Miyakogusa Predicted Gene
- Lj0g3v0206599.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0206599.1 Non Characterized Hit- tr|B9T3T5|B9T3T5_RICCO
Pentatricopeptide repeat-containing protein, putative
,25.42,2e-18,PPR,Pentatricopeptide repeat; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR: pentat,CUFF.13218.1
(444 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 637 0.0
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 312 4e-85
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 310 2e-84
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 309 3e-84
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 306 4e-83
Medtr4g113830.1 | organelle transcript processing protein, putat... 301 6e-82
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 301 1e-81
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 300 1e-81
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 295 5e-80
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 295 5e-80
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 295 5e-80
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 295 5e-80
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 295 5e-80
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 294 1e-79
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 292 5e-79
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 288 7e-78
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 286 3e-77
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 283 2e-76
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 283 2e-76
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 283 2e-76
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 282 4e-76
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 281 8e-76
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 281 8e-76
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 281 1e-75
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 280 2e-75
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 280 2e-75
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 280 3e-75
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 278 5e-75
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 278 1e-74
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 275 5e-74
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 275 6e-74
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 274 1e-73
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 273 2e-73
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 273 3e-73
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 272 5e-73
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 272 6e-73
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 272 6e-73
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 272 6e-73
Medtr5g006420.1 | organelle transcript processing protein, putat... 272 6e-73
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 270 2e-72
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 269 5e-72
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 266 3e-71
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 266 4e-71
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 263 2e-70
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 263 3e-70
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 263 3e-70
Medtr3g052720.1 | organelle transcript processing protein, putat... 261 8e-70
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 261 9e-70
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 258 6e-69
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 258 7e-69
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 258 1e-68
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 256 4e-68
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 254 9e-68
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 254 1e-67
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 251 7e-67
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 251 8e-67
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 251 9e-67
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 251 1e-66
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 3e-66
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 249 5e-66
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 247 1e-65
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 247 2e-65
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 247 2e-65
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 246 2e-65
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 246 2e-65
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 246 2e-65
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 246 4e-65
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 245 5e-65
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 245 8e-65
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 245 8e-65
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 244 1e-64
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 243 2e-64
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 243 2e-64
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 243 3e-64
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 243 4e-64
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 4e-64
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 242 5e-64
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 242 5e-64
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 241 9e-64
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 241 1e-63
Medtr1g059720.1 | organelle transcript processing protein, putat... 240 2e-63
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 240 2e-63
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 1e-62
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 238 1e-62
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 1e-62
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 237 2e-62
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 237 2e-62
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 236 3e-62
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 236 4e-62
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 236 4e-62
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 235 5e-62
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 235 6e-62
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 234 1e-61
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 2e-61
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 233 2e-61
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 233 3e-61
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 232 5e-61
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 232 6e-61
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 230 2e-60
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 230 2e-60
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 230 3e-60
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 229 3e-60
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 229 4e-60
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 229 5e-60
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 229 6e-60
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 228 7e-60
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 228 1e-59
Medtr3g117150.1 | organelle transcript processing protein, putat... 228 1e-59
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 227 1e-59
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 227 2e-59
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 2e-59
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 226 3e-59
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 3e-59
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 3e-59
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 226 4e-59
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 4e-59
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 226 5e-59
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 225 6e-59
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 225 6e-59
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 225 6e-59
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 225 6e-59
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 225 6e-59
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 225 7e-59
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 9e-59
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 224 1e-58
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 1e-58
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 224 1e-58
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 2e-58
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 3e-58
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 3e-58
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 3e-58
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 4e-58
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 222 5e-58
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 222 6e-58
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 221 1e-57
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 221 1e-57
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 221 2e-57
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 220 2e-57
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 220 3e-57
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 220 3e-57
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 220 3e-57
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 220 3e-57
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 220 3e-57
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 219 3e-57
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 219 4e-57
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 219 4e-57
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 219 5e-57
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 219 5e-57
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 219 5e-57
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 219 5e-57
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 218 6e-57
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 218 8e-57
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 218 1e-56
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 218 1e-56
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 218 1e-56
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 217 2e-56
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 217 2e-56
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 217 2e-56
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 217 2e-56
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 216 3e-56
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 216 4e-56
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 216 5e-56
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 215 6e-56
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 215 6e-56
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 215 6e-56
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 215 7e-56
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 215 8e-56
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 215 9e-56
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 215 9e-56
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 214 9e-56
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 214 1e-55
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 214 1e-55
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 214 2e-55
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 213 2e-55
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 213 2e-55
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 213 3e-55
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 213 3e-55
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 213 3e-55
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 212 5e-55
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 212 5e-55
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 212 5e-55
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 212 6e-55
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 212 6e-55
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 212 6e-55
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 212 6e-55
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 211 8e-55
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 211 1e-54
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 211 1e-54
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 211 1e-54
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 210 2e-54
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 209 4e-54
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 208 7e-54
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 208 9e-54
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 208 9e-54
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 207 1e-53
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 207 2e-53
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 206 5e-53
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 206 5e-53
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 205 9e-53
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 205 9e-53
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 205 9e-53
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 204 1e-52
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 204 1e-52
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 204 2e-52
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 203 3e-52
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 203 3e-52
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 202 5e-52
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 202 6e-52
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 201 9e-52
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 201 1e-51
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 200 3e-51
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 199 3e-51
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 199 5e-51
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 198 9e-51
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 198 1e-50
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 197 1e-50
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 197 2e-50
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 197 2e-50
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 197 2e-50
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 197 2e-50
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 197 2e-50
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 197 2e-50
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 197 2e-50
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 196 4e-50
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 196 6e-50
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 194 2e-49
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 193 3e-49
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 193 3e-49
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 192 4e-49
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 192 5e-49
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 192 5e-49
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 192 6e-49
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 192 8e-49
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 191 1e-48
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 189 3e-48
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 189 5e-48
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 189 6e-48
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 189 6e-48
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 188 8e-48
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 187 2e-47
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 186 4e-47
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 186 5e-47
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 186 5e-47
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 181 1e-45
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 181 2e-45
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 180 3e-45
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 180 3e-45
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 179 6e-45
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 179 6e-45
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 177 2e-44
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 177 3e-44
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 176 3e-44
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 173 3e-43
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 173 3e-43
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 172 8e-43
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 167 3e-41
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 165 9e-41
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 164 1e-40
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 164 2e-40
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 162 5e-40
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 158 1e-38
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 157 2e-38
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 157 3e-38
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 156 3e-38
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 154 2e-37
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 151 1e-36
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 151 1e-36
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 150 3e-36
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 149 5e-36
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 138 1e-32
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 132 5e-31
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 130 2e-30
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 129 5e-30
Medtr6g460480.1 | organelle transcript processing protein, putat... 127 1e-29
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 121 1e-27
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 115 9e-26
Medtr6g065190.1 | PPR repeat protein | LC | chr6:24137605-241338... 114 2e-25
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 113 3e-25
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 111 1e-24
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 111 1e-24
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 108 9e-24
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 107 3e-23
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 103 2e-22
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 102 7e-22
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 102 1e-21
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 2e-21
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 99 7e-21
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 99 9e-21
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 98 1e-20
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 97 3e-20
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 96 7e-20
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 96 7e-20
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 96 8e-20
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 96 8e-20
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:... 95 1e-19
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 95 1e-19
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 95 1e-19
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 93 4e-19
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 6e-19
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407... 92 9e-19
Medtr4g084790.1 | PPR domain protein | HC | chr4:33048235-330493... 92 9e-19
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 9e-19
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 92 1e-18
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 92 1e-18
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 2e-18
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 2e-18
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 2e-18
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 91 3e-18
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 3e-18
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 90 5e-18
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 5e-18
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 6e-18
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 6e-18
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 89 6e-18
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 89 6e-18
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 89 9e-18
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 88 1e-17
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 88 2e-17
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 88 2e-17
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 88 2e-17
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 88 2e-17
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 88 2e-17
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 87 4e-17
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 7e-17
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 1e-16
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 1e-16
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 85 1e-16
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 2e-16
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 84 2e-16
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 84 2e-16
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 84 3e-16
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 84 3e-16
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 4e-16
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 83 5e-16
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 83 5e-16
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 6e-16
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 83 6e-16
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 82 7e-16
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 82 9e-16
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 1e-15
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:... 82 2e-15
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 2e-15
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 81 2e-15
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 81 2e-15
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 2e-15
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 81 2e-15
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 2e-15
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 81 2e-15
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 80 3e-15
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 80 3e-15
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 80 3e-15
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 80 4e-15
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 80 5e-15
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 5e-15
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 5e-15
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311... 80 5e-15
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 80 6e-15
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 80 6e-15
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 7e-15
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 8e-15
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 79 8e-15
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 79 9e-15
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 79 9e-15
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 79 9e-15
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 79 1e-14
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 1e-14
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 79 1e-14
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 1e-14
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 78 2e-14
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 78 2e-14
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 77 3e-14
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 3e-14
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 77 3e-14
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 3e-14
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 4e-14
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 77 4e-14
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 5e-14
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 76 5e-14
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 76 5e-14
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 6e-14
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 76 7e-14
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 75 9e-14
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 75 9e-14
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 75 1e-13
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 75 1e-13
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 75 1e-13
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 75 1e-13
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 75 1e-13
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 1e-13
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 75 2e-13
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 2e-13
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 2e-13
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 74 2e-13
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 3e-13
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 4e-13
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 74 4e-13
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 73 5e-13
Medtr7g095380.1 | PPR repeat protein | HC | chr7:38183678-381831... 73 5e-13
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 73 5e-13
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 73 6e-13
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 6e-13
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 73 6e-13
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 73 6e-13
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 73 6e-13
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 73 6e-13
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 73 6e-13
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 72 9e-13
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 72 1e-12
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 72 1e-12
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 1e-12
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 1e-12
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 72 1e-12
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 72 1e-12
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 72 1e-12
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 71 2e-12
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 71 2e-12
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 71 2e-12
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 3e-12
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 71 3e-12
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 3e-12
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:... 70 3e-12
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:... 70 3e-12
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 3e-12
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 70 4e-12
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 70 4e-12
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 70 5e-12
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 70 5e-12
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 70 5e-12
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 70 6e-12
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 69 9e-12
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 1e-11
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 1e-11
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 69 1e-11
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 1e-11
Medtr3g007795.1 | PPR containing plant-like protein | HC | chr3:... 69 1e-11
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 1e-11
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 68 1e-11
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 68 2e-11
Medtr2g060630.1 | PPR containing plant-like protein | HC | chr2:... 68 2e-11
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 68 2e-11
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 68 2e-11
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:... 68 2e-11
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 68 2e-11
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 68 2e-11
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 67 2e-11
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 67 3e-11
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 3e-11
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 3e-11
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 67 4e-11
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 4e-11
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 67 4e-11
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 5e-11
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 66 7e-11
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 66 7e-11
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 66 7e-11
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 66 8e-11
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:... 66 9e-11
Medtr1g066900.1 | PPR containing plant-like protein | HC | chr1:... 65 1e-10
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 65 1e-10
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 65 1e-10
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 65 1e-10
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 65 1e-10
Medtr7g056613.1 | PPR containing plant-like protein | HC | chr7:... 65 1e-10
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 2e-10
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 64 2e-10
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 64 2e-10
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 64 2e-10
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 64 2e-10
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 64 2e-10
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 64 2e-10
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 64 3e-10
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 64 3e-10
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 64 3e-10
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 4e-10
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 4e-10
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 64 4e-10
Medtr5g025930.1 | LRR receptor-like kinase | LC | chr5:10602452-... 64 4e-10
Medtr2g100200.2 | PPR containing plant-like protein | HC | chr2:... 63 5e-10
Medtr2g100200.1 | PPR containing plant-like protein | HC | chr2:... 63 5e-10
Medtr5g043790.1 | PPR repeat protein | LC | chr5:19242401-192435... 63 5e-10
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 6e-10
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 6e-10
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 6e-10
Medtr2g007030.1 | PPR containing plant-like protein | HC | chr2:... 63 6e-10
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 63 7e-10
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 63 7e-10
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 62 8e-10
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 62 9e-10
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 62 1e-09
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 62 1e-09
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 61 3e-09
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 3e-09
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 60 3e-09
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 60 3e-09
Medtr7g058380.1 | PPR repeat protein | HC | chr7:21009807-210090... 60 4e-09
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 637 bits (1642), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/405 (76%), Positives = 348/405 (85%), Gaps = 4/405 (0%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYSVFGR+ DARL+F S LDLVSYN+MIDG+VKNG ARKLFDEM RDV++WNCM
Sbjct: 164 MYSVFGRIDDARLIFYESYVLDLVSYNTMIDGYVKNGGIRDARKLFDEMYERDVFSWNCM 223
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA---RNVV 117
IAGYV+VGDL AA ELFE MP++DVVSWNCMIDGCVRVGNV LALEFFN+M RNVV
Sbjct: 224 IAGYVSVGDLAAAKELFEAMPNKDVVSWNCMIDGCVRVGNVSLALEFFNQMDGVVVRNVV 283
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SWNS+LALHVR K++ ECL+MF+ MMESGEA+PNEATLVSVLTACA+LGKL++G+WVHS+
Sbjct: 284 SWNSLLALHVRMKNYGECLRMFERMMESGEAMPNEATLVSVLTACANLGKLNLGLWVHSY 343
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
IKSN IK+DVLL TCLLTMY KCGAMDLA DVF EMPV+++VSWNSMIMGYGLHGNG+KA
Sbjct: 344 IKSNEIKLDVLLETCLLTMYAKCGAMDLASDVFVEMPVKSIVSWNSMIMGYGLHGNGDKA 403
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
LE+F EMEK G KPN+ATF+CVLSAC+HAGMVMEGWWYFDLMRRVY IEPKVEHYGC+VD
Sbjct: 404 LEMFAEMEKAGQKPNEATFICVLSACSHAGMVMEGWWYFDLMRRVYKIEPKVEHYGCMVD 463
Query: 298 LLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIG 357
LLARAG VKNSEELI+ VSVK C TH+D EL E VAKRL+ELEP DI
Sbjct: 464 LLARAGFVKNSEELIEKVSVK-GGSAMWGALLSGCRTHLDLELAENVAKRLVELEPQDIS 522
Query: 358 PYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFE 402
PYI+LS+ YAAQGRWDDVERVR+ ++ GLQKEAASS+VHLEDFE
Sbjct: 523 PYILLSDVYAAQGRWDDVERVRLAMKINGLQKEAASSLVHLEDFE 567
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 9/213 (4%)
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
P + FF+ + + N+++ ++R+ + + M + PN T +L
Sbjct: 68 TTPSSALFFDHLHHPDAFLCNTIIRSYLRSSNPSAAFHFYYHRMIAKSVPPNHYTFPLIL 127
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
C G G H+ + D+ + L+ MY G +D AR +F E V ++V
Sbjct: 128 KLCVDHGCKLEGEKGHARVVKFGFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLV 187
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
S+N+MI GY +G A +LF EM ++ + ++ C+++ G + F+ M
Sbjct: 188 SYNTMIDGYVKNGGIRDARKLFDEMYER----DVFSWNCMIAGYVSVGDLAAAKELFEAM 243
Query: 280 RRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
V + C++D R G V + E
Sbjct: 244 P-----NKDVVSWNCMIDGCVRVGNVSLALEFF 271
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 249/383 (65%), Gaps = 5/383 (1%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G + DAR +FD ++VS+ +M+ G+V G+ A+K+FDEMP+R+V +WN M
Sbjct: 159 MYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEMPLRNVASWNAM 218
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN 120
I G+V VGDL +A +F+ MP+++VVS+ MIDG + G++ + F + ++VV+W+
Sbjct: 219 IRGFVKVGDLSSARGVFDSMPEKNVVSFTTMIDGYAKAGDMESSRFLFEQAAEKDVVAWS 278
Query: 121 SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS 180
++++ +V+ E LK+F EM ES + +P+E LVS+++A + LG L + V S++ +
Sbjct: 279 ALISGYVQNGEANEALKVFLEM-ESMKVIPDEFVLVSLMSAASQLGDLKLAQRVDSYVDN 337
Query: 181 NNIKV--DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
++I + D ++S L+ M KCG M+ A +F EMP R++VS+ SMI G+ +HG+GE A+
Sbjct: 338 SSIDLQQDYVISA-LVDMNAKCGNMERALKLFREMPKRDLVSYCSMIHGFSIHGHGEDAV 396
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDL 298
LF M +G P++A F VL+AC+H+G+V +GW YF+ M Y I P +H+ C+VDL
Sbjct: 397 NLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKGWKYFNSMEENYGISPTPDHFACMVDL 456
Query: 299 LARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGP 358
L R+G ++++ ELIK + ++ C H D+ELGEIVA RL ELEP +
Sbjct: 457 LGRSGQLRDAYELIKSMHIE-PNAGAWGALIGACKLHGDTELGEIVANRLFELEPQNAAN 515
Query: 359 YIMLSNTYAAQGRWDDVERVRVM 381
Y++LSN YAA GRW DV VR++
Sbjct: 516 YVLLSNIYAAAGRWKDVSLVRIL 538
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 10/237 (4%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D+ ++S + + + + + FNR+ + WN+ + H ++ F + + F
Sbjct: 46 DQFLISNFISLANTLSISTLSYSTAVFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIR 105
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M G AVP+ T SV+ AC+ K+ VG VH + + D+ + T L+ MY KCG
Sbjct: 106 MKAEG-AVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQDLFVGTTLVDMYGKCG 164
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+ AR VFDE+ RNVVSW +M++GY G+ +A ++F EM P N A++ ++
Sbjct: 165 EIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEM----PLRNVASWNAMIR 220
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
G + FD M E V + ++D A+AG +++S L + + K
Sbjct: 221 GFVKVGDLSSARGVFDSMP-----EKNVVSFTTMIDGYAKAGDMESSRFLFEQAAEK 272
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 40/216 (18%)
Query: 52 RDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
+D++ ++ Y G++ A ++F+ + DR+VVSW M+ G V G+V A + F+ M
Sbjct: 148 QDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEM 207
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
P RNV SWN+M+ V+ +FD M E
Sbjct: 208 PLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEK-------------------------- 241
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
+V+ T ++ Y K G M+ +R +F++ ++VV+W+++I GY +
Sbjct: 242 --------------NVVSFTTMIDGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQN 287
