Miyakogusa Predicted Gene

Lj0g3v0206779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206779.1 Non Characterized Hit- tr|C4J6G1|C4J6G1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,34.93,1e-18,UNCHARACTERIZED,NULL; SERINE INCORPORATOR,TMS
membrane protein/tumour differentially expressed prote,CUFF.13239.1
         (310 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g046480.1 | TMS membrane protein/tumor differentially prot...   418   e-117
Medtr8g103740.1 | serinc-domain serine and sphingolipid biosynth...   222   4e-58
Medtr6g086060.1 | serinc-domain serine and sphingolipid biosynth...   217   9e-57
Medtr6g086060.2 | serinc-domain serine and sphingolipid biosynth...   217   9e-57
Medtr6g086060.3 | serinc-domain serine and sphingolipid biosynth...   217   9e-57
Medtr8g103740.2 | serinc-domain serine and sphingolipid biosynth...   177   1e-44
Medtr2g022060.1 | TMS membrane protein/tumor differentially prot...   114   8e-26
Medtr7g057720.1 | serinc-domain serine and sphingolipid biosynth...    99   4e-21
Medtr7g057720.2 | serinc-domain serine and sphingolipid biosynth...    90   2e-18
Medtr8g103740.3 | serinc-domain serine and sphingolipid biosynth...    85   8e-17

>Medtr1g046480.1 | TMS membrane protein/tumor differentially protein
           | HC | chr1:17517299-17521651 | 20130731
          Length = 427

 Score =  418 bits (1074), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/265 (78%), Positives = 233/265 (87%), Gaps = 7/265 (2%)

Query: 16  IQVSDRPST--EEVTASLD----DYAAERKKSLQARYYFGIIFLIMNLVAWFFRDYGQSL 69
           + VSDR +   EEVT+SL+    DY  ER KSL ARY FGIIFLIMNLVAWFFRDYGQS+
Sbjct: 17  VHVSDRQNVPLEEVTSSLELSKVDYTKERTKSLHARYCFGIIFLIMNLVAWFFRDYGQSV 76

Query: 70  LLPWVHYIKVCGNEGEDCFHSLGVLRVSLGCHIFFLIMFLTTVNTRKLCEGRNSWHSGWW 129
           L PW+ YIKVCGNEG+DCFHS+GVLRVSLGC IFFL+MFL+TV TRKLCEGRNSWHS WW
Sbjct: 77  L-PWIRYIKVCGNEGDDCFHSMGVLRVSLGCFIFFLVMFLSTVKTRKLCEGRNSWHSRWW 135

Query: 130 ELKSILLLVSMTLPFLFPSEFVQIYGEIARIGAGIFLLLQLVSVIHFITWWNKYWTPDEE 189
           E K++LLL+SM +PF  PS+FVQIYGEIARIGAGIFLLLQLVSVIHFI WWNKYWTPDEE
Sbjct: 136 EFKAVLLLLSMAVPFFIPSQFVQIYGEIARIGAGIFLLLQLVSVIHFIIWWNKYWTPDEE 195

Query: 190 RKQRCSVGLSMSTMFYVAAICGVVYMYTSYASRSSCSLNIFFITWTAILLLVMMIISLNS 249
            K+RCS GL +ST+FY+ AICG+VYMY SYASR+SCSLNIFFI WTAILL  ++IISLNS
Sbjct: 196 TKKRCSFGLLVSTLFYIGAICGIVYMYRSYASRASCSLNIFFIAWTAILLAAILIISLNS 255

Query: 250 KVNRGLLSSGIMASYIVFLCWCAIR 274
           KV+RGLLSSGIMASYIVFLCWCAIR
Sbjct: 256 KVHRGLLSSGIMASYIVFLCWCAIR 280


>Medtr8g103740.1 | serinc-domain serine and sphingolipid
           biosynthesis protein | HC | chr8:43662753-43668956 |
           20130731
          Length = 409

 Score =  222 bits (565), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 120/232 (51%), Positives = 159/232 (68%), Gaps = 4/232 (1%)

Query: 44  ARYYFGIIFLIMNLVAWFFRDYGQSLLLPWVHYIKVCGNEGEDCFHSLGVLRVSLGCHIF 103
           ARY +  IFL+ NL+AW  RDYG+S L   +  +K C N G+DC  + GVLRVSLGC  F
Sbjct: 34  ARYAYAFIFLLANLLAWAARDYGRSALTE-MERLKGC-NGGKDCLGAEGVLRVSLGCFTF 91

