Miyakogusa Predicted Gene

Lj0g3v0207759.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0207759.1 Non Characterized Hit- tr|K4CAS5|K4CAS5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,39.55,2e-17,seg,NULL,CUFF.13315.1
         (188 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g095160.1 | hypothetical protein | HC | chr7:38054345-3805...   124   5e-29
Medtr1g071810.1 | hypothetical protein | HC | chr1:31888975-3188...   115   3e-26
Medtr1g071810.2 | hypothetical protein | HC | chr1:31888756-3188...   115   3e-26

>Medtr7g095160.1 | hypothetical protein | HC |
           chr7:38054345-38057190 | 20130731
          Length = 195

 Score =  124 bits (311), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 94/204 (46%), Gaps = 32/204 (15%)

Query: 5   VVVEQHRNQCYSRSKPQGHAQFGSSPSRDFIGFNCRNFQKSHG----------------- 47
           +VV QHRNQ       Q HA+FGSSPS+ F G NCR FQ  +G                 
Sbjct: 4   LVVPQHRNQS------QEHARFGSSPSKQFRGINCRTFQTGYGILPTPFKSTTSPSPDNK 57

Query: 48  --SPKTPPHVNDNKIYGKKTTTKSSPIPINDKACRKDTTLSFSEDVTGGNGSFLLSELWA 105
              PKT P    +     K    S+P+ I DK CRKD            NGSF LSELWA
Sbjct: 58  SKIPKTTPVSKHDNKRQTKVEPNSAPVAIKDKGCRKDRIF------VDPNGSFSLSELWA 111

Query: 106 GXXXXXXXXXXXXXXXXXXVQPKRTVSLNLPGSS-PEVEXXXXXXXXXXXXGREHVPSTR 164
           G                  V+PKRTVSL LP S  PE+E              E  P  R
Sbjct: 112 GPTYSNSPPPSSLPIPKFSVRPKRTVSLELPVSDLPEIEMRKIANSAPCSPRGEDSPFAR 171

Query: 165 GFFVNADSATETLCRILNLNIIDE 188
            F V  DSAT+TLCRILNLN+ DE
Sbjct: 172 DFLVKDDSATKTLCRILNLNLDDE 195


>Medtr1g071810.1 | hypothetical protein | HC |
           chr1:31888975-31886676 | 20130731
          Length = 266

 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/142 (50%), Positives = 84/142 (59%), Gaps = 6/142 (4%)

Query: 47  GSPKTPPHVNDNKIYGKKTTTKSSPIPINDKACRKDTTLSFSEDVTGGNGSFLLSELWAG 106
           G+P      N+N    +KTT KS+PIPIN KACRK+ T  F ED++GG  SFLLSELWAG
Sbjct: 131 GTPMKSRSFNENP--DRKTTPKSNPIPINGKACRKEIT--FDEDLSGG--SFLLSELWAG 184

Query: 107 XXXXXXXXXXXXXXXXXXVQPKRTVSLNLPGSSPEVEXXXXXXXXXXXXGREHVPSTRGF 166
                             V+PKRTVSL+LPGSSPE+E             RE +  T   
Sbjct: 185 PTYSNSPPPSSLPIPKFTVRPKRTVSLDLPGSSPEIELRIMAKSAPSSPNRERLCFTSDL 244

Query: 167 FVNADSATETLCRILNLNIIDE 188
           F NADSAT+TL RILNLN+ DE
Sbjct: 245 FDNADSATKTLRRILNLNLEDE 266



 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 58/95 (61%), Gaps = 16/95 (16%)

Query: 1  METLVVVEQHRNQCYSRSKPQGHAQFGSSPSRDFIGFNCRNFQKSHGSPKTPPHVND-NK 59
          METLVVVEQH+NQ         HA     PSRDFIG NCR F+  +G   TP      N+
Sbjct: 1  METLVVVEQHKNQ--------DHA-----PSRDFIGINCRTFESGYGVLPTPLRSQSFNE 47

Query: 60 IYGKKTTTKSSPIPINDKACRKDTTLSFSEDVTGG 94
             KK++ +S+ IPIN K CRKD  L+F ED++GG
Sbjct: 48 NPHKKSSHRSNSIPINGKGCRKD--LTFDEDLSGG 80


>Medtr1g071810.2 | hypothetical protein | HC |
           chr1:31888756-31886676 | 20130731
          Length = 266

 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/142 (50%), Positives = 84/142 (59%), Gaps = 6/142 (4%)

Query: 47  GSPKTPPHVNDNKIYGKKTTTKSSPIPINDKACRKDTTLSFSEDVTGGNGSFLLSELWAG 106
           G+P      N+N    +KTT KS+PIPIN KACRK+ T  F ED++GG  SFLLSELWAG
Sbjct: 131 GTPMKSRSFNENP--DRKTTPKSNPIPINGKACRKEIT--FDEDLSGG--SFLLSELWAG 184

Query: 107 XXXXXXXXXXXXXXXXXXVQPKRTVSLNLPGSSPEVEXXXXXXXXXXXXGREHVPSTRGF 166
                             V+PKRTVSL+LPGSSPE+E             RE +  T   
Sbjct: 185 PTYSNSPPPSSLPIPKFTVRPKRTVSLDLPGSSPEIELRIMAKSAPSSPNRERLCFTSDL 244

Query: 167 FVNADSATETLCRILNLNIIDE 188
           F NADSAT+TL RILNLN+ DE
Sbjct: 245 FDNADSATKTLRRILNLNLEDE 266



 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 58/95 (61%), Gaps = 16/95 (16%)

Query: 1  METLVVVEQHRNQCYSRSKPQGHAQFGSSPSRDFIGFNCRNFQKSHGSPKTPPHVND-NK 59
          METLVVVEQH+NQ         HA     PSRDFIG NCR F+  +G   TP      N+
Sbjct: 1  METLVVVEQHKNQ--------DHA-----PSRDFIGINCRTFESGYGVLPTPLRSQSFNE 47

Query: 60 IYGKKTTTKSSPIPINDKACRKDTTLSFSEDVTGG 94
             KK++ +S+ IPIN K CRKD  L+F ED++GG
Sbjct: 48 NPHKKSSHRSNSIPINGKGCRKD--LTFDEDLSGG 80