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
G +AL++FLEME P++ V ++SA + G
Sbjct: 288 GEANEALKVFLEMESMKVIPDEFVLVSLMSAASQLG 323
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 255/425 (60%), Gaps = 1/425 (0%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS G V DA +F ++V + ++I+G++ G+ + R+LFD P RDV W+ +
Sbjct: 154 MYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVL 213
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN 120
I+GY+ ++ AA ELF++MP+RD +SWN M++G G V + + F+ MP RNV SWN
Sbjct: 214 ISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWN 273
Query: 121 SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS 180
++ +V+ F E L+ F M+ G +PN+ TLV+VL+AC+ LG L +G WVH + +S
Sbjct: 274 GLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAES 333
Query: 181 NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALEL 240
K ++ + L+ MY KCG ++ A VF+ + ++++SWN++I G +HG+ AL +
Sbjct: 334 IGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGM 393
Query: 241 FLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLA 300
F M+ +G +P+ TFV +LSACTH G+V +G+ YF M Y+I P++EHYGC+VDLL
Sbjct: 394 FDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLG 453
Query: 301 RAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYI 360
RAGL+ + I+ + ++ C + + E+ E+ +RLIELEP + ++
Sbjct: 454 RAGLLDQALNFIRKMPIE-PDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNPANFV 512
Query: 361 MLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYS 420
M+SN Y GR +DV R+++ +R+ G +K SV+ D +++ + +Y
Sbjct: 513 MVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIYR 572
Query: 421 MLSEL 425
+L L
Sbjct: 573 VLKGL 577
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
D V+ N I C R + A + F+++P N +WN+M +++ + + +F E+
Sbjct: 44 DFVAPN-FITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELN 102
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
+PN T ++ +C L + G VH + K + ++T L+ MY K G +
Sbjct: 103 RIA-GMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCV 161
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
+ A VF EM RNVV W ++I GY L G+ LF
Sbjct: 162 EDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLF 199
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 152 EATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD 211
E +++L +C + +L + + I ++ ++ + ++ +T + + AR +FD
Sbjct: 12 EEKFITLLRSCKNYERLH---QIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFD 68
Query: 212 EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
++P N +WN+M GY +G+ + LF E+ + PN TF ++ +C V E
Sbjct: 69 KIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVRE 128
Query: 272 G 272
G
Sbjct: 129 G 129
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 251/424 (59%), Gaps = 2/424 (0%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ G +S AR LFD S T D+ ++ +M+ G+V+NG A+ FDEMP ++ ++N MI
Sbjct: 245 YAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMI 304
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
AGYV ++ A ELFE MP R++ SWN MI G ++G++ A +FF+ MP R+ VSW +
Sbjct: 305 AGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAA 364
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
++A + ++ + E L MF E+ + GE++ N AT L+ CA + L +G +H
Sbjct: 365 IIAGYAQSGHYEEALNMFVEIKQDGESL-NRATFGCALSTCADIAALELGKQIHGQAVKM 423
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
+ LL MY KCG++D A D F+ + ++VVSWN+M+ GY HG G +AL +F
Sbjct: 424 GYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVF 483
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
M+ G KP++ T V VLSAC+H G++ G YF M + Y + P +HY C++DLL R
Sbjct: 484 ESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGR 543
Query: 302 AGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIM 361
AG ++ +++LI+ + + H ++ELGE A+ + ++EP + G Y++
Sbjct: 544 AGRLEEAQDLIRNMPFQPGAASWGALLGAS-RIHGNTELGEKAAEMVFKMEPQNSGMYVL 602
Query: 362 LSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSM 421
LSN YAA GRW D +++R +R+ G+QK S V +++ + V + S K +Y+
Sbjct: 603 LSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAY 662
Query: 422 LSEL 425
L EL
Sbjct: 663 LEEL 666
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 142/289 (49%), Gaps = 40/289 (13%)
Query: 7 RVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV--WN-------- 56
R+ DAR LFD D+VS+NS++ G+ +NG AR++FD MP ++ WN
Sbjct: 126 RLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVH 185
Query: 57 ---------------------WNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGC 95
WNC++ G+V L A LF++MP RD +SWN MI G
Sbjct: 186 NGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGY 245
Query: 96 VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
+ G + A F+ P R+V +W +M++ +V+ E FDEM E NE +
Sbjct: 246 AQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK-----NEVSY 300
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
+++ K+ + + + NI ++T Y + G + AR FD MP
Sbjct: 301 NAMIAGYVQTKKMDIARELFESMPCRNISS----WNTMITGYGQIGDIAQARKFFDMMPQ 356
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
R+ VSW ++I GY G+ E+AL +F+E+++ G N ATF C LS C
Sbjct: 357 RDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCA 405
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 135/258 (52%), Gaps = 13/258 (5%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D++ +N I H++NG +A +F+ MP R ++N MI+GY+ A LF++MP
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+RD+ SWN M+ G VR + A F+ MP ++VVSWNS+L+ + + E ++FD
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M E N + +L A H G++ + + D++ CL+ +V+
Sbjct: 168 MPEK-----NSISWNGLLAAYVHNGRIEEA----CLLFESKSDWDLISWNCLMGGFVRKK 218
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+ AR +FD+MPVR+ +SWN+MI GY G +A LF E P + T+ ++S
Sbjct: 219 KLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDE----SPTRDVFTWTAMVS 274
Query: 262 ACTHAGMVMEGWWYFDLM 279
GM+ E +FD M
Sbjct: 275 GYVQNGMLDEAKTFFDEM 292
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 44/238 (18%)
Query: 40 GAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVG 99
G ++++ + VR V N N R+ D D++ WN I +R G
Sbjct: 4 GIMLRIYNNLRVRRVCTINFGHTSTSTRRSESVTNNNKPRVKDPDILKWNKAISTHMRNG 63
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
+ AL FN MP R+ VS+N+M++ ++R F +FD+M E
Sbjct: 64 HCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPER-------------- 109
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
D+ +LT YV+ + AR +FD MP ++VV
Sbjct: 110 --------------------------DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
SWNS++ GY +G ++A E+F M P+ N ++ +L+A H G + E F+
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNM----PEKNSISWNGLLAAYVHNGRIEEACLLFE 197
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/382 (40%), Positives = 246/382 (64%), Gaps = 5/382 (1%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G++SDAR +F+ ++VS+ +M+ G+V G+ A+K+FD MP+R+V +WN M
Sbjct: 159 MYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVFDGMPLRNVASWNAM 218
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN 120
I G+V VGDL +A +F+ MP+++VVS+ M+DG + G++ + F + ++VV+W+
Sbjct: 219 IRGFVKVGDLSSARGVFDSMPEKNVVSFTTMVDGYAKAGDMESSRFLFEQAAEKDVVTWS 278
Query: 121 SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS 180
++++ +V+ E LK+F EM ES +P+E LV +++A + LG L + V S++ +
Sbjct: 279 ALISGYVQNGEANEALKVFLEM-ESMNVIPDEFVLVGLMSAASQLGDLKLAQRVDSYVGN 337
Query: 181 NNIKV--DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
N+I + D ++S L+ M KCG M+ A +F EMP R++VS+ SMI G+ +HG+GE A+
Sbjct: 338 NSIDLQKDHVISA-LVDMNAKCGNMERALKLFQEMPERDLVSYCSMIHGFSIHGHGEDAV 396
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDL 298
LF M +G P++A F VL+AC+H+G++ +GW YF+ M Y I P +H+ C+VDL
Sbjct: 397 NLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKGWKYFNSMEENYGISPTPDHFACMVDL 456
Query: 299 LARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGP 358
L R+G ++++ ELIK + ++ C D+ELGEIVA RL ELEP +
Sbjct: 457 LGRSGQLRDAYELIKSMHIE-PNAGAWGALIGACKLQGDTELGEIVANRLFELEPQNAAN 515
Query: 359 YIMLSNTYAAQGRWDDVERVRV 380
Y++LSN YAA GRW DV VR+
Sbjct: 516 YVLLSNIYAAAGRWKDVSLVRI 537
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
FNR+ + WN+ + H ++ F + + F M G AVP+ T SV+ AC+ K
Sbjct: 72 FNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEG-AVPDSYTYPSVIKACSGTCK 130
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+ VG VH + + D+ + T L+ MY KCG + AR VF+E+ RNVVSW +M++G
Sbjct: 131 VLVGKSVHGSVFRCGLDQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVG 190
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y G+ KA ++F M P N A++ ++ G + FD M E
Sbjct: 191 YVTAGDVVKAKKVFDGM----PLRNVASWNAMIRGFVKVGDLSSARGVFDSMP-----EK 241
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
V + +VD A+AG +++S L + + K
Sbjct: 242 NVVSFTTMVDGYAKAGDMESSRFLFEQAAEK 272
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 9/186 (4%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D+D+ +ID + G + A + FN + RNVVSW +M+ +V A + K+FD
Sbjct: 147 DQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVFD- 205
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
G + N A+ +++ +G LS V + N V+ T ++ Y K G
Sbjct: 206 ----GMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKN----VVSFTTMVDGYAKAG 257
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
M+ +R +F++ ++VV+W+++I GY +G +AL++FLEME P++ V ++S
Sbjct: 258 DMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMS 317
Query: 262 ACTHAG 267
A + G
Sbjct: 318 AASQLG 323
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 173/466 (37%), Positives = 255/466 (54%), Gaps = 43/466 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G + ARL+FD S D VS+ ++I G+V G AR+LFDE+PV+DV +WN M
Sbjct: 175 MYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAM 234
Query: 61 IAGYVAVGDLEAANELFERMPDRDVV--------------------------SW------ 88
I+GYV G E A F M + +V+ SW
Sbjct: 235 ISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGF 294
Query: 89 -------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
N +ID + G +A E F+ + ++V+SWN+M+ + + E L +F+
Sbjct: 295 GSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEV 354
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKC 200
M+ S PN+ T + +L ACA LG L +G WVH++I N + L T L+ MY KC
Sbjct: 355 MLRS-NVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKC 413
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATFVCV 259
G ++ A VF M RN+ SWN+M+ G+ +HG+ E+AL LF EM KG +P+D TFV V
Sbjct: 414 GCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGV 473
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKX 319
LSACT AG+V G YF M + Y I PK++HYGC++DLLARA + +E L+K + ++
Sbjct: 474 LSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEME- 532
Query: 320 XXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVR 379
C H E GE VA+RL +LEP + G +++LSN YA GRWDDV R+R
Sbjct: 533 PDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIR 592
Query: 380 VMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
+ +KG++K + + ++ ++ V + +Y ML+E+
Sbjct: 593 TRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEV 638
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 148/288 (51%), Gaps = 32/288 (11%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV 85
+ S+I + GE AR +FD+ +RD ++ +I GYV+ G L+ A LF+ +P +DV
Sbjct: 169 HTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDV 228
Query: 86 VSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
VSWN MI G V+ G F E + F EM E+
Sbjct: 229 VSWNAMISGYVQSGR-------------------------------FEEAIVCFYEMQEA 257
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
+PN++T+V VL+AC H +G W+ S+++ N ++ L+ L+ MY KCG D+
Sbjct: 258 -NVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDI 316
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
AR++FD + ++V+SWN+MI GY E+AL LF M + KPND TF+ +L AC
Sbjct: 317 ARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACAC 376
Query: 266 AGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
G + G W + + + ++D+ A+ G ++ +E + +
Sbjct: 377 LGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFR 424
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 103/254 (40%), Gaps = 36/254 (14%)
Query: 99 GNVPLALEFF---NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
G++ AL F + NV WNS++ + + S L +F M+ G PN T
Sbjct: 76 GDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYG-VQPNSHTF 134
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV------ 209
+ +C G +H+ + + + T ++ MY G MD AR V
Sbjct: 135 PFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSL 194
Query: 210 -------------------------FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
FDE+PV++VVSWN+MI GY G E+A+ F EM
Sbjct: 195 RDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEM 254
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
++ PN +T V VLSAC H G W +R ++ ++D+ + G
Sbjct: 255 QEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRD-NGFGSNLQLTNALIDMYCKCGE 313
Query: 305 VKNSEELIKYVSVK 318
+ EL + K
Sbjct: 314 TDIARELFDGIEEK 327
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/425 (37%), Positives = 253/425 (59%), Gaps = 3/425 (0%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y G V A +F D+VS+NSM+ G VKNG+ A K+FDEMP RD +WN M+
Sbjct: 169 YCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTML 228
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
G+ G+++ A +LFERM +RD+VSW+ M+ G + G++ +A F+R P +N+V W +
Sbjct: 229 DGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTT 288
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
+++ + E + + DEM +SG + ++ +S+L ACA G L +G +H +
Sbjct: 289 IISGYAEKGQVKEAMNLCDEMEKSGLRL-DDGFFISILAACAESGMLGLGKKMHDSFLRS 347
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGNGEKALEL 240
+ + + MY KCG +D A VF+ M +++VSWNSMI G+G+HG+GEK++EL
Sbjct: 348 RFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIEL 407
Query: 241 FLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLA 300
F M ++G KP+ TF+ +L ACTHAG+V EG YF M+RVY I P++EHYGC+VDLL
Sbjct: 408 FNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLG 467
Query: 301 RAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYI 360
R G +K + L++ + + C H D +L V+K L +L P D G +
Sbjct: 468 RGGHLKEAFWLVRSMPFE-PNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPSDPGNFS 526
Query: 361 MLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYS 420
+LSN YA G W +V +VR + ++G QK + S + +E+ ++ V+++S + +Y+
Sbjct: 527 LLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPKSGDIYN 586
Query: 421 MLSEL 425
M+ L
Sbjct: 587 MIDRL 591
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
+IA Y +L +A +F ++PD +V +N +I GN + ++ ++
Sbjct: 60 LIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGN-----------ESNSLCAF 108
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK-LSVGMWVHSFI 178
+L +HV + + T +L C LS+ VH+ +
Sbjct: 109 GVLLKMHVDG------------------VLADNFTYPFLLKGCNGSSSWLSLVKMVHAHV 150
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+ D+ + L+ Y +CG +++A VF M R+VVSWNSM+ G +G+ + AL
Sbjct: 151 EKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGAL 210
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
++F EM P+ + ++ +L T AG + + + F+ M
Sbjct: 211 KVFDEM----PERDRVSWNTMLDGFTKAGEMDKAFKLFERM 247
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 260/469 (55%), Gaps = 41/469 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWN 56
+Y G ++ AR +FD LVS+NSMI+G+ K G + A +F EM DV+
Sbjct: 178 IYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFT 237
Query: 57 W-----------------------------------NCMIAGYVAVGDLEAANELFERMP 81
N ++ Y G+L+ A +F++M
Sbjct: 238 LVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQML 297
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D+DVVSW CMI+ G + ALEFFN+MP +NVVSWNS++ HV+ + E + +F
Sbjct: 298 DKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYR 357
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M +SG + N+ TLV++L++C+H+G L++G HS+I NNI + L ++ MY KCG
Sbjct: 358 MCDSG-VMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCG 416
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
A+ A DVF MP +N VSWN +I LHG G++A+E+F +M+ G P++ TF +LS
Sbjct: 417 ALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLS 476
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC+H+G+V G YF++M + I P VEHY C+VDLL R GL+ + LIK + VK
Sbjct: 477 ACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVK-PD 535
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
C T+ + +G+ + K+L+EL + G Y++LSN Y+ RWDD++ + +
Sbjct: 536 VVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKI 595
Query: 382 IREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
+ + G++K A S + ++ ++ V + +YSML +L H+K
Sbjct: 596 LDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGASTSIYSMLGQLMDHLK 644
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 154/367 (41%), Gaps = 80/367 (21%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
L +++ ++ V+ + A KLFD++P + + +N +I GY D + L+
Sbjct: 64 LATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYR 123
Query: 79 RM------PDRDVVSW---------------------------------NCMIDGCVRVG 99
RM P++ + + N +++ V G
Sbjct: 124 RMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACG 183
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
+ A F+ + R +VSWNSM+ + + E + MF EM E G P+ TLV +L
Sbjct: 184 LITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLE-PDVFTLVGLL 242
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
+ G +G +VH + I++D +++ L+ MY KCG + A+ VFD+M ++VV
Sbjct: 243 SVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVV 302
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKK-------------------------------G 248
SW MI Y HG + ALE F +M K G
Sbjct: 303 SWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSG 362
Query: 249 PKPNDATFVCVLSACTHAGMVMEG----WWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
ND T V +LS+C+H G + G + FD NI I+D+ A+ G
Sbjct: 363 VMANDTTLVAILSSCSHMGDLALGKQAHSYIFD-----NNITLSATLCNAIIDMYAKCGA 417
Query: 305 VKNSEEL 311
++ + ++
Sbjct: 418 LQTAMDV 424
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 158/406 (38%), Positives = 241/406 (59%), Gaps = 17/406 (4%)
Query: 2 YSVFGRVSDARLLFDS-------------SLTLDLVSYNSMIDGHVKNGETGAARKLFDE 48
Y G V +AR +FD L ++VS+NSM+ +VK G+ +AR+LFD
Sbjct: 169 YGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDR 228
Query: 49 MPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
M RD +WN +I GYV +GD+E A++LF MP DV+SWN +I G ++G++ EFF
Sbjct: 229 MVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFF 288
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
MP +N++SWNS++A + + + + +++F +M GE P+ TL S+L+ L L
Sbjct: 289 ENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGER-PDRHTLSSILSVSTGLVDL 347
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMG 227
+G +H F+ + + D+ ++ L+TMY +CG + AR VF+EM + ++V++WN+MI G
Sbjct: 348 YLGKQIHQFV-TKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGG 406
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y HG +ALELF M+ +P TF+ VL+AC HAG+V EG F+ M Y IEP
Sbjct: 407 YAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEP 466
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+VEH+ +VD+L R G ++ + +LI + VK C H + +L ++ AK
Sbjct: 467 RVEHFASLVDILGRQGQLQEAMDLIVNMPVK-PDKAVWGALLGACRVHSNVDLAQVAAKA 525
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAAS 393
LI LEP PY +L N YA G+WDD ERVR ++ E ++K+A S
Sbjct: 526 LIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGS 571
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 145/285 (50%), Gaps = 17/285 (5%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVK---NGETGAARKLFDEMPVRDVWNWNCMIAGY 64
++ AR LFD D+VS+N +I G+ + RKLFD MP RD +WN +I+GY
Sbjct: 11 IAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGY 70
Query: 65 VAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA 124
G ++ A E+FE MP+R+VVS N +++G + G+V A+ FF +M R+ S + +++
Sbjct: 71 AKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVS 130
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC-AHLGKLSVGMWVHSFIKSNN- 182
VR ++ E G+ + + L A G + V + S+
Sbjct: 131 GLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQG 190
Query: 183 --------IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
+K +V+ ++ YVK G + AR++FD M R+ SWN++I GY G+
Sbjct: 191 EGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDM 250
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
E+A +LFLEM P P+ ++ ++S + G + +F+ M
Sbjct: 251 EEASKLFLEM----PIPDVLSWNSIISGFSQIGDLKRVKEFFENM 291
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 158/407 (38%), Positives = 241/407 (59%), Gaps = 17/407 (4%)
Query: 2 YSVFGRVSDARLLFDS-------------SLTLDLVSYNSMIDGHVKNGETGAARKLFDE 48
Y G V +AR +FD L ++VS+NSM+ +VK G+ +AR+LFD
Sbjct: 243 YGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDR 302
Query: 49 MPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
M RD +WN +I GYV +GD+E A++LF MP DV+SWN +I G ++G++ EFF
Sbjct: 303 MVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFF 362
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
MP +N++SWNS++A + + + + +++F +M GE P+ TL S+L+ L L
Sbjct: 363 ENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGER-PDRHTLSSILSVSTGLVDL 421
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMG 227
+G +H F+ + + D+ ++ L+TMY +CG + AR VF+EM + ++V++WN+MI G
Sbjct: 422 YLGKQIHQFV-TKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGG 480
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y HG +ALELF M+ +P TF+ VL+AC HAG+V EG F+ M Y IEP
Sbjct: 481 YAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEP 540
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+VEH+ +VD+L R G ++ + +LI + VK C H + +L ++ AK
Sbjct: 541 RVEHFASLVDILGRQGQLQEAMDLIVNMPVK-PDKAVWGALLGACRVHSNVDLAQVAAKA 599
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
LI LEP PY +L N YA G+WDD ERVR ++ E ++K+A S
Sbjct: 600 LIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYS 646
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 58/311 (18%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
GR++ AR LFDS+ + V++NSMI G+V+ E AR+LFDEMP+RD+ +WN +I+GY
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 66 AVGD---LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
+ +E +LF+ MP RD VSWN +I G + G + A+E F MP RNVVS N++
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAV 171
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-------- 174
+ + + F +M E + A+L +++ GKL + +
Sbjct: 172 VNGFLLNGDVDSAVGFFRKMGER-----DSASLSGLVSGLVRNGKLDMAAEILVEYGNEG 226
Query: 175 ---------------------------HSF--IKSNN---------IKVDVLLSTCLLTM 196
H F + S+ +K +V+ ++
Sbjct: 227 DEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMC 286
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
YVK G + AR++FD M R+ SWN++I GY G+ E+A +LFLEM P P+ ++
Sbjct: 287 YVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEM----PIPDVLSW 342
Query: 257 VCVLSACTHAG 267
++S + G
Sbjct: 343 NSIISGFSQIG 353
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 32/284 (11%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ GR+ A +F+S ++VS N++++G + NG+ +A F +M RD + + ++
Sbjct: 144 YAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLV 203
Query: 62 AGYVAVGDLEAANELFERM------PDRDVVSWNCMIDGCVRVGNVPLALEFFN------ 109
+G V G L+ A E+ D V ++N +I G + G V A F+
Sbjct: 204 SGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQ 263
Query: 110 -------RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
R RNVVSWNSM+ +V+A ++FD M+E N +V+
Sbjct: 264 GEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWN-----TVIGGY 318
Query: 163 AHLGKL--SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
+G + + +++ I DVL +++ + + G + ++ F+ MP +N++S
Sbjct: 319 VQIGDMEEASKLFLEMPIP------DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLIS 372
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
WNS+I GY + + + A+ELF +M+ KG +P+ T +LS T
Sbjct: 373 WNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVST 416
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 44/207 (21%)
Query: 44 KLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPL 103
K D +P + ++ N I+ + G L AA LF+ R+ V+WN MI G V+ +
Sbjct: 29 KTNDTIP-QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAK 87
Query: 104 ALEFFNRMPARNVVSWNSMLA--LHVRAKSF-WECLKMFDEMMESGEAVPNEATLVSVLT 160
A + F+ MP R++VSWN +++ R F E K+FD M +
Sbjct: 88 ARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQR--------------- 132
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
D + +++ Y K G MD A ++F+ MP RNVVS
Sbjct: 133 -------------------------DCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVS 167
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKK 247
N+++ G+ L+G+ + A+ F +M ++
Sbjct: 168 CNAVVNGFLLNGDVDSAVGFFRKMGER 194
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 158/407 (38%), Positives = 241/407 (59%), Gaps = 17/407 (4%)
Query: 2 YSVFGRVSDARLLFDS-------------SLTLDLVSYNSMIDGHVKNGETGAARKLFDE 48
Y G V +AR +FD L ++VS+NSM+ +VK G+ +AR+LFD
Sbjct: 243 YGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDR 302
Query: 49 MPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
M RD +WN +I GYV +GD+E A++LF MP DV+SWN +I G ++G++ EFF
Sbjct: 303 MVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFF 362
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
MP +N++SWNS++A + + + + +++F +M GE P+ TL S+L+ L L
Sbjct: 363 ENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGER-PDRHTLSSILSVSTGLVDL 421
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMG 227
+G +H F+ + + D+ ++ L+TMY +CG + AR VF+EM + ++V++WN+MI G
Sbjct: 422 YLGKQIHQFV-TKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGG 480
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y HG +ALELF M+ +P TF+ VL+AC HAG+V EG F+ M Y IEP
Sbjct: 481 YAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEP 540
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+VEH+ +VD+L R G ++ + +LI + VK C H + +L ++ AK
Sbjct: 541 RVEHFASLVDILGRQGQLQEAMDLIVNMPVK-PDKAVWGALLGACRVHSNVDLAQVAAKA 599
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
LI LEP PY +L N YA G+WDD ERVR ++ E ++K+A S
Sbjct: 600 LIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYS 646
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 58/311 (18%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
GR++ AR LFDS+ + V++NSMI G+V+ E AR+LFDEMP+RD+ +WN +I+GY
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 66 AVGD---LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
+ +E +LF+ MP RD VSWN +I G + G + A+E F MP RNVVS N++
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAV 171
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-------- 174
+ + + F +M E + A+L +++ GKL + +
Sbjct: 172 VNGFLLNGDVDSAVGFFRKMGER-----DSASLSGLVSGLVRNGKLDMAAEILVEYGNEG 226
Query: 175 ---------------------------HSF--IKSNN---------IKVDVLLSTCLLTM 196
H F + S+ +K +V+ ++
Sbjct: 227 DEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMC 286
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
YVK G + AR++FD M R+ SWN++I GY G+ E+A +LFLEM P P+ ++
Sbjct: 287 YVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEM----PIPDVLSW 342
Query: 257 VCVLSACTHAG 267
++S + G
Sbjct: 343 NSIISGFSQIG 353
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 32/284 (11%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ GR+ A +F+S ++VS N++++G + NG+ +A F +M RD + + ++
Sbjct: 144 YAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLV 203
Query: 62 AGYVAVGDLEAANELFERM------PDRDVVSWNCMIDGCVRVGNVPLALEFFN------ 109
+G V G L+ A E+ D V ++N +I G + G V A F+
Sbjct: 204 SGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQ 263
Query: 110 -------RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
R RNVVSWNSM+ +V+A ++FD M+E N +V+
Sbjct: 264 GEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWN-----TVIGGY 318
Query: 163 AHLGKL--SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
+G + + +++ I DVL +++ + + G + ++ F+ MP +N++S
Sbjct: 319 VQIGDMEEASKLFLEMPIP------DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLIS 372
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
WNS+I GY + + + A+ELF +M+ KG +P+ T +LS T
Sbjct: 373 WNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVST 416
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 44/207 (21%)
Query: 44 KLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPL 103
K D +P + ++ N I+ + G L AA LF+ R+ V+WN MI G V+ +
Sbjct: 29 KTNDTIP-QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAK 87
Query: 104 ALEFFNRMPARNVVSWNSMLA--LHVRAKSF-WECLKMFDEMMESGEAVPNEATLVSVLT 160
A + F+ MP R++VSWN +++ R F E K+FD M +
Sbjct: 88 ARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQR--------------- 132
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
D + +++ Y K G MD A ++F+ MP RNVVS
Sbjct: 133 -------------------------DCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVS 167
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKK 247
N+++ G+ L+G+ + A+ F +M ++
Sbjct: 168 CNAVVNGFLLNGDVDSAVGFFRKMGER 194
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 158/407 (38%), Positives = 241/407 (59%), Gaps = 17/407 (4%)
Query: 2 YSVFGRVSDARLLFDS-------------SLTLDLVSYNSMIDGHVKNGETGAARKLFDE 48
Y G V +AR +FD L ++VS+NSM+ +VK G+ +AR+LFD
Sbjct: 243 YGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDR 302
Query: 49 MPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
M RD +WN +I GYV +GD+E A++LF MP DV+SWN +I G ++G++ EFF
Sbjct: 303 MVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFF 362
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
MP +N++SWNS++A + + + + +++F +M GE P+ TL S+L+ L L
Sbjct: 363 ENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGER-PDRHTLSSILSVSTGLVDL 421
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMG 227
+G +H F+ + + D+ ++ L+TMY +CG + AR VF+EM + ++V++WN+MI G
Sbjct: 422 YLGKQIHQFV-TKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGG 480
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y HG +ALELF M+ +P TF+ VL+AC HAG+V EG F+ M Y IEP
Sbjct: 481 YAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEP 540
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+VEH+ +VD+L R G ++ + +LI + VK C H + +L ++ AK
Sbjct: 541 RVEHFASLVDILGRQGQLQEAMDLIVNMPVK-PDKAVWGALLGACRVHSNVDLAQVAAKA 599
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
LI LEP PY +L N YA G+WDD ERVR ++ E ++K+A S
Sbjct: 600 LIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYS 646
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 58/311 (18%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
GR++ AR LFDS+ + V++NSMI G+V+ E AR+LFDEMP+RD+ +WN +I+GY
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 66 AVGD---LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
+ +E +LF+ MP RD VSWN +I G + G + A+E F MP RNVVS N++
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAV 171
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-------- 174
+ + + F +M E + A+L +++ GKL + +
Sbjct: 172 VNGFLLNGDVDSAVGFFRKMGER-----DSASLSGLVSGLVRNGKLDMAAEILVEYGNEG 226
Query: 175 ---------------------------HSF--IKSNN---------IKVDVLLSTCLLTM 196
H F + S+ +K +V+ ++
Sbjct: 227 DEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMC 286
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
YVK G + AR++FD M R+ SWN++I GY G+ E+A +LFLEM P P+ ++
Sbjct: 287 YVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEM----PIPDVLSW 342
Query: 257 VCVLSACTHAG 267
++S + G
Sbjct: 343 NSIISGFSQIG 353
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 32/284 (11%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ GR+ A +F+S ++VS N++++G + NG+ +A F +M RD + + ++
Sbjct: 144 YAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLV 203
Query: 62 AGYVAVGDLEAANELFERM------PDRDVVSWNCMIDGCVRVGNVPLALEFFN------ 109
+G V G L+ A E+ D V ++N +I G + G V A F+
Sbjct: 204 SGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQ 263
Query: 110 -------RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
R RNVVSWNSM+ +V+A ++FD M+E N +V+
Sbjct: 264 GEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWN-----TVIGGY 318
Query: 163 AHLGKL--SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
+G + + +++ I DVL +++ + + G + ++ F+ MP +N++S
Sbjct: 319 VQIGDMEEASKLFLEMPIP------DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLIS 372
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
WNS+I GY + + + A+ELF +M+ KG +P+ T +LS T
Sbjct: 373 WNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVST 416
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 44/207 (21%)
Query: 44 KLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPL 103
K D +P + ++ N I+ + G L AA LF+ R+ V+WN MI G V+ +
Sbjct: 29 KTNDTIP-QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAK 87
Query: 104 ALEFFNRMPARNVVSWNSMLA--LHVRAKSF-WECLKMFDEMMESGEAVPNEATLVSVLT 160
A + F+ MP R++VSWN +++ R F E K+FD M +
Sbjct: 88 ARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQR--------------- 132
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
D + +++ Y K G MD A ++F+ MP RNVVS
Sbjct: 133 -------------------------DCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVS 167
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKK 247
N+++ G+ L+G+ + A+ F +M ++
Sbjct: 168 CNAVVNGFLLNGDVDSAVGFFRKMGER 194
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 158/407 (38%), Positives = 241/407 (59%), Gaps = 17/407 (4%)
Query: 2 YSVFGRVSDARLLFDS-------------SLTLDLVSYNSMIDGHVKNGETGAARKLFDE 48
Y G V +AR +FD L ++VS+NSM+ +VK G+ +AR+LFD
Sbjct: 243 YGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDR 302
Query: 49 MPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
M RD +WN +I GYV +GD+E A++LF MP DV+SWN +I G ++G++ EFF
Sbjct: 303 MVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFF 362
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
MP +N++SWNS++A + + + + +++F +M GE P+ TL S+L+ L L
Sbjct: 363 ENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGER-PDRHTLSSILSVSTGLVDL 421
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMG 227
+G +H F+ + + D+ ++ L+TMY +CG + AR VF+EM + ++V++WN+MI G
Sbjct: 422 YLGKQIHQFV-TKTVVPDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGG 480
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y HG +ALELF M+ +P TF+ VL+AC HAG+V EG F+ M Y IEP
Sbjct: 481 YAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEP 540
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+VEH+ +VD+L R G ++ + +LI + VK C H + +L ++ AK
Sbjct: 541 RVEHFASLVDILGRQGQLQEAMDLIVNMPVK-PDKAVWGALLGACRVHSNVDLAQVAAKA 599
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
LI LEP PY +L N YA G+WDD ERVR ++ E ++K+A S
Sbjct: 600 LIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYS 646
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 58/311 (18%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
GR++ AR LFDS+ + V++NSMI G+V+ E AR+LFDEMP+RD+ +WN +I+GY
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 66 AVGD---LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
+ +E +LF+ MP RD VSWN +I G + G + A+E F MP RNVVS N++
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAV 171
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-------- 174
+ + + F +M E + A+L +++ GKL + +
Sbjct: 172 VNGFLLNGDVDSAVGFFRKMGER-----DSASLSGLVSGLVRNGKLDMAAEILVEYGNEG 226
Query: 175 ---------------------------HSF--IKSNN---------IKVDVLLSTCLLTM 196
H F + S+ +K +V+ ++
Sbjct: 227 DEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMC 286
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
YVK G + AR++FD M R+ SWN++I GY G+ E+A +LFLEM P P+ ++
Sbjct: 287 YVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEM----PIPDVLSW 342
Query: 257 VCVLSACTHAG 267
++S + G
Sbjct: 343 NSIISGFSQIG 353
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 32/284 (11%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ GR+ A +F+S ++VS N++++G + NG+ +A F +M RD + + ++
Sbjct: 144 YAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLV 203
Query: 62 AGYVAVGDLEAANELFERM------PDRDVVSWNCMIDGCVRVGNVPLALEFFN------ 109
+G V G L+ A E+ D V ++N +I G + G V A F+
Sbjct: 204 SGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQ 263
Query: 110 -------RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
R RNVVSWNSM+ +V+A ++FD M+E N +V+
Sbjct: 264 GEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWN-----TVIGGY 318
Query: 163 AHLGKL--SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
+G + + +++ I DVL +++ + + G + ++ F+ MP +N++S
Sbjct: 319 VQIGDMEEASKLFLEMPIP------DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLIS 372
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
WNS+I GY + + + A+ELF +M+ KG +P+ T +LS T
Sbjct: 373 WNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVST 416
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 44/207 (21%)
Query: 44 KLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPL 103
K D +P + ++ N I+ + G L AA LF+ R+ V+WN MI G V+ +
Sbjct: 29 KTNDTIP-QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAK 87
Query: 104 ALEFFNRMPARNVVSWNSMLA--LHVRAKSF-WECLKMFDEMMESGEAVPNEATLVSVLT 160
A + F+ MP R++VSWN +++ R F E K+FD M +
Sbjct: 88 ARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQR--------------- 132
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
D + +++ Y K G MD A ++F+ MP RNVVS
Sbjct: 133 -------------------------DCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVS 167
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKK 247
N+++ G+ L+G+ + A+ F +M ++
Sbjct: 168 CNAVVNGFLLNGDVDSAVGFFRKMGER 194
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 233/381 (61%), Gaps = 6/381 (1%)