Query: 104 FLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARIGAG 163
           ++IMFL+T  T KL + RN+WHSGWW +K  L +V   +PF  PS F+QIYGE+A  GAG
Sbjct: 92  YIIMFLSTTGTSKLKQKRNTWHSGWWLVKIALWIVMTVIPFFLPSGFIQIYGEVAHFGAG 151

Query: 164 IFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSM-STMFYVAAICGVVYMYTSYASR 222
           +FLL+QL+S+I FITW N +    E+   RC + + + +T  YV  + G++ MY  Y   
Sbjct: 152 VFLLIQLISIISFITWLNDH-CASEKYAARCHIHVMLFATTAYVVCLVGIILMYIWYTPE 210

Query: 223 SSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAIR 274
            SC LNIFFITWT +L+ +M  +SL+ KVN G+L+ G+M  YIVFLCWCAIR
Sbjct: 211 PSCLLNIFFITWTLVLVQLMTSVSLHPKVNAGILTPGLMGLYIVFLCWCAIR 262


>Medtr6g086060.1 | serinc-domain serine and sphingolipid
           biosynthesis protein | HC | chr6:32241660-32233745 |
           20130731
          Length = 402

 Score =  217 bits (553), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 115/237 (48%), Positives = 155/237 (65%), Gaps = 4/237 (1%)

Query: 40  KSLQARYYFGIIFLIMNLVAWFFRDYGQSL-LLPWVHYIKVCGNEGEDCFHSLGVLRVSL 98
             L ARY +G+IFL  N++AW  RD   S+  L  +   K C   G+DC  + GVLRVS+
Sbjct: 32  NPLMARYVYGLIFLAANMLAWATRDELSSISALTELKGFKAC-KVGKDCLGAHGVLRVSM 90

Query: 99  GCHIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIA 158
           GC +FF++MF +T  T KL E R+ WHSGWW  K +L ++     FL PSE + +YGE+A
Sbjct: 91  GCFLFFMMMFWSTTRTSKLNEPRDRWHSGWWATKIVLWIILTIFTFLLPSELIDLYGEVA 150

Query: 159 RIGAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSM-STMFYVAAICGVVYMYT 217
             GAG+FLL+QLVS+I FITW N  +   E+  +RC + + + +T  Y   + G++ MY 
Sbjct: 151 HFGAGVFLLIQLVSIISFITWLNDCFA-SEKYAERCQIHVMVFATGSYFICLVGIILMYI 209

Query: 218 SYASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAIR 274
            YA   SC LNIFFITWT +LL +M  +SL+ KVN G+LS G+M  Y+VFLCWCAIR
Sbjct: 210 WYAPIPSCLLNIFFITWTLVLLQIMTSVSLHPKVNGGILSPGLMGLYVVFLCWCAIR 266


>Medtr6g086060.2 | serinc-domain serine and sphingolipid
           biosynthesis protein | HC | chr6:32241680-32233809 |
           20130731
          Length = 402

 Score =  217 bits (553), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 115/237 (48%), Positives = 155/237 (65%), Gaps = 4/237 (1%)

Query: 40  KSLQARYYFGIIFLIMNLVAWFFRDYGQSL-LLPWVHYIKVCGNEGEDCFHSLGVLRVSL 98
             L ARY +G+IFL  N++AW  RD   S+  L  +   K C   G+DC  + GVLRVS+
Sbjct: 32  NPLMARYVYGLIFLAANMLAWATRDELSSISALTELKGFKAC-KVGKDCLGAHGVLRVSM 90

Query: 99  GCHIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIA 158
           GC +FF++MF +T  T KL E R+ WHSGWW  K +L ++     FL PSE + +YGE+A
Sbjct: 91  GCFLFFMMMFWSTTRTSKLNEPRDRWHSGWWATKIVLWIILTIFTFLLPSELIDLYGEVA 150

Query: 159 RIGAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSM-STMFYVAAICGVVYMYT 217
             GAG+FLL+QLVS+I FITW N  +   E+  +RC + + + +T  Y   + G++ MY 
Sbjct: 151 HFGAGVFLLIQLVSIISFITWLNDCFA-SEKYAERCQIHVMVFATGSYFICLVGIILMYI 209

Query: 218 SYASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAIR 274
            YA   SC LNIFFITWT +LL +M  +SL+ KVN G+LS G+M  Y+VFLCWCAIR
Sbjct: 210 WYAPIPSCLLNIFFITWTLVLLQIMTSVSLHPKVNGGILSPGLMGLYVVFLCWCAIR 266


>Medtr6g086060.3 | serinc-domain serine and sphingolipid
           biosynthesis protein | HC | chr6:32241660-32233745 |
           20130731
          Length = 402

 Score =  217 bits (553), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 115/237 (48%), Positives = 155/237 (65%), Gaps = 4/237 (1%)

