Miyakogusa Predicted Gene

Lj0g3v0208039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0208039.1 tr|B6T1F9|B6T1F9_MAIZE Lipid binding protein
OS=Zea mays PE=2 SV=1,46.85,1e-18,Bifunctional
inhibitor/lipid-transfer protein/seed storage 2S albumin,Bifunctional
inhibitor/plant l,CUFF.13334.1
         (192 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g079210.1 | Lipid transfer protein | HC | chr3:35630248-35...   151   4e-37
Medtr1g103490.1 | Lipid transfer protein | HC | chr1:46837798-46...    71   7e-13
Medtr2g008580.1 | Lipid transfer protein | HC | chr2:1540285-153...    68   5e-12
Medtr5g006950.1 | Lipid transfer protein | HC | chr5:1146399-114...    67   8e-12
Medtr5g070360.1 | Lipid transfer protein | HC | chr5:29804370-29...    65   4e-11
Medtr1g103450.1 | Lipid transfer protein | HC | chr1:46824422-46...    63   2e-10
Medtr2g008560.1 | Lipid transfer protein | HC | chr2:1536456-153...    59   4e-09
Medtr7g095230.1 | Lipid transfer protein | HC | chr7:38109826-38...    57   9e-09
Medtr1g103470.1 | Lipid transfer protein | HC | chr1:46828698-46...    55   5e-08
Medtr8g446830.1 | Lipid transfer protein | HC | chr8:18323481-18...    47   1e-05

>Medtr3g079210.1 | Lipid transfer protein | HC |
           chr3:35630248-35627567 | 20130731
          Length = 206

 Score =  151 bits (382), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/150 (58%), Positives = 98/150 (65%), Gaps = 4/150 (2%)

Query: 46  CFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIESNPICLCQLLGK--PDFVGIKIN 103
           C  ALTN+SDCLTFVE GS LTKPDKGCCPE AGLI+ NPICLC+LLG    D  GIKIN
Sbjct: 50  CLMALTNMSDCLTFVEDGSKLTKPDKGCCPELAGLIDGNPICLCKLLGSNTADSFGIKIN 109

Query: 104 LNKAIKLPSVCGVDTPPVSTCSVIGVPVSLPPSSEGLXXXXXXXXXXXXXXXXXXXXXXX 163
           +NKA+KLP++CGV TPPVS CS IGVPVSLPPS  G                        
Sbjct: 110 VNKALKLPTICGVTTPPVSACSAIGVPVSLPPSLSGDAMSPNMAMSPKGLALSPSTSSDS 169

Query: 164 XXXVGTSGNK-NGASGIQAFSLPTFIFALS 192
              +  SG+K  GAS IQA +L T IFALS
Sbjct: 170 SGVLSPSGSKIGGASSIQASAL-TLIFALS 198


>Medtr1g103490.1 | Lipid transfer protein | HC |
           chr1:46837798-46839766 | 20130731
          Length = 156

 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 46  CFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIESNPICLCQLL-GKPDFVGIKINL 104
           C   L N+S CL ++   S  + P  GCC + A +++S P CLCQ+L G    +GIK+N 
Sbjct: 28  CTNVLVNLSPCLDYITGKS--STPTSGCCTQLASVVKSQPQCLCQVLDGGGSSLGIKVNQ 85

Query: 105 NKAIKLPSVCGVDTPPVSTCSVIGVPV---SLPPSSEG 139
            +A+ LPS C V TPP S C     P    ++P + +G
Sbjct: 86  TQALALPSACNVQTPPTSQCKTANSPAGARTVPSTDDG 123


>Medtr2g008580.1 | Lipid transfer protein | HC |
           chr2:1540285-1539002 | 20130731
          Length = 207

 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 48/80 (60%)

Query: 45  DCFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIESNPICLCQLLGKPDFVGIKINL 104
           DC T +  ++DCL+FV   S +TKP   CC     +++++P CLC  L     +G+ +N+
Sbjct: 34  DCSTIVVIMADCLSFVSNDSTITKPSGACCSGLKTVLKTSPTCLCDSLKNSANLGVVLNV 93

Query: 105 NKAIKLPSVCGVDTPPVSTC 124
            KA  LP+ CG+  PP+S C
Sbjct: 94  TKAATLPAACGLSAPPLSNC 113


>Medtr5g006950.1 | Lipid transfer protein | HC |
           chr5:1146399-1147714 | 20130731
          Length = 168

 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 45  DCFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIESNPICLCQLL-GKPDFVGIKIN 103
            C   L ++S CL ++    N + P  GCC   A ++ S P+CLCQ+L G    +GI IN
Sbjct: 27  SCTNVLVSLSPCLNYITG--NSSTPSSGCCSNLASVVSSQPLCLCQVLGGGASSLGISIN 84