Query: 15 FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAAN 74
FDS + + ++++ + G ARK+FDEM RDV+ W MI+ YV D+E+A
Sbjct: 109 FDSHVFVQ----TTLVEFYSSLGYVCDARKVFDEMSARDVYAWTTMISAYVRNNDVESAE 164
Query: 75 ELFERMPD-RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFW 133
LF MP+ ++ +WN +IDG ++GN+ FF +P+++++SW ++++ +++ K +
Sbjct: 165 ILFVEMPEGKNTATWNAVIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSCYLKNKRYG 224
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
E +K+F EM+ G+ VP+E + +V++ACAHLG L G VH ++ + +DV + + L
Sbjct: 225 EVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSL 284
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
+ MY KCG+++ + VF ++ +N+ WNSMI G HG ++AL +F EME++G +PN
Sbjct: 285 IDMYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNR 344
Query: 254 ATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
TFV VL+ACTHAG + EG +F M Y I P+VEHYGC+VDLL++ GL++++ E+I+
Sbjct: 345 VTFVSVLTACTHAGFIQEGRRFFTSMIEDYCISPQVEHYGCMVDLLSKGGLLEDALEMIR 404
Query: 314 YVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWD 373
+ + C H + E+ + + L+ LEP + G Y +L N YA RW
Sbjct: 405 GMRFE-PNSFIWGALLNGCKVHRNLEIARVTVRNLMILEPSNSGHYSLLVNMYAEVNRWS 463
Query: 374 DVERVRVMIREKGLQKEAASS 394
DV ++R +++ G++K S
Sbjct: 464 DVAKIRTEMKDLGVEKRCPGS 484
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
N+ A+ F ++ N + +N+++ V + S + L + M+ S +P+ + S++
Sbjct: 27 NINFAISTFTQITKPNTLVYNALIKACVHSHSSNQALLHYIHMLRSS-VIPSSYSFSSLI 85
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
AC L G +H + V + T L+ Y G + AR VFDEM R+V
Sbjct: 86 KACTLLTDAVNGKTLHGHVWKYGFDSHVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVY 145
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
+W +MI Y + + E A LF+EM + N AT+ V+ G + ++F
Sbjct: 146 AWTTMISAYVRNNDVESAEILFVEMPE---GKNTATWNAVIDGYAKLGNIERVEFFF 199
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 247/426 (57%), Gaps = 3/426 (0%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY FG V AR +FD LVS+ ++I G+ + G+ ARKLFD M RDV +N M
Sbjct: 167 MYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVM 226
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN 120
I GYV +G ++ A +LF++M ++V+SW M+ G G+V A F+ MP +NV+SWN
Sbjct: 227 IDGYVKMGRMDLARDLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWN 286
Query: 121 SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS 180
+M+ + + + LK+F EM + + NE T+VSVL A A L L +G WVH F++
Sbjct: 287 AMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQR 346
Query: 181 NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALEL 240
N + V + L+ MY KCG + A+ VF+EM ++ SWN++I GYG++G ++ALE+
Sbjct: 347 NQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEV 406
Query: 241 FLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLA 300
F M ++G +PN T VLSAC H G+V EG F+ M R + I P++EHYGC++DLL
Sbjct: 407 FAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMER-FGIVPQIEHYGCMIDLLG 465
Query: 301 RAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYI 360
RAG + +E+LI+ + C D E + K +++E G Y+
Sbjct: 466 RAGRLDEAEKLIQAMPYDPNEIILTSFLFACCYFE-DVSRAERILKVAVKMEKEGAGDYV 524
Query: 361 MLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYS 420
ML N YA + RW DVE V+ M++++G KE A SV+ + D + FV Y H + +
Sbjct: 525 MLRNLYATERRWADVEDVKEMMKKRGSNKEVAWSVIEV-DGRFREFVAGYYSHSHSHLEA 583
Query: 421 MLSELG 426
+ S LG
Sbjct: 584 IQSTLG 589
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 2/146 (1%)
Query: 98 VGNVPLALEFFNRMPARNVVSW--NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
V V A FFN P + N+++ H + F ++++ + P+ T
Sbjct: 67 VSIVQHARLFFNHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQFSKDCFFRPSSYTF 126
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
+L C+ G +H + N +D+ + T L+ MYVK G + AR VFDEM V
Sbjct: 127 TLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSV 186
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELF 241
R++VSW ++I+GY G+ +A +LF
Sbjct: 187 RSLVSWTAVIVGYARCGDMVEARKLF 212
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 216/369 (58%), Gaps = 2/369 (0%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+V+ N ++ Y G +++A+ LF+ +P RD+VSWN MIDG ++ GNV +A + F MP
Sbjct: 145 EVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMP 204
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+NV+SW SM+ VR E L + +M+ +G P++ TL L+ACA LG L G
Sbjct: 205 EKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAG-IKPDKITLSCSLSACAGLGALEQGK 263
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
W+H++I N IK+D +L L+ MYVKCG M A VF ++ + V +W ++I G+ +HG
Sbjct: 264 WIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHG 323
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G +AL+ F +M+K G KP TF VL+AC+H G+V EG F+ M YN++P +EHY
Sbjct: 324 KGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHY 383
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
GC+VDLL RAG +K ++E ++ + +K C H ELG+ + K LIEL+
Sbjct: 384 GCMVDLLGRAGFLKEAKEFVESMPIK-PNAAIWGSLLNACHLHKHLELGKEIGKFLIELD 442
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P G YI L++ +AA G WD+ +VR I+ KGL S + L ++F
Sbjct: 443 PEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEFFAGAEPH 502
Query: 413 HRKRIMYSM 421
R MY M
Sbjct: 503 PHVREMYDM 511
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 137/290 (47%), Gaps = 52/290 (17%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y++ G + A +LFD + D+VS+N+MIDG++K G A K+F MP ++V +W M
Sbjct: 155 VYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSM 214
Query: 61 IAGYVAVGDLEAANELFERM------PDRDVVSWN------------------------- 89
I G+V G + A L ++M PD+ +S +
Sbjct: 215 IVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKI 274
Query: 90 --------CMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML---ALHVRAKSFWECLKM 138
+ID V+ G + AL F+++ + V +W +++ A+H + E L
Sbjct: 275 KIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGS---EALDW 331
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS-NNIKVDVLLSTCLLTMY 197
F +M ++G P T +VLTAC+H G + G + + + N+K + C++ +
Sbjct: 332 FTQMQKAG-IKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLL 390
Query: 198 VKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
+ G + A++ + MP++ N W S++ LH K LEL E+ K
Sbjct: 391 GRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLH----KHLELGKEIGK 436
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 39/243 (16%)
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA-TLVSV 158
N+ A F+R+ + N V WN+M+ + + E L ++ +M+ ++P+ A T +
Sbjct: 60 NLTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLH--HSIPHNAYTFPFL 117
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L AC+ L L+ +H I +V + LL +Y G++ A +FD +P R++
Sbjct: 118 LKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDI 177
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKK------------------------------- 247
VSWN+MI GY GN E A ++F M +K
Sbjct: 178 VSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVA 237
Query: 248 GPKPNDATFVCVLSACTHAGMVMEGWWYFDLM-RRVYNIEPKVEHYGC-IVDLLARAGLV 305
G KP+ T C LSAC G + +G W + + I+P + GC ++D+ + G +
Sbjct: 238 GIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVL---GCALIDMYVKCGEM 294
Query: 306 KNS 308
K +
Sbjct: 295 KKA 297
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 232/386 (60%), Gaps = 7/386 (1%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLE 71
RL F S + V N+++ H K G+ A LFD+ DV W+ +IAGY GDL+
Sbjct: 136 RLGFGS----NAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLK 191
Query: 72 AANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKS 131
A +LF MP+RD+VSWN MI G V+ G + A F+ P ++VVSWN+M+A +V
Sbjct: 192 VARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGL 251
Query: 132 FWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI-KVDVLLS 190
+ L++F+EM +G P+E TL+S+L+ACA LG L G VH+ + ++ K+ LL
Sbjct: 252 SKQALELFNEMCRAG-VFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLG 310
Query: 191 TCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPK 250
L+ MY KCG + + DVF + ++V+SWNS+I+G LHG+G+++L LF M++
Sbjct: 311 NALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKIC 370
Query: 251 PNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEE 310
PN+ TFV VL AC+HAG + EG+ YFDLM Y IEP + H GC+VD+L RAGL+K + +
Sbjct: 371 PNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAK 430
Query: 311 LIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQG 370
I + ++ C H D EL ++ ++L + G Y+++SN YA++G
Sbjct: 431 FIDSMKIE-PNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRG 489
Query: 371 RWDDVERVRVMIREKGLQKEAASSVV 396
WD E+VR ++ + G+ K SS V
Sbjct: 490 EWDGAEKVRKLMDDSGVTKIRGSSFV 515
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 134/281 (47%), Gaps = 49/281 (17%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ G + AR LF+ DLVS+N MI G+VK GE +AR LFDE PV+DV +WN MI
Sbjct: 184 YARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMI 243
Query: 62 AGYVAVGDLEAANELFERM------PDR-------------------------------- 83
AGYV G + A ELF M PD
Sbjct: 244 AGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMG 303
Query: 84 --DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECLKM 138
+ N +ID + GN+ +L+ F + ++V+SWNS+ +ALH K E L +
Sbjct: 304 KLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGK---ESLSL 360
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMY 197
F +MM+ + PNE T V VL AC+H G++ G + S I+ ++ C++ M
Sbjct: 361 F-KMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDML 419
Query: 198 VKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKA 237
+ G + A D M + N + W +++ +HG+ E A
Sbjct: 420 GRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELA 460
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 32/175 (18%)
Query: 73 ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSF 132
A++LF ++P D +N MI G + N P R + + M V+ S+
Sbjct: 61 AHQLFAQIPQPDTFMYNVMIRGSSQSPN-----------PLRAISLYTEMHRHFVKGDSY 109
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
T VL AC L ++ G VH + + ++
Sbjct: 110 ---------------------TFPFVLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNT 148
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
LL + KCG +++A +FD+ +VV+W+S+I GY G+ + A +LF EM ++
Sbjct: 149 LLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPER 203
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/455 (34%), Positives = 258/455 (56%), Gaps = 24/455 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN-- 58
MYS G ++DAR LFD ++VS+ SMI G+V+N A LF E + D +++
Sbjct: 130 MYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEI 189
Query: 59 -------------CMIAGYVAVGDLEAANELFERMPDRD-----VVSWNCMIDGCVRVGN 100
C+I+ V +++ E + + + N ++D + G
Sbjct: 190 VGVGVGVDSVLLGCVISACARVC-VKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGE 248
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
+ ++ + F+ M +V SWNS++A++ + E +F +M++ GE N TL +VL
Sbjct: 249 ISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLL 308
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
ACAH G L +G +H + ++ ++++ T ++ MY KCG +++AR FD + +NV S
Sbjct: 309 ACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKS 368
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
W M+ GYG+HG+G++A+++F EM + G KPN TFV VL+AC+HAG++ EGW +F+ M+
Sbjct: 369 WTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMK 428
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSEL 340
+++EP +EHY C+VDLL RAG +K + LI+ + VK C H + EL
Sbjct: 429 CEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVK-PDFIVWGSLLGACRIHKNVEL 487
Query: 341 GEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
GEI A++L +L+P + G Y++LSN YA GRWDDVER+R++++ GL K S+V +
Sbjct: 488 GEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKG 547
Query: 401 FESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAG 435
+ V + + +Y L EL ++KL G
Sbjct: 548 RVHVFLVGDKEHPQHEKIYEYLDEL--NVKLQEVG 580
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 150/325 (46%), Gaps = 33/325 (10%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDVWN 56
S+FG+ D ++ S+NS+I ++G++ A F M P R
Sbjct: 40 SMFGKYVDKTSVY---------SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRS--T 88
Query: 57 WNCMIAGYVAVGDLEAANELFERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ C I ++ DL A ++ ++ D+ + +ID + G + A + F+ +P
Sbjct: 89 FPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP 148
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE----------ATLVSVLTAC 162
RNVVSW SM++ +V+ + E + +F E + E +E L V++AC
Sbjct: 149 ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISAC 208
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
A + SV VH + + + L+ Y KCG + ++R VFD M +V SWN
Sbjct: 209 ARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWN 268
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
S+I Y +G +A LF +M K+G + N T VL AC H+G + G D + +
Sbjct: 269 SLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK 328
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVK 306
+ +E + IVD+ + G V+
Sbjct: 329 M-ELEDNLVVGTSIVDMYCKCGRVE 352
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/455 (34%), Positives = 258/455 (56%), Gaps = 24/455 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN-- 58
MYS G ++DAR LFD ++VS+ SMI G+V+N A LF E + D +++
Sbjct: 130 MYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEI 189
Query: 59 -------------CMIAGYVAVGDLEAANELFERMPDRD-----VVSWNCMIDGCVRVGN 100
C+I+ V +++ E + + + N ++D + G
Sbjct: 190 VGVGVGVDSVLLGCVISACARVC-VKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGE 248
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
+ ++ + F+ M +V SWNS++A++ + E +F +M++ GE N TL +VL
Sbjct: 249 ISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLL 308
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
ACAH G L +G +H + ++ ++++ T ++ MY KCG +++AR FD + +NV S
Sbjct: 309 ACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKS 368
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
W M+ GYG+HG+G++A+++F EM + G KPN TFV VL+AC+HAG++ EGW +F+ M+
Sbjct: 369 WTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMK 428
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSEL 340
+++EP +EHY C+VDLL RAG +K + LI+ + VK C H + EL
Sbjct: 429 CEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVK-PDFIVWGSLLGACRIHKNVEL 487
Query: 341 GEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
GEI A++L +L+P + G Y++LSN YA GRWDDVER+R++++ GL K S+V +
Sbjct: 488 GEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKG 547
Query: 401 FESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAG 435
+ V + + +Y L EL ++KL G
Sbjct: 548 RVHVFLVGDKEHPQHEKIYEYLDEL--NVKLQEVG 580
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 150/325 (46%), Gaps = 33/325 (10%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDVWN 56
S+FG+ D ++ S+NS+I ++G++ A F M P R
Sbjct: 40 SMFGKYVDKTSVY---------SWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRS--T 88
Query: 57 WNCMIAGYVAVGDLEAANELFERM----PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ C I ++ DL A ++ ++ D+ + +ID + G + A + F+ +P
Sbjct: 89 FPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP 148
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE----------ATLVSVLTAC 162
RNVVSW SM++ +V+ + E + +F E + E +E L V++AC
Sbjct: 149 ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISAC 208
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
A + SV VH + + + L+ Y KCG + ++R VFD M +V SWN
Sbjct: 209 ARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWN 268
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
S+I Y +G +A LF +M K+G + N T VL AC H+G + G D + +
Sbjct: 269 SLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVK 328
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVK 306
+ +E + IVD+ + G V+
Sbjct: 329 M-ELEDNLVVGTSIVDMYCKCGRVE 352
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 255/465 (54%), Gaps = 42/465 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----------- 49
Y+ G + +AR +FD S D+V++ +MIDG+ + + A ++F+ M
Sbjct: 188 FYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVT 247
Query: 50 ------PVRDVWNW----------------------NCMIAGYVAVGDLEAANELFERMP 81
D+ N N ++ YV L A ELF+RM
Sbjct: 248 LIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMA 307
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+DV SW M++G + G++ A FF++ P +N V W++M+A + + E LK+F E
Sbjct: 308 TKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHE 367
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKC 200
MME G VP E TLVSVL+AC L L++G W+H F+ I + V L ++ MY KC
Sbjct: 368 MMERG-VVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKC 426
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G++D A +VF MP RN++SWN+MI GY +G ++A+ +F +M G +PN+ TFV +L
Sbjct: 427 GSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLL 486
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXX 320
+AC+H G++ EG YFD M R Y I+P+ HY C+VDLL R GL++ + +LI + ++
Sbjct: 487 TACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQ-P 545
Query: 321 XXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRV 380
C H + EL + A L+ L+P D G Y++L+NT A +W DV RVR
Sbjct: 546 CEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRS 605
Query: 381 MIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
++++KG++K S++ ++ ++ V + S + +Y +L E+
Sbjct: 606 LMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYKVLEEI 650
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 32/262 (12%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D +++ N +I G + A + F+ ++VV+W +M+ + E +++F+
Sbjct: 176 DCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFEL 235
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M+ S PNE TL++V++AC+ +G L +G VH ++ N++ + L LL MYVKC
Sbjct: 236 MLLS-HVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCD 294
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA------------------------ 237
+ AR++FD M ++V SW SM+ GY G+ E A
Sbjct: 295 CLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQ 354
Query: 238 -------LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
L+LF EM ++G P + T V VLSAC + G W I V
Sbjct: 355 NNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVT 414
Query: 291 HYGCIVDLLARAGLVKNSEELI 312
IVD+ A+ G + + E+
Sbjct: 415 LENAIVDMYAKCGSIDAATEVF 436
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 14/226 (6%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
G++ A FNR+ N WN+M+ + A+ F M + + + + V
Sbjct: 92 GDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEM-DSRSFVFA 150
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L AC + G V+ + ++L+ L+ Y + G + AR VFDE ++V
Sbjct: 151 LKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDV 210
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL 278
V+W +MI GY H E+A+E+F M +PN+ T + V+SAC+ G + G
Sbjct: 211 VTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMG------ 264
Query: 279 MRRVY------NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+RV+ N+ + + ++D+ + + ++ EL ++ K
Sbjct: 265 -KRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK 309
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 150/388 (38%), Positives = 239/388 (61%), Gaps = 12/388 (3%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
V D++ N ++A Y GD+ AA +F+ +P +VVSW+ MI G +VG+V A FF+
Sbjct: 139 VFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDE 198
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
P ++ W +M++ +V+ F E L +F +M+ + VP+E+ VS+L+ACAHLG L +
Sbjct: 199 APEKDKGIWGAMISGYVQNSCFKESLYLF-RLMQLTDIVPDESIFVSILSACAHLGALEI 257
Query: 171 GMWVHSFIKSNNIKV---DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
G+W+H + N +K+ V LST LL MY KCG ++LA+ +FD M +R+VV WN+MI G
Sbjct: 258 GVWIHQHL--NQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISG 315
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
+HG+G+ AL+LF +MEK G KP+D TF+ V +AC+++GM EG D M VYNI P
Sbjct: 316 MAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVP 375
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVK---XXXXXXXXXXXXXCTTHMDSELGEIV 344
K EHYGC+VDLL+RAGL + + +I+ ++ C H +++L E+
Sbjct: 376 KSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLAELA 435
Query: 345 AKRLIELE-PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFES 403
A+++++L+ + G Y++LSN YAA G+ D RVR M++ KG K S V ++ S
Sbjct: 436 AEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSSVEIDGVIS 495
Query: 404 KYFVKNYSVHRKRIMYSMLSELGAHIKL 431
++ + + ++S+L ++ H++L
Sbjct: 496 EFIAGEKTHPQMEEIHSVLKKM--HMQL 521
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 47/209 (22%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY VFG V AR +FD +L++VS++ MI G+ K G+ +AR FDE P +D W M
Sbjct: 151 MYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAM 210
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVS----------------------W---------- 88
I+GYV + + LF M D+V W
Sbjct: 211 ISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKL 270
Query: 89 --------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML---ALHVRAKSFWECLK 137
++D + GN+ LA F+ M R+VV WN+M+ A+H K LK
Sbjct: 271 VPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGKG---ALK 327
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLG 166
+F +M + G P++ T ++V TAC++ G
Sbjct: 328 LFYDMEKVG-VKPDDITFIAVFTACSYSG 355
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 111/250 (44%), Gaps = 32/250 (12%)
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
++ A F ++ V +N+++ + F L++F +M++S E P+ T+ VL
Sbjct: 56 SLTYACRVFEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQS-ELKPDNYTIPYVL 114
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
AC S G +H + + D+ + L+ MY G + AR VFDE+P NVV
Sbjct: 115 KACGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVV 174
Query: 220 SWNSMIMGYGLHGNGEKA-------------------------------LELFLEMEKKG 248
SW+ MI GY G+ + A L LF M+
Sbjct: 175 SWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTD 234
Query: 249 PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
P+++ FV +LSAC H G + G W + ++ + V ++D+ A+ G ++ +
Sbjct: 235 IVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELA 294
Query: 309 EELIKYVSVK 318
+ L ++++
Sbjct: 295 KRLFDSMNMR 304
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 148/429 (34%), Positives = 239/429 (55%), Gaps = 2/429 (0%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y G++ +AR +++ D+ + +++ G ++NG A ++F ++ RD WN MI
Sbjct: 307 YVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMI 366
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
AGY G + A LF +MP ++ VSWN MI G + G + A E F M RNV+SWNS
Sbjct: 367 AGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNS 426
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
++ ++ + + LK M + G+ P+++T L++CA+L L VG +H I +
Sbjct: 427 LITGFLQNGLYLDALKSLVLMGQEGKK-PDQSTFACSLSSCANLAALQVGKQLHELILKS 485
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
D+ +S L+ MY KCG + A VF ++ +++SWNS+I GY L+G +A F
Sbjct: 486 GYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAF 545
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
+M +G P++ TF+ +LSAC+HAG+ +G F M + IEP EHY C+VDLL R
Sbjct: 546 EQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGR 605
Query: 302 AGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIM 361
G ++ + +++ + VK C H + ELG+I A RL+ELEP + YI
Sbjct: 606 MGRLEEAFNIVRGMKVK-ANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYIT 664
Query: 362 LSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSM 421
LSN +A GRW+DVER+RV++RE+ K S + +++ + + R + +
Sbjct: 665 LSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKII 724
Query: 422 LSELGAHIK 430
L+ L AH++
Sbjct: 725 LNTLSAHMR 733
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 180/369 (48%), Gaps = 62/369 (16%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ GR DA +F+ DLVSYNSM+ G+ +NG+ G A K F+ M R+V +WN M+
Sbjct: 152 YAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMV 211
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
AG+V DL +A ELFE++PD + VSW M+ G R G + A + F+RMP +NVVSWN+
Sbjct: 212 AGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNA 271
Query: 122 MLALHVRAKSFWECLKMFDEM--------------------MESGEAVPNE------ATL 155
M+A +V+ E +K+F E ++ V N+ A
Sbjct: 272 MIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAK 331
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
++++ G++ V S + K D + ++ Y + G M A ++F +MPV
Sbjct: 332 TALMSGLIQNGRIDEASQVFSQLN----KRDAICWNSMIAGYCQSGRMSEALNLFRQMPV 387
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELF-------------------------------LEM 244
+N VSWN+MI GY G ++A E+F + M
Sbjct: 388 KNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLM 447
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
++G KP+ +TF C LS+C + + G +L+ + I ++ + A+ G
Sbjct: 448 GQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVS-NALIAMYAKCGG 506
Query: 305 VKNSEELIK 313
V+++E++ K
Sbjct: 507 VQSAEKVFK 515
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 149/310 (48%), Gaps = 44/310 (14%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G++ +A+ +F + + + +YNSM+ KNG AR+LFD+M R++ +WN MIAGY+
Sbjct: 31 GKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYL 90
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR-NVVSWNSMLA 124
+E A++LF+ M +RD SW MI R G + A E F +P + + WN+M+A
Sbjct: 91 HNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIA 150
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM-----WVHSFIK 179
+ + F + K+F++M V + + S+L GK+ + M +
Sbjct: 151 GYAKKGRFDDAEKVFEKM-----PVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVV 205
Query: 180 SNNIKVDVLLSTC----------------------LLTMYVKCGAMDLARDVFDEMPVRN 217
S N+ V ++ C +L + + G + AR +FD MP +N
Sbjct: 206 SWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKN 265
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
VVSWN+MI Y ++A++LF K+ P + ++ +++ G + D
Sbjct: 266 VVSWNAMIAAYVQDLQIDEAVKLF----KETPYKDCVSWTTMINGYVRVGKL-------D 314
Query: 278 LMRRVYNIEP 287
R VYN P
Sbjct: 315 EAREVYNQMP 324
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 18/248 (7%)
Query: 35 KNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDG 94
K G+ A+++F + ++ +N M+ + G + A +LF++M R++VSWN MI G
Sbjct: 29 KQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAG 88
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE-- 152
+ V A + F+ M R+ SW M+ + R M ++ E E VP++
Sbjct: 89 YLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRK-------GMLEKARELFELVPDKLD 141
Query: 153 -ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD 211
A +++ A G+ V + D++ +L Y + G M LA F+
Sbjct: 142 TACWNAMIAGYAKKGRFDDAEKVFEKMPVK----DLVSYNSMLAGYTQNGKMGLAMKFFE 197
Query: 212 EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
M RNVVSWN M+ G+ + + A ELF +K P PN ++V +L G ++E
Sbjct: 198 RMAERNVVSWNLMVAGFVNNCDLGSAWELF----EKIPDPNAVSWVTMLCGFARHGKIVE 253
Query: 272 GWWYFDLM 279
FD M
Sbjct: 254 ARKLFDRM 261
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 159/429 (37%), Positives = 241/429 (56%), Gaps = 5/429 (1%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY 64
FG + +AR FD D S+N+M+ G+ + AR+L MP ++ W+ M++GY
Sbjct: 117 FG-IHNARDFFDWMPVRDTASWNTMLSGYAQVRMMDEARRLLVAMPEKNCVTWSAMVSGY 175
Query: 65 VAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA 124
VA GDL+AA E F P + V++W MI G ++ G V LA F ++ + +V+WN+M+A
Sbjct: 176 VACGDLDAAVECFYAAPMKSVITWTAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIA 235
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
+V LK+F M+E+G PN +L SVL C+ L L G VH + + +
Sbjct: 236 GYVDNGRAENGLKLFKTMLETG-VKPNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLS 294
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
D T L++MY KCG + + D+F ++P ++VV+WN+MI GY HG GEKAL LF EM
Sbjct: 295 RDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDEM 354
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
+K KP+ TFV VL AC HAGMV G YF+ M + + I+ + EHYGC+VDLL RAG
Sbjct: 355 KKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVKEFGIKTRPEHYGCMVDLLGRAGR 414
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSN 364
+ + +++K + K C H + E AK L+EL+P Y+ L+N
Sbjct: 415 LSEAVDMVKSMPFK-PHPAIFGTLLGACRIHKSMHMAEFAAKNLLELDPTSATGYVQLAN 473
Query: 365 TYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRI-MYSMLS 423
YAAQ +W+ V RVR ++E + K S + + + + F N +H + + ++ L
Sbjct: 474 VYAAQSKWEHVARVRKSMKENNVVKPPGYSWIEINNAVHE-FRSNDRLHPELVSIHEKLD 532
Query: 424 ELGAHIKLS 432
+L +KL+
Sbjct: 533 KLETKMKLA 541
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 125/268 (46%), Gaps = 41/268 (15%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVK-NGETGAARKLFDEMPVRDVWNWNCMIAGY 64
G + A +F + + ++N+++ K +G AR+LFD++P + ++N M+A Y
Sbjct: 54 GDIDSALRVFHNMTVISTTTWNTILGAFAKKHGNFERARQLFDKIPEPNTVSYNTMLACY 113
Query: 65 VAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA 124
+ + A + F+ MP RD SWN M+ G +V + A MP +N V+W++M++
Sbjct: 114 LHHFGIHNARDFFDWMPVRDTASWNTMLSGYAQVRMMDEARRLLVAMPEKNCVTWSAMVS 173
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
+V D +E A P + SV+T W
Sbjct: 174 GYVACGD-------LDAAVECFYAAP----MKSVIT------------W----------- 199
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
T ++T Y+K G + LA +F ++ ++ +V+WN+MI GY +G E L+LF M
Sbjct: 200 ------TAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTM 253
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ G KPN + VL C+ + G
Sbjct: 254 LETGVKPNALSLTSVLLGCSDLSALQTG 281
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/410 (36%), Positives = 230/410 (56%), Gaps = 33/410 (8%)
Query: 7 RVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVA 66
R+ DA+ LFD D+V +MI G+ + G AR+LFDEM VR+V+ W M++GY
Sbjct: 160 RIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAK 219
Query: 67 VGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV--------- 117
G ++ A +LFE MP+R+ VSW M+ G + G + A E F MP + +V
Sbjct: 220 NGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQF 279
Query: 118 ----------------------SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
+WN+M+ + R E L +F M G A+ N ++
Sbjct: 280 GLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVAL-NFPSM 338
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
+SVL+ CA L L G VH+ + + D+ +++ L+TMYVKCG + A+ +F+
Sbjct: 339 ISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLF 398
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWY 275
++VV WNSMI GY HG GE+AL +F +M G +P++ TF+ VLSAC+++G V EG+
Sbjct: 399 KDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEI 458
Query: 276 FDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTH 335
F+ M+ Y +EP +EHY C+VDLL RAG V + EL++ + ++ C H
Sbjct: 459 FEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPME-PDAIVWGALLGACRNH 517
Query: 336 MDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREK 385
M +L E+ ++L +LEP + GPY++LS+ YA +GRW DVE +R I +
Sbjct: 518 MKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRR 567
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 145/272 (53%), Gaps = 13/272 (4%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGD 69
DA LLFD + VS+N MI G+VKNG ARK+FD MP R+V +W M+ GYV G
Sbjct: 70 DALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGM 129
Query: 70 LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRA 129
+E A +LF MP R+VVSW MI G ++ + A + F+ +P ++VV +M+ + +
Sbjct: 130 VEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQV 189
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E ++FDEM V N T ++++ A G++ V + + N +
Sbjct: 190 GRLDEARELFDEM-----KVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERN----EVS 240
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
T +L Y + G M A ++F+ MPV+ +V+ N MI+ +GL G +A +F M+++
Sbjct: 241 WTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKER-- 298
Query: 250 KPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
++ T+ ++ G+ +E F M+R
Sbjct: 299 --DEGTWNAMIKVFERKGLDLEALGLFARMQR 328
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 136/248 (54%), Gaps = 11/248 (4%)
Query: 2 YSVFGRVSDARLLFDSSL--TLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC 59
Y G + +AR +FD++ + S+N+M+ + ++ + A LFD+MP R+ ++N
Sbjct: 29 YGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNG 88
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
MI+GYV G + A ++F+ MP+R+VVSW M+ G V+ G V A + F MP RNVVSW
Sbjct: 89 MISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSW 148
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
M+ ++ + K+FD + E V + +++ +G+L + +K
Sbjct: 149 TVMIGGLLKESRIDDAKKLFDMIPEKDVVV-----VTNMIGGYCQVGRLDEARELFDEMK 203
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
N V T +++ Y K G +D+AR +F+ MP RN VSW +M+MGY G ++A E
Sbjct: 204 VRN----VFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFE 259
Query: 240 LFLEMEKK 247
LF M K
Sbjct: 260 LFEAMPVK 267
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 133/259 (51%), Gaps = 15/259 (5%)
Query: 23 LVSYNSMIDGHVKNGETGAARKLFDEMPV--RDVWNWNCMIAGYVAVGDLEAANELFERM 80
L S S I + + G+ ARK+FD P+ R + +WN M++ Y A LF++M
Sbjct: 19 LCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM 78
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
P R+ VS+N MI G V+ G V A + F+ MP RNVVSW SM+ +V+ E K+F
Sbjct: 79 PQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFW 138
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
EM N + ++ ++ + I DV++ T ++ Y +
Sbjct: 139 EMPRR-----NVVSWTVMIGGLLKESRIDDAKKLFDMIPEK----DVVVVTNMIGGYCQV 189
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G +D AR++FDEM VRNV +W +M+ GY +G + A +LF M P+ N+ ++ +L
Sbjct: 190 GRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVM----PERNEVSWTAML 245
Query: 261 SACTHAGMVMEGWWYFDLM 279
T +G + E + F+ M
Sbjct: 246 MGYTQSGRMKEAFELFEAM 264
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 134/259 (51%), Gaps = 9/259 (3%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G V+DAR +FD ++VS+ SM+ G+V+ G A KLF EMP R+V +W MI G +
Sbjct: 97 GMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLL 156
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
++ A +LF+ +P++DVV MI G +VG + A E F+ M RNV +W +M++
Sbjct: 157 KESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSG 216
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
+ + K+F+ M E NE + ++L G++ ++ +K
Sbjct: 217 YAKNGRVDVARKLFEVMPER-----NEVSWTAMLMGYTQSGRMKEAF---ELFEAMPVKW 268
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
V + +L + G M AR +F+ M R+ +WN+MI + G +AL LF M+
Sbjct: 269 IVACNEMILQFGL-AGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQ 327
Query: 246 KKGPKPNDATFVCVLSACT 264
++G N + + VLS C
Sbjct: 328 REGVALNFPSMISVLSVCA 346
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 240/420 (57%), Gaps = 13/420 (3%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
LF + +L +S MI H + ++G +F + D+ Y +G L+
Sbjct: 84 FLFTTCTSLSSLSLGQMI--HTQFMKSGFKHDVFASTALLDM---------YAKLGCLKF 132
Query: 73 ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSF 132
A +F+ M +++ +WN M+ GC R G++ ALE F MP+RNVVSW +M++ +++ K +
Sbjct: 133 ARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQY 192
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
+ L +F M + PNE TL SVL ACA+LG L +G V + + N ++ +
Sbjct: 193 EKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNGFFKNLFVCNA 252
Query: 193 LLTMYVKCGAMDLARDVFDEMP-VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKP 251
+L MY KCG +D+A VFDE+ RN+ SWNSMIMG +HG KA++L+ +M ++G P
Sbjct: 253 VLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREGTLP 312
Query: 252 NDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+D TFV +L ACTH GMV +G F M R +NI PK+EHYGC+VDLL RAG + + E+
Sbjct: 313 DDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLGRAGRLTEAYEV 372
Query: 312 IKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGR 371
IK + +K C+ H + EL E+ A+ L LEP + G Y++LSN YA+ G+
Sbjct: 373 IKRMPMK-PDSVIWGTLLGACSFHGNVELAEVAAESLFVLEPWNPGNYVILSNIYASAGK 431
Query: 372 WDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKL 431
WD V ++R +++ + K A S + K+ V++ S ++++L+ + IK
Sbjct: 432 WDGVAKLRKVMKGSKITKTAGQSFIEEGGQLHKFIVEDRSHSESSEIFALLNGVYEMIKF 491
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
+C ++ +M G + PN+ T + T C L LS+G +H+ + K DV ST L
Sbjct: 62 QCFTLYSQMYLHGHS-PNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTAL 120
Query: 194 LTMYVKCGAMDLARDVFDE-------------------------------MPVRNVVSWN 222
L MY K G + AR+VFDE MP RNVVSW
Sbjct: 121 LDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWT 180
Query: 223 SMIMGYGLHGNGEKALELFLEMEK-KGPKPNDATFVCVLSACTHAGMVMEG 272
+M+ GY + EKAL LF+ ME+ K PN+ T VL AC + G + G
Sbjct: 181 TMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIG 231
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 50/283 (17%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G + AR +FD +L ++N+M+ G + G+ A +LF MP R+V +W M
Sbjct: 123 MYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTM 182
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVS--------------------------------- 87
++GY+ E A LF RM VS
Sbjct: 183 VSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNG 242
Query: 88 -------WNCMIDGCVRVGNVPLALEFFNRMPA-RNVVSWNSM---LALHVRAKSFWECL 136
N +++ + G + +A + F+ + RN+ SWNSM LA+H + + +
Sbjct: 243 FFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCH---KAI 299
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLT 195
+++D+M+ G +P++ T V +L AC H G + G V S + NI + C++
Sbjct: 300 QLYDQMLREG-TLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVD 358
Query: 196 MYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKA 237
+ + G + A +V MP++ + V W +++ HGN E A