Query: 40  KSLQARYYFGIIFLIMNLVAWFFRDYGQSL-LLPWVHYIKVCGNEGEDCFHSLGVLRVSL 98
             L ARY +G+IFL  N++AW  RD   S+  L  +   K C   G+DC  + GVLRVS+
Sbjct: 32  NPLMARYVYGLIFLAANMLAWATRDELSSISALTELKGFKAC-KVGKDCLGAHGVLRVSM 90

Query: 99  GCHIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIA 158
           GC +FF++MF +T  T KL E R+ WHSGWW  K +L ++     FL PSE + +YGE+A
Sbjct: 91  GCFLFFMMMFWSTTRTSKLNEPRDRWHSGWWATKIVLWIILTIFTFLLPSELIDLYGEVA 150

Query: 159 RIGAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSM-STMFYVAAICGVVYMYT 217
             GAG+FLL+QLVS+I FITW N  +   E+  +RC + + + +T  Y   + G++ MY 
Sbjct: 151 HFGAGVFLLIQLVSIISFITWLNDCFA-SEKYAERCQIHVMVFATGSYFICLVGIILMYI 209

Query: 218 SYASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAIR 274
            YA   SC LNIFFITWT +LL +M  +SL+ KVN G+LS G+M  Y+VFLCWCAIR
Sbjct: 210 WYAPIPSCLLNIFFITWTLVLLQIMTSVSLHPKVNGGILSPGLMGLYVVFLCWCAIR 266


>Medtr8g103740.2 | serinc-domain serine and sphingolipid
           biosynthesis protein | HC | chr8:43666047-43669926 |
           20130731
          Length = 303

 Score =  177 bits (449), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 87/169 (51%), Positives = 116/169 (68%), Gaps = 2/169 (1%)

Query: 107 MFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARIGAGIFL 166
           MFL+T  T KL + RN+WHSGWW +K  L +V   +PF  PS F+QIYGE+A  GAG+FL
Sbjct: 1   MFLSTTGTSKLKQKRNTWHSGWWLVKIALWIVMTVIPFFLPSGFIQIYGEVAHFGAGVFL 60

Query: 167 LLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSM-STMFYVAAICGVVYMYTSYASRSSC 225
           L+QL+S+I FITW N +    E+   RC + + + +T  YV  + G++ MY  Y    SC
Sbjct: 61  LIQLISIISFITWLNDH-CASEKYAARCHIHVMLFATTAYVVCLVGIILMYIWYTPEPSC 119

Query: 226 SLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAIR 274
            LNIFFITWT +L+ +M  +SL+ KVN G+L+ G+M  YIVFLCWCAIR
Sbjct: 120 LLNIFFITWTLVLVQLMTSVSLHPKVNAGILTPGLMGLYIVFLCWCAIR 168


>Medtr2g022060.1 | TMS membrane protein/tumor differentially protein
           | HC | chr2:7552461-7546938 | 20130731
          Length = 409

 Score =  114 bits (286), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 133/252 (52%), Gaps = 9/252 (3%)

Query: 26  EVTASLDDYAAERKKSLQARYYFGIIFLIMNLVAWFFRDYGQSLL--LPWVHYIKVCGNE 83
            +T  L    A       AR  +  +F    +V+W  R+ G  LL  +PW   I      
Sbjct: 10  SLTCGLCTSVASGISQKSARIGYCFLFGASLIVSWILREVGAPLLEKIPW---IDSSDTH 66

Query: 84  GEDCFHSLGVLRVSLGCHIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLP 143
            ++ +    VL VSLG  +FF+++ L  +  +   + R+SWH G W +K ++ L+ + L 
Sbjct: 67  TKEWYQVQAVLHVSLGNCLFFVVLALIMIGVKDQNDKRDSWHHGGWTVKIVIWLLLIVLA 126

Query: 144 FLFPSEFVQIYGEIARIGAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTM 203
           F  P   +  YG I++ GAG+FLL+Q++ ++     WN  W   +E+K   ++ L +S  
Sbjct: 127 FFIPDSIMLAYGFISKFGAGLFLLIQVIILLDCTHNWNDSWVEKDEQKWYIAL-LVVSIG 185

Query: 204 FYVAA--ICGVVYMYTSYASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIM 261
            Y+AA  + G+++++ +      C LN+FF++ + IL  V  +++L+ KVN  LL + ++
Sbjct: 186 CYIAAFTLSGILFIWFNPGGY-DCGLNVFFLSMSMILAFVFGVVALHPKVNGSLLPASVI 244

