Miyakogusa Predicted Gene

Lj0g3v0207119.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0207119.2 tr|Q1KS95|Q1KS95_ARATH Protein prenyltransferase
alpha subunit-related OS=Arabidopsis thaliana
GN=At,64.81,0.00000000000003,PPTA,Protein prenyltransferase, alpha
subunit; seg,NULL; SUBFAMILY NOT NAMED,NULL; PROTEIN
FARNESYLT,CUFF.13263.2
         (158 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g006785.1 | protein prenyltransferase alpha subunit repeat...   210   4e-55

>Medtr8g006785.1 | protein prenyltransferase alpha subunit repeat
           protein | HC | chr8:962970-969737 | 20130731
          Length = 465

 Score =  210 bits (535), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 101/122 (82%), Positives = 108/122 (88%)

Query: 18  KSEQAWNHRRWVIKSISTNCSNFKEILGKESELVEKIAERSKMNYRAWNHRCWLISYMTT 77
           KSEQAW+HRRWVIKSIS NCSNFKEILGKESELVEKIAERSKMNYRAWNHRCWLISYMT 
Sbjct: 187 KSEQAWSHRRWVIKSISANCSNFKEILGKESELVEKIAERSKMNYRAWNHRCWLISYMTK 246

Query: 78  GQVLDELKKSRSWAALHVADNCVFHYRQRLLQKIMDDRSGVEETASYGYGADISQALKVI 137
            QVL ELKKSR WAALHV+DNC FHYR+RLLQKIM+DRS  EETASYG+  DI Q +K  
Sbjct: 247 EQVLLELKKSRIWAALHVSDNCCFHYRRRLLQKIMEDRSNAEETASYGHNDDIVQEVKEK 306

Query: 138 VM 139
           +M
Sbjct: 307 IM 308