Sbjct: 359 LLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELA 401
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 242/412 (58%), Gaps = 4/412 (0%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
GR+ DA LF+ D+VS+ +M+ G KNG AR +FD MP+R+V +WN MIAGY
Sbjct: 140 GRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMPIRNVVSWNAMIAGYA 199
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
G + A +LFERMP+RD+ SWN M+ G ++ G++ A + F+ MP +NV++W +M+
Sbjct: 200 QNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTG 259
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
+V+ E LK+F++M + P T V+VL AC+ L L G +H I +
Sbjct: 260 YVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQE 319
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDE--MPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
+ + L+ MY KCG +A+ +FD+ ++++WN MI Y HG G +A+ LF +
Sbjct: 320 STYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNK 379
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
M++ G + ND T+V +L+AC+HAG+ EG+ YFD + + ++ + +HY C++DL RAG
Sbjct: 380 MQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYMQVREDHYTCLIDLCGRAG 439
Query: 304 LVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLS 363
+ + +I+ + K C+ H ++++G +VA +++++EP + Y++ S
Sbjct: 440 RLDEALNIIEGLG-KEVSLSVWGALLAGCSVHGNADIGRLVADKVLKMEPENADTYLLAS 498
Query: 364 NTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRK 415
N YA+ G ++ VR+ +++KGL+K+ S + + + + FV N H +
Sbjct: 499 NMYASVGMREEAANVRMKMKDKGLKKQPGCSWIDVGN-TVQVFVVNDKSHSQ 549
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 141/272 (51%), Gaps = 41/272 (15%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y R+ +A LF+ ++VS+N+MIDG+ +NG T A LF MP R+V +WN ++
Sbjct: 74 YIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMPERNVVSWNTVM 133
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
G ++ A LF M +RDVVSW M+ G + G V A + F+RMP RNVVSWN+
Sbjct: 134 TALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMPIRNVVSWNA 193
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
M+A + + F E LK+F+ M E +P+ T+V
Sbjct: 194 MIAGYAQNGRFDEALKLFERMPE--RDMPSWNTMV------------------------- 226
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
T +++ G ++ A +F MP +NV++W +M+ GY HG E+AL+LF
Sbjct: 227 -------------TGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLF 273
Query: 242 LEME-KKGPKPNDATFVCVLSACTHAGMVMEG 272
+M+ G KP TFV VL AC+ + EG
Sbjct: 274 NKMQANDGLKPTTGTFVTVLGACSDLAGLPEG 305
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 125/222 (56%), Gaps = 10/222 (4%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-PDRDV 85
N I + G+ ARK+FDEM RD W MI+GY+ G + A +LF+R+ ++ V
Sbjct: 5 NYFISKLCREGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAEKSV 64
Query: 86 VSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
+ W M+ G +++ + A FN MP RNVVSWN+M+ + R E + +F M E
Sbjct: 65 IVWTAMVSGYIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMPER 124
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
N + +V+TA AH G++ + + ++ DV+ T ++ K G +D
Sbjct: 125 -----NVVSWNTVMTALAHCGRIDDAERLFNEMRER----DVVSWTTMVAGLSKNGRVDD 175
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
ARDVFD MP+RNVVSWN+MI GY +G ++AL+LF M ++
Sbjct: 176 ARDVFDRMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPER 217
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 252/461 (54%), Gaps = 42/461 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----------- 49
Y+ G + +AR +FD S D+V++ +MIDG+ + + A ++F+ M
Sbjct: 138 FYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVT 197
Query: 50 ------PVRDVWNW----------------------NCMIAGYVAVGDLEAANELFERMP 81
D+ N N ++ YV L A ELF+RM
Sbjct: 198 LIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMA 257
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+DV SW M++G + G++ A FF++ P +N V W++M+A + + E LK+F E
Sbjct: 258 TKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHE 317
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKC 200
MME G VP E TLVSVL+AC L L++G W+H F+ I + V L ++ MY KC
Sbjct: 318 MMERG-VVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKC 376
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G++D A +VF MP RN++SWN+MI GY +G ++A+ +F +M G +PN+ TFV +L
Sbjct: 377 GSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLL 436
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXX 320
+AC+H G++ EG YFD M R Y I+P+ HY C+VDLL R GL++ + +LI + ++
Sbjct: 437 TACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQ-P 495
Query: 321 XXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRV 380
C H + EL + A L+ L+P D G Y++L+NT A +W DV RVR
Sbjct: 496 CEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRS 555
Query: 381 MIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSM 421
++++KG++K S++ ++ ++ V + S + +Y +
Sbjct: 556 LMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYKL 596
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 32/262 (12%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D +++ N +I G + A + F+ ++VV+W +M+ + E +++F+
Sbjct: 126 DCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFEL 185
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M+ S PNE TL++V++AC+ +G L +G VH ++ N++ + L LL MYVKC
Sbjct: 186 MLLS-HVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCD 244
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA------------------------ 237
+ AR++FD M ++V SW SM+ GY G+ E A
Sbjct: 245 CLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQ 304
Query: 238 -------LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
L+LF EM ++G P + T V VLSAC + G W I V
Sbjct: 305 NNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVT 364
Query: 291 HYGCIVDLLARAGLVKNSEELI 312
IVD+ A+ G + + E+
Sbjct: 365 LENAIVDMYAKCGSIDAATEVF 386
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 14/226 (6%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
G++ A FNR+ N WN+M+ + A+ F M + + + + V
Sbjct: 42 GDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEM-DSRSFVFA 100
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L AC + G V+ + ++L+ L+ Y + G + AR VFDE ++V
Sbjct: 101 LKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDV 160
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL 278
V+W +MI GY H E+A+E+F M +PN+ T + V+SAC+ G + G
Sbjct: 161 VTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMG------ 214
Query: 279 MRRVY------NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+RV+ N+ + + ++D+ + + ++ EL ++ K
Sbjct: 215 -KRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK 259
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 244/441 (55%), Gaps = 41/441 (9%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV------- 54
Y+ F + AR +FD DLVS+NS+I G+ + +F+EM + DV
Sbjct: 121 YAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTM 180
Query: 55 ------------WN--------------------WNCMIAGYVAVGDLEAANELFERMPD 82
W N +I Y ++ A +F+RM D
Sbjct: 181 VKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRD 240
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
R++VSWN MI G + GN+ A + F+ MP R+V+SW SM++ + +A F + +++F EM
Sbjct: 241 RNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEM 300
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
M + + P+E T+ SVL+ACAH+G L VG VH +I+ ++ D+ + L+ MY KCGA
Sbjct: 301 MVT-KVKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGA 359
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
++ VF+EM R+ VSW S+I G ++G+ + AL LF M ++G +P TFV VL A
Sbjct: 360 VEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLA 419
Query: 263 CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXX 322
C HAG+V +G YF+ M RVY + P+++HYGC+VDLL+R+G + + E IK + +
Sbjct: 420 CAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMD-PDV 478
Query: 323 XXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMI 382
H + L EI K+L+E +P + G YI+ SNTYA RW+DV ++R ++
Sbjct: 479 VVWRILLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLM 538
Query: 383 REKGLQKEAASSVVHLEDFES 403
E + K +ASS V + D +S
Sbjct: 539 EESNVHKPSASSSVEINDSDS 559
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 136/274 (49%), Gaps = 43/274 (15%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D D+ N +I G + A + F+ M R++VSWNS++ + R + + E L +F+E
Sbjct: 108 DSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEE 167
Query: 142 MMES---GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
M + G+AV T+V V+ AC LG+ V + +I+ N ++VDV L L+ MY
Sbjct: 168 MRMADVKGDAV----TMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYG 223
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN------------------------- 233
+ +DLAR VFD M RN+VSWN+MIMGYG GN
Sbjct: 224 RRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISS 283
Query: 234 ----GE--KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
G+ KA+ LF EM KP++ T VLSAC H G + G + +R+ Y++
Sbjct: 284 YSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRK-YDVNA 342
Query: 288 KVEHYGCIVDLLARAGLVKNS----EELIKYVSV 317
+ ++D+ + G V+ EE+ K SV
Sbjct: 343 DIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSV 376
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 133/311 (42%), Gaps = 51/311 (16%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY V AR +FD ++VS+N+MI G+ K G AARKLFD+MP RDV +W M
Sbjct: 221 MYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSM 280
Query: 61 IAGYVAVGDLEAANELFERM------PDR------------------------------- 83
I+ Y G A LF+ M PD
Sbjct: 281 ISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDV 340
Query: 84 --DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D+ N +ID + G V L F M R+ VSW S++A S L +F
Sbjct: 341 NADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSL 400
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGM-WVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
M+ G P T V VL ACAH G + G+ + S + + ++ C++ + +
Sbjct: 401 MLREG-VRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRS 459
Query: 201 GAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGPKPNDATF 256
G + A + MP+ +VV W ++ +HGN E A + LE + N +
Sbjct: 460 GNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETDPS----NSGNY 515
Query: 257 VCVLSACTHAG 267
+LS+ T+AG
Sbjct: 516 --ILSSNTYAG 524
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 11/232 (4%)
Query: 78 ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
E +P + +N + + N+ A E F ++P + WN M+ + E ++
Sbjct: 4 ELLPTDPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIR 63
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
++ +M S N T +L ACA + +S VH+ + D+ +S L+ Y
Sbjct: 64 NYN-LMYSQALFGNNLTYPFLLKACARISNVSCTT-VHARVLKLGFDSDLFVSNALIHGY 121
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
+ AR VFDEM R++VSWNS+I GYG + L +F EM K + T V
Sbjct: 122 AGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMV 181
Query: 258 CVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE---HYG-CIVDLLARAGLV 305
V+ ACT V+ W D M Y E KVE + G ++D+ R +V
Sbjct: 182 KVVLACT----VLGEWGVVDAMIE-YIEENKVEVDVYLGNTLIDMYGRRSMV 228
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/342 (42%), Positives = 211/342 (61%), Gaps = 5/342 (1%)
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
Y G +E AN++F+ M R+VV WN MI+G ++G++ + L+ F RM R+VVSWN M+
Sbjct: 153 YSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMI 212
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI 183
+ + K E +F EM+E G P++ATLV+VL CA LG + G W+HS+ +
Sbjct: 213 SCLAQRKKDGEAFGIFREMLEQGFE-PDDATLVTVLPVCARLGDVDAGEWIHSYADGKGL 271
Query: 184 KVDVL-LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
V+ + L+ Y KCG ++ A VF+EM +NVVSWN+MI G GL+G GE +ELF
Sbjct: 272 LRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFE 331
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
+M +KG P+D+TFV VL+ C HAG V +G FD M + + PK+EHYGC+VDLL R
Sbjct: 332 KMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRC 391
Query: 303 GLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIML 362
G VK + +LI+ + + C TH D E+ EI AK L+ LEP + G Y++L
Sbjct: 392 GHVKEAYDLIRNMPL-MPNAALWGALLSACRTHGDREVAEIAAKELVRLEPGNSGNYVLL 450
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESK 404
SN YA + +W++VE+VRV+++ G++K S L+D K
Sbjct: 451 SNVYAEERKWNEVEKVRVLMQGVGIKKNPGQSA--LQDSHRK 490
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 55/285 (19%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+YS G++ DA +FD L ++V +N MI+G K G+ KLF M R V +WN M
Sbjct: 152 VYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLM 211
Query: 61 IAGYV-------AVGDL-EAANELFE--------------RMPDRDVVSW---------- 88
I+ A G E + FE R+ D D W
Sbjct: 212 ISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGL 271
Query: 89 --------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA-LHVRAKSFWECLKMF 139
N ++D + GN+ A + FN M +NVVSWN+M++ L + K +++F
Sbjct: 272 LRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELG-VELF 330
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLST------CL 193
++M G P+++T V VL CAH G + G + +++ V LS C+
Sbjct: 331 EKMARKG-VTPSDSTFVGVLACCAHAGFVDKGREIF-----DSMTVKFKLSPKLEHYGCV 384
Query: 194 LTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGNGEKA 237
+ + +CG + A D+ MP+ N W +++ HG+ E A
Sbjct: 385 VDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVA 429
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 37/237 (15%)
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
C + +P A FN N++ +NS++ H F + F+ M + +P+ T
Sbjct: 51 CTSLHQIPYATTIFNHTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFT 110
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
+L A ++L +G +H+ + + + LL +Y CG M+ A VFDEM
Sbjct: 111 FPPLLKATSYLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEML 170
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALEL-------------------------------FLE 243
R VV WN MI G+ G+ E L+L F E
Sbjct: 171 HREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFRE 230
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWW---YFD---LMRRVYNIEPKVEHYGC 294
M ++G +P+DAT V VL C G V G W Y D L+R+V ++ + + C
Sbjct: 231 MLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYC 287
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 257/439 (58%), Gaps = 5/439 (1%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
GR+ DA LF+ D+VS+ +M+ G KNG AAR++FD+MP+R+V +WN MIAGY
Sbjct: 184 GRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYA 243
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
G + A +LFERMP+RD+ SWN M+ G ++ G++ A + F+ MP +NV++W +M+
Sbjct: 244 QNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTG 303
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
+V+ E LK+F++M + P T V+VL AC+ L L G +H I +
Sbjct: 304 YVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQE 363
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDE--MPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
+ + L+ MY KCG +A+ +FD+ ++++WN MI Y HG G +A+ LF +
Sbjct: 364 STYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNK 423
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
M++ G + ND T+V +L+AC+HAG+ EG+ YFD + + I+ + +HY C++DL RAG
Sbjct: 424 MQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVREDHYTCLIDLCGRAG 483
Query: 304 LVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLS 363
+ + +I+ + K C+ H ++++G++VA +++++EP + Y++ S
Sbjct: 484 RLDEALNIIEGLG-KEVSLSLWGALLAGCSVHGNADIGKLVADKVLKMEPENADTYLLAS 542
Query: 364 NTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLS 423
N YA+ G ++ VR+ +++KGL+K+ S + + + + V + S + ++ +L
Sbjct: 543 NMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNTVQVFVVNDKSHSQFEMLKYLLL 602
Query: 424 ELGAHIKLSPAGSIEKDNF 442
+L H K+ + D+
Sbjct: 603 DL--HTKMKKNRDMSDDDL 619
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 141/272 (51%), Gaps = 41/272 (15%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y R+ +A LF+ ++VS+N+MIDG+ +NG T A LF MP R+V +WN ++
Sbjct: 118 YIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVM 177
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
G ++ A LF M +RDVVSW M+ G + G V A E F++MP RNVVSWN+
Sbjct: 178 TALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNA 237
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
M+A + + F E LK+F+ M E +P+ T+V
Sbjct: 238 MIAGYAQNGRFDEALKLFERMPE--RDMPSWNTMV------------------------- 270
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
T +++ G ++ A +F MP +NV++W +M+ GY HG E+AL+LF
Sbjct: 271 -------------TGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLF 317
Query: 242 LEME-KKGPKPNDATFVCVLSACTHAGMVMEG 272
+M+ G KP TFV VL AC+ + EG
Sbjct: 318 NKMQANDGLKPTTGTFVTVLGACSDLAGLPEG 349
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 206/453 (45%), Gaps = 57/453 (12%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
++LT ++ N I + G+ ARK+FDEM RD W MI+GY+ G + A +L
Sbjct: 39 ATLTSEMKRCNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKL 98
Query: 77 FERMPD--RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE 134
F+R PD + V+ W M+ G +++ + A FN MP RNVVSWN+M+ + R E
Sbjct: 99 FDR-PDAQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQE 157
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLL 194
L +F M E N + +V+TA AH G++ + + ++ DV+ T ++
Sbjct: 158 ALDLFGRMPER-----NVVSWNTVMTALAHCGRIDDAERLFNEMRER----DVVSWTTMV 208
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG------ 248
K G +D AR+VFD+MP+RNVVSWN+MI GY +G ++AL+LF M ++
Sbjct: 209 AGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNT 268
Query: 249 ---------------------PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
P+ N T+ +++ G+ E F+ M+ ++P
Sbjct: 269 MVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKP 328
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEI-VAK 346
+ ++ + + +++ + +S +M S+ G+ VAK
Sbjct: 329 TTGTFVTVLGACSDLAGLPEGQQIHQMIS---KTVFQESTYVVSALINMYSKCGDFHVAK 385
Query: 347 RLIE---LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKE--------AASSV 395
++ + MD+ + + YA G ++ + ++E G Q A S
Sbjct: 386 KMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSH 445
Query: 396 VHLEDFESKYF---VKNYSVHRKRIMYSMLSEL 425
L D KYF +KN + + Y+ L +L
Sbjct: 446 AGLFDEGFKYFDELLKNRYIQVREDHYTCLIDL 478
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 154/454 (33%), Positives = 244/454 (53%), Gaps = 33/454 (7%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNW---------- 57
+ DAR LFD + +S+N+MI G+ ++G+ AR+LF+E PVRDV+ W
Sbjct: 188 LGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQS 247
Query: 58 ---------------------NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCV 96
N MIAGYV ++ A ELFE MP R+V SWN +I G
Sbjct: 248 GMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYG 307
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
+ G++ A E F+ M R+ VSW +++A + + + + + M +M G+++ N +T
Sbjct: 308 QNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSL-NRSTFC 366
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
L+ CA + L +G VH L+ LL MY KCG++ A DVF+ M ++
Sbjct: 367 CALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLK 426
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
+++SWN+M+ GY HG G +AL +F M+ G KP++ T V VL AC+H G+ G YF
Sbjct: 427 DIISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRGTEYF 486
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHM 336
M + Y I P +HY C++DLL RAGL++ + L++ + + H
Sbjct: 487 YSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGAS-RIHG 545
Query: 337 DSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
++ELGE A+ + +EP + G Y++LSN YA G+W DV ++R+ +R+ G+QK S V
Sbjct: 546 NAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGYSWV 605
Query: 397 HLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
+++ K+ V + K +Y+ L E+ +K
Sbjct: 606 EVQNKIHKFTVGDCFHPEKDRIYAYLEEIDLKMK 639
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 147/293 (50%), Gaps = 42/293 (14%)
Query: 7 RVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVA 66
R+ DAR LFD D VS+N M+ G+V++G A+ +FD MP +D +WN ++A YV
Sbjct: 94 RLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQ 153
Query: 67 VGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALH 126
G LE A LFE D +++SWNC++ G V+ + A F+ MP RN +SWN+M++ +
Sbjct: 154 NGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGY 213
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD 186
R + ++F+E V + T +++ A G L V +
Sbjct: 214 ARDGDLLQARRLFEE-----SPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKR---- 264
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF----- 241
+ ++ YV+ MD+AR++F+ MP RNV SWN++I GYG +G+ +A ELF
Sbjct: 265 EMAYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQ 324
Query: 242 --------------------------LEMEKKGPKPNDATFVCVLSACTHAGM 268
++M++ G N +TF C LS C AGM
Sbjct: 325 RDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTC--AGM 375
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 125/257 (48%), Gaps = 44/257 (17%)
Query: 23 LVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPD 82
+V + I H++NG A ++FD MP +++++WN M+ GYV L A LF+ MP
Sbjct: 48 IVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQ 107
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
+D VSWN M+ G VR G V A F+ MP ++ +SWN +LA++V+ E ++F+
Sbjct: 108 KDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESK 167
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
++ W +++ CL+ YVK
Sbjct: 168 VD----------------------------W------------ELISWNCLMGGYVKRKM 187
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+ AR +FD MPVRN +SWN+MI GY G+ +A LF E P + T+ ++ A
Sbjct: 188 LGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEE----SPVRDVFTWTAMVFA 243
Query: 263 CTHAGMVMEGWWYFDLM 279
+GM+ E FD M
Sbjct: 244 YVQSGMLDEARRVFDEM 260
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/343 (41%), Positives = 222/343 (64%), Gaps = 4/343 (1%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ DV+ N +I+ ++ G + A ++F+ M RDVVSWN M+ G +R G V +AL F +
Sbjct: 161 LNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRK 220
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEM-MESGEAV--PNEATLVSVLTACAHLGK 167
M RN+++WNS++ V+A E L++F EM SG+ V P++ T+ SVL+ACA LG
Sbjct: 221 MNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGS 280
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+ G WVH++++ N+I+ DV++ T L+ MY KCG + A ++F++MP ++ +W +MI
Sbjct: 281 IDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISV 340
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
+ LHG G+KA + FLEMEK G KPN TFV +LSAC+H+G+V +G FD+M+RVY+IEP
Sbjct: 341 FALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEP 400
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
++ HY C+VD+L+RA L + LI+ + +K C H + +LGE VA
Sbjct: 401 QIYHYACMVDILSRARLFDEALFLIRSMPMK-PDVYVWGALLGGCQMHGNIKLGEKVAHY 459
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKE 390
LI+LEP + YI L + Y G++D +R+R ++E+G++ +
Sbjct: 460 LIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIETK 502
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 74/351 (21%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
++ FG +AR +FD D+VS+NSM+ G+++NGE A LF +M R++ WN +
Sbjct: 173 LFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSI 232
Query: 61 IAGYVAVGDLEAANELFERM----------PDR--------------------------- 83
I G V G + + E+F M PD+
Sbjct: 233 ITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLR 292
Query: 84 ------DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML---ALHVRAKSFWE 134
DVV +++ + G+V A+E FN MP ++ +W +M+ ALH K ++
Sbjct: 293 KNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFD 352
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS-NNIKVDVLLSTCL 193
C F EM ++G PN T V +L+AC+H G + G +K +I+ + C+
Sbjct: 353 C---FLEMEKAG-VKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACM 408
Query: 194 LTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGP 249
+ + + D A + MP++ +V W +++ G +HGN GEK +++E
Sbjct: 409 VDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPH-- 466
Query: 250 KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN------IEPKVEHYGC 294
N A ++ + AG +D +R+ N IE K+ GC
Sbjct: 467 --NHAFYINLCDIYVKAGK-------YDAAKRIRNSMKERGIETKIP--GC 506
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLG-KLSVGMWVHSFIKSNNIKVDVLLST 191
++ L ++ +M+ G VPN T ++ C+ L +VG +H+ + DV +
Sbjct: 110 YKALMLYKQMLNKG-IVPNNLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGN 168
Query: 192 CLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG--- 248
L+++++ G AR VFDEM VR+VVSWNSM++GY +G E AL LF +M +
Sbjct: 169 SLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIIT 228
Query: 249 --------------------------------PKPNDATFVCVLSACTHAGMVMEGWWYF 276
KP+ T VLSAC G + G W
Sbjct: 229 WNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVH 288
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+R+ +IE V +V++ + G V+ + E+
Sbjct: 289 AYLRK-NDIECDVVIGTALVNMYGKCGDVQQAIEI 322
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/433 (32%), Positives = 247/433 (57%), Gaps = 50/433 (11%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM-------PVRDVW--- 55
G + AR+ FD +VS+N+M+ G+ + G +LF++M P W
Sbjct: 214 GNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTV 273
Query: 56 ----------------------------NW---NCMIAGYVAVGDLEAANELFERM---P 81
N+ ++ + G+LEAA+++FE++
Sbjct: 274 ISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYK 333
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
R V WN MI RVG++P A F++MP R+ VSWNSM+A + + + +K+F+E
Sbjct: 334 YRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEE 393
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M+ S ++ P+E T+VSV +AC HLG+L +G W S +K N+I++ + + L++MY +CG
Sbjct: 394 MISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCG 453
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+M A +F EM R++VS+N++I G+ HG+G +++EL L+M++ G +P+ T++ +L+
Sbjct: 454 SMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILT 513
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC+HAG++ EG F+ ++ P V+HY C++D+L RAG ++ + +LI+ + ++
Sbjct: 514 ACSHAGLLGEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPME-PH 567
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
+ H ELGE+ A +L ++EP + G Y++LSN YA+ GRW D ++VR
Sbjct: 568 AGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDT 627
Query: 382 IREKGLQKEAASS 394
+R++G++K S
Sbjct: 628 MRKQGVKKTTGLS 640
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 173/323 (53%), Gaps = 43/323 (13%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPD---- 82
N ++ + K G ARKLFDEMP R V +WN MI+GY G+ E A+ LF M D
Sbjct: 138 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 197
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
R+V++W MI G + GN+ A +F++MP R+VVSWN+ML+ + + + E +++F++M
Sbjct: 198 RNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDM 257
Query: 143 MESGEAVPNEATLVSVLTACAHLGK--LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
+ G P+E T V+V+++C+ LG LS + V + + + + T LL M+ KC
Sbjct: 258 LSPGNVQPDETTWVTVISSCSSLGDPCLSESI-VRKLDDTVGFRPNYFVKTALLDMHAKC 316
Query: 201 GAMDL----------------------------------ARDVFDEMPVRNVVSWNSMIM 226
G ++ AR +FD+MP R+ VSWNSMI
Sbjct: 317 GNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIA 376
Query: 227 GYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNI 285
GY +G KA++LF EM + KP++ T V V SAC H G + G W +++ + I
Sbjct: 377 GYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENH-I 435
Query: 286 EPKVEHYGCIVDLLARAGLVKNS 308
+ + Y ++ + +R G ++++
Sbjct: 436 QISISVYNSLISMYSRCGSMQDA 458
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 137/297 (46%), Gaps = 25/297 (8%)
Query: 1 MYSVFGRVSD---ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNW 57
M S + RV D AR LFD D VS+NSMI G+ +NGE+ A KLF+EM +
Sbjct: 343 MISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKP 402
Query: 58 N--CMIAGYVAVGDLE-------AANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
+ M++ + A G L A + L E + +N +I R G++ A+ F
Sbjct: 403 DEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIF 462
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
M R++VS+N++++ E +++ +M E G P+ T +++LTAC+H G L
Sbjct: 463 QEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDG-IEPDRITYIAILTACSHAGLL 521
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMG 227
G + IK DV C++ M + G ++ A + MP+ + + S++
Sbjct: 522 GEGQRLFESIKFP----DVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNA 577
Query: 228 YGLHGN---GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
+H GE A ++E N +V + + AG +G D MR+
Sbjct: 578 TSIHKQVELGELAAAKLFKVEPH----NSGNYVLLSNIYASAGRWKDGDKVRDTMRK 630
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 222/377 (58%), Gaps = 5/377 (1%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
NS++ + + G AR LFD++ + +WN MI+ Y V D E+A+ L E MP + VV
Sbjct: 163 NSLLYFYSQCGLVSVARHLFDQIKDTSLVSWNIMISAYDLVNDYESADYLLELMPCKTVV 222
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
SWN +I +R+G+V A F MP RN VSWNSM+A V + + L++F EM +G
Sbjct: 223 SWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAG 282
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
P E TL+S+L ACA G L +G ++ +K K++ L L+ MY KCG + LA
Sbjct: 283 -VKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLA 341
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK---GPKPNDATFVCVLSAC 263
++F+ M ++ V WN+M++G +HG E+ +LF EME+ +P+ TF+ VL AC
Sbjct: 342 WEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVAC 401
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXX 323
+H G+V + WYFD M + Y I P +HYGC+VDLL+R GL++ + ++I +
Sbjct: 402 SHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQ-NSVV 460
Query: 324 XXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIR 383
C T ++EL EI K+L +L+ + G Y++LSN YA GRWD+VER+R +
Sbjct: 461 LWRTLLGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMD 520
Query: 384 EKGLQKEAASSVVHLED 400
+ ++A S +++++
Sbjct: 521 YLHVPRQAGYSQINMKE 537
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 220/377 (58%), Gaps = 5/377 (1%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
NS++ + + G AR LFD++ + +WN MI+ Y V D E A+ L E MP + V+
Sbjct: 165 NSLLYFYSQCGLVSVARYLFDQIKDTSLVSWNIMISAYDRVDDYELADHLLELMPCKTVI 224
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
SWN +I +R+G+V A F MP RN VSWNSM+A V + + L++F EM +G
Sbjct: 225 SWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAG 284
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
P E TL+S+L ACA G L +G ++ +K K++ L L+ MY KCG + LA
Sbjct: 285 -VKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLA 343
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK---GPKPNDATFVCVLSAC 263
++F+ M ++ V WN+M++G +HG E+ +LF EME+ +P+ TF+ VL AC
Sbjct: 344 WEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVAC 403
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXX 323
+H G+V + WYFD M + Y I P +HYGC+VDLL R GL++ + ++I +
Sbjct: 404 SHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQ-NSVV 462
Query: 324 XXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIR 383
C T ++EL EI K+L +L+ + G Y++LSN YA GRWD+VER+R +
Sbjct: 463 LWRTLLGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMD 522
Query: 384 EKGLQKEAASSVVHLED 400
+ ++A S +++++
Sbjct: 523 YLHVPRQAGYSQINMKE 539
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/443 (33%), Positives = 236/443 (53%), Gaps = 44/443 (9%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---------PVRDVW 55
G VS A LLF L ++ +YN++I + N +A +F +M P + +
Sbjct: 55 LGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTF 114
Query: 56 NW---------------------------------NCMIAGYVAVGDLEAANELFERMPD 82
+ N +I Y GDL A ++FE M
Sbjct: 115 PFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSH 174
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
RDV+SWN +I G V++G + A E F+ MP R +VSW +M+ + R + + L +F EM
Sbjct: 175 RDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREM 234
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
G P+E ++++VL ACA LG L VG W+H + N + L+ MY KCG
Sbjct: 235 QMVG-IEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGC 293
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+D A ++FD++ ++V+SW++MI G HG G +A++LF EM K PN+ TF+ VL A
Sbjct: 294 IDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLA 353
Query: 263 CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXX 322
C+H G+ EG YFD+M Y+IEP++EHYGC++DLL R+G + + + I + +K
Sbjct: 354 CSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIK-PDS 412
Query: 323 XXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMI 382
C H + ++ I K+L+ELEP + G Y++L+N YA G+W+DV +R +I
Sbjct: 413 RIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLI 472
Query: 383 REKGLQKEAASSVVHLEDFESKY 405
R K ++K SS + + + ++
Sbjct: 473 RNKRIKKTPGSSSIEVNNVVQEF 495
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 42/279 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ FG +++A +F+ D++S+NS+I G+VK G+ +AR+LFD+MPVR + +W M
Sbjct: 155 MYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTM 214
Query: 61 IAGYVAVGDLEAANELFERM------PDR----------------DVVSW---------- 88
I GY +G A ++F M PD +V W
Sbjct: 215 ITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGF 274
Query: 89 -------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
N +I+ + G + A F+++ ++V+SW++M+ +E +++F+E
Sbjct: 275 LRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEE 334
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGM-WVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
M + PNE T + VL AC+H G G+ + S +I+ ++ CL+ + +
Sbjct: 335 MCKV-RVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRS 393
Query: 201 GAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKAL 238
G + A D +MP++ + WNS++ +H N + A+
Sbjct: 394 GCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAV 432
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM--ESGEA 148
M+D C +G+V A F ++ N+ ++N+++ + + + +F +M+ +
Sbjct: 48 MLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSV 107
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
P++ T V+ +C + +GM VH + + L+ MY K G + A
Sbjct: 108 FPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACK 167
Query: 209 VFDEMPVRNVVSWNS-------------------------------MIMGYGLHGNGEKA 237
VF+EM R+V+SWNS MI GYG G A
Sbjct: 168 VFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDA 227
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW---YFD---LMRRVYNIEPKVEH 291
L++F EM+ G +P++ + + VL AC G + G W Y D +R+ +E
Sbjct: 228 LDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEM 287
Query: 292 Y---GCI 295
Y GCI
Sbjct: 288 YAKCGCI 294
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/443 (33%), Positives = 236/443 (53%), Gaps = 44/443 (9%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---------PVRDVW 55
G VS A LLF L ++ +YN++I + N +A +F +M P + +
Sbjct: 55 LGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTF 114
Query: 56 NW---------------------------------NCMIAGYVAVGDLEAANELFERMPD 82
+ N +I Y GDL A ++FE M
Sbjct: 115 PFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSH 174
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
RDV+SWN +I G V++G + A E F+ MP R +VSW +M+ + R + + L +F EM
Sbjct: 175 RDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREM 234
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
G P+E ++++VL ACA LG L VG W+H + N + L+ MY KCG
Sbjct: 235 QMVG-IEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGC 293
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+D A ++FD++ ++V+SW++MI G HG G +A++LF EM K PN+ TF+ VL A
Sbjct: 294 IDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLA 353
Query: 263 CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXX 322
C+H G+ EG YFD+M Y+IEP++EHYGC++DLL R+G + + + I + +K
Sbjct: 354 CSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIK-PDS 412
Query: 323 XXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMI 382
C H + ++ I K+L+ELEP + G Y++L+N YA G+W+DV +R +I
Sbjct: 413 RIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLI 472
Query: 383 REKGLQKEAASSVVHLEDFESKY 405
R K ++K SS + + + ++
Sbjct: 473 RNKRIKKTPGSSSIEVNNVVQEF 495
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 42/279 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ FG +++A +F+ D++S+NS+I G+VK G+ +AR+LFD+MPVR + +W M
Sbjct: 155 MYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTM 214
Query: 61 IAGYVAVGDLEAANELFERM------PDR----------------DVVSW---------- 88
I GY +G A ++F M PD +V W
Sbjct: 215 ITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGF 274
Query: 89 -------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
N +I+ + G + A F+++ ++V+SW++M+ +E +++F+E
Sbjct: 275 LRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEE 334
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGM-WVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
M + PNE T + VL AC+H G G+ + S +I+ ++ CL+ + +
Sbjct: 335 MCKV-RVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRS 393
Query: 201 GAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKAL 238
G + A D +MP++ + WNS++ +H N + A+
Sbjct: 394 GCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAV 432
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 42/247 (17%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM--ESGEA 148
M+D C +G+V A F ++ N+ ++N+++ + + + +F +M+ +
Sbjct: 48 MLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSV 107
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
P++ T V+ +C + +GM VH + + L+ MY K G + A
Sbjct: 108 FPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACK 167
Query: 209 VFDEMPVRNVVSWNS-------------------------------MIMGYGLHGNGEKA 237
