Miyakogusa Predicted Gene

Lj0g3v0207209.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0207209.3 Non Characterized Hit- tr|Q84RE5|Q84RE5_ARATH
Putative uncharacterized protein At2g23755/F27L4.16 OS,64.86,0.0008,
,CUFF.13292.3
         (76 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g078730.1 | hypothetical protein | HC | chr8:33512321-3351...    55   2e-08

>Medtr8g078730.1 | hypothetical protein | HC |
          chr8:33512321-33513667 | 20130731
          Length = 129

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/32 (84%), Positives = 28/32 (87%), Gaps = 1/32 (3%)

Query: 1  MATSR-RLFNFCSLLMATLFMYSASVQLNDPG 31
          MATS  RLFN CSLLM+TLF YSASVQLNDPG
Sbjct: 1  MATSSSRLFNLCSLLMSTLFAYSASVQLNDPG 32