Query: 104 LNKAIKLPSVCGVDTPPVSTC 124
             +A+ LP  C V TPP S C
Sbjct: 85  QTQALALPGACKVQTPPTSQC 105


>Medtr5g070360.1 | Lipid transfer protein | HC |
           chr5:29804370-29802224 | 20130731
          Length = 190

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 44  VDCFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIESNPICLCQLLGKPDFVGIKIN 103
           VDC   +  ++DCL+FV  GS  TKP+  CC     ++++ P CLC+        G+ +N
Sbjct: 33  VDCTNLVLTMADCLSFVTNGSTTTKPEGTCCSGLKSVLKTAPSCLCEAFKSSAQFGVVLN 92

Query: 104 LNKAIKLPSVCGVDTPPVSTC---SVIGVPVSLP 134
           + KA  LP+ C V  P  + C    V   P S P
Sbjct: 93  VTKATSLPAACKVSAPSATKCGLSEVTEAPASAP 126


>Medtr1g103450.1 | Lipid transfer protein | HC |
           chr1:46824422-46825180 | 20130731
          Length = 154

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 6/99 (6%)

Query: 45  DCFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIESNPICLCQLLGKPDFVGIKINL 104
           +C  AL ++  CL +V   S    P  GCC + A +++S P CLC ++G      + IN 
Sbjct: 27  NCTDALMSLMPCLGYVRGNS--PTPTAGCCTQLANVVKSQPECLCLIIGSDLGSSLGINK 84

Query: 105 NKAIKLPSVCGVDTPPVSTCSVIGVP----VSLPPSSEG 139
             A+ LP+ C V+TPPVS C  +  P     ++PP++ G
Sbjct: 85  TLALALPAACNVETPPVSQCETVANPPAGSRTVPPTAGG 123


>Medtr2g008560.1 | Lipid transfer protein | HC |
           chr2:1536456-1535394 | 20130731
          Length = 172

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 44/80 (55%)

Query: 45  DCFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIESNPICLCQLLGKPDFVGIKINL 104
           +C   +  ++DC +F+  GS LT+P+  CC     ++ + P CLC        +G+ +N+
Sbjct: 31  ECSKLVLAMTDCFSFLTNGSTLTQPEGSCCNGLKTIVNTAPSCLCGAFKGNAHLGVVLNV 90

Query: 105 NKAIKLPSVCGVDTPPVSTC 124
           +KA+ LP  C V  P +S C
Sbjct: 91  SKALTLPFACKVSAPSISNC 110


>Medtr7g095230.1 | Lipid transfer protein | HC |
           chr7:38109826-38108564 | 20130731
          Length = 184

 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 5/83 (6%)

Query: 45  DCFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIESNPICLCQLL-GKPDFVGIKIN 103
           +C   L ++S CL ++   +  + P  GCC + A ++ S P CLC+++ G    +   +N
Sbjct: 30  NCANVLISLSPCLDYITGQT--STPSSGCCSQLASVVGSQPQCLCEVVDGGASSIAASLN 87

Query: 104 LN--KAIKLPSVCGVDTPPVSTC 124
           +N  +A+ LP  C + TPP++TC
Sbjct: 88  INQTRALALPMACNIQTPPINTC 110


>Medtr1g103470.1 | Lipid transfer protein | HC |
           chr1:46828698-46829625 | 20130731
          Length = 164

 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 3/86 (3%)

Query: 45  DCFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIESNPICLCQLLGKPDFVGIKINL 104
            C   + ++  CL +V    N + P  GCC + A +++S P CLC ++G      + IN 
Sbjct: 27  SCTNEIASLLSCLDYVTG--NSSAPTIGCCTQLANVVKSQPECLCLIIGGKG-SSLGINQ 83

Query: 105 NKAIKLPSVCGVDTPPVSTCSVIGVP 130
             A+ LP+ C V TPPVS C +   P
Sbjct: 84  TLALALPAACNVQTPPVSLCKIANPP 109


>Medtr8g446830.1 | Lipid transfer protein | HC |
           chr8:18323481-18325978 | 20130731
          Length = 195

 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)

Query: 45  DCFTALTNVSDCLTFVEAGSNLTKPDKGCCPEFAGLIESNPICLCQLL---GKPDFVGIK 101
           +C   LT ++ CL +VE       PD  CC     L+++N  CLC ++     PD  GI 
Sbjct: 33  ECTAQLTGLASCLPYVEGEGKTPAPD--CCDGLKTLLKTNKKCLCVIIKDRNDPDLGGIV 90

Query: 102 INLNKAIKLPSVC 114
           IN+  A+ LP+VC
Sbjct: 91  INVTLALNLPTVC 103