VF+EM R+V+SWNS MI GYG G A
Sbjct: 168 VFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDA 227
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW---YFD---LMRRVYNIEPKVEH 291
L++F EM+ G +P++ + + VL AC G + G W Y D +R+ +E
Sbjct: 228 LDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEM 287
Query: 292 Y---GCI 295
Y GCI
Sbjct: 288 YAKCGCI 294
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 141/381 (37%), Positives = 226/381 (59%), Gaps = 2/381 (0%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ DV +I Y G L+ A +F++M R++VSWN MIDG ++ G+V AL+ F++
Sbjct: 123 MNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDK 182
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+P +NVVSW ++ V+ + + E L+ F EM +G VP+ T++++++ACA+LG L +
Sbjct: 183 LPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAG-VVPDFVTVIAIISACANLGALGL 241
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G+WVH + + +V + L+ MY +CG ++LAR VFD M RN+VSWNS+I+G+ +
Sbjct: 242 GLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAV 301
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
+G +KAL F M+K+G +PN ++ L+AC+HAG++ EG F ++R + P++E
Sbjct: 302 NGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIE 361
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HYGC+VDL +RAG +K + ++IK + + C T D EL E V K +E
Sbjct: 362 HYGCLVDLYSRAGRLKEAWDVIKKMPM-MPNEVVLGSLLAACRTQGDVELAEKVMKYQVE 420
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNY 410
L P Y++ SN YAA G+WD +VR ++E+GLQK A S + ++ K+ +
Sbjct: 421 LYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDK 480
Query: 411 SVHRKRIMYSMLSELGAHIKL 431
+YS L L + L
Sbjct: 481 YHEENDYIYSALELLSFELHL 501
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 145/300 (48%), Gaps = 61/300 (20%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G++ ARL+FD +LVS+N+MIDG++KNG+ A KLFD++PV++V +W +
Sbjct: 135 MYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVV 194
Query: 61 IAGYVAVGDLEAANELFERM------PD-------------------------------- 82
I G+V E A E F M PD
Sbjct: 195 IGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEF 254
Query: 83 RDVVS-WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML------ALHVRAKSFWEC 135
RD V N +ID R G + LA + F+ M RN+VSWNS++ L +A SF+
Sbjct: 255 RDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRS 314
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK---SNNIKVDVLLSTC 192
+K E +E PN + S LTAC+H G + G+ + + IK N+ +++ C
Sbjct: 315 MK--KEGLE-----PNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHY--GC 365
Query: 193 LLTMYVKCGAMDLARDVFDEMP-VRNVVSWNSMIMGYGLHGN---GEKALELFLEMEKKG 248
L+ +Y + G + A DV +MP + N V S++ G+ EK ++ +E+ G
Sbjct: 366 LVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGG 425
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 126/251 (50%), Gaps = 39/251 (15%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
L ++ + VSW S ++ H + +F + F +M+E+ E PN TL+++L+ACA
Sbjct: 40 TLSLKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEA-EVEPNHITLITLLSACA 98
Query: 164 H---LGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
H ++ G +H+ + + DV++ T L+ MY KCG +D AR VFD+M VRN+V
Sbjct: 99 HSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLV 158
Query: 220 SWNSMIMGYGLHGN-------------------------------GEKALELFLEMEKKG 248
SWN+MI GY +G+ E+ALE F EM+ G
Sbjct: 159 SWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAG 218
Query: 249 PKPNDATFVCVLSACTHAGMVMEGWWYFDL-MRRVYNIEPKVEHYGCIVDLLARAGLVKN 307
P+ T + ++SAC + G + G W L M++ + KV ++D+ AR G ++
Sbjct: 219 VVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKV--LNSLIDMYARCGCIEL 276
Query: 308 SEELIKYVSVK 318
+ ++ +S +
Sbjct: 277 ARQVFDGMSQR 287
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 252/470 (53%), Gaps = 41/470 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN---- 56
MY+ R+ DARLLFD D V++N +IDG+ +NG A +LF++M D+
Sbjct: 165 MYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVI 224
Query: 57 -----------------------------------WNCMIAGYVAVGDLEAANELFERMP 81
+I Y G ++ A ++++ +
Sbjct: 225 LCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLS 284
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+ ++ M+ G ++G V A F++M R++V W++M++ + + E LK+FDE
Sbjct: 285 SKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDE 344
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M++ +VP++ T++SV++AC+H+G L+ W+H+++ + + ++ L+ MY KCG
Sbjct: 345 MLQK-RSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCG 403
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+ AR+VF+ MP +NV+SW+SMI + +HGN + A++LF M++ +PN TF+ VL
Sbjct: 404 NLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLY 463
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC HAG+V EG F M + I P EHYGC+VDL RA ++ + ELI+ +
Sbjct: 464 ACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPF-APN 522
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
C H ++ELGE AKRL+ELEP G ++LSN YA + RW+DV +R
Sbjct: 523 VIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKS 582
Query: 382 IREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKL 431
+ KG+ KE ASS + + + + + + + +Y L E+ + +KL
Sbjct: 583 MSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKL 632
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 126/291 (43%), Gaps = 65/291 (22%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
V D + +IA Y + + A LF++M D V+WN +IDG + G+ AL F
Sbjct: 153 VDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLF-- 210
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
E M S + P+ L +VL+AC H G LS
Sbjct: 211 ------------------------------EDMRSSDMKPDSVILCTVLSACGHAGNLSY 240
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD---------------------- 208
G +H F+K N +D L T L+ MY CGAMDLAR
Sbjct: 241 GRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAK 300
Query: 209 ---------VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
+FD+M R++V W++MI GY ++AL+LF EM +K P+ T + V
Sbjct: 301 LGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSV 360
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG-LVKNSE 309
+SAC+H G + + W + R + ++D+ A+ G LVK E
Sbjct: 361 ISACSHVGALAQANWIHTYVDRS-GFGRALSVNNALIDMYAKCGNLVKARE 410
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWE-CLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+++P + N +L H+ SF E + ++ + + + S+L A + +
Sbjct: 77 FSQIPNPHTHFSNQLLR-HLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
+ G+ +H D + T L+ MY C + AR +FD+M + V+WN +I
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
GY +G+ + AL LF +M KP+ VLSAC HAG + G
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYG 241
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 246/463 (53%), Gaps = 41/463 (8%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW---------- 55
G +S A +F+ S DLV++NSMI G VK G A K++ EM V
Sbjct: 207 GELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMI 266
Query: 56 -------------NWNCMIAG----------------YVAVGDLEAANELFERMPDRDVV 86
++C I YV G+L A LF+ M + +V
Sbjct: 267 SSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLV 326
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
SW M+ G R G + +A E ++P ++VV WN++++ V+AK E L +F EM +
Sbjct: 327 SWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEM-QIR 385
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
P++ T+V+ L+AC+ LG L VG+W+H +I+ + + +DV L T L+ MY KCG + A
Sbjct: 386 TIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARA 445
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
VF+E+P RN ++W ++I G LHGN + AL F +M G P++ TF+ VLSAC H
Sbjct: 446 LQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHG 505
Query: 267 GMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXX 326
G+V EG YF M +N+ PK++HY C+VDLL RAG ++ +EEL+K + +
Sbjct: 506 GLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPM-AADAAVLG 564
Query: 327 XXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKG 386
C + + ++GE A +L+E++P D G Y++L++ Y+ W + R ++ +KG
Sbjct: 565 ALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKG 624
Query: 387 LQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHI 429
++K S+V + ++ V++ S + +Y L L +
Sbjct: 625 VEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQL 667
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 153/334 (45%), Gaps = 73/334 (21%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERM-------PDR---------------------- 83
+V++WN I GYV GD+E L++RM PD
Sbjct: 121 NVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGV 180
Query: 84 -----------DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSF 132
D+ N I + G + +A + FN+ R++V+WNSM+ V+
Sbjct: 181 LGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLA 240
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
E +K++ EM E+ + PNE T++ ++++C+ + L++G H +IK + ++ + L+
Sbjct: 241 IEAIKIYKEM-EAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNA 299
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG-------------------- 232
L+ MYVKCG + AR +FD M + +VSW +M++GY G
Sbjct: 300 LMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPW 359
Query: 233 -----------NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
G++AL LF EM+ + +P+ T V LSAC+ G + G W + R
Sbjct: 360 NAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER 419
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
+ + V +VD+ A+ G + + ++ + +
Sbjct: 420 -HKLSIDVALGTALVDMYAKCGNIARALQVFEEI 452
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 51/294 (17%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G + AR+LFD+ LVS+ +M+ G+ + G AR++ ++P + V WN +
Sbjct: 303 MYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAI 362
Query: 61 IAGYVAVGDLEAANELFERM------PDR------------------------------- 83
I+G V + A LF M PD+
Sbjct: 363 ISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKL 422
Query: 84 --DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECLKM 138
DV ++D + GN+ AL+ F +P RN ++W ++ LALH A+ + L
Sbjct: 423 SIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQ---DALSY 479
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMY 197
F +M+ G VP+E T + VL+AC H G + G S + S N+ + +C++ +
Sbjct: 480 FSKMIHIG-IVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLL 538
Query: 198 VKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGN---GEKALELFLEMEKK 247
+ G ++ A ++ MP+ + ++ ++GN GE+ LE++ +
Sbjct: 539 GRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQ 592
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 9/174 (5%)
Query: 92 IDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPN 151
+D C R+ R+ NV SWN+ + +V + ++ M+ G P+
Sbjct: 107 LDYCTRI---------LYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPD 157
Query: 152 EATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD 211
T +L C +G+ V + + D+ + +TM + CG + +A DVF+
Sbjct: 158 NHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFN 217
Query: 212 EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
+ VR++V+WNSMI G G +A++++ EME + +PN+ T + ++S+C+
Sbjct: 218 KSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQ 271
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/377 (39%), Positives = 221/377 (58%), Gaps = 6/377 (1%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
D + + I Y A+G+L A LF++ +DVV W MIDG ++G+V A E F+ MP
Sbjct: 149 DAYVVSGFIEFYSALGELRKARVLFDQTGRKDVVLWTAMIDGYGKIGDVESAREMFDEMP 208
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
RNVVSW++M+A + R F E L +F EM G PN++ LV+VLTACAHLG L+ GM
Sbjct: 209 ERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEG-VRPNDSVLVTVLTACAHLGALTQGM 267
Query: 173 WVHSFIKS-NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
WVHS+ + + + + +L+T L+ MY KCG ++ A VFD + ++V +WN+MI G L+
Sbjct: 268 WVHSYARRFDRVSSNPILATALVDMYSKCGCVESALSVFDGISDKDVGAWNAMISGVALN 327
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G+ K+LELF +M G KPN+ TFV VL+ACTHA MV EG F+ M Y +EP EH
Sbjct: 328 GDARKSLELFQQMIVCGNKPNETTFVAVLTACTHARMVREGLRLFEEMSGTYGVEPCAEH 387
Query: 292 YGCIVDLLARAGLVKNSEELI--KYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
Y C+VDLL+R+G+V+ +E I K C + + +G V K+LI
Sbjct: 388 YACVVDLLSRSGMVEEAERFIEEKMGGFAAGDANVWGAILNACRIYKNINVGNRVWKKLI 447
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWD-DVERVRVMIREKGLQKEAASSVVHLEDFESKYFVK 408
++ D G +++ N Y G WD + RVR MI E G++K+ S++ + + ++
Sbjct: 448 DMGVADCGTHVLTYNIYREAG-WDAEANRVRSMISEAGMKKKPGCSIIEVGNEVEEFLAG 506
Query: 409 NYSVHRKRIMYSMLSEL 425
+ S + + M +L +
Sbjct: 507 DQSHPQAQEMCRLLDSI 523
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 41/204 (20%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
YS G + AR+LFD + D+V + +MIDG+ K G+ +AR++FDEMP R+V +W+ M
Sbjct: 159 FYSALGELRKARVLFDQTGRKDVVLWTAMIDGYGKIGDVESAREMFDEMPERNVVSWSAM 218
Query: 61 IAGYVAVGDLEAANELFERMPDR-----------------------------------DV 85
+A Y V + +LF M D
Sbjct: 219 MAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLGALTQGMWVHSYARRFDR 278
Query: 86 VSWN-----CMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
VS N ++D + G V AL F+ + ++V +WN+M++ + L++F
Sbjct: 279 VSSNPILATALVDMYSKCGCVESALSVFDGISDKDVGAWNAMISGVALNGDARKSLELFQ 338
Query: 141 EMMESGEAVPNEATLVSVLTACAH 164
+M+ G PNE T V+VLTAC H
Sbjct: 339 QMIVCGNK-PNETTFVAVLTACTH 361
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 40/244 (16%)
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL-------- 165
RN N+M+ +++ S + + M+++G AV N T ++ +C L
Sbjct: 70 RNTFIHNTMIRAYLQNHSPTHAVSCYTTMLQNGIAV-NNYTFPPLIKSCTALIAASSKCA 128
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
+ +G VH + + D + + + Y G + AR +FD+ ++VV W +MI
Sbjct: 129 SSVMIGCLVHCHVVLFGLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDVVLWTAMI 188
Query: 226 MGYGLHGNGEKA-------------------------------LELFLEMEKKGPKPNDA 254
GYG G+ E A L+LFLEM+ +G +PND+
Sbjct: 189 DGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDS 248
Query: 255 TFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKY 314
V VL+AC H G + +G W RR + +VD+ ++ G V+++ +
Sbjct: 249 VLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALSVFDG 308
Query: 315 VSVK 318
+S K
Sbjct: 309 ISDK 312
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 253/439 (57%), Gaps = 10/439 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWN 56
MYS FGR+ DA+++FD DLVS+NS+I + +N + A + F M + D+
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLT 325
Query: 57 WNCMIAGYVAVGDLEAANELF-----ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
+ + + + D + + D+DVV N +++ ++G + A F+++
Sbjct: 326 VVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQL 385
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
P ++ +SWN+++ + + E + ++ M E + +PN+ T VS++ A +H+G L G
Sbjct: 386 PRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQG 445
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
M +H+ + N++ +DV ++TCL+ +Y KCG ++ A +F E+P V WN++I G+H
Sbjct: 446 MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIH 505
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G GE+AL+LF +M + K + TFV +LSAC+H+G+V EG FD+M++ Y I+P ++H
Sbjct: 506 GRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKH 565
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
YGC+VDLL RAG ++ + EL++ + ++ C + ++ELG + + RL+E+
Sbjct: 566 YGCMVDLLGRAGYLEKAYELVRNMPIQ-PDASIWGALLSACKIYGNAELGTLASDRLLEV 624
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
+ ++G Y++LSN YA +W+ V +VR + R++GL+K S V + ++ N +
Sbjct: 625 DSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQT 684
Query: 412 VHRKRIMYSMLSELGAHIK 430
+ +Y L L A +K
Sbjct: 685 HPKYTEIYKELKVLSAKMK 703
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 43/281 (15%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA----NELF 77
++V +I+ +V +G+ +R FD + +++++WN +I+ YV G A N+LF
Sbjct: 53 NIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLF 112
Query: 78 ERMPD----RDVVSWNCMIDGCV--------------------------------RVGNV 101
D ++ ++ CV R G +
Sbjct: 113 SMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVL 172
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP-NEATLVSVLT 160
+A + F MP ++V SWN+M++ + + L + + M GE V + T+ S+L
Sbjct: 173 DVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM--KGEGVKMDTITVASILP 230
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
CA + G+ +H + + + DV +S L+ MY K G + A+ VFD+M VR++VS
Sbjct: 231 VCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVS 290
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
WNS+I Y + + AL F M+ G +P+ T V + S
Sbjct: 291 WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTS 331
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE---CLKMF 139
+++V +I+ V G++ L+ F+ + +N+ SWNS+++ +VR + E C+
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
M G P+ T +L AC L G VH + + DV ++ L+ +Y +
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
G +D+A VF +MPV++V SWN+MI G+ +GN AL + M+ +G K + T +
Sbjct: 169 YGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASI 228
Query: 260 LSACTHAGMVMEG 272
L C + V+ G
Sbjct: 229 LPVCAQSDDVING 241
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 221/382 (57%), Gaps = 5/382 (1%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
DV+ + +I + + A ++F+ +R+VV W ++ G G V A + F++MP
Sbjct: 119 DVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMP 178
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP----NEATLVSVLTACAHLGKL 168
RN S+++M++ +VR F E +++F E+ + + N A LVSVL AC +G
Sbjct: 179 LRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAF 238
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
G W+HS+++ N ++ D+ L T L+ Y+KCG + A VF++MPV++V +W++MI+G
Sbjct: 239 EEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGL 298
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
++GN + ALELF +MEK GPKPN+ TFV VL+AC H + E F +M YNI P
Sbjct: 299 AINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPS 358
Query: 289 VEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRL 348
+EHYGC+VD+LAR+G VK + I + ++ C H ELG+ V K L
Sbjct: 359 IEHYGCVVDVLARSGQVKKALTFINSMHIE-PDGAIWGSLLNGCLMHGHYELGQKVGKYL 417
Query: 349 IELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVK 408
IE EP G Y++L+N YA G+W+ V VR +++++G+ + S + ++ K+F
Sbjct: 418 IEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKFFAD 477
Query: 409 NYSVHRKRIMYSMLSELGAHIK 430
+ R +Y +LS LG ++
Sbjct: 478 DKCCLYSREIYDVLSHLGKKVE 499
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 52/287 (18%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDL 70
AR +FD ++V + S++ G+ G AR +FD+MP+R+ +++ M++GYV G
Sbjct: 139 ARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFF 198
Query: 71 EAANELFERMPDRD------------VVS---------------W--------------- 88
+LF + +D +VS W
Sbjct: 199 SEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLE 258
Query: 89 --NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM-LALHVRAKSFWECLKMFDEMMES 145
+ID ++ G V A + FN+MP ++V +W++M L L + + L++F++M +
Sbjct: 259 LGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGNN-KMALELFEKMEKV 317
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMD 204
G PNE T V VLTAC H + + NI + C++ + + G +
Sbjct: 318 GPK-PNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHYGCVVDVLARSGQVK 376
Query: 205 LARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKK 247
A + M + + W S++ G +HG+ G+K + +E E K
Sbjct: 377 KALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFEPK 423
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/434 (32%), Positives = 246/434 (56%), Gaps = 51/434 (11%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM--PVR---DVWNWNCM 60
G + AR+ FD +VS+N+M+ G+ + G +LF++M P D W +
Sbjct: 199 GNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATV 258
Query: 61 IAGYVAVGD------------------------------------LEAANELFERM---P 81
I+ ++GD LEAA+++FE++
Sbjct: 259 ISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYK 318
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
R V WN MI RVG++P A F++MP R+ VSWNSM+A + + ++ +K+F+E
Sbjct: 319 YRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEE 378
Query: 142 MMESGEA-VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
M+ S ++ P+E T+VSV +AC HLG+L +G W S +K N+I++ + + L+ MY +C
Sbjct: 379 MISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRC 438
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G+M A +F EM R++VS+N++I G+ HG+G +++EL +M++ G +P+ T++ +L
Sbjct: 439 GSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAIL 498
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXX 320
+AC+HAG++ EG F+ ++ P V+HY C++D+L RAG ++ + +LI+ + ++
Sbjct: 499 TACSHAGLLDEGQRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPME-P 552
Query: 321 XXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRV 380
+ H ELGE+ A +L ++EP + G Y +LSN YA+ GRW + ++VR
Sbjct: 553 HAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRD 612
Query: 381 MIREKGLQKEAASS 394
+R++G++K S
Sbjct: 613 TMRKQGVKKTTGLS 626
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 175/326 (53%), Gaps = 48/326 (14%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPD---- 82
N ++ + K G ARKLFDEMP R V +WN MI+GY G+ E A+ LF M D
Sbjct: 123 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 182
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
R+V++W MI G + GN+ A +F++MP R+VVSWN+ML+ + + + E +++F++M
Sbjct: 183 RNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDM 242
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV----DVLLSTCLLTMYV 198
+ G P+E T +V+++C+ LG + S ++ + KV + + T LL M+
Sbjct: 243 LSPGNVQPDETTWATVISSCSSLGDPCLS---ESIVRKLDDKVGFRPNYFVKTALLDMHA 299
Query: 199 KCGAMDL----------------------------------ARDVFDEMPVRNVVSWNSM 224
KCG ++ A+ +FD+MP R+ VSWNSM
Sbjct: 300 KCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSM 359
Query: 225 IMGYGLHGNGEKALELFLEM--EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
I GY +G KA++LF EM + KP++ T V V SAC H G + G W ++ +V
Sbjct: 360 IAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSIL-KV 418
Query: 283 YNIEPKVEHYGCIVDLLARAGLVKNS 308
+I+ + Y ++++ +R G ++++
Sbjct: 419 NHIQISISVYNSLINMYSRCGSMQDA 444
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLT 195
+ +F M++ + PN A+ SV+ A G S+ H + + D + +L
Sbjct: 73 VSLFKHMLQHCDIKPN-ASFYSVMMKSA--GSESMLFLAH--VLKSGYDRDHYVRNGILG 127
Query: 196 MYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
+Y K G ++ AR +FDEMP R V WN MI GY GN E+A LF M + N T
Sbjct: 128 IYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVIT 187
Query: 256 FVCVLSACTHAGMVMEGWWYFDLM 279
+ +++ G + YFD M
Sbjct: 188 WTTMITGHAKKGNLKTARMYFDKM 211
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MYS G + DA L+F T DLVSYN++I G ++G + +L +M D
Sbjct: 434 MYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRIT 493
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ ++ G L+ LFE + DV + CMID R G + A++ MP
Sbjct: 494 YIAILTACSHAGLLDEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMP 549
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 241/439 (54%), Gaps = 11/439 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G V RL+F + ++VS+N++IDG +NGE+ A F +M V N
Sbjct: 280 MYFKCGEVETGRLVFQRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVS 339
Query: 61 IAGYVA----VGDLEAA---NELFERMP-DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ G + +GDLE + L ++M +V N +I + V +A F+ +
Sbjct: 340 MMGALHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLE 399
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ V+WN+M+ + + E L +F M G P+ T VSV+TA A L
Sbjct: 400 GKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQG-IKPDSFTFVSVITALADLSVTRQAK 458
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
W+H N+ +V ++T L+ MY KCGA++ AR++FD M R+V++WN+MI GYG HG
Sbjct: 459 WIHGLAIRTNMDTNVFVATALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHG 518
Query: 233 NGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G+ AL+LF +M+ + KPND TF+ V+SAC+H+G V EG +YF +M+ Y +EP ++H
Sbjct: 519 LGKAALDLFDDMQNEASLKPNDITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDH 578
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
YG +VDLL RAG + ++ + I + +K C H + ELGE A RL EL
Sbjct: 579 YGAMVDLLGRAGKLDDAWKFIHEMPIK-PGITVLGAMLGACKIHKNIELGEKAADRLFEL 637
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
+P + G Y++++N YA+ WD V +VR + +KGL K S+V + ++ + +
Sbjct: 638 DPDEGGYYMLVANMYASASMWDKVAKVRTAMEKKGLHKTPGCSLVEWRNEVHAFYSGSTN 697
Query: 412 VHRKRIMYSMLSELGAHIK 430
+ + +Y+ L LG I+
Sbjct: 698 HPQSKRIYAFLETLGDEIR 716
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 147/290 (50%), Gaps = 9/290 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDV 54
++ FG +++A +FDS T V Y++++ G+VKN + F M PV
Sbjct: 78 LFCKFGTINEALRVFDSVETKLDVLYHTLLKGYVKNSSLSESLSFFKRMQNDEVEPVVYD 137
Query: 55 WNWNCMIAG--YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ + + G + +E L + + ++ + +++ + + A + F RMP
Sbjct: 138 FTYLLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMP 197
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R++V WN+++A + + + LK+ +M E G+ + TLVSVL A A + L +G
Sbjct: 198 ERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKA-DSITLVSVLPAVADVKGLRIGR 256
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
VH + V +ST LL MY KCG ++ R VF M +NVVSWN++I G +G
Sbjct: 257 SVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDGLAQNG 316
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
E+A FL+M ++ +P + + + L AC++ G + G + L+ ++
Sbjct: 317 ESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQM 366
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 236/438 (53%), Gaps = 10/438 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+YS G V+ ARLLF DL++YN+MI G NG T + KLF E+ +
Sbjct: 253 LYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSST 312
Query: 61 IAGYVAV----GDLEAANELFERMPDRDVVSWNCMIDGCVRVGN----VPLALEFFNRMP 112
I G + + G L A + ++ + + N + LA F+ P
Sbjct: 313 IVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESP 372
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ VV+WN+M++ + + S + +F EMM++ E PN T+ ++L+ACA LG LS G
Sbjct: 373 EKTVVAWNAMISGYTQNGSTETAISLFKEMMKT-EFTPNAVTITTILSACAQLGSLSFGK 431
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
WVH IKS N++ ++ +ST L+ MY KCG + A +FD M +N V+WN+MI GYGLHG
Sbjct: 432 WVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHG 491
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G +AL+L+ EM G P+ TF+ VL AC+HAG+V EG F M Y IEP +EHY
Sbjct: 492 YGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHY 551
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VD+L R+G ++ + E IK + V+ C H D+++ + ++RL EL+
Sbjct: 552 ACMVDILGRSGQLEKALEFIKKMPVE-PGPAVWGTLLGACMIHKDTDIARLASERLFELD 610
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P +G Y++LSN Y+ + + +R +++++ L K +++ + + + S
Sbjct: 611 PGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSH 670
Query: 413 HRKRIMYSMLSELGAHIK 430
+Y+ L +L ++
Sbjct: 671 SHATDIYAKLEKLTGKMR 688
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 164/332 (49%), Gaps = 22/332 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y F RV AR +FD D V +N+MI+G VKN + +LF EM V
Sbjct: 152 LYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGV-----R 206
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSW---------NCMIDGCV----RVGNVPLALEF 107
+ L AA EL E + + ++ G + + G+V A
Sbjct: 207 VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLL 266
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWEC-LKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F R+ +++++N+M++ A EC +K+F E++ SGE V + +T+V ++ + G
Sbjct: 267 FRRINRPDLIAYNAMIS-GFTANGGTECSVKLFRELLFSGERV-SSSTIVGLIPLHSPFG 324
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L + +H F + I ++ +ST +Y K +DLAR +FDE P + VV+WN+MI
Sbjct: 325 HLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMIS 384
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
GY +G+ E A+ LF EM K PN T +LSAC G + G W L++ N+E
Sbjct: 385 GYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKS-ENLE 443
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
P + +VD+ A+ G + + +L +S K
Sbjct: 444 PNIYVSTALVDMYAKCGNISEAWQLFDSMSEK 475
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 122/274 (44%), Gaps = 38/274 (13%)
Query: 21 LDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM 80
DL + + T AR LF +P D++ +N ++ G+ ++ L+ +
Sbjct: 42 FDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHL 101
Query: 81 -------PDR------------------------------DVVSWNCMIDGCVRVGNVPL 103
PD +V + ++D + V
Sbjct: 102 RRNTNLSPDNFTYAFAVAACSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVY 161
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A + F+ MP R+ V WN+M+ V+ F + +++F EM+ G V + +T+ +VL A A
Sbjct: 162 ARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRV-DSSTVTAVLPAAA 220
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
L +L VGM + + T L+++Y KCG ++ AR +F + +++++N+
Sbjct: 221 ELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNA 280
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
MI G+ +G E +++LF E+ G + + +T V
Sbjct: 281 MISGFTANGGTECSVKLFRELLFSGERVSSSTIV 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A F +P ++ +N ++ S + ++ + + P+ T + AC+
Sbjct: 63 ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACS 122
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
+ L M +H+ + +V + + L+ +Y K + AR VFD MP R+ V WN+
Sbjct: 123 NDKHL---MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNT 179
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
MI G + + +++LF EM G + + +T VL A
Sbjct: 180 MINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPA 218
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 260/482 (53%), Gaps = 44/482 (9%)
Query: 1 MYSVFGR---VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM-------- 49
M +FG+ ++ AR LFD D+VS+++MI + +NG A LF +M
Sbjct: 248 MIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVD 307
Query: 50 ------------------------------PVRD-VWNWNCMIAGYVAVGDLEAANELFE 78
++D V N +I Y G++ A ++F
Sbjct: 308 EVVVVSAISACTSLSAVRMGRSVHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFS 367
Query: 79 RMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKM 138
D+VSWN MI G + G V A + F+ M ++VVSW++M++ + + F E + +
Sbjct: 368 GGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVAL 427
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F EM G P+E +VSV++AC H+ L +G W+H++I N V+V+L T L+ MY+
Sbjct: 428 FQEMQLLG-IRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYM 486
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
KCG ++ A +VF M + V +WN++I+G ++G EK+L +F +M+K PN+ TF+
Sbjct: 487 KCGCVENALEVFYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMG 546
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
VL AC H G+V EG YF M + + IEP V+HYGC+VDLL RAGL+K +EELI+ + +
Sbjct: 547 VLGACRHMGLVDEGRRYFSSMTQEHKIEPNVKHYGCMVDLLGRAGLLKEAEELIESMPM- 605
Query: 319 XXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERV 378
C H ++E+GE + ++LI+L+P G +++LSN YA++G W DV +
Sbjct: 606 APDVATWGALLGACRKHHNNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGDVLEI 665
Query: 379 RVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSIE 438
R ++ + G+ K S++ ++ + + + + + ML+E+ A +K+ I
Sbjct: 666 RGIMAQHGVVKMPGCSMIEANGIVHEFLAGDKTHPQIKDIEHMLNEVAAKLKIEGYAPIT 725
Query: 439 KD 440
+
Sbjct: 726 SE 727
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 173/329 (52%), Gaps = 39/329 (11%)
Query: 15 FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAAN 74
FDS D+ N++I+ + G +A K+F E V D+ +WN ++AGYV +GD+ A
Sbjct: 176 FDS----DVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLAGYVNLGDVVEAE 231
Query: 75 ELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE 134
++++MP R+ ++ N MI + G + A F+R+ +++VSW++M++ + + E
Sbjct: 232 CVYDKMPVRNTIASNSMIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEE 291
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF----------------- 177
L +F +M +G V +E +VS ++AC L + +G VH
Sbjct: 292 ALVLFVDMNANGVMV-DEVVVVSAISACTSLSAVRMGRSVHGLAAKIGIQDYVSLQNALI 350
Query: 178 --------------IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
I S + +D++ +++ Y+ CG ++ A+ +FD M ++VVSW++
Sbjct: 351 HLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSA 410
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH-AGMVMEGWWYFDLMRRV 282
MI GY HG +A+ LF EM+ G +P++ V V+SACTH A + + W + + +
Sbjct: 411 MISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAALDLGKWIHAYISKNE 470
Query: 283 YNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+N+ V +VD+ + G V+N+ E+
Sbjct: 471 FNV--NVILGTTLVDMYMKCGCVENALEV 497
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
+L+ FN + N WN+++ H+ + + F ++ P+ T +L +C
Sbjct: 97 SLKIFNHLHNPNTFIWNTIMRSHLELHNSPQQALNFYKLFLFQNTSPDHYTYPILLRSCT 156
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
G +H + DV + L+ +Y CG M A VF E V ++VSWN+
Sbjct: 157 ARVSEPEGKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNT 216
Query: 224 MIMGY 228
++ GY
Sbjct: 217 LLAGY 221
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 235/413 (56%), Gaps = 20/413 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNC 59
+Y+ GR+ AR++FD +VS+ +++ G+ +NGE A ++FD+M DV +W
Sbjct: 189 LYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWIS 248
Query: 60 MIA---GYVAVGDLEAANEL--------FERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
+++ Y V DLE L E PD ++S C G V +A FF
Sbjct: 249 LVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDL-LISLTAFYAKC---GEVTVAKSFF 304
Query: 109 NRMPARN-VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
++M N V+ WN+M++ + + E +++F M+ S P+ TL S + ACA +G
Sbjct: 305 DKMKTPNKVMMWNAMISGYAKNGHAEEAVELFQAMI-SRNIKPDSITLRSAVLACAQVGS 363
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L + W+ +++ + D+ ++T L+ MY KCG+++ AR VFD V++VV W++MIMG
Sbjct: 364 LKLAQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVESARLVFDRASVKDVVMWSAMIMG 423
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
YGLHG G +A+ L+ M+++G PND TF+ +L+AC+H+G++ +GW F MR + I+P
Sbjct: 424 YGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGLIKQGWELFHCMRD-FGIKP 482
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+ EHY C+VDLL RAG +K + I + ++ C H LGE A++
Sbjct: 483 RNEHYSCVVDLLGRAGYLKQAYVFILKMPIE-PGVSVWGALLSACKIHRCVTLGEYAAQK 541
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
L L+P + G Y+ LSN YA+ WD V +RV+++EKGL K SV+ + +
Sbjct: 542 LFSLDPYNTGHYVQLSNLYASSRMWDRVAYIRVLMKEKGLTKYLGYSVIDINE 594
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 1/182 (0%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+++ +G + A + F+ P ++ WN+++ + R + ++M+ M G P
Sbjct: 85 LVNQSSNLGQIFYARKLFDEFPDPDLFMWNAIIRTYSRNNMYRNVIEMYRWMKWVGLH-P 143
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
++ T VL AC+ L + VH+ + V + L+ +Y KCG + +AR VF
Sbjct: 144 DKFTFPCVLKACSELLDFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVF 203
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
D + R +VSW +++ GYG +G +AL +F +M K KP+ + V V+ A T +
Sbjct: 204 DRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLE 263
Query: 271 EG 272
+G
Sbjct: 264 QG 265
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
A+L+ T HL + VH+ + + ++ + L T L+ G + AR +FDE
Sbjct: 51 ASLIDNSTHITHLYQ------VHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDE 104
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
P ++ WN++I Y + +E++ M+ G P+ TF CVL AC+
Sbjct: 105 FPDPDLFMWNAIIRTYSRNNMYRNVIEMYRWMKWVGLHPDKFTFPCVLKACS 156
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 234/404 (57%), Gaps = 11/404 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G V DAR +FD + D+V++ +MI G+ K G AR LFD M R+ + W M
Sbjct: 159 MYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAKAGRMVDARFLFDNMGERNSFTWTTM 218
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN 120
+AGY GD++AA EL++ M +D V+W MI G ++GNV A F+ + V WN
Sbjct: 219 VAGYANYGDMKAAMELYDVMNGKDEVTWVAMIAGYGKLGNVSEARRIFDEI----TVPWN 274
Query: 121 -----SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
++LA + + E ++M+++M + V + A +V ++ACA L + + +
Sbjct: 275 PSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVA-MVGAISACAQLRDIRMSNSLT 333
Query: 176 SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
I+ + ++S L+ M KCG +DLA F+ M R++ ++++MI + HG +
Sbjct: 334 YNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQ 393
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
A++LFL+M+++G KPN TFV VL+AC+ +G++ EG +F +M +Y IEP EHY C+
Sbjct: 394 DAIDLFLKMQQEGLKPNQVTFVGVLNACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCM 453
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
VDLL RAG ++ + LIK S C + + ELGEI A+ L E++P D
Sbjct: 454 VDLLGRAGQLEKAYSLIKENSTS-ADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTD 512
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
G Y++L+NTYA+ +W+ E V+ ++ +KG++K + S + E
Sbjct: 513 SGNYVLLANTYASNDKWECAEEVKKLMSKKGMKKPSGYSWIQRE 556
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 7/182 (3%)
Query: 100 NVPLALEFFNRMP-ARNVVSWNSML-ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
N+ A + F+ MP N W S++ A F C+ F M + G +P+ T
Sbjct: 62 NLYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKG-ILPSGFTFSL 120
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
VL AC + G VH+ + + + ++ T LL MY KCG + ARDVFD + R+
Sbjct: 121 VLNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRD 180
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
VV+W +MI GY G A LF M ++ N T+ +++ + G + +D
Sbjct: 181 VVAWTAMICGYAKAGRMVDARFLFDNMGER----NSFTWTTMVAGYANYGDMKAAMELYD 236
Query: 278 LM 279
+M
Sbjct: 237 VM 238
