 88 IYRVGWT--VAHVNVAISFVS 106
>Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 312 FPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTY 371
F +I I S MSQ ++L K G+ IL+ +D V +G+DI V++VINY++P S + Y
Sbjct: 28 FRAIPIISYMSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDY 87
Query: 372 LHRVGRAGRFGTKGLAITFVS 392
++RVG +AI+FVS
Sbjct: 88 IYRVGWT--VAHVNVAISFVS 106
>Medtr2g088350.1 | helicase family carboxy-terminal domain protein |
LC | chr2:37222042-37223590 | 20130731
Length = 184
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Query: 333 FKEGKQRILV--ATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRF 381
+K+ RI+V A DL GI+I+ VN+VIN+D P +++TYLHRVG +GRF
Sbjct: 130 WKKLAYRIVVQFALDLSRGGINIQAVNVVINFDFPKNSETYLHRVGWSGRF 180
>Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 | HC
| chr8:6234340-6233617 | 20130731
Length = 176
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 68/127 (53%), Gaps = 10/127 (7%)
Query: 291 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQE--ERLKRYKGFKEGKQRILVATDLVG 348
++FV ++ + L + + IH Q + ++R F+ G ++L+ TD +
Sbjct: 51 IVFVNTIDKVDWLTDKMRSRD--HYVIHGDRDQNTMDTIEREFLFESGSPQVLITTDPLV 108
Query: 349 RGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEVLNQVQSRFE 408
G D+ + ++V+NYD+P + YL+ +GR+G+F AI F+ ++ +L +Q +
Sbjct: 109 CGTDLHKASLVVNYDLPTVPENYLNHIGRSGKF-----AINFMIED-EANMLIDIQKFYN 162
Query: 409 VDIKELP 415
+ I+ELP
Sbjct: 163 MVIEELP 169
>Medtr8g018330.1 | eukaryotic translation initiation factor 4A1 | LC
| chr8:6227164-6226359 | 20130731
Length = 177
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 282 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGF--KEGKQR 339
L A ++FV ++ + L L + I SQ+ R + F + +
Sbjct: 41 LKAKSITHCIVFVNTMDKVDWLMDELRSRDHKVFVILKFFSQDIRDIVTREFFSQSSSPQ 100
Query: 340 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEV 399
+L+ TD G D+ + ++++NYD+P + YLHR+GR+ +F AI F++ S +
Sbjct: 101 VLITTDPQLCGADVHKASLIVNYDLPTVPENYLHRIGRSEKF-----AINFMTEDETSMI 155
Query: 400 LNQVQSRFEVDIKELP 415
++ +Q + + I+ELP
Sbjct: 156 ID-IQKFYNMVIEELP 170
>Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37328725-37334465 | 20130731
Length = 603
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 281 LLDALDFNQVVIFVKSVSRAAELNKLLVE-CNFPSICIHSGMSQEERLKRYKGFKEGKQR 339
L+D +++ S S +++K L E C + H+G++ +R+ K + +G+
Sbjct: 416 LMDRFKSQCGIVYCLSKSECVDVSKFLNEKCKIKAAYYHAGLAARQRVAVQKKWHDGEVH 475
Query: 340 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSSGDSEV 399
I+ AT G GID V VI+ M S ++Y GRAGR + I S V
Sbjct: 476 IVCATIAFGMGIDKADVRFVIHNTMSKSIESYYQESGRAGRDNLPAVCIALYQKKDFSRV 535
Query: 400 LNQVQS 405
+ +++
Sbjct: 536 VCMIRN 541
>Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050056-37045638 | 20130731
Length = 614
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 272 SEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYK 331
++ ++L L + L +I+V + + K L + + ++G+ + + +K
Sbjct: 491 TKPEKRLKMLKEPLGQGPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHK 550
Query: 332 GFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 382
F E ++VAT G GID V +I+Y P S + Y GRAGR G
Sbjct: 551 EFHENTLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDG 601
>Medtr8g079452.1 | helicase family carboxy-terminal domain protein |
HC | chr8:34005644-34004777 | 20130731
Length = 113
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 328 KRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLA 387
K F++G ++L+++D + R +D+E V VINYD+P TY+HR GR R G
Sbjct: 24 KTLNEFRKGVFQVLLSSDALTRVMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGRC 83
Query: 388 ITFVSSSGDSEVLN 401
T +S ++ N
Sbjct: 84 FTLMSEDEANDYCN 97
>Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043455 | 20130731
Length = 876
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 276 RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKE 335
++L L + L +I+V + + K L + + ++G+ + + +K F E
Sbjct: 495 KRLKMLKEPLGQGPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHE 554
Query: 336 GKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 382
++VAT G GID V +I+Y P S + Y GRAGR G
Sbjct: 555 NTLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDG 601
>Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043472 | 20130731
Length = 768
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 276 RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKE 335
++L L + L +I+V + + K L + + ++G+ + + +K F E
Sbjct: 495 KRLKMLKEPLGQGPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHE 554
Query: 336 GKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 382
++VAT G GID V +I+Y P S + Y GRAGR G
Sbjct: 555 NTLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDG 601
>Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050187-37043472 | 20130731
Length = 768
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 276 RKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKE 335
++L L + L +I+V + + K L + + ++G+ + + +K F E
Sbjct: 495 KRLKMLKEPLGQGPTIIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHE 554
Query: 336 GKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 382
++VAT G GID V +I+Y P S + Y GRAGR G
Sbjct: 555 NTLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDG 601
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 148/349 (42%), Gaps = 36/349 (10%)
Query: 51 LLKPELLRAIVDSGFEHPS--EVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID 108
L E L ++ F +P +Q E I + G D C +G GK+ + + +L +
Sbjct: 24 LCSKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEG 83
Query: 109 PVPGQVAALVLCHTRELAYQ---ICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNE- 164
V + L + +A + I EF L K A K+H++L +
Sbjct: 84 IVLVVCPLIALMENQVMALKEKGIAAEF------LSSTKTA----KAKDKIHEDLGSGKP 133
Query: 165 -------CPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESL--DMRRDVQEIF 215
P ++ TPG + LT+ GL ++ +DE + S D R +++
Sbjct: 134 STRLLYVTPELI-ATPGFMSKLTKIHSRGLLSL--IAIDEA-HCISSWGHDFRPTYRKLS 189
Query: 216 KLTPH--DKQVMMFSATLSKEIRP--VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQD 271
L H D ++ +AT +++ V MQ+ + I + ++ V++ L D
Sbjct: 190 TLRSHLPDVPILALTATAVPKVQKDVVESLHMQNAL-ILKTSFNRPNIYYEVRYKDLLDD 248
Query: 272 SEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYK 331
S + L+D L ++ +I+ S +L+ L + H+G++ + R
Sbjct: 249 SYSD--LSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLH 306
Query: 332 GFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 380
+ K +++VAT G GID + V IV ++++P S + + GRAGR
Sbjct: 307 DWISSKTKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGR 355
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 148/349 (42%), Gaps = 36/349 (10%)
Query: 51 LLKPELLRAIVDSGFEHPS--EVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQID 108
L E L ++ F +P +Q E I + G D C +G GK+ + + +L +
Sbjct: 24 LCSKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEG 83
Query: 109 PVPGQVAALVLCHTRELAYQ---ICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNE- 164
V + L + +A + I EF L K A K+H++L +
Sbjct: 84 IVLVVCPLIALMENQVMALKEKGIAAEF------LSSTKTA----KAKDKIHEDLGSGKP 133
Query: 165 -------CPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESL--DMRRDVQEIF 215
P ++ TPG + LT+ GL ++ +DE + S D R +++
Sbjct: 134 STRLLYVTPELI-ATPGFMSKLTKIHSRGLLSL--IAIDEA-HCISSWGHDFRPTYRKLS 189
Query: 216 KLTPH--DKQVMMFSATLSKEIRP--VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQD 271
L H D ++ +AT +++ V MQ+ + I + ++ V++ L D
Sbjct: 190 TLRSHLPDVPILALTATAVPKVQKDVVESLHMQNAL-ILKTSFNRPNIYYEVRYKDLLDD 248
Query: 272 SEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYK 331
S + L+D L ++ +I+ S +L+ L + H+G++ + R
Sbjct: 249 SYSD--LSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLH 306
Query: 332 GFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 380
+ K +++VAT G GID + V IV ++++P S + + GRAGR
Sbjct: 307 DWISSKTKVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGR 355
>Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC |
chr3:28524625-28534220 | 20130731
Length = 908
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%)
Query: 290 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATDLVGR 349
+I+ ++ ++ K L E + H M + R + ++ F + +I+VAT G
Sbjct: 234 TIIYCTTIKDVEQIYKSLTEVGINAGMYHGQMDGKSREESHRLFVRDEMQIMVATIAFGM 293
Query: 350 GIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSS 394
GID + VI+Y P + ++Y GR GR G + + + S
Sbjct: 294 GIDKPNIRKVIHYGCPKNLESYYQESGRCGRDGIASVCWLYYTRS 338