Query: 262 ASYIVFLCWCAI 273
           + Y  ++C+  +
Sbjct: 245 SLYCAYVCYTGL 256


>Medtr7g057720.1 | serinc-domain serine and sphingolipid
           biosynthesis protein | HC | chr7:20883294-20879112 |
           20130731
          Length = 410

 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 125/234 (53%), Gaps = 8/234 (3%)

Query: 44  ARYYFGIIFLIMNLVAWFFRDYGQSLL--LPWVHYIKVCGNEGEDCFHSLGVLRVSLGCH 101
           AR  +  +F +  +VAW  R+    L+  +PW+++ K       + F +  VLRVS G  
Sbjct: 31  ARIAYCGLFALSLVVAWMLREVAAPLMESIPWINHFK--QTPSREWFETDAVLRVSFGNF 88

Query: 102 IFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLFPSEFVQIYGEIARIG 161
           +FF I+    V  +   + R+  H G W +K I   + +   F  P+E +  Y  I++ G
Sbjct: 89  LFFTILAAMMVGVKTQKDPRDGLHHGGWMMKIICWCLLVIFMFFLPNEIISFYETISKFG 148

Query: 162 AGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTMFYVAAIC--GVVYMYTSY 219
           +G+FLL+Q+V ++ F+  WN  W   +E+    ++   +S + YVA     GV++ + + 
Sbjct: 149 SGMFLLVQVVLLLDFVHRWNDTWVGYDEQFWYIAL-FVVSLVCYVATFVFSGVLFHFFT- 206

Query: 220 ASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASYIVFLCWCAI 273
            S   C  NIFFI+ T +L  V  I++L+  VN  +L + +++ Y ++LC+ A+
Sbjct: 207 PSGQDCGTNIFFISMTLMLAFVFAIVALHPAVNGSVLPASVISFYCMYLCYSAL 260


>Medtr7g057720.2 | serinc-domain serine and sphingolipid
           biosynthesis protein | HC | chr7:20883294-20879112 |
           20130731
          Length = 427

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 126/249 (50%), Gaps = 21/249 (8%)

Query: 44  ARYYFGIIFLIMNLVAWFFRDYGQSLL--LP-----WVHYIKVCG----------NEGED 86
           AR  +  +F +  +VAW  R+    L+  +P     W+  +++ G              +
Sbjct: 31  ARIAYCGLFALSLVVAWMLREVAAPLMESIPCIGAVWIELLELIGVSSWINHFKQTPSRE 90

Query: 87  CFHSLGVLRVSLGCHIFFLIMFLTTVNTRKLCEGRNSWHSGWWELKSILLLVSMTLPFLF 146
            F +  VLRVS G  +FF I+    V  +   + R+  H G W +K I   + +   F  
Sbjct: 91  WFETDAVLRVSFGNFLFFTILAAMMVGVKTQKDPRDGLHHGGWMMKIICWCLLVIFMFFL 150

Query: 147 PSEFVQIYGEIARIGAGIFLLLQLVSVIHFITWWNKYWTPDEERKQRCSVGLSMSTMFYV 206
           P+E +  Y  I++ G+G+FLL+Q+V ++ F+  WN  W   +E+    ++   +S + YV
Sbjct: 151 PNEIISFYETISKFGSGMFLLVQVVLLLDFVHRWNDTWVGYDEQFWYIAL-FVVSLVCYV 209

Query: 207 AAIC--GVVYMYTSYASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGIMASY 264
           A     GV++ + +  S   C  NIFFI+ T +L  V  I++L+  VN  +L + +++ Y
Sbjct: 210 ATFVFSGVLFHFFT-PSGQDCGTNIFFISMTLMLAFVFAIVALHPAVNGSVLPASVISFY 268

Query: 265 IVFLCWCAI 273
            ++LC+ A+
Sbjct: 269 CMYLCYSAL 277


>Medtr8g103740.3 | serinc-domain serine and sphingolipid
           biosynthesis protein | HC | chr8:43667218-43669962 |
           20130731
          Length = 212

 Score = 85.1 bits (209), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 40/74 (54%), Positives = 52/74 (70%)

Query: 201 STMFYVAAICGVVYMYTSYASRSSCSLNIFFITWTAILLLVMMIISLNSKVNRGLLSSGI 260
           +T  YV  + G++ MY  Y    SC LNIFFITWT +L+ +M  +SL+ KVN G+L+ G+
Sbjct: 4   ATTAYVVCLVGIILMYIWYTPEPSCLLNIFFITWTLVLVQLMTSVSLHPKVNAGILTPGL 63

Query: 261 MASYIVFLCWCAIR 274
           M  YIVFLCWCAIR
Sbjct: 64  MGLYIVFLCWCAIR 77