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 233/400 (58%), Gaps = 3/400 (0%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G V DAR +FD + D+V++ +MI G+ K G AR LFD M R+ + W M
Sbjct: 159 MYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDNMGERNSFTWTTM 218
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR-NVVSW 119
+AGY GD++AA EL++ M ++ V+W MI G ++GNV A F+ +P N +
Sbjct: 219 VAGYANYGDMKAAMELYDVMNGKEEVTWVAMIAGYGKLGNVSEARRIFDEIPVPLNPSTC 278
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
++LA + + E ++M+++M + V + A +V ++ACA L + + + I+
Sbjct: 279 AALLACYAQNGHAREAIEMYEKMRRAKIKVTDVA-MVGAISACAQLRDIRMSNLLTYDIE 337
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+ ++S L+ M KCG +DLA F+ M R++ ++++MI + HG + A++
Sbjct: 338 EGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAID 397
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
LFL+M+++G PN TFV VL+AC+ +G++ EG +F +M VY IEP EHY C+VDLL
Sbjct: 398 LFLKMQQEGLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLL 457
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
RAG ++ + LIK S C + + ELGEI A+ L E++P D G Y
Sbjct: 458 GRAGQLEKAYSLIKENSTS-ADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNY 516
Query: 360 IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
++L+NTYA+ +W+ E V+ ++ +KG++K + S + E
Sbjct: 517 VLLANTYASNDKWERAEEVKKLMSKKGMKKPSGYSWIQRE 556
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 100 NVPLALEFFNRMP-ARNVVSWNSML-ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
N+ A + F+ MP N W S++ A F C+ F M + G +P+ T S
Sbjct: 62 NLYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKG-ILPSGFTFSS 120
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
VL AC + + G VH+ + + + ++ T LL MY KCG + ARDVFD M R+
Sbjct: 121 VLNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRD 180
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
VV+W +MI GY G A LF M ++ N T+ +++ + G + +D
Sbjct: 181 VVAWTAMICGYAKAGRMVDARLLFDNMGER----NSFTWTTMVAGYANYGDMKAAMELYD 236
Query: 278 LM 279
+M
Sbjct: 237 VM 238
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
++D + G V A + F+ M R+VV+W +M+ + +A + +FD M E
Sbjct: 156 LLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDNMGER----- 210
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
N T +++ A+ G + M ++ + N K +V ++ Y K G + AR +F
Sbjct: 211 NSFTWTTMVAGYANYGDMKAAMELYDVM---NGKEEVTW-VAMIAGYGKLGNVSEARRIF 266
Query: 211 DEMPVR-NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
DE+PV N + +++ Y +G+ +A+E++ +M + K D V +SAC
Sbjct: 267 DEIPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQ 322
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 226/392 (57%), Gaps = 5/392 (1%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVK-NGETGA--ARKLFDEMPVRDVWNWNCMIA 62
GRV +A+ +F+ ++VSY MIDG++K G +G AR LFD MP R+ +W MI+
Sbjct: 136 GRVEEAKKVFEEIPRPNVVSYTVMIDGYMKMEGGSGIKRARALFDAMPSRNEVSWTVMIS 195
Query: 63 GYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
G V G E A E+F RMP ++VV++ MI G + G + A F ++ ++ WN M
Sbjct: 196 GLVENGLHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIRCKDRACWNIM 255
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ + E L +F +M+ +G P++ T VS+ TACA L L G ++ +
Sbjct: 256 ITGFAQNGRGEEALNLFSQMVRTGMQ-PDDLTFVSLFTACASLALLDEGRQTNALAIKHG 314
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
+ D+ +S L+TMY KCG + ++ FD++ ++VSWN++I + HG ++A F
Sbjct: 315 LNSDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHGLYDRARYYFD 374
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
M G P+ TF+ +LSAC AG V E FDLM Y I P+ EHY C+VD+++RA
Sbjct: 375 HMVTAGVTPDGITFLNLLSACCRAGKVDETVNLFDLMVHKYGILPRSEHYSCVVDVMSRA 434
Query: 303 GLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIML 362
G + + ++I+ + + C H + +LGE+ A+ ++ L+P + G Y+M+
Sbjct: 435 GQLLRACKVIQEMPFE-ADASIWGAFLVGCNIHSNVKLGELAARSILNLDPYNSGAYVMM 493
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
SN YAA G+W DV R+RV+++E+G++K+ A S
Sbjct: 494 SNIYAAAGKWKDVNRMRVLMKEQGIKKQTAYS 525
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 146/270 (54%), Gaps = 12/270 (4%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G ++ AR LFD + D+V+YNSM+ + +NG ++ LF+ +P++++ +WN +I +
Sbjct: 43 GNITAARQLFDKTSQKDIVTYNSMLTAYWQNGFLQHSKSLFNSIPIKNIVSWNSIITACI 102
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
++ A F MP+++V S+N M+ G V++G V A + F +P NVVS+ M+
Sbjct: 103 QNDNINDAFSYFTAMPEKNVASYNAMMSGFVKMGRVEEAKKVFEEIPRPNVVSYTVMIDG 162
Query: 126 HVR---AKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+++ +FD M NE + +++ G L W F++
Sbjct: 163 YMKMEGGSGIKRARALFDAMPSR-----NEVSWTVMISGLVENG-LHEEAW-EVFVRMP- 214
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
+ +V+ T ++T + K G +D A ++F ++ ++ WN MI G+ +G GE+AL LF
Sbjct: 215 -QKNVVAFTAMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQNGRGEEALNLFS 273
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+M + G +P+D TFV + +AC ++ EG
Sbjct: 274 QMVRTGMQPDDLTFVSLFTACASLALLDEG 303
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 18/242 (7%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNV 101
A +LF +DV+ N I G++ AA +LF++ +D+V++N M+ + G +
Sbjct: 19 ATRLFSTQ--QDVYFANLNITALSRAGNITAARQLFDKTSQKDIVTYNSMLTAYWQNGFL 76
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
+ FN +P +N+VSWNS++ ++ + + F M E N A+ ++++
Sbjct: 77 QHSKSLFNSIPIKNIVSWNSIITACIQNDNINDAFSYFTAMPEK-----NVASYNAMMSG 131
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC---GAMDLARDVFDEMPVRNV 218
+G++ V I N V+ T ++ Y+K + AR +FD MP RN
Sbjct: 132 FVKMGRVEEAKKVFEEIPRPN----VVSYTVMIDGYMKMEGGSGIKRARALFDAMPSRNE 187
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL 278
VSW MI G +G E+A E+F+ M P+ N F +++ G + E W F
Sbjct: 188 VSWTVMISGLVENGLHEEAWEVFVRM----PQKNVVAFTAMITGFCKQGKIDEAWNLFQQ 243
Query: 279 MR 280
+R
Sbjct: 244 IR 245
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 220/381 (57%), Gaps = 12/381 (3%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N +I + G +E A +F+ DRD SWN MI V GN+ LA E F+ M R+VV
Sbjct: 150 NALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVV 209
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SW++++A +V+ F E L F +M++S E PNE T+VS L AC++L L G W+H +
Sbjct: 210 SWSTIIAGYVQVGCFMEALDFFHKMLQS-EVKPNEYTMVSALAACSNLVALDQGKWIHVY 268
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGNGEK 236
I+ +NIK++ L L+ MY KCG +D A VF E V R V WN+MI G+ +HG E+
Sbjct: 269 IRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEE 328
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
A+ +F +M+ + PN TF+ +L+AC+H MV EG YF+LM Y I P++EHYGC+V
Sbjct: 329 AINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMV 388
Query: 297 DLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDI 356
DLL+R+G +K+SEE+I + + C + D E G + + + E++P I
Sbjct: 389 DLLSRSGHLKDSEEMILSMPM-APDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHI 447
Query: 357 GPYIMLSNTYAAQGRWDDVERVRVMIREKG-----LQKEAASSVVHLEDFESKYFVKNYS 411
G ++L N Y+ GRW++ M+REK +K S + L ++ V + S
Sbjct: 448 GCNVLLGNIYSTSGRWNEAR----MVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDRS 503
Query: 412 VHRKRIMYSMLSELGAHIKLS 432
+ R +YS L E+ + +K++
Sbjct: 504 HPQSREIYSFLDEMISKLKIA 524
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 33/255 (12%)
Query: 96 VRVGNVPLALEFFNRMPARNVVSWNSMLALH-VRAKSFWECLKMFDEMMESGEAVPNEAT 154
V + ++ A + F+++P ++ +N+M+ H + S+ + + +F ++ PN +
Sbjct: 54 VALASLTYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYS 113
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
V AC + + G V + + +V + L+ M+ K G ++ AR+VFD
Sbjct: 114 FVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAV 173
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG-------------------------- 248
R+ SWN+MI Y GN A ELF EM ++
Sbjct: 174 DRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHK 233
Query: 249 -----PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
KPN+ T V L+AC++ + +G W +RR NI+ ++D+ A+ G
Sbjct: 234 MLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRD-NIKMNDRLLASLIDMYAKCG 292
Query: 304 LVKNSEELIKYVSVK 318
+ ++ + VK
Sbjct: 293 EIDSASSVFHEHKVK 307
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 119/252 (47%), Gaps = 24/252 (9%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNCMIAGY 64
G + A+ LFD D+VS++++I G+V+ G A F +M +V N M++
Sbjct: 191 GNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSAL 250
Query: 65 VAVGDLEAANE-----LFER-----MPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA- 113
A +L A ++ ++ R M DR + S +ID + G + A F+
Sbjct: 251 AACSNLVALDQGKWIHVYIRRDNIKMNDRLLAS---LIDMYAKCGEIDSASSVFHEHKVK 307
Query: 114 RNVVSWNSML---ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
R V WN+M+ A+H + + E + +F E M+ + PN+ T +++L AC+H +
Sbjct: 308 RKVWPWNAMIGGFAMHGKPE---EAINVF-EKMKVEKVSPNKVTFIALLNACSHGYMVKE 363
Query: 171 GMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGY 228
G + S+ I ++ C++ + + G + + ++ MP+ +V W +++
Sbjct: 364 GKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNAC 423
Query: 229 GLHGNGEKALEL 240
++ + E+ +
Sbjct: 424 RIYKDMERGYRI 435
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 236/416 (56%), Gaps = 37/416 (8%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
L D ++DG+ + G+ +A KLFD+MP + + ++ M+ Y G L A LF+
Sbjct: 149 LCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFD 208
Query: 79 RMP-DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
M +RDVV WN MIDG + G F N ECL
Sbjct: 209 GMEGNRDVVVWNVMIDGYAQNG-------FPN------------------------ECLL 237
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN---IKVDVLLSTCLL 194
+F M+ + PN TL+ VL++C +G L G WVHS+IK+ + V+V + T L+
Sbjct: 238 LFRRMLVE-KVKPNVITLLPVLSSCGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALV 296
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA 254
MY KCG+++ AR VFD++ ++VV+WNSMIMGY ++G E+AL+LF EM +G +P+
Sbjct: 297 DMYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSEEALKLFHEMHGEGVRPSYV 356
Query: 255 TFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKY 314
TF+ +L+AC H+G+V +GW F+LM+ Y +EP+VEH+GC+V+LL RAG ++ + +L++
Sbjct: 357 TFIALLTACGHSGLVTKGWEMFNLMKNEYKMEPRVEHFGCMVNLLGRAGRLQEAYDLVRS 416
Query: 315 VSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDD 374
+ + C H + LGE +A+ L+ + G Y++LSN YAA G WD
Sbjct: 417 MKID-PDPVIWGTLLWACRLHNNISLGEEIAEFLLSNDLASSGTYVLLSNIYAAAGNWDG 475
Query: 375 VERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
+VR ++++ G++KE S++ + + ++ + + + +Y ML E+ + +K
Sbjct: 476 AAKVRSLMKDSGVEKEPGCSIIEVNNRVHEFIAGDLKHPKSKDIYLMLEEMNSWLK 531
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 128/260 (49%), Gaps = 22/260 (8%)
Query: 2 YSVFGRVSDARLLFDS-SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
Y+ G++ +ARLLFD D+V +N MIDG+ +NG LF M V +V
Sbjct: 194 YAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVIT 253
Query: 57 WNCMIAGYVAVGDLEAANELFERMPD-------RDVVSWNCMIDGCVRVGNVPLALEFFN 109
+++ VG LE+ + + + +V ++D + G++ A + F+
Sbjct: 254 LLPVLSSCGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFD 313
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV-PNEATLVSVLTACAHLGKL 168
++ ++VV+WNSM+ + E LK+F EM GE V P+ T +++LTAC H G +
Sbjct: 314 KIDGKDVVAWNSMIMGYAVNGLSEEALKLFHEM--HGEGVRPSYVTFIALLTACGHSGLV 371
Query: 169 SVGMWVHSFIKSNNIKVDVLLS--TCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMI 225
+ G + + +K N K++ + C++ + + G + A D+ M + + V W +++
Sbjct: 372 TKGWEMFNLMK-NEYKMEPRVEHFGCMVNLLGRAGRLQEAYDLVRSMKIDPDPVIWGTLL 430
Query: 226 MGYGLHGN---GEKALELFL 242
LH N GE+ E L
Sbjct: 431 WACRLHNNISLGEEIAEFLL 450
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 37/209 (17%)
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
+G++ ++ FNR R+V +W S++ H ++K + L + +M+ + PN T S
Sbjct: 69 LGHLNYSVTLFNRTRNRDVYTWTSIIHAHTQSKLNDQALSYYAQML-THRIQPNAFTFSS 127
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-- 215
+L + +H + + D ++T L+ Y + G A +FD+MP
Sbjct: 128 LLNGST----IQPIKSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKS 183
Query: 216 ------------------------------RNVVSWNSMIMGYGLHGNGEKALELFLEME 245
R+VV WN MI GY +G + L LF M
Sbjct: 184 LISFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRML 243
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWW 274
+ KPN T + VLS+C G + G W
Sbjct: 244 VEKVKPNVITLLPVLSSCGQVGALESGRW 272
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 241/468 (51%), Gaps = 41/468 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY G + R +FD +LV YN+++ +V++G G + DEM + D
Sbjct: 277 MYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVT 336
Query: 57 WNCMIAGYVAVGDL-----------------------------------EAANELFERMP 81
IA +GDL EAA ++F+ M
Sbjct: 337 MLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMS 396
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
++ VV+WN +I G VR G + LAL F MP N+VSWN+M+ V+A F E + + E
Sbjct: 397 NKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLRE 456
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M G + T+V + +AC +LG L + W++++I+ N+I +D+ L T L+ M+ +CG
Sbjct: 457 MQNQG-IKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCG 515
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
A VF+ M R+V +W + I + GN + A+ELF EM K+ K +D FV +L+
Sbjct: 516 DPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLT 575
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
A +H G V +G F M +++ + P++ HYGC+VDLL RAGL++ + +L+K + +K
Sbjct: 576 AFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIK-PN 634
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
C H + E +++ +L P +G +++LSN YA+ G+W+DV RVR+
Sbjct: 635 DVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQ 694
Query: 382 IREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHI 429
++EKG QK A SS + + ++ + S + ML E+ I
Sbjct: 695 MKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRI 742
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 152/295 (51%), Gaps = 24/295 (8%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM--------PVRD 53
Y+ G+V R +FD L ++VS+ S+I+G+ A LF EM PV
Sbjct: 177 YAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTM 236
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDRDVVS----WNCMIDGCVRVGNVPLALEFFN 109
V C I+ + DLE ++ M + V S N ++D ++ G++ E F+
Sbjct: 237 V----CAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFD 292
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+N+V +N++++ +V+ E L + DEM++ G+ P++ T++S + ACA LG LS
Sbjct: 293 EFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQR-PDKVTMLSTIAACAQLGDLS 351
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
VG H+++ N ++ +S ++ MY+KCG + A VFD M + VV+WNS+I G
Sbjct: 352 VGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLV 411
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN 284
G E AL +F EM P+ N ++ ++ A A M E DL+R + N
Sbjct: 412 RDGELELALRIFGEM----PESNLVSWNTMIGAMVQASMFEEA---IDLLREMQN 459
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 1/185 (0%)
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
+D+ N +I G V L + F+ M RNVVSW S++ + E + +F EM
Sbjct: 165 KDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEM 224
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
+E G PN T+V ++ACA L L +G V + + +K + L+ LL MY+KCG
Sbjct: 225 VEVG-VEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGD 283
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
M R++FDE +N+V +N+++ Y HG + L + EM +KG +P+ T + ++A
Sbjct: 284 MYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAA 343
Query: 263 CTHAG 267
C G
Sbjct: 344 CAQLG 348
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 5/194 (2%)
Query: 75 ELFERMPDRDVVSWNCMIDGCVRVG---NVPLALEFFNRMPAR--NVVSWNSMLALHVRA 129
+L M + V + N +I CV++G ++ AL F ++ + N+++ + +
Sbjct: 50 QLHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAAS 109
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E + ++ M+ VP+ T +L+AC+ + S G+ VH + + D+ +
Sbjct: 110 GLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFV 169
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
+ L+ Y CG +DL R VFDEM RNVVSW S+I GY + ++A+ LF EM + G
Sbjct: 170 ANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGV 229
Query: 250 KPNDATFVCVLSAC 263
+PN T VC +SAC
Sbjct: 230 EPNPVTMVCAISAC 243
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 220/390 (56%), Gaps = 10/390 (2%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
++ + L D++ N +ID + K G A ++FD M RDV +W MI G+ G +E
Sbjct: 141 MICEMGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCNTGRIEE 200
Query: 73 ANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLA 124
A LFERM + + +WN +I R+G+ A F RM +VV+WN++++
Sbjct: 201 ALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNALIS 260
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
+ F E +F EM+ SG PN+ T+ ++L AC +G + G VH FI
Sbjct: 261 GFAQNHQFRETFTVFREMLVSG-ICPNQVTIAALLPACGSVGSVKWGREVHGFICRKGFD 319
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
+V +++ L+ MY KCG++ AR+VFD++ +NV SWN+MI +G G + ALELF +M
Sbjct: 320 ANVFIASALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKM 379
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
+++G +PN+ TF C+LSAC+H+G V +G F LM+ Y +E EHY CIVDLL R+G
Sbjct: 380 KEEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYACIVDLLCRSGK 439
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSN 364
+ + E IK + ++ C H +L + +A+ ++ ++ G ++ LSN
Sbjct: 440 IVEAYEFIKAMPIQ-VTESIAGAFLNGCKIHGRKDLAKKMAEEIMRMQLNGSGSFVTLSN 498
Query: 365 TYAAQGRWDDVERVRVMIREKGLQKEAASS 394
YAA+G W++ VR +++E+ + K SS
Sbjct: 499 IYAAEGDWEEAGNVRKVMKERNVNKWPGSS 528
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
++ Y + DL++A LF + +V ++N MI G V G AL +F
Sbjct: 56 LVGMYSSCTDLKSATLLFHNIHKPNVFAFNWMILGMVYNGYFDNALFYF----------- 104
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
+M + N+ T V+ C L + G VH I
Sbjct: 105 ---------------------RLMRDIGLIGNKFTFGIVIKTCVGLMDMKKGKQVHGMIC 143
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+ DVL+ L+ MY KCG++D A VFD M R+V SW SMI G+ G E+AL
Sbjct: 144 EMGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALV 203
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
LF M+ +G +PND T+ +++ G + + + + M++
Sbjct: 204 LFERMKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQK 245
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----N 56
MYS G + DAR +FD ++ S+N+MID K G +A +LF +M +
Sbjct: 331 MYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVT 390
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVS-----WNCMIDGCVRVGNVPLALEFFNRM 111
+ C+++ G +E E+F M + V + C++D R G + A EF M
Sbjct: 391 FACILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYACIVDLLCRSGKIVEAYEFIKAM 450
Query: 112 PAR 114
P +
Sbjct: 451 PIQ 453
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 238/482 (49%), Gaps = 44/482 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G + DA++LFD DL S+N+MI G+ G ARKLFDEMP RD ++WN +
Sbjct: 107 MYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAV 166
Query: 61 IAGYVAVGDLEAANELFERMPDR------------------------------------- 83
I+GYV+ G A +LF M +
Sbjct: 167 ISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSG 226
Query: 84 ---DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
D V W ++D + G++ A F++M +++VSW +M+ E +F
Sbjct: 227 LELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFR 286
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
++M SG PNE T VL ACA L +G VH ++ ++ L+ +Y KC
Sbjct: 287 DLMGSG-VRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKC 345
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G + AR VF++MP ++VSW S+I+GY +G + AL+ F + + G KP++ TFV VL
Sbjct: 346 GNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVL 405
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXX 320
SACTHAG+V G YF ++ + + +HY C++DLLAR+G K +E +I + +K
Sbjct: 406 SACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMK-P 464
Query: 321 XXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRV 380
C H + EL E AK L ELEP + YI LSN YA G W + +VR
Sbjct: 465 DKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRN 524
Query: 381 MIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSIEKD 440
+ +G+ K+ S + ++ + V + S + ++ L EL K+ G +
Sbjct: 525 DMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSK--KMKEEGYVADT 582
Query: 441 NF 442
NF
Sbjct: 583 NF 584
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 121/225 (53%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N +I Y G L A LF+ +P +D+ SWN MI G VG + A + F+ MP R+
Sbjct: 102 NRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNF 161
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SWN++++ +V + E L +F M E+ + N TL S L A A + L G +H +
Sbjct: 162 SWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGY 221
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ + +++D ++ T LL +Y KCG+++ AR +FD+M +++VSW +MI G ++
Sbjct: 222 LIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEG 281
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
LF ++ G +PN+ TF VL+AC G M RV
Sbjct: 282 FSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRV 326
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV--------PNEATLVSVLTACAHLG 166
N+ ++ L+ H + F E +++F + EAV P+ +++ AC
Sbjct: 18 NLNPKDTTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHR 77
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
KL +G VH+ K++N +++S L+ MY KCG++ A+ +FDE+P +++ SWN+MI
Sbjct: 78 KLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMIS 137
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
GY G E+A +LF EM P ++ ++ V+S G ME F +M+
Sbjct: 138 GYANVGRIEQARKLFDEM----PHRDNFSWNAVISGYVSQGWYMEALDLFRMMQ 187
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 225/436 (51%), Gaps = 41/436 (9%)
Query: 29 MIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDR----D 84
+ID + K+G+ A K+F + DV +W MIAGY A LF+ M D+ D
Sbjct: 527 LIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSD 586
Query: 85 VVSWNCMIDGCV-----------------------------------RVGNVPLALEFFN 109
+ + I C R G V A F+
Sbjct: 587 NIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFD 646
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
++ A++ VSWNS+++ ++ F E L +F +M ++G + N T S ++A A++ +
Sbjct: 647 QIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEI-NSFTFGSAVSAAANIANVR 705
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
+G +H I+ + +S L+T+Y KCG +D A F EMP +N +SWNSMI GY
Sbjct: 706 IGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYS 765
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
HG G +AL+LF +M++ PN TFV VLSAC+H G+V EG YF M +N+ PK
Sbjct: 766 QHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKP 825
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHY C+VDLL R+GL+ ++ ++ + ++ C H + ++GE A L+
Sbjct: 826 EHYACVVDLLGRSGLLSRAKRFVEEMPIQ-PDAMVWRTLLSACNVHKNIDIGEFAASHLL 884
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKN 409
ELEP D Y+++SN YA G+WD +R R M++++G++KE S V +++ +F +
Sbjct: 885 ELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGD 944
Query: 410 YSVHRKRIMYSMLSEL 425
+ R ++Y L L
Sbjct: 945 QNHPRADMIYEYLRGL 960
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 134/286 (46%), Gaps = 21/286 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+YS G +S A +F D VSYNS+I G + G A LF +M N +C
Sbjct: 328 LYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKM------NLDCQ 381
Query: 61 IAGYVAVGDLEAANELFERMPD--------------RDVVSWNCMIDGCVRVGNVPLALE 106
V V L +A +P+ D+V ++D V+ ++ A E
Sbjct: 382 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 441
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
FF NVV WN ML + + + + ++F +M G VPN+ T S+L C LG
Sbjct: 442 FFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEG-IVPNQFTYPSILKTCTTLG 500
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
+G +H+ + + +V +S+ L+ MY K G +D A +F + +VVSW +MI
Sbjct: 501 ATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIA 560
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
GY H +AL LF EM+ +G K ++ F +SAC + +G
Sbjct: 561 GYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQG 606
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 40/280 (14%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N +ID + KNG +A+K+F+ + RD +W MI+G G E A LF +M +
Sbjct: 222 NPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGIC 281
Query: 87 S----WNCMIDGCVRV-----------------------------------GNVPLALEF 107
++ ++ C +V GN+ A +
Sbjct: 282 PTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQI 341
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+ M R+ VS+NS+++ + L +F +M + P+ T+ S+L+ACA +G
Sbjct: 342 FHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQK-PDCVTVASLLSACASVGA 400
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L G HS+ + D+++ LL +YVKC + A + F NVV WN M++G
Sbjct: 401 LPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVG 460
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
YG N K+ ++F +M+ +G PN T+ +L CT G
Sbjct: 461 YGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLG 500
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 134/324 (41%), Gaps = 42/324 (12%)
Query: 29 MIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV--- 85
+ID ++ G+ A +FDEMP+R + WN + ++A + LF RM ++V
Sbjct: 122 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 181
Query: 86 ---------------VSW----------------------NCMIDGCVRVGNVPLALEFF 108
VS+ N +ID + G + A + F
Sbjct: 182 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 241
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
+ AR+ VSW +M++ + E + +F +M SG P SVL+AC +
Sbjct: 242 ENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSG-ICPTPYIFSSVLSACTKVEFF 300
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
G +H + + + L+T+Y + G + A +F M R+ VS+NS+I G
Sbjct: 301 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 360
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
G +AL LF +M KP+ T +LSAC G + G + + +
Sbjct: 361 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKA-GMTSD 419
Query: 289 VEHYGCIVDLLARAGLVKNSEELI 312
+ G ++DL + +K + E
Sbjct: 420 IVVEGSLLDLYVKCSDIKTAHEFF 443
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 233/430 (54%), Gaps = 34/430 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y G V AR +FD ++VS+NS++ G++K G ++ FDE+P++DV +WNCM
Sbjct: 148 LYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPLKDVISWNCM 207
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV--- 117
++GY G ++ A LF++MP+R+ SWN MI G V G++ A E F+ MP RN V
Sbjct: 208 VSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMPRRNSVSLI 267
Query: 118 ----------------------------SWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
S+N+M+A + ++ E L +F+ M++ ++
Sbjct: 268 TMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSL 327
Query: 150 -PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
P++ TL SV++AC+ LG L W+ S I + I +D L+T L+ +Y KCG++D A +
Sbjct: 328 HPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAYE 387
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
+F + R+VV++++MI G G++G A+ELF M + PN T+ +L+A HAG+
Sbjct: 388 LFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGL 447
Query: 269 VMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXX 328
EG+ F M+ I P V+HYG +VDLL RAG + + +LI + ++
Sbjct: 448 AEEGYRCFISMKD-NGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMPMQ-PNVGVWGAL 505
Query: 329 XXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQ 388
C H + +LGEI + I+LE G Y +LS YA G+W+D +++ + K +
Sbjct: 506 LLACRLHDNLKLGEIAVQHCIKLESETAGYYSLLSGIYATVGKWNDAKKLTTGVEGKKII 565
Query: 389 KEAASSVVHL 398
K S L
Sbjct: 566 KIPGCSWTQL 575
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 140/287 (48%), Gaps = 43/287 (14%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
+++D + K G+ ARK+FDEMP ++V +WN +++GY+ G+L+ F+ +P +DV+
Sbjct: 143 TALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPLKDVI 202
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
SWNCM+ G + G + A F +MP RN SWN+M+ +V S E ++FD M
Sbjct: 203 SWNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMPRR- 261
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
N +L++++ Y K G + A
Sbjct: 262 ----NSVSLITMIAG-----------------------------------YSKSGDVHSA 282
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPK--PNDATFVCVLSACT 264
R++FD+M ++++S+N+MI Y ++AL+LF M K P+ T V+SAC+
Sbjct: 283 RELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACS 342
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
G +E W + + + I ++DL A+ G + + EL
Sbjct: 343 QLGN-LEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAYEL 388
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 7/190 (3%)
Query: 90 CMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
C I + N L++ R P + SW ++ + F E + ++ +M G
Sbjct: 45 CDITNYKTISNYILSILHHLRNP--DSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIG-LC 101
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
P+ + S+L +CA + G+ +H + V + T LL +Y K G + AR V
Sbjct: 102 PSSHAVSSILKSCARVEDDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKV 161
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
FDEMP +NVVSWNS++ GY GN ++ F E+ P + ++ C++S AG +
Sbjct: 162 FDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEI----PLKDVISWNCMVSGYAKAGKM 217
Query: 270 MEGWWYFDLM 279
+ F M
Sbjct: 218 DRACYLFQQM 227
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/462 (32%), Positives = 234/462 (50%), Gaps = 49/462 (10%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
LLF L LD+ ++++ ++K A ++F+E+PVRDV WN M+ GY +G E
Sbjct: 158 LLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGCFEE 217
Query: 73 ANELFERMPDRDVVSWNCMIDGCVRVGNV------------------------------- 101
A +F RM + VV + G + + +V
Sbjct: 218 ALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNALID 277
Query: 102 --------PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
AL F M +++ SWNS++++H R + LK+FD M+ + P+
Sbjct: 278 MYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRML-GNKVQPDLV 336
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFI--------KSNNIKVDVLLSTCLLTMYVKCGAMDL 205
T+ +VL AC HL L G +H ++ NN DVLL+ L+ MY KCG+M
Sbjct: 337 TVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRD 396
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
AR VFD M ++V SWN MI GYG+HG G++AL+ F M + PN+ +FV +LSAC+H
Sbjct: 397 ARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSACSH 456
Query: 266 AGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXX 325
AGMV EG + M Y + P VEHY C++D+L RAG + + +L+ + K
Sbjct: 457 AGMVKEGLEFLAEMDSKYGVPPSVEHYTCVIDMLCRAGKLVEAYDLMLTMPFK-ADPVGW 515
Query: 326 XXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREK 385
C + D++L EI A ++IELEP G Y+++SN Y GR++ V +R +R++
Sbjct: 516 RALLAACRIYKDTDLAEIAASKVIELEPGHCGNYVLMSNVYGVVGRYEQVSELRHTMRQQ 575
Query: 386 GLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGA 427
++K S + L + + + + + +Y+ L+ L A
Sbjct: 576 NVKKRPGCSWIELMNGVHVFLTGDRTHPQTDFIYAGLNSLTA 617
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 127/260 (48%), Gaps = 10/260 (3%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMP-----VRDVWNWNCMIAGYVAVGDLEAANE- 75
++ +YN++I G V NG + + L+ +M + D + + C+I GD+ +
Sbjct: 96 NVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKKI 155
Query: 76 ---LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSF 132
LF+ + DV + ++ ++ V A E F +P R+VV WNSM+ + + F
Sbjct: 156 HGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGCF 215
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
E L MF M+E+G VP T+ VL+ + +G G VH F+ V++
Sbjct: 216 EEALGMFRRMVENG-VVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNA 274
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
L+ MY KC A +VF+ M +++ SWNS+I + G+ L+LF M +P+
Sbjct: 275 LIDMYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPD 334
Query: 253 DATFVCVLSACTHAGMVMEG 272
T VL ACTH +M G
Sbjct: 335 LVTVTTVLPACTHLAALMHG 354
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 4/161 (2%)
Query: 104 ALEFFNRMPA---RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
AL+ FN P +NV ++N+++A V ++ +M G +P++ T V+
Sbjct: 83 ALKVFN-YPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIR 141
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
AC G + +H + +++DV + + L+T Y+K + A +VF+E+PVR+VV
Sbjct: 142 ACGDAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVL 201
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
WNSM+ GY G E+AL +F M + G P T VLS
Sbjct: 202 WNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLS 242
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
T ++ L CA L+ G +H+ + N L T ++ MY KC ++ A VF+
Sbjct: 30 GTCITSLQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFN- 88
Query: 213 MPV---RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPK-PNDATFVCVLSACTHAGM 268
P +NV ++N++I G+ +G + + L+ +M G P+ TF CV+ AC AG
Sbjct: 89 YPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGD 148
Query: 269 VME 271
V E
Sbjct: 149 VFE 151
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 152/456 (33%), Positives = 244/456 (53%), Gaps = 39/456 (8%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L + L D+ NS + + G+T A K+FD MPVRDV +W +I+GY+ G
Sbjct: 134 LAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFND 193
Query: 73 ANELFERM---PD---------------------------------RDVVSWNCMIDGCV 96
A LF RM P+ +++V N ++D V
Sbjct: 194 AVALFLRMDVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYV 253
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
+ +V A F+ +P +++VSW SM++ V+ + E L +F EM+ SG P+ L
Sbjct: 254 KCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFE-PDGVILT 312
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
SVL+ACA LG L G WVH +I + IK DV + T L+ MY KCG +++A+ +F+ +P +
Sbjct: 313 SVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSK 372
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
N+ +WN+ I G ++G+G++AL+ F + + G +PN+ TF+ V SAC H+G+V EG YF
Sbjct: 373 NIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYF 432
Query: 277 DLMRR-VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTH 335
M YN+ P +EHYGC+VDLL RA LV+ + ELI + + +T+
Sbjct: 433 KQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGALLSAS-STY 491
Query: 336 MDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSV 395
+ EL + K + E + G Y++LSN YA +W +V VR +++EKG+ K SS+
Sbjct: 492 GNVELTPEMLKTVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSSL 551
Query: 396 VHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKL 431
+ ++ K+ V + + + ++ +L+ L L
Sbjct: 552 IRVDGKSHKFVVGDNNHPQSEDIHVLLNILANQTYL 587
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
W ++++ ++ +G VP+ T+ +VL +CA ++ +H+ ++ D+ +
Sbjct: 91 WAAIRIYRWVVGNG-FVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNS 149
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
+ +Y CG A VFD MPVR+VVSW +I GY G A+ LFL M+ PN
Sbjct: 150 FVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRMDV---APN 206
Query: 253 DATFVCVLSACTHAGMVMEG 272
ATFV +L AC G + G
Sbjct: 207 AATFVSILGACGKLGCLNLG 226
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 234/423 (55%), Gaps = 20/423 (4%)
Query: 21 LDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDL-EAANELFER 79
++VS + D VK G TG +V+ N +I Y D+ E A +FE
Sbjct: 124 FNIVSGVQVHDHVVKLGYTG------------NVFVRNALIHFYFEGFDVSEYAKRVFEE 171
Query: 80 MPDR---DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECL 136
D DVV+WN M+ G VR G V A + F+ MP R+VVSW+SM+ +V+ + L
Sbjct: 172 EVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGL 231
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTM 196
+ F M E G PNE+ LV++L+A A LG L G +VHS I+S ++ V + T L+ M
Sbjct: 232 ECFRLMREKG-IRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGTGLVDM 290
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
Y KCG ++ +RD+FD M R++ +W MI G H ++AL LF E ++G +P + F
Sbjct: 291 YAKCGCIEESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRPVNVIF 350
Query: 257 VCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
V VL+AC+ AG+V EG +YF LM Y I P++EHYGC+VDL ARAGL+ + LI+ ++
Sbjct: 351 VGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVRLIETMT 410
Query: 317 VKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVE 376
V+ C H E+GE + +LI+++P G Y+ L+ YA +WDDV
Sbjct: 411 VE-PDPVMWATLLDACEIHGFVEMGEKIGNKLIKMDPTHDGHYVQLAGIYAKSRKWDDVV 469
Query: 377 RVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGS 436
RVR ++ E+ K A S++ +ED ++ + +Y ML +G + +S AG
Sbjct: 470 RVRRLMVERVPIKVAGWSLIEVEDRVHRFVAGDRDHDHSSDIYKMLEIIG--LMVSEAGC 527
Query: 437 IEK 439
K
Sbjct: 528 SPK 530
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 45/249 (18%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
+L FN + ++ V+++NS++ +H ++ S M N+ T +L AC
Sbjct: 59 SLSIFNSISSQTVLAFNSIIRIHAKSNSSPSNSLSLYSSMRRRFLNANQHTFTFLLHACT 118
Query: 164 HLGK----LSVGMWVHSFIKSNNIKVDVLLSTCLLTMY---------------------- 197
GK + G+ VH + +V + L+ Y
Sbjct: 119 K-GKDCFNIVSGVQVHDHVVKLGYTGNVFVRNALIHFYFEGFDVSEYAKRVFEEEVDEVC 177
Query: 198 -------------VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
V+ G + A +FDEMP R+VVSW+SMIMGY +G E LE F M
Sbjct: 178 SDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLM 237
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE-HYGC-IVDLLARA 302
+KG +PN++ V +LSA G++ GW F + + ++ ++ G +VD+ A+
Sbjct: 238 REKGIRPNESILVTMLSASAQLGLL--GWGRF-VHSTIESLRFRISVAIGTGLVDMYAKC 294
Query: 303 GLVKNSEEL 311
G ++ S +L
Sbjct: 295 GCIEESRDL 303
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 117/259 (45%), Gaps = 26/259 (10%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNCMIAGY 64
G V DA +FD D+VS++SMI G+V+NG+ + F M + + N + ++
