Miyakogusa Predicted Gene

Lj0g3v0207209.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0207209.2 Non Characterized Hit- tr|B9S8S5|B9S8S5_RICCO
Putative uncharacterized protein OS=Ricinus communis G,37.13,1e-16,
,CUFF.13292.2
         (164 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g078730.1 | hypothetical protein | HC | chr8:33512321-3351...    64   5e-11

>Medtr8g078730.1 | hypothetical protein | HC |
           chr8:33512321-33513667 | 20130731
          Length = 129

 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 7/56 (12%)

Query: 86  AGFWSLDLSKRVVREKIGSVLVVLSTFLQMEASKFQNDPQKNREKDVSSIVKHGML 141
            GFWSLDLS+RVVREK+GS+ V++S F QMEA+        + +KD+S++VK+G L
Sbjct: 31  PGFWSLDLSERVVREKVGSIFVIISIFFQMEAA-------SDVQKDISNVVKYGEL 79