Miyakogusa Predicted Gene

Lj0g3v0208329.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0208329.1 Non Characterized Hit- tr|B9SRA4|B9SRA4_RICCO
Putative uncharacterized protein OS=Ricinus communis G,49.09,3e-17,
,CUFF.13354.1
         (145 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g072610.1 | hypothetical protein | HC | chr8:30696151-3069...   167   3e-42
Medtr5g024910.1 | hypothetical protein | HC | chr5:10072583-1007...   141   2e-34

>Medtr8g072610.1 | hypothetical protein | HC |
           chr8:30696151-30697022 | 20130731
          Length = 125

 Score =  167 bits (423), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 96/136 (70%), Positives = 108/136 (79%), Gaps = 13/136 (9%)

Query: 1   MGHMSYSRVSSAKFSACSSQGSSRGFRLNPRKVYVFRLRKRFNCFLRLFDNLKLSYFDAL 60
           MGHMSY+RVS+         GS++GFRLNPRK YV RLRKRFN FLRLF+NLKLSY DAL
Sbjct: 1   MGHMSYNRVSN---------GSNKGFRLNPRKFYVLRLRKRFNFFLRLFNNLKLSYGDAL 51

Query: 61  QLLKKVVWRRGSFRRNNSSKRSLVRKEQIIKGQAD-CRMRSSYYGRSNSFYAEAIADCLE 119
           Q+LKKV  R+  F+RNNSS+RSLVR E+ +KG  D  +MRSS YGRSNSFYAEAI DCLE
Sbjct: 52  QMLKKVFCRKIGFKRNNSSRRSLVRDEE-VKGHDDYWKMRSS-YGRSNSFYAEAIEDCLE 109

Query: 120 FIKTTSSIPSKDQIQD 135
           FIK T SI SKDQIQD
Sbjct: 110 FIKRT-SISSKDQIQD 124


>Medtr5g024910.1 | hypothetical protein | HC |
           chr5:10072583-10071716 | 20130731
          Length = 149

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/149 (59%), Positives = 101/149 (67%), Gaps = 9/149 (6%)

Query: 1   MGHMSYSRVSSAKFSACSS----QGSSRGFRLNPRKVYVFRLRKRFNCFLRLFDNLKLSY 56
           M  MSY+RVSS   S+        G  RGFRLN  ++Y  RLRKR N FLR+FD LKLS+
Sbjct: 1   MNQMSYNRVSSTSSSSGRGSSFYHGKCRGFRLNLTRLYFSRLRKRVNFFLRIFDKLKLSH 60

Query: 57  FDALQLLKKVVWRRGSFRRNNS-SKRSLVRKEQIIKGQADCRMRSSYYGRSNSFYAEAIA 115
               QLLKKV  R+  F+RNNS S R+ + K++ IKGQ DCR  S  YGR+NSFYAEAIA
Sbjct: 61  VQGFQLLKKVFCRKSGFKRNNSNSSRNGLMKDERIKGQGDCRFSS--YGRNNSFYAEAIA 118

Query: 116 DCLEFIKTTSSIPSKDQIQDPI-NHFQDR 143
           DCLEFIK T SI S DQIQDPI  H  DR
Sbjct: 119 DCLEFIKRT-SISSMDQIQDPIVVHIHDR 146