Sbjct: 194 GEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESILVTML 253
Query: 65 VAVGDL------EAANELFERMPDRDVVSWNC-MIDGCVRVGNVPLALEFFNRMPARNVV 117
A L + E + R V+ ++D + G + + + F+ M R++
Sbjct: 254 SASAQLGLLGWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGCIEESRDLFDGMMERDIW 313
Query: 118 SWNSM---LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV 174
+W M LA H RAK E L +F E + G P V VL AC+ G +S G +
Sbjct: 314 TWTVMICGLASHDRAK---EALVLFREFIREGFR-PVNVIFVGVLNACSRAGLVSEGRYY 369
Query: 175 HSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHG 232
+ I ++ C++ ++ + G +D A + + M V + V W +++ +HG
Sbjct: 370 FKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVRLIETMTVEPDPVMWATLLDACEIHG 429
Query: 233 NGEKALELFLEM-EKKGPK 250
F+EM EK G K
Sbjct: 430 --------FVEMGEKIGNK 440
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 227/423 (53%), Gaps = 44/423 (10%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
+F L D + NSM+ + + GE G ARK+FDE+ +D+ +WN +++GY +G A
Sbjct: 143 VFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREA 202
Query: 74 NELFERMPDR-----DVVSWNCMIDGCVRVGNVPL------------------------- 103
E+F R+ + D +S ++ C +G++ L
Sbjct: 203 VEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALIS 262
Query: 104 ----------ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
+ F+ MP+R+ ++WN+ ++ + + E + +F M E+G PN+
Sbjct: 263 MYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENG-VDPNKV 321
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
TL +VL+ACA +G L +G + + ++ D+ ++T L+ MY KCG+++ A+ VF++M
Sbjct: 322 TLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDM 381
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG--PKPNDATFVCVLSACTHAGMVME 271
P +N SWN+MI HG ++AL LF M +G +PND TFV +LSAC HAG+V E
Sbjct: 382 PRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDE 441
Query: 272 GWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXX 331
G+ FD+M ++ + PK+EHY C+VDLL+RAG + + ++I+ + K
Sbjct: 442 GYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEK-PDNVTLGALHSA 500
Query: 332 CTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEA 391
C + ++GE V + L+EL+P + G YI+ S Y WDD R+R ++RE G+ K
Sbjct: 501 CQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTP 560
Query: 392 ASS 394
S
Sbjct: 561 GCS 563
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 140/262 (53%), Gaps = 20/262 (7%)
Query: 64 YVAVGDLE-------AANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
++A +LE A E+F+ D D + N M+ R G +A + F+ + +++
Sbjct: 124 FLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDL 183
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
VSWNS+L+ + + E +++F + E P+E +LVSVL AC LG L +G WV
Sbjct: 184 VSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEG 243
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
F+ +KV+ + + L++MY KCG + +R +FD MP R+ ++WN+ I Y +G ++
Sbjct: 244 FVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADE 303
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV--YNIEPKVEH--- 291
A+ LF M++ G PN T VLSAC G + DL +++ Y ++H
Sbjct: 304 AISLFHSMKENGVDPNKVTLTAVLSACASIGAL-------DLGKQMDEYATHRGLQHDIF 356
Query: 292 -YGCIVDLLARAGLVKNSEELI 312
++D+ A+ G +++++ +
Sbjct: 357 VATALIDMYAKCGSLESAQRVF 378
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 105/239 (43%), Gaps = 35/239 (14%)
Query: 39 TGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-PDRDVVSWNCMIDGCVR 97
T +++ + + + N +++ +++ D + +F + P + ++N M+
Sbjct: 34 TKTLQQIHTQFTIHSIHKPNHLLSQSISLKDFTYSTLIFSHITPHPNDYAFNIMLRATTT 93
Query: 98 V-GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
+ PL L +++M N+ PN T
Sbjct: 94 TWHDYPLTLHLYHQMKTLNIS--------------------------------PNNFTFP 121
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
V ACA+L ++ + H + + D ++TMY +CG +AR VFDE+ +
Sbjct: 122 FVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEK 181
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
++VSWNS++ GY G +A+E+F + E+ G +P++ + V VL AC G + G W
Sbjct: 182 DLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRW 240
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/393 (34%), Positives = 223/393 (56%), Gaps = 7/393 (1%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
D + N +I Y + G++ A+++FE M +++VSWN M+DG + G + +A + F M
Sbjct: 148 DRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQ 207
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+V SW+S + +V+A + E + +F++M G NE T+VSVL+ACAHLG L G
Sbjct: 208 ERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKA-NEVTMVSVLSACAHLGALQKGR 266
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP--VRNVVSWNSMIMGYGL 230
+H +I N + + ++L T L+ MY KCGA++ A VF + +V WN+MI G
Sbjct: 267 MMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLAT 326
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD-LMRRVYNIEPKV 289
HG E++L+LF EM+ G + ++ T++C+L+AC H G+V E W +F+ L++R + P
Sbjct: 327 HGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESLVKR--GMTPTS 384
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHY C+VD+LARAG + + + I + ++ C H + +L E V ++LI
Sbjct: 385 EHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSG-CINHRNFDLAETVGRKLI 443
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKN 409
EL+P + G YI LSN YA RWDD + +R + +G++K S V + + ++ +
Sbjct: 444 ELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFVEISEIHHRFIAHD 503
Query: 410 YSVHRKRIMYSMLSELGAHIKLSPAGSIEKDNF 442
+ YSML + +K ++DN
Sbjct: 504 KTHPDSDETYSMLHFVVCQMKHGCPQDNQEDNL 536
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 13/211 (6%)
Query: 68 GDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM----PARNVVSWNSML 123
GD++ + +F ++ + SWN +I G N +L F +M A + +++ ++
Sbjct: 62 GDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLV 121
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPN--EATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
R + + +++++G + +L+ + +C ++ MW H +S
Sbjct: 122 KASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNI------MWAHKVFESM 175
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
K +++ +L Y KCG M +A+ VF+ M R+V SW+S I GY G +A+ +F
Sbjct: 176 QGK-NLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVF 234
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+M GPK N+ T V VLSAC H G + +G
Sbjct: 235 EKMRAVGPKANEVTMVSVLSACAHLGALQKG 265
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 216/398 (54%), Gaps = 6/398 (1%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP--VRDVWNWNCMIAG 63
G A L F+ VS++ MI G +NG+T ARK FD++P ++DV W M+ G
Sbjct: 131 GDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTMMVDG 190
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
Y G++E A E+FE MP+R+ W+ M+ G + G+V A F R+P RN+ WNSM+
Sbjct: 191 YAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMI 250
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI 183
A +V+ + L+ F EM G P+E T+VSVL+ACA LG L G +H I+ I
Sbjct: 251 AGYVQNGCGEKALEAFGEMGVDGFE-PDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGI 309
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
V+ + + L+ MY KCG + AR VF+ RNV WN+MI G+ ++G + LE
Sbjct: 310 AVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDR 369
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
ME+ +P+ TF+ VLSAC H G+V E M Y IE + HYGC+VDLL RAG
Sbjct: 370 MEESNIRPDAVTFITVLSACAHGGLVSEALEVISKMEE-YGIEMGIRHYGCMVDLLGRAG 428
Query: 304 LVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY-IML 362
+K + ELIK + +K C H D ++ E V K + + + ++L
Sbjct: 429 RLKEAYELIKRMPMK-PNETVLGAMIGACWIHSDMKMAEQVMKMIGVDSAACVNSHNVLL 487
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
SN YAA +W+ E +R + + G +K S + L +
Sbjct: 488 SNIYAASEKWEKSEMIRSSMVDGGSEKIPGCSSIILSN 525
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 41/272 (15%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ G + DAR +F+ + ++SM+ G+ K G+ A +F +PVR++ WN MI
Sbjct: 191 YAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMI 250
Query: 62 AGYVAVGDLEAANELFERM------PDR-DVVS--------------------------- 87
AGYV G E A E F M PD VVS
Sbjct: 251 AGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIA 310
Query: 88 -----WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
+ +ID + G++ A F RNV WN+M+A E L+ D M
Sbjct: 311 VNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRM 370
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
ES P+ T ++VL+ACAH G +S + V S ++ I++ + C++ + + G
Sbjct: 371 EES-NIRPDAVTFITVLSACAHGGLVSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGR 429
Query: 203 MDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN 233
+ A ++ MP++ N +MI +H +
Sbjct: 430 LKEAYELIKRMPMKPNETVLGAMIGACWIHSD 461
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 95/218 (43%), Gaps = 40/218 (18%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D DV ++ + G V A + F+ M RN V+WN+M+ ++R L F+E
Sbjct: 83 DVDVFIGTAIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSALLAFEE 142
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKC 200
M P + T VS + + F ++ DV++ T ++ Y K
Sbjct: 143 M-------PGK-TRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTMMVDGYAKK 194
Query: 201 GAMDLARDVFDEM-------------------------------PVRNVVSWNSMIMGYG 229
G M+ AR+VF+ M PVRN+ WNSMI GY
Sbjct: 195 GEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYV 254
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
+G GEKALE F EM G +P++ T V VLSAC G
Sbjct: 255 QNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLG 292
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 235/456 (51%), Gaps = 40/456 (8%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
L +S +D +++D + K G+ A ++F++MP + V WN MI GY GD +
Sbjct: 233 LVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISC 292
Query: 74 NELFERMPDR---------------------------------------DVVSWNCMIDG 94
+LF+RM D+ + ++D
Sbjct: 293 IQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDL 352
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
+ G V A F MP VSWN M++ +V ++ L++F EM +S P+ T
Sbjct: 353 YFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSF-VEPDAIT 411
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
SVL AC+ L L G +H+ I N+ + ++ LL MY KCGA++ A VF +P
Sbjct: 412 FTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLP 471
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
R++VSW SMI YG HG +ALELF EM + KP+ TF+ +LSAC+HAG+V +G +
Sbjct: 472 ERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLY 531
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTT 334
+F+ M VY I P++EHY C++ LL RAG + + E+++ C
Sbjct: 532 HFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRL 591
Query: 335 HMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
H + +LG +A+ LI+ +P D YI+LSN YA+ G+WD+V VR +++ GL+K S
Sbjct: 592 HKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCS 651
Query: 395 VVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
+ + + +FV++ S + + ++LS L +H++
Sbjct: 652 WIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHME 687
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
L L +D+V +S++ + K E A KLFDEMP +DV WN +I+ Y G E A
Sbjct: 132 LVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEA 191
Query: 74 NELFERMP----DRDVVSWNCMIDGCVRV------------------------------- 98
F M + D V+ I C R+
Sbjct: 192 LRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDM 251
Query: 99 ----GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
G + +A+E F +MP + VV+WNSM+ + C+++F M G P T
Sbjct: 252 YGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEG-VKPTLTT 310
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
L S L AC+ +L G +VH +I N I+ D+ L++ L+ +Y KCG ++ A +F MP
Sbjct: 311 LTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMP 370
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
VSWN MI GY G AL LF EM K +P+ TF VL+AC+ + +G
Sbjct: 371 KTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGRE 430
Query: 275 YFDLM--RRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
+L+ R + N E + G ++D+ A+ G V+ + + K
Sbjct: 431 IHNLIVERNLGNNEVVM---GALLDMYAKCGAVEEAFGVFK 468
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%)
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N ++A + R + E L +FD++M P+ T SVL AC L ++ +G +H+ +
Sbjct: 74 NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLV 133
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+ VD+++ + L+ MY KC + A +FDEMP ++V WN++I Y G E+AL
Sbjct: 134 KEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALR 193
Query: 240 LFLEMEKKGPKPNDATFVCVLSACT 264
F M + G +P+ T +S+C
Sbjct: 194 YFGMMRRFGFEPDSVTITTAISSCA 218
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 14/272 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y G+V A +F VS+N MI G+V G+ A +LF EM D
Sbjct: 352 LYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAIT 411
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDV----VSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ ++A + LE E+ + +R++ V ++D + G V A F +P
Sbjct: 412 FTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLP 471
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R++VSW SM+ + +E L++F EM++S P+ T +++L+AC+H G + G+
Sbjct: 472 ERDLVSWTSMITAYGSHGRVYEALELFAEMLQS-NVKPDRVTFLAILSACSHAGLVDDGL 530
Query: 173 W-VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP--VRNVVSWNSMIMGYG 229
+ + I I + +CL+T+ + G + A ++ P + +++
Sbjct: 531 YHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACR 590
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
LH N + +E+ + K P+D++ +LS
Sbjct: 591 LHKNLDLGVEIAENLIDK--DPDDSSTYIILS 620
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 235/456 (51%), Gaps = 40/456 (8%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
L +S +D +++D + K G+ A ++F++MP + V WN MI GY GD +
Sbjct: 233 LVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISC 292
Query: 74 NELFERMPDR---------------------------------------DVVSWNCMIDG 94
+LF+RM D+ + ++D
Sbjct: 293 IQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDL 352
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
+ G V A F MP VSWN M++ +V ++ L++F EM +S P+ T
Sbjct: 353 YFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSF-VEPDAIT 411
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
SVL AC+ L L G +H+ I N+ + ++ LL MY KCGA++ A VF +P
Sbjct: 412 FTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLP 471
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
R++VSW SMI YG HG +ALELF EM + KP+ TF+ +LSAC+HAG+V +G +
Sbjct: 472 ERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLY 531
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTT 334
+F+ M VY I P++EHY C++ LL RAG + + E+++ C
Sbjct: 532 HFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRL 591
Query: 335 HMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
H + +LG +A+ LI+ +P D YI+LSN YA+ G+WD+V VR +++ GL+K S
Sbjct: 592 HKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCS 651
Query: 395 VVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
+ + + +FV++ S + + ++LS L +H++
Sbjct: 652 WIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHME 687
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
L L +D+V +S++ + K E A KLFDEMP +DV WN +I+ Y G E A
Sbjct: 132 LVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEA 191
Query: 74 NELFERMP----DRDVVSWNCMIDGCVRV------------------------------- 98
F M + D V+ I C R+
Sbjct: 192 LRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDM 251
Query: 99 ----GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
G + +A+E F +MP + VV+WNSM+ + C+++F M G P T
Sbjct: 252 YGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEG-VKPTLTT 310
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
L S L AC+ +L G +VH +I N I+ D+ L++ L+ +Y KCG ++ A +F MP
Sbjct: 311 LTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMP 370
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
VSWN MI GY G AL LF EM K +P+ TF VL+AC+ + +G
Sbjct: 371 KTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGRE 430
Query: 275 YFDLM--RRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
+L+ R + N E + G ++D+ A+ G V+ + + K
Sbjct: 431 IHNLIVERNLGNNEVVM---GALLDMYAKCGAVEEAFGVFK 468
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%)
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N ++A + R + E L +FD++M P+ T SVL AC L ++ +G +H+ +
Sbjct: 74 NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLV 133
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+ VD+++ + L+ MY KC + A +FDEMP ++V WN++I Y G E+AL
Sbjct: 134 KEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALR 193
Query: 240 LFLEMEKKGPKPNDATFVCVLSACT 264
F M + G +P+ T +S+C
Sbjct: 194 YFGMMRRFGFEPDSVTITTAISSCA 218
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 14/272 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y G+V A +F VS+N MI G+V G+ A +LF EM D
Sbjct: 352 LYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAIT 411
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDV----VSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ ++A + LE E+ + +R++ V ++D + G V A F +P
Sbjct: 412 FTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLP 471
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R++VSW SM+ + +E L++F EM++S P+ T +++L+AC+H G + G+
Sbjct: 472 ERDLVSWTSMITAYGSHGRVYEALELFAEMLQS-NVKPDRVTFLAILSACSHAGLVDDGL 530
Query: 173 W-VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP--VRNVVSWNSMIMGYG 229
+ + I I + +CL+T+ + G + A ++ P + +++
Sbjct: 531 YHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACR 590
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
LH N + +E+ + K P+D++ +LS
Sbjct: 591 LHKNLDLGVEIAENLIDK--DPDDSSTYIILS 620
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 215/384 (55%), Gaps = 3/384 (0%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L F L++ +S+I + E A + F+++ ++DV +WN +++ Y+ +G
Sbjct: 131 LAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVD 190
Query: 73 ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSF 132
A F++MP R+++SW +++G V+ V A F+ M RNVVSW +M++ +V+ K F
Sbjct: 191 AQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRF 250
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
+ LK+F M ++ E PN T SVL ACA L +G+ +H I + I DV+ T
Sbjct: 251 VDALKLFVLMFKT-ETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTS 309
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
L+ MY KCG MD A VF+ + +N+VSWN++I GY HG +ALE F M+ G P+
Sbjct: 310 LVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGT-PD 368
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
+ TFV VLSAC HAG+V EG +F M Y I+ ++EHY C+VDL RAG +E LI
Sbjct: 369 EVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLI 428
Query: 313 KYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRW 372
K + + C H + ELGE A+R+ LE Y +LS +G W
Sbjct: 429 KNMPFE-PDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVW 487
Query: 373 DDVERVRVMIREKGLQKEAASSVV 396
V +R ++E+G++K+ A S V
Sbjct: 488 SSVNELRDTMKERGIKKQTAISWV 511
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y G+ DA+ FD +++S+ ++++G+VKN + AR +FD+M R+V +W MI
Sbjct: 182 YMELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMI 241
Query: 62 AGYVAVGDLEAANELF------ERMPDR-------------------------------- 83
+GYV A +LF E P+
Sbjct: 242 SGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIA 301
Query: 84 -DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
DV+ ++D + G++ A F + +N+VSWN+++ + L+ FD M
Sbjct: 302 NDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRM 361
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVG-MWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
G P+E T V+VL+AC H G + G + I+ ++ +C++ +Y + G
Sbjct: 362 KVVG--TPDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAG 419
Query: 202 AMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGP 249
D A ++ MP +VV W +++ GLH N GE A E +E P
Sbjct: 420 RFDEAENLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHP 471
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 31/286 (10%)
Query: 18 SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-DVWNWNCMIAGYVAVGDLEAANEL 76
++T+ N MI+ ++ N A KL DE + ++ +WN ++ Y+ + ++L
Sbjct: 3 TVTITTPQLNYMINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDL 62
Query: 77 FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA------------ 124
F++MP +D VSWN M+ G R N F +M VV + ++
Sbjct: 63 FDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELD 122
Query: 125 -----LHVRAKSFWECLKMF--DEMMESGEAVPNEATL------VSVLTACAHLGKLSVG 171
+H A L +F ++ + + E L +S+ + +S
Sbjct: 123 VLVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSY 182
Query: 172 MWVHSFIKSNNI-----KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
M + F+ + + +++ T L+ YVK ++ AR VFD+M RNVVSW +MI
Sbjct: 183 MELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMIS 242
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
GY + AL+LF+ M K +PN TF VL AC + ++ G
Sbjct: 243 GYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMG 288
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 174 VHSFIKSNNIK-----VDVLLSTC-------LLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
++++I +NN+K +D L +C ++T Y++ + D+FD+MP+++ VSW
Sbjct: 15 INTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSW 74
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
N M+ G+ N E FL+M + G PND T +L A + + L+R+
Sbjct: 75 NIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDV-------LVRQ 127
Query: 282 VYNIEPKVEHY 292
V+ + + HY
Sbjct: 128 VHALAFHLGHY 138
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 144/459 (31%), Positives = 241/459 (52%), Gaps = 43/459 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV--------- 51
MY+ GR+ R LFD D VS+N MI G VK A ++F M V
Sbjct: 147 MYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNEKISEA 206
Query: 52 ------------------RDVWNW-------------NCMIAGYVAVGDLEAANELFERM 80
+++ + N ++ Y G + A E+F+ M
Sbjct: 207 TVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIFDGM 266
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
+++V W M+ G V G + A + F++ P R+VV W +M+ +V+ F E + +F+
Sbjct: 267 IEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFE 326
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
EM G P++ +V++LT CA LG L G W+H +++ N I VD ++ T L+ MY KC
Sbjct: 327 EMQVRG-VKPDKFIVVALLTCCAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLIEMYAKC 385
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G ++ + +VF+ + ++ SW S+I G ++G +ALELF EM+ G KP+D TF+ +L
Sbjct: 386 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLL 445
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXX 320
+AC+H G+V EG F M +Y IEP +EHYGC +DLL RAGL+ +EELIK + +
Sbjct: 446 NACSHGGLVEEGHKLFHSMSCIYGIEPNLEHYGCFIDLLGRAGLLHEAEELIKKLPDQKN 505
Query: 321 XXXXXX--XXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERV 378
C T+ ++++GE +A L +++ D + +L++ YA+ RW+D +
Sbjct: 506 ETIVAIYGSFLSACRTYGNTDMGERIATALEKVKSSDSSLHSLLASIYASADRWEDASKT 565
Query: 379 RVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRI 417
R +++ ++K S + ++ ++ V ++S R +I
Sbjct: 566 RSKMKDLHIRKVPGCSAIEVDGSGNQGGVGDFSSFRSKI 604
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 148/338 (43%), Gaps = 40/338 (11%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGD 69
+F+ +L L YN +I K LF+++ + D + + ++ + D
Sbjct: 59 IFNHTLHPSLFLYNLLIKSFFKRNSFQTLISLFNQLRLNGLYPDNYTYPFVLKAVAFIAD 118
Query: 70 LEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL 125
++ F+ D D N +D +G + + F+ + R+ VSWN M++
Sbjct: 119 FRQGTKIHAFVFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISG 178
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
V+ + F E +++F M +EAT+VS LTACA + VG +H FI +
Sbjct: 179 CVKCRRFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDF 238
Query: 186 DVLLSTCLLTMYVK-------------------------------CGAMDLARDVFDEMP 214
+ + LL MY K CG +D ARD+FD+ P
Sbjct: 239 TMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSP 298
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
R+VV W +MI GY ++A+ LF EM+ +G KP+ V +L+ C G + G W
Sbjct: 299 TRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRW 358
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
D +R + V ++++ A+ G V+ S E+
Sbjct: 359 IHDYVRENRIVVDAVVGTS-LIEMYAKCGCVEKSLEVF 395
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 146/440 (33%), Positives = 239/440 (54%), Gaps = 21/440 (4%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G + +A +FD S D+V++ ++I+G VKNG G A + F EM ++ V +I G+
Sbjct: 155 GFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGV-----VIDGFT 209
Query: 66 AVGDLEAANELFE-----RMPDRDVVSWNCMIDGCV---------RVGNVPLALEFFNRM 111
L AA + + R+ V + ++DG V + G A + F+ M
Sbjct: 210 VASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEM 269
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
P R+VV+W ++A V+ K + + L F M+ VPNE TL SVL+ACAH+G L G
Sbjct: 270 PYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLD-NVVPNEFTLTSVLSACAHVGALDQG 328
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
VH +++ N+ ++ +L T L+ MY KCG +D A VF+ + V+NV +W +MI G +H
Sbjct: 329 RLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVH 388
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G+ AL +F M + G +PND TF+ VL AC+H G V EG F++MR Y+++P +EH
Sbjct: 389 GDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEH 448
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
YGC+VDLL RAG +++++++I + +K C +H D +GE + L+ L
Sbjct: 449 YGCMVDLLGRAGCLEDAKQIIDNMPMK-PSPGVLGALLGACVSHKDFVMGEHIGNILVNL 507
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
+ Y +L+N Y+ W+ V RVR +++ ++K S + + ++ ++S
Sbjct: 508 QQNHNTGYALLANLYSTCQNWEAVARVRKLMKGTQVEKTPGYSWIEVAGSMHEFKAFDHS 567
Query: 412 VHRKRIMYSMLSELGAHIKL 431
+Y ML L +K+
Sbjct: 568 HSEFSCVYLMLENLILQMKM 587
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 21/254 (8%)
Query: 75 ELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE 134
++F+ D D N I G + A + F+ P R++V+W +++ V+ E
Sbjct: 131 QVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGE 190
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCL 193
L+ F EM G V + T+ SVL A A +G G VH F +++ + +D + L
Sbjct: 191 ALRCFVEMRLKG-VVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCAL 249
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
+ MY KCG + A VFDEMP R+VV+W ++ G+ + AL F M PN+
Sbjct: 250 VDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNE 309
Query: 254 ATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC---------IVDLLARAGL 304
T VLSAC H G + +G R V+ +EH C +VD+ A+ G
Sbjct: 310 FTLTSVLSACAHVGALDQG-------RLVHRY---MEHNDCNLNAVLGTSLVDMYAKCGC 359
Query: 305 VKNSEELIKYVSVK 318
V + + + + VK
Sbjct: 360 VDKALMVFENLQVK 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
MY G DA +FD D+V++ ++ G V+ + A F M + +V +
Sbjct: 252 MYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFT 311
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+++ VG L+ + M D V ++D + G V AL F +
Sbjct: 312 LTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQ 371
Query: 113 ARNVVSWNSM---LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+NV +W +M LA+H A L +F M+ESG PN+ T + VL AC+H G +
Sbjct: 372 VKNVHTWTAMINGLAVHGDALG---ALNIFSRMLESGLR-PNDVTFLGVLGACSHGGFVD 427
Query: 170 VGMWVHSFIK-SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
G + ++ + ++K ++ C++ + + G ++ A+ + D MP++
Sbjct: 428 EGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMK 475
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 146/440 (33%), Positives = 239/440 (54%), Gaps = 21/440 (4%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G + +A +FD S D+V++ ++I+G VKNG G A + F EM ++ V +I G+
Sbjct: 155 GFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGV-----VIDGFT 209
Query: 66 AVGDLEAANELFE-----RMPDRDVVSWNCMIDGCV---------RVGNVPLALEFFNRM 111
L AA + + R+ V + ++DG V + G A + F+ M
Sbjct: 210 VASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEM 269
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
P R+VV+W ++A V+ K + + L F M+ VPNE TL SVL+ACAH+G L G
Sbjct: 270 PYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLD-NVVPNEFTLTSVLSACAHVGALDQG 328
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
VH +++ N+ ++ +L T L+ MY KCG +D A VF+ + V+NV +W +MI G +H
Sbjct: 329 RLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVH 388
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G+ AL +F M + G +PND TF+ VL AC+H G V EG F++MR Y+++P +EH
Sbjct: 389 GDALGALNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEH 448
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
YGC+VDLL RAG +++++++I + +K C +H D +GE + L+ L
Sbjct: 449 YGCMVDLLGRAGCLEDAKQIIDNMPMK-PSPGVLGALLGACVSHKDFVMGEHIGNILVNL 507
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
+ Y +L+N Y+ W+ V RVR +++ ++K S + + ++ ++S
Sbjct: 508 QQNHNTGYALLANLYSTCQNWEAVARVRKLMKGTQVEKTPGYSWIEVAGSMHEFKAFDHS 567
Query: 412 VHRKRIMYSMLSELGAHIKL 431
+Y ML L +K+
Sbjct: 568 HSEFSCVYLMLENLILQMKM 587
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 21/254 (8%)
Query: 75 ELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE 134
++F+ D D N I G + A + F+ P R++V+W +++ V+ E
Sbjct: 131 QVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGE 190
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCL 193
L+ F EM G V + T+ SVL A A +G G VH F +++ + +D + L
Sbjct: 191 ALRCFVEMRLKG-VVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCAL 249
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
+ MY KCG + A VFDEMP R+VV+W ++ G+ + AL F M PN+
Sbjct: 250 VDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNE 309
Query: 254 ATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC---------IVDLLARAGL 304
T VLSAC H G + +G R V+ +EH C +VD+ A+ G
Sbjct: 310 FTLTSVLSACAHVGALDQG-------RLVHRY---MEHNDCNLNAVLGTSLVDMYAKCGC 359
Query: 305 VKNSEELIKYVSVK 318
V + + + + VK
Sbjct: 360 VDKALMVFENLQVK 373
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
MY G DA +FD D+V++ ++ G V+ + A F M + +V +
Sbjct: 252 MYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFT 311
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRD----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+++ VG L+ + M D V ++D + G V AL F +
Sbjct: 312 LTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQ 371
Query: 113 ARNVVSWNSM---LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+NV +W +M LA+H A L +F M+ESG PN+ T + VL AC+H G +
Sbjct: 372 VKNVHTWTAMINGLAVHGDALG---ALNIFSRMLESGLR-PNDVTFLGVLGACSHGGFVD 427
Query: 170 VGMWVHSFIK-SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
G + ++ + ++K ++ C++ + + G ++ A+ + D MP++
Sbjct: 428 EGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMK 475
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 229/447 (51%), Gaps = 55/447 (12%)
Query: 2 YSVFGRVSDARLLF----DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRD 53
YS G V A+ +F + +LVS+N MI G G A +LF EM + D
Sbjct: 39 YSRLGNVDRAKEVFCEMRKEGVEPNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPD 98
Query: 54 VWNWNCMIAGYVAVGDLEAA--------------------------------------NE 75
+C++ G VG+LE +
Sbjct: 99 GSTVSCVLPG---VGNLEDVLMGKQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSR 155
Query: 76 LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRAKS 131
+F+ + ++ S N + G R G V AL+ F + A NVV+W S++A V+
Sbjct: 156 VFDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTSIIASCVQNGK 215
Query: 132 FWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLST 191
E L++F +M G PN T+ S++ AC ++ L+ G +H F I DV + +
Sbjct: 216 DMEALELFRDMQADG-VEPNAVTIPSLIPACGNISALTHGKEIHCFSLRKGIFDDVYVGS 274
Query: 192 CLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKP 251
L+ MY CG + L+++ FDEMP RN+VSWNS++ GY +HG ++ +E+F M + G KP
Sbjct: 275 ALIDMYANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKP 334
Query: 252 NDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+ TF VLSACT G+ EGW YF+ M + Y+++PK+EHY C+V LL+R G ++ + +
Sbjct: 335 DSITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAYSI 394
Query: 312 IKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGR 371
IK + + C H + LGEI A++L LEP + G YI+LSN YA++G
Sbjct: 395 IKEMPFE-PDACVWGALLSSCRVHHNLSLGEIAAEKLFVLEPDNPGNYILLSNIYASKGM 453
Query: 372 WDDVERVRVMIREKGLQKEAASSVVHL 398
WD+ RVR M++ KGLQK S + +
Sbjct: 454 WDEENRVRDMMKSKGLQKNPGCSWIEI 480
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 6/228 (2%)
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSW 119
Y+ ++ A +LF+ M DRDV+ W+ MI G R+GNV A E F M N+VSW
Sbjct: 8 YLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPNLVSW 67
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N M+A + E +++F EM+ G +P+ +T+ VL +L + +G VH ++
Sbjct: 68 NGMIAGFGNVGLYDEAVRLFHEMVSEG-FLPDGSTVSCVLPGVGNLEDVLMGKQVHGYVI 126
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
++ D + + LL MY +CG VFDE+ + S N+ + G +G + AL+
Sbjct: 127 KLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTALD 186
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
+F + + + N T+ ++++C G ME F M + +EP
Sbjct: 187 VFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDM-QADGVEP 233
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 53/87 (60%)
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
L+ MY+KC +D A+ +FD M R+V+ W++MI GY GN ++A E+F EM K+G +PN
Sbjct: 4 LVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPN 63
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLM 279
++ +++ + G+ E F M
Sbjct: 64 LVSWNGMIAGFGNVGLYDEAVRLFHEM 90
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 223/426 (52%), Gaps = 39/426 (9%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDL 70
AR++ DLV N+++D + K AR +FD MP+RDV + M++GY +
Sbjct: 276 ARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSV 335
Query: 71 EAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAK 130
+AA +F M +R+VVSWN +I G + G A+ F L ++ +
Sbjct: 336 KAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLF----------------LLLKRE 379
Query: 131 SFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI------K 184
S W P T ++L ACA+L L +G H+ I +
Sbjct: 380 SIW----------------PTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGED 423
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
D+ + L+ MY+KCG ++ R VF+ M R+ VSWN+MI+GY +G G +ALE+F EM
Sbjct: 424 SDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREM 483
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
G +P+ T + VLSAC+HAG+V EG YF M + + P +HY C+VDLL RAG
Sbjct: 484 LVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGC 543
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSN 364
+ + LI+ + ++ C H + LG+ VA+RL+E++P++ GPY++LSN
Sbjct: 544 LDEANNLIQTMPME-PDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSN 602
Query: 365 TYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSE 424
YA GRW DV RVR +R+ G+ K+ S + ++ + VK+ K+ +Y +L
Sbjct: 603 MYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKI 662
Query: 425 LGAHIK 430
L +K
Sbjct: 663 LTEQMK 668
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 135/256 (52%), Gaps = 5/256 (1%)
Query: 21 LDLVSYNSMIDGHVKNGETGAAR----KLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
LD + ++D VK+ AR ++ +++ N ++ Y G LE A ++
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76
Query: 77 FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECL 136
F+ M R+ SWN ++ + G + AL F MP R+ SWN+M++ + F E L
Sbjct: 77 FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEAL 136
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTM 196
+ +M S + V NE + S L+ACA L LS+G+ +H I + +DV + + L+ M
Sbjct: 137 RFVVDM-HSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDM 195
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
Y KC + A+ FD+M VRN+VSWNS+I Y +G KALE+F+ M G +P++ T
Sbjct: 196 YSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITL 255
Query: 257 VCVLSACTHAGMVMEG 272
V SAC + EG
Sbjct: 256 ASVASACASLSAIREG 271
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 154/357 (43%), Gaps = 83/357 (23%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y G + DAR +FD + S+N+++ K G A LF MP RD +WN M
Sbjct: 63 VYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAM 122
Query: 61 IAGYVAVGDLEAANELFERMPDRDVV----SWNCMIDGCVRVGNVPLALEF--------- 107
++G+ E A M D V S+ + C + ++ + ++
Sbjct: 123 VSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRY 182
Query: 108 --------------------------FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
F+ M RN+VSWNS++ + + + L++F
Sbjct: 183 SLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVR 242
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKC 200
MM G P+E TL SV +ACA L + G+ +H+ +K + + D++L L+ MY KC
Sbjct: 243 MMNCG-IEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKC 301
Query: 201 GAMDLARDVFDEMPV-------------------------------RNVVSWNSMIMGYG 229
++ AR VFD MP+ RNVVSWN++I GY
Sbjct: 302 RRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYT 361
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC-----------THAGMVMEGWWY 275
+G E+A+ LFL ++++ P TF +L+AC H ++ G+W+
Sbjct: 362 QNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWF 418
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 138/304 (45%), Gaps = 57/304 (18%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ RV++ARL+FD D+VS SM+ G+ K AAR +F M R+V +WN +
Sbjct: 297 MYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNAL 356
Query: 61 IAGYVAVGDLEAANEL-------------------------------------------- 76
IAGY G+ E A L
Sbjct: 357 IAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGF 416
Query: 77 -FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWEC 135
F+ D D+ N +ID ++ G V F RM R+ VSWN+M+ + + E
Sbjct: 417 WFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEA 476
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVL----LST 191
L++F EM+ SGE P+ T++ VL+AC+H G + G + +S I+ ++ T
Sbjct: 477 LEIFREMLVSGER-PDHVTMIGVLSACSHAGLVEEG---RCYFQSMTIEHGLVPVKDHYT 532
Query: 192 CLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKK 247
C++ + + G +D A ++ MP+ + V W S++ +HGN G+ E LE++
Sbjct: 533 CMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPL 592
Query: 248 GPKP 251
P
Sbjct: 593 NSGP 596
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/451 (32%), Positives = 235/451 (52%), Gaps = 43/451 (9%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM- 80
D +++S+I+ + K ARK+FDE PV ++N MI+GY + A +LF RM
Sbjct: 93 DPYTHSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRML 152
Query: 81 ---------------------PDR------------------DVVSWNCMIDGCVRVGNV 101
P++ D+ N + V+ G V
Sbjct: 153 CENRFFVNSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLSVGNSFLTMYVKCGEV 212
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
+ F+ + +++++WN+M++ + + L+++ EM + G P+ TL+ VL +
Sbjct: 213 EYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCS 272
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN--VV 219
CA+LG +G V I + + L L+ MY +CG + AR+VFD M R+ VV
Sbjct: 273 CANLGAQGIGREVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSVV 332
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
SW ++I GYG+HG GE A+ELF M + G KP+ FV VLSAC+HAG+ +G YFD M
Sbjct: 333 SWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTVFVSVLSACSHAGLTEKGLEYFDEM 392
Query: 280 RRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSE 339
R Y ++P EHY C+VDLL R+G +K + +LI + VK C H + E
Sbjct: 393 ERKYGLQPGPEHYSCLVDLLGRSGRLKEAMDLIDLMKVK-PDGPVWGALLGACKIHRNVE 451
Query: 340 LGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
L E+ + +IELEP +IG Y++LSN Y+ + V +VRVM+R++ L+K+ S V +
Sbjct: 452 LAEVAFQHVIELEPTNIGYYVLLSNLYSDTKNLEGVLKVRVMMRDRNLRKDPGCSYVEYK 511
Query: 400 DFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
++ + S + + +Y ML+EL +K
Sbjct: 512 GKMHLFYSGDTSHPQSKEIYRMLNELENLVK 542
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
+WN L + + F E L ++ M+ S PN T +L +CA L G +H
Sbjct: 24 TTAWNCYLRELSKQRKFMEALTVYRHMLRS-SFFPNTFTFPVLLKSCALLSLPFTGSQLH 82
Query: 176 SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
S I + D + L+ MY K LAR VFDE PV +S+N+MI GY +
Sbjct: 83 SHILKTGSQPDPYTHSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIV 142
Query: 236 KALELFLEM 244
+A++LF M
Sbjct: 143 EAIKLFRRM 151
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 209/385 (54%), Gaps = 42/385 (10%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
DL N++I +VK G ARK+FDEMP RDV W +I Y GD+++A ELF +P
Sbjct: 143 DLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLP 202
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+D+V+W M+ G + N MP + L+ F +
Sbjct: 203 VKDMVAWTSMVTGYSQ-----------NAMPKK--------------------ALQFFRK 231
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI--KVDVLLSTCLLTMYVK 199
M E+G V +E TLV ++ACA LG W+ +S+ +V + + L+ MY K
Sbjct: 232 MREAG-VVTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSK 290
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
CG ++ A +VF M NV S++SMI+G+ +HG A++LF EM + G KPN TFV +
Sbjct: 291 CGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGL 350
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKX 319
+AC+HAGMV +G F M+ Y + P +HY C+ DLL RAG ++ + +L++ + ++
Sbjct: 351 FTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEP 410
Query: 320 XXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVR 379
H + ++ EI ++ L ELEP ++G Y++LS TYA +WDDV RVR
Sbjct: 411 NGGVWGALLGAS-HIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVR 469
Query: 380 VMIREKGLQK-------EAASSVVH 397
++REK L+K EA + ++H
Sbjct: 470 KLMREKQLRKNPGCSWVEAKNGIIH 494
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 125/283 (44%), Gaps = 50/283 (17%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY FG + AR +FD D+V++ +I + ++G+ +A +LF +PV+D+ W M
Sbjct: 153 MYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWTSM 212
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVS----------------------W---------- 88
+ GY + A + F +M + VV+ W
Sbjct: 213 VTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESSRF 272
Query: 89 ---------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML---ALHVRAKSFWECL 136
+ +ID + GNV A F M NV S++SM+ A+H RA+S +
Sbjct: 273 GSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARS---AI 329
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS-NNIKVDVLLSTCLLT 195
K+F EM+E+G PN T V + TAC+H G + G + +K + C+
Sbjct: 330 KLFYEMLENG-IKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMAD 388
Query: 196 MYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKA 237
+ + G ++ A + MP+ N W +++ +HGN + A
Sbjct: 389 LLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVA 431
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 149/449 (33%), Positives = 237/449 (52%), Gaps = 12/449 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G ARL+F+ + VS+N+MIDG+ + G++ A F +M V
Sbjct: 263 MYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVA 322
Query: 61 IAGYVA----VGDLEAA----NELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
I + +GDLE + ++ D +V N ++ + V LA F +
Sbjct: 323 IMAALTACADLGDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLK 382
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ V+WN+M+ + + E L +F +M+S E P+ TLV+V+TA A L +
Sbjct: 383 KKTNVTWNAMILGYAQNGCVNEALYLFC-VMQSQEVKPDCFTLVAVITALADLSVNRMAK 441
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
W+H + DV ++T L+ MY KCGA AR +FD M R+V++WN+MI GYG HG
Sbjct: 442 WIHGLAIRTFMDNDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHG 501
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G++A+++F M+K+ PND TF+ V+SAC+H+G V EG +F M+ Y +EP ++HY
Sbjct: 502 LGKEAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHY 561
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
+VDLL RAG + + LI+ + +K C H + ELGE A +L EL+
Sbjct: 562 SAVVDLLGRAGKLHGAWNLIEEMPIK-PGITVLGAMLGACKIHKNVELGEKAADKLFELD 620
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P + G +++L+N Y + WD V +VR + +KG+ K S V L + ++ + +
Sbjct: 621 PDEGGYHVLLANMYVSASMWDKVAKVRTAMEKKGIHKTPGCSFVELRNEVHTFYSGSTNH 680
Query: 413 HRKRIMYSMLSELGAHIKLSPAGSIEKDN 441
+ + +Y+ L LG K+ AG I N
Sbjct: 681 PQAKKIYAFLEALGD--KIRDAGYIPDTN 707
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 13/289 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDV 54
M+ G +++A L+FD+ V Y++M+ G+ KN A + M PV V
Sbjct: 61 MFFKHGSINEASLVFDTVEHKQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDGVRPV--V 118
Query: 55 WNWNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+++ ++ +LE E+ ++ + D+ S ++ V+ G + A + F R
Sbjct: 119 YDFAYLLQLCGKKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFER 178
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+ +++VSW S++A + + L +F M E+G + TLVS+L A A + L +
Sbjct: 179 LSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKA-DSVTLVSILPAVADIKDLRI 237
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G +H + + V + LL MY +CG +AR VF+ M + VSWN+MI GY
Sbjct: 238 GKSIHGYALRLGFESKVSVINALLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQ 297
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
G E+A FL+M +G +P + L+AC G + G + L+
Sbjct: 298 IGKSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFVHKLV 346
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 202/368 (54%), Gaps = 2/368 (0%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N +I Y + A +F++MP RD++SWN ++ G V + A F+ MP RNV+
Sbjct: 330 NALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVL 389
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
+W M++ + E LK+F++M G P + +TAC+ LG L G +HS
Sbjct: 390 TWTVMISGLAQNGFGEEGLKLFNQMKSEGLE-PCDYAFAGAITACSVLGSLDNGQQIHSQ 448
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ + L+TMY +CG ++ A VF MP + VSWN+MI HG+G KA
Sbjct: 449 VIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKA 508
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
+ELF +M K+ P+ TF+ +L+AC HAG++ EG YFD M Y I P +HY ++D
Sbjct: 509 IELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLID 568
Query: 298 LLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIG 357
LL RAG+ ++ +IK + + C H + ELG A RL+EL P G
Sbjct: 569 LLCRAGMFLKAQSVIKSMPFE-AGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDG 627
Query: 358 PYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRI 417
YI+LSN YAA G+WD+V RVR+++RE+G++KE S V +E+ + V + +
Sbjct: 628 TYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQA 687
Query: 418 MYSMLSEL 425
+Y+ L +L
Sbjct: 688 VYTYLQQL 695
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 174/403 (43%), Gaps = 94/403 (23%)
Query: 2 YSVFGRVSDARLLFDSS-LTL-DLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVW 55
YS G V A+ LF+++ LT+ D VSYN+MI + + AA LF +M + D +
Sbjct: 81 YSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPF 140
Query: 56 NWNCMIAGYVAVGDLE-------------------------------------------- 71
++ +++ + D E
Sbjct: 141 TFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLM 200
Query: 72 -AANELFERMPDRDVV--SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVR 128
+A ++F+ P + SW MI G VR ++ A E + + V+WN+M++ +VR
Sbjct: 201 ASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVR 260
Query: 129 AKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA----HLGKLSVGMWVHSFIKSNNIK 184
+ E F M G +E T S+++AC +G + G VH +I ++
Sbjct: 261 RGLYEEAFDTFRRMHSMG-IQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVE 319
Query: 185 VD----VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY------------ 228
+ ++ L+T Y K M AR VFD+MPVR+++SWN+++ GY
Sbjct: 320 PSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSI 379
Query: 229 -----------------GL--HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
GL +G GE+ L+LF +M+ +G +P D F ++AC+ G +
Sbjct: 380 FSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSL 439
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
G + R+ + + + ++ + +R G+V+++E +
Sbjct: 440 DNGQQIHSQVIRLGH-DSGLSAGNALITMYSRCGVVESAESVF 481
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 17/294 (5%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIA 62
+ R A +L S + N +I+ + K+ ARKLFD++P D+ +++
Sbjct: 21 QIIARAVHAHIL-TSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLS 79
Query: 63 GYVAVGDLEAANELFERMP--DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV--- 117
Y + G+++ A +LF P RD VS+N MI + AL F +M +
Sbjct: 80 AYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDP 139
Query: 118 -SWNSML-ALHVRAKSFWECLKMFDEMMESGEAVPNEAT--LVSVLTACAHLGKLSVGMW 173
+++S+L AL + A C + E+++ G + T L+S CA +
Sbjct: 140 FTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQL 199
Query: 174 VHS----FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
+ S F ++ ++ T ++ YV+ + AR++ D + V+WN+MI GY
Sbjct: 200 MASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYV 259
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
G E+A + F M G + ++ T+ ++SAC G E F+ R+V+
Sbjct: 260 RRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISAC---GSCNEKMGMFNCGRQVH 310
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 24/135 (17%)
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFI---------KSNNI-----------KVDVLLS 190
N + ++ H L+ G ++FI KS+NI K D++
Sbjct: 15 NHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVAR 74
Query: 191 TCLLTMYVKCGAMDLARDVFDEMP--VRNVVSWNSMIMGYGLHGN-GEKALELFLEMEKK 247
T LL+ Y G + LA+ +F+ P +R+ VS+N+MI Y HGN G AL LF++M++
Sbjct: 75 TTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYS-HGNDGHAALNLFVQMKRY 133
Query: 248 GPKPNDATFVCVLSA 262
G P+ TF VLSA
Sbjct: 134 GFLPDPFTFSSVLSA 148
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 133/401 (33%), Positives = 220/401 (54%), Gaps = 26/401 (6%)
Query: 28 SMIDGHVKN-GETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
S++D + K G A K+FDEM R++ + +++GY+ VGD+E +F+ M DRDV
Sbjct: 140 SLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVP 199
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
+WN +I GC + G + F M + A + F + K
Sbjct: 200 AWNAVISGCTQNGFFSEGIRLFREM----------VFAAGLGEGGFCKGNK--------- 240
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
PN+ T+V VL+AC H G L +G W+H ++ + VD +S L+ MY KCG+++LA
Sbjct: 241 ---PNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELA 297
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK--KGPKPNDATFVCVLSACT 264
R VF+ + + SWNSMI Y LHG E A+ F +M + G +P++ TF+ +L+ACT
Sbjct: 298 RKVFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACT 357
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXX 324
H G+V +G YF++M + Y IEP++ HYGC++DLL RAG + +++K +S++
Sbjct: 358 HGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSME-PDEVV 416
Query: 325 XXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIRE 384
C H ++L E AK+L+E++P + G ML+N Y G+WD++ V +++
Sbjct: 417 WGSLLNGCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQ 476
Query: 385 KGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
+ K S + ++D ++F + S + +Y++L L
Sbjct: 477 QKSYKIPGCSWIEVDDKVHQFFSLDQSNPKTEELYNILESL 517
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 198/327 (60%), Gaps = 2/327 (0%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
D + N +I Y + A ++F RD+VS+N MIDG V+ + A E F+ MP
Sbjct: 147 DSFVMNSLIRVYSVNDRVNDAYKVFCESGYRDIVSYNVMIDGFVKNFKLDRARELFDEMP 206
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
RN V+W +M+A + +AK E +++F+EM+ E +P+ LVSVL+ACA LG+L G
Sbjct: 207 QRNEVTWGTMIAGYSQAKLCREAVELFNEMI-GLEFIPDNIALVSVLSACAQLGELEQGR 265
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+VH +I N I+VD L+T L+ +Y KCG +++AR+ F+ ++V +WN+M++G+ +HG
Sbjct: 266 FVHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIARETFESCTNKDVFTWNAMLVGFAIHG 325
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G LE F M +G KP+ TF+ VL C+HAG+V E FD M VY + + +HY
Sbjct: 326 QGLVLLEYFSRMVGEGIKPDGVTFLGVLVGCSHAGLVCEARKVFDEMETVYGVAREGKHY 385
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
GC+ D+LARAGL++ S ELIK + C H + E+ + A++++E++
Sbjct: 386 GCMADMLARAGLIEESRELIKGMP-NGGDVFAWGGLLGGCRIHGNVEIAKQAAQQVMEIK 444
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVR 379
P D G Y +++N YA +WDD+ ++R
Sbjct: 445 PEDGGVYSVMANIYANTEQWDDLVKIR 471
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 135/306 (44%), Gaps = 52/306 (16%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+YSV RV+DA +F S D+VSYN MIDG VKN + AR+LFDEMP R+ W M
Sbjct: 157 VYSVNDRVNDAYKVFCESGYRDIVSYNVMIDGFVKNFKLDRARELFDEMPQRNEVTWGTM 216
Query: 61 IAGYVAVGDLEAANELFERM------PD-----------------------RDVVSWN-- 89
IAGY A ELF M PD D ++ N
Sbjct: 217 IAGYSQAKLCREAVELFNEMIGLEFIPDNIALVSVLSACAQLGELEQGRFVHDYITRNGI 276
Query: 90 --------CMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
++D + G V +A E F ++V +WN+ML L+ F
Sbjct: 277 RVDSYLTTGLVDLYAKCGCVEIARETFESCTNKDVFTWNAMLVGFAIHGQGLVLLEYFSR 336
Query: 142 MMESGEAV-PNEATLVSVLTACAHLGKLSVGMWVHSFIKS-NNIKVDVLLSTCLLTMYVK 199
M+ GE + P+ T + VL C+H G + V +++ + + C+ M +
Sbjct: 337 MV--GEGIKPDGVTFLGVLVGCSHAGLVCEARKVFDEMETVYGVAREGKHYGCMADMLAR 394
Query: 200 CGAMDLARDVFDEMP-VRNVVSWNSMIMGYGLHGNGE---KALELFLEMEKKGPKPNDAT 255
G ++ +R++ MP +V +W ++ G +HGN E +A + +E+ KP D
Sbjct: 395 AGLIEESRELIKGMPNGGDVFAWGGLLGGCRIHGNVEIAKQAAQQVMEI-----KPEDGG 449
Query: 256 FVCVLS 261
V++
Sbjct: 450 VYSVMA 455
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 37/240 (15%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
AL FN +P ++N+++ +H S LK+F + + + T +L A +
Sbjct: 66 ALSLFNSIPNPTTFTFNTLIRIHTLLSSPLSALKIFLSLRRLFLTL-DFHTFPLILKASS 124
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
L LS+ +HS + VD + L+ +Y ++ A VF E R++VS+N
Sbjct: 125 QLHSLSLAQSLHSQVFKYGFLVDSFVMNSLIRVYSVNDRVNDAYKVFCESGYRDIVSYNV 184
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPK-------------------------------PN 252
MI G+ + ++A ELF EM ++ P+
Sbjct: 185 MIDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELFNEMIGLEFIPD 244
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY--GCIVDLLARAGLVKNSEE 310
+ V VLSAC G + +G + D + R +V+ Y +VDL A+ G V+ + E
Sbjct: 245 NIALVSVLSACAQLGELEQGRFVHDYITRN---GIRVDSYLTTGLVDLYAKCGCVEIARE 301
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 227/398 (57%), Gaps = 8/398 (2%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIA 62
+ G VS F S L+ +++ S+ G T A+K+F M +D+ WN +I+
Sbjct: 278 QIHGLVSRLGFEFGSVLSNTIITMYSLF------GYTDMAKKVFSGMGNKDLVTWNSLIS 331
Query: 63 GYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
GY+ +++AA E+FERMP++D++SW MI G G + A+E F+ + ++ W +
Sbjct: 332 GYIYNNEVDAAYEVFERMPEKDLISWTAMIRGFATDGRIGKAVELFDTLKEKDDFVWTVL 391
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
++ V + + E L F M + PN T+ SVL+A A L L+ G+ +HS + N
Sbjct: 392 ISGFVSNEEYEEALHWFVRMSRE-QCRPNPLTISSVLSASASLVALNEGLQIHSHVLKMN 450
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
++ D+ + L++ Y KCG + A +F ++ NVVS+NS+I G+ +G GE+AL ++
Sbjct: 451 LEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQNGFGEEALSMYK 510
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
M+ + +PN TF+ VLSACTHAG++ EGW F+ M+ Y IEP+ +HY C+VDLL RA
Sbjct: 511 RMQNESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSRYGIEPEADHYACMVDLLGRA 570
Query: 303 GLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIML 362
GL+ + ++ + ++ C H +L ++ A+ + ELEP + PY++L
Sbjct: 571 GLLDEAIHFVRSMPLEPHSGVWGALLAASC-AHQRIDLAKLAAQHITELEPANATPYVVL 629
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
SNTY+A G+ + + VR KG++K S + ++D
Sbjct: 630 SNTYSASGQKFEGDLVRKTKNLKGIKKSPGCSWITIKD 667
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 138/283 (48%), Gaps = 36/283 (12%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNG----------------------- 37
+Y+ G+++ AR LFD +YN+MI G+++NG
Sbjct: 70 VYAQNGQITTARKLFDEMPERTTATYNAMISGYIRNGCNVTKAYELFTSFHDRNEVSYAA 129
Query: 38 ---------ETGAARKLFDEMP--VRDVWNWNCMIAGYVAVGDLEAANELFERM--PDRD 84
+ A KL+ E P RD N +I GY+ +G++ A +FE + RD
Sbjct: 130 MIMGLVKARKFDLAEKLYREAPHEFRDPVCSNALINGYLKIGEMNEALRVFENVGVSKRD 189
Query: 85 VVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME 144
VVSW+ ++ G R G + A F+RMP RNVVSW++M+ ++ F +F +M
Sbjct: 190 VVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRR 249
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
G N T+ ++ C + G++ G+ +H + + +LS ++TMY G D
Sbjct: 250 EGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTD 309
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
+A+ VF M +++V+WNS+I GY + + A E+F M +K
Sbjct: 310 MAKKVFSGMGNKDLVTWNSLISGYIYNNEVDAAYEVFERMPEK 352
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 132/259 (50%), Gaps = 9/259 (3%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N I + +NG AA +F+ M +++ W M+ Y G + A +LF+ MP+R
Sbjct: 34 NVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTA 93
Query: 87 SWNCMIDGCVRVG-NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM-ME 144
++N MI G +R G NV A E F RN VS+ +M+ V+A+ F K++ E E
Sbjct: 94 TYNAMISGYIRNGCNVTKAYELFTSFHDRNEVSYAAMIMGLVKARKFDLAEKLYREAPHE 153
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
+ V + A + L +G+++ + V + + K DV+ + ++ + G +D
Sbjct: 154 FRDPVCSNALINGYL----KIGEMNEALRVFENVGVS--KRDVVSWSAVVGGLCRDGRID 207
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG-PKPNDATFVCVLSAC 263
AR +FD MP RNVVSW++MI GY G E LFL+M ++G + N T ++ C
Sbjct: 208 NARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGC 267
Query: 264 THAGMVMEGWWYFDLMRRV 282
+ G V EG L+ R+
Sbjct: 268 GNCGRVKEGIQIHGLVSRL 286
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 215/398 (54%), Gaps = 6/398 (1%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP--VRDVWNWNCMIAG 63
G A L F+ VS++ MI G +NG+T ARK FD++P ++DV W M+ G
Sbjct: 131 GDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTVMVDG 190
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
Y G++E A E+FE MP+R+ W+ M+ G + G+V A F R+P RN+ WNSM+
Sbjct: 191 YAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMI 250
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI 183
A +V+ + L+ F EM G P+E T+VSVL+ACA LG L G +H I+ I
Sbjct: 251 AGYVQNGCGEKALEAFGEMGVDGFE-PDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGI 309
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
V+ + + L+ MY KCG + AR VF+ RNV WN+MI G+ ++G + LE
Sbjct: 310 AVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDR 369
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
M++ + + TF+ VLSAC H G++ E M Y IE + HYGC+VDLL RAG
Sbjct: 370 MQESNIRLDAVTFITVLSACAHGGLMSEALEVISKMEE-YGIEMGIRHYGCMVDLLGRAG 428
Query: 304 LVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY-IML 362
+K + ELIK + +K C H D ++ E V K + + + ++L
Sbjct: 429 KLKEAYELIKRMPMK-PNETVLGAMIGACWIHSDMKMAEQVMKMIGADSAACVNSHNVLL 487
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
SN YAA +W+ E +R + + G +K S + L +
Sbjct: 488 SNIYAASEKWEKAEMIRSSMVDGGSEKIPGYSSIILSN 525
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 97/218 (44%), Gaps = 40/218 (18%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D DV ++ + G V A + F+ MP RNVV+WN+M+ ++R L F+E
Sbjct: 83 DVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEE 142
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKC 200
M P + T VS + + F ++ DV++ T ++ Y K
Sbjct: 143 M-------PGK-TRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTVMVDGYAKK 194
Query: 201 GAMDLARDVFDEM-------------------------------PVRNVVSWNSMIMGYG 229
G M+ AR+VF+ M PVRN+ WNSMI GY
Sbjct: 195 GEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYV 254
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
+G GEKALE F EM G +P++ T V VLSAC G
Sbjct: 255 QNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLG 292
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 113/254 (44%), Gaps = 40/254 (15%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ G + DAR +F+ + ++SM+ G+ K G+ A +F +PVR++ WN MI
Sbjct: 191 YAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMI 250
Query: 62 AGYVAVGDLEAANELFERM------PDR-DVVS--------------------------- 87
AGYV G E A E F M PD VVS
Sbjct: 251 AGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIA 310
Query: 88 -----WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
+ +ID + G++ A F RNV WN+M+A E L+ D M
Sbjct: 311 VNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRM 370
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
ES + + T ++VL+ACAH G +S + V S ++ I++ + C++ + + G
Sbjct: 371 QESNIRL-DAVTFITVLSACAHGGLMSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGK 429
Query: 203 MDLARDVFDEMPVR 216
+ A ++ MP++
Sbjct: 430 LKEAYELIKRMPMK 443
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/443 (31%), Positives = 236/443 (53%), Gaps = 42/443 (9%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM- 80
+L+ N ++ +V++ A LFDEMP RD W+ M+ G+ +GD F +
Sbjct: 34 NLIVANKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKLGDYNNCYATFREIL 93
Query: 81 -----PD-----------------------RDVV--------SWNC--MIDGCVRVGNVP 102
PD DVV + C ++D + +
Sbjct: 94 RCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIE 153
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
A + F+ M ++++V+W M+ + ++ E L +FD + E G V ++ +V+V+ AC
Sbjct: 154 DARKLFDVMVSKDLVTWTVMIGCYADYDAY-ESLVLFDRLREEG-FVSDKVAMVTVVNAC 211
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
A LG + +V+ +I N + +DV+L T ++ MY KCG +D AR+VFD M +NV+SW+
Sbjct: 212 AKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWS 271
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
+MI YG HG G++AL+LF M G PN TFV +L AC+H+G+ EG +FD M R
Sbjct: 272 AMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDEGLHFFDSMWRD 331
Query: 283 YNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGE 342
Y + P V+HY C+VDLL RAG + + +LI+ ++V+ C H + EL
Sbjct: 332 YGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVE-KDERLWSALLGACRVHGNMELAG 390
Query: 343 IVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFE 402
VA+ L+EL+P + G Y++LSN YA G+W+ V R ++ ++ L+K + + +++
Sbjct: 391 KVAESLLELQPKNPGIYVLLSNIYAKAGKWEKVGEFRDLMTQRKLKKVPGWTWIEVDNKT 450
Query: 403 SKYFVKNYSVHRKRIMYSMLSEL 425
++ V + S + + +Y ML+ +
Sbjct: 451 YQFSVGDRSHPQSKEIYEMLTSV 473
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 15/262 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWN 56
MY+ + DAR LFD ++ DLV++ MI G + + + LFD + V D
Sbjct: 145 MYAKCAVIEDARKLFDVMVSKDLVTWTVMI-GCYADYDAYESLVLFDRLREEGFVSDKVA 203
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ +G + A + E + DV+ MID + G V A E F+RM
Sbjct: 204 MVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMK 263
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+NV+SW++M+A + E L +F M+ G + PN T VS+L AC+H G G+
Sbjct: 264 EKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGIS-PNRITFVSLLYACSHSGLTDEGL 322
Query: 173 -WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGL 230
+ S + ++ DV TC++ + + G +D A + + M V ++ W++++ +
Sbjct: 323 HFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLGACRV 382
Query: 231 HGNGE---KALELFLEMEKKGP 249
HGN E K E LE++ K P
Sbjct: 383 HGNMELAGKVAESLLELQPKNP 404
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
VH+ N +++++ LL YV+ A++ A +FDEMP R+ +W+ M+ G+ G+
Sbjct: 22 VHANALINGTFNNLIVANKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKLGD 81
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
F E+ + P++ T V+ AC + G D++ + + ++H+
Sbjct: 82 YNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLV---LDHFV 138
Query: 294 C--IVDLLARAGLVKNSEELI 312
C +VD+ A+ +++++ +L
Sbjct: 139 CATLVDMYAKCAVIEDARKLF 159
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 191/330 (57%), Gaps = 5/330 (1%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
DV+ + +I + G + A ++F+ +R+VV W ++ G G V + F++MP
Sbjct: 139 DVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDKMP 198
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP----NEATLVSVLTACAHLGKL 168
RN S ++M++ +VR F E +++F E+ + + N A LVSVL AC +G
Sbjct: 199 QRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAF 258
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
G W+HS+++ N ++ D+ L T L+ Y KCG + A VFD+M V++V +W++MI+G
Sbjct: 259 EEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMILGL 318
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
++GN + ALELF +MEK GPKPN+ TFV VL+AC H + E F +M YNI P
Sbjct: 319 AINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPS 378
Query: 289 VEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRL 348
+EHYGCIVD+LAR+G VK + I + ++ C H ELG+ V K L
Sbjct: 379 IEHYGCIVDILARSGQVKKALIFINSMHIE-PDGAIWGSLLNGCLMHGHYELGQKVGKYL 437
Query: 349 IELEPMDIGPYIMLSNTYAAQGRWDDVERV 378
IE +P G Y++L+N YA G+W+ V V
Sbjct: 438 IEFDPEHSGRYVLLANMYANMGKWEGVSEV 467
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 12/257 (4%)
Query: 68 GDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHV 127
GD A LF MP+ ++ +N +I +L F +M N+ + V
Sbjct: 56 GDFRYAETLFTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLV 115
Query: 128 RAKSFWECL-KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD 186
++ L ++F M+SG + + + SV+ + G + + V F +S+N +
Sbjct: 116 KSCVTLSSLEQVFTLTMKSGNS-SDVYFVSSVINVFSKHGAIHLARQV--FDESSN--RN 170
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
V+ T L++ Y CG ++ RDVFD+MP RN S ++M+ GY + + ++LF E++K
Sbjct: 171 VVCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKK 230
Query: 247 KGP-----KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
K K N A V VL+ACT G EG W + +E +E ++D A+
Sbjct: 231 KDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIHSYVEE-NGLEYDLELGTALIDFYAK 289
Query: 302 AGLVKNSEELIKYVSVK 318
G VK++E++ + VK
Sbjct: 290 CGWVKDAEKVFDKMLVK 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y G V++ R +FD + S ++M+ G+V+N +LF E+ +D
Sbjct: 181 YCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKF 240
Query: 62 AGYVAVGDLEAANEL--FERMP-----------DRDVVSWNCMIDGCVRVGNVPLALEFF 108
G + V L A + FE + D+ +ID + G V A + F
Sbjct: 241 NGALLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVF 300
Query: 109 NRMPARNVVSWNSM-LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH--- 164
++M ++V +W++M L L + + L++F++M + G PNE T V VLTAC H
Sbjct: 301 DKMLVKDVATWSAMILGLAINGNNKM-ALELFEKMEKVGPK-PNEVTFVGVLTACNHKSL 358
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNS 223
G+ S + S + NI + C++ + + G + A + M + + W S
Sbjct: 359 FGESSRLFGIMS--EKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGS 416
Query: 224 MIMGYGLHGN---GEKALELFLEME 245
++ G +HG+ G+K + +E +
Sbjct: 417 LLNGCLMHGHYELGQKVGKYLIEFD 441
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/430 (30%), Positives = 228/430 (53%), Gaps = 41/430 (9%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D + N+ + G+ K G A +F M + V +WN +I G+V G A +L+ M
Sbjct: 435 DELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMR 494
Query: 82 ----DRDVVSWNCMIDGCVRV-----------------------------------GNVP 102
+ D+ + ++ C R+ G +
Sbjct: 495 GSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKIL 554
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
LA FF+ M +N+V WN+M+ + + ++ L MF +M+ S + P+E +++ L AC
Sbjct: 555 LAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSS-KIWPDEISIIGALGAC 613
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
+ + L +G +H F +++ ++ L+ MY KCG M+ ++++FD + ++ V+WN
Sbjct: 614 SQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWN 673
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
+I GYG+HG+G KA+ELF M+ G +P+ TF+ +L+AC HAG+V EG Y M+ +
Sbjct: 674 VLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSL 733
Query: 283 YNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGE 342
+ I+PK+EHY C+VD+L RAG + + EL+ + K C + D ++GE
Sbjct: 734 FGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDK-PDSRIWSSLLSSCRNYRDLDIGE 792
Query: 343 IVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFE 402
VA +L+EL P Y+++SN YA G+WD+V ++R ++E GLQK+A S + +
Sbjct: 793 KVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKV 852
Query: 403 SKYFVKNYSV 412
S++ V + S+
Sbjct: 853 SRFLVGDESL 862
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 142/275 (51%), Gaps = 14/275 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP-----VRDVW 55
MYS+ D+ L+F++S +L +N+++ G+++N A +F EM V D +
Sbjct: 138 MYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNF 197
Query: 56 NWNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
C+I V V D+ + + DV N +I + G V A++ F++M
Sbjct: 198 TLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKM 257
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV-PNEATLVSVLTACAHLGKLSV 170
P RN+VSWNS++ + F E +F ++ E + P+ AT+V+V+ CA G++ +
Sbjct: 258 PQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRL 317
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
GM H + ++ +++ LL MY KCG + AR +FD +NV+SWNSMI GY
Sbjct: 318 GMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGYSK 376
Query: 231 HGNGEKALELF--LEMEKKGPKPNDATFVCVLSAC 263
+ A EL ++ME K K N+ T + VL C
Sbjct: 377 DRDFRGAFELLRKMQMEDK-VKVNEVTLLNVLPVC 410
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 160/328 (48%), Gaps = 13/328 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN-C 59
MYS G + +AR+LFD++ +++S+NSMI G+ K+ + A +L +M + D N
Sbjct: 343 MYSKCGYLCEARVLFDTN-EKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEV 401
Query: 60 MIAGYVAVGDLEA---------ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ + V + E L D + N + G + G++ A F
Sbjct: 402 TLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCG 461
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M ++ V SWN+++ HV+ + L ++ M SG P+ T+ S+L+ACA L LS
Sbjct: 462 MESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLE-PDLFTIASLLSACARLKSLSC 520
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G +H + N ++D + L+++YV+CG + LA+ FD M +N+V WN+MI G+
Sbjct: 521 GKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQ 580
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
+ AL++F +M P++ + + L AC+ + G + + E
Sbjct: 581 NEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFV 640
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVK 318
++D+ A+ G ++ S+ + V +K
Sbjct: 641 TCS-LIDMYAKCGCMEQSQNIFDRVHLK 667
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
FN +N+ WN++L+ ++R F + + +F EM+ E VP+ TL V+ AC +
Sbjct: 152 FNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYD 211
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+ +G VH F + DV + L+ MY K G ++ A VFD+MP RN+VSWNS++
Sbjct: 212 VRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYA 271
Query: 228 YGLHGNGEKALELF--LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
+G E++ LF L +G P+ AT V V+ C G V G + L ++
Sbjct: 272 CLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKL 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y G++ A+L FD+ +LV +N+MI+G +N A +F +M +W
Sbjct: 546 LYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEIS 605
Query: 61 IAGYVA----VGDLEAANELF-----ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
I G + V L EL + + V+ + +ID + G + + F+R+
Sbjct: 606 IIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCS-LIDMYAKCGCMEQSQNIFDRV 664
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
+ V+WN ++ + + +++F M +G P+ T +++LTAC H G ++ G
Sbjct: 665 HLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAG-FRPDSVTFIALLTACNHAGLVAEG 723
Query: 172 MWVHSFIKS-NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMI 225
+ ++S IK + C++ M + G ++ A ++ +E+P + + W+S++
Sbjct: 724 LEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLL 779
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMY 197
++++ S + P + + +L C + +G +H+FI ++ + + DV+L T L+TMY
Sbjct: 81 LNDVVSSSNSKPKQLIGL-LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMY 139
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATF 256
C + + VF+ +N+ WN+++ GY + A+ +F+EM P++ T
Sbjct: 140 SICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTL 199
Query: 257 VCVLSAC 263
CV+ AC
Sbjct: 200 PCVIKAC 206
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 219/378 (57%), Gaps = 9/378 (2%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFE----RMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
D + N +I Y G + A +F+ + D DVV+ N MI G + G + + F
Sbjct: 161 DQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLF 220
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
+ M R VSWNSM++ +VR E L++F++M G V +E T+VS+L ACAHLG L
Sbjct: 221 DDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEV-SEFTMVSLLNACAHLGAL 279
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
G WVH +IK N+ +++V++ T ++ MY KCG+++ A +VF+ P R + WNS+I+G
Sbjct: 280 QHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGL 339
Query: 229 GLHGNGEKALELFLEME-KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
++G+ +A E F ++E K KP+ +F+ VL+AC H G + + YF+LM Y IEP
Sbjct: 340 AMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEP 399
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
++HY CIVD+L +AGL++ +EELIK + +K C H + ++ A+R
Sbjct: 400 SIKHYTCIVDVLGQAGLLEEAEELIKGMPLK-PDAIIWGSLLSSCRKHRNVQIARRAAQR 458
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFV 407
+ EL P D Y+++SN +AA ++++ R++++E +KE S + L E F+
Sbjct: 459 VYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYG-EVHEFI 517
Query: 408 KNYSVHRK-RIMYSMLSE 424
+H K + +Y +L++
Sbjct: 518 AGGRLHPKTQEIYHLLND 535
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 128/251 (50%), Gaps = 8/251 (3%)
Query: 68 GDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV----VSWNSML 123
G++ A +LF RMP+ ++ SWN +I R A+ F M + +++ S+
Sbjct: 75 GNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVF 134
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLV-SVLTACAHLGKLSVGMWVHSFIKSNN 182
+ + ++ +++ G + N+ + +++ A+ G +S V K
Sbjct: 135 KAYAQLGHAHYGAQLHGRVVKLG--LQNDQFICNTIIYMYANGGLMSEARRVFDGKKLEL 192
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
DV+ ++ Y KCG +D +R++FD+M R VSWNSMI GY +G +ALELF
Sbjct: 193 YDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFN 252
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
+M+ +G + ++ T V +L+AC H G + G W D ++R + E V I+D+ +
Sbjct: 253 KMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNH-FELNVIVVTAIIDMYCKC 311
Query: 303 GLVKNSEELIK 313
G V+N+ E+ +
Sbjct: 312 GSVENAVEVFE 322
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 158/364 (43%), Gaps = 58/364 (15%)
Query: 1 MYSVFGRVSDARLLFDSS-LTL---DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN 56
MY+ G +S+AR +FD L L D+V+ NSMI G+ K GE +R LFD+M R +
Sbjct: 171 MYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVS 230
Query: 57 WNCMIAGYVAVGDLEAANELFERMP----------------------------------- 81
WN MI+GYV G L A ELF +M
Sbjct: 231 WNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIK 290
Query: 82 ----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
+ +V+ +ID + G+V A+E F P R + WNS++ E +
Sbjct: 291 RNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFE 350
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM-WVHSFIKSNNIKVDVLLSTCLLTM 196
F ++ S P+ + + VLTAC HLG ++ + + I+ + TC++ +
Sbjct: 351 FFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDV 410
Query: 197 YVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGPKPN 252
+ G ++ A ++ MP++ + + W S++ H N +A + E+ P+
Sbjct: 411 LGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRVYEL-----NPS 465
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRR--VYNIEP---KVEHYGCIVDLLARAGLVKN 307
DA+ ++S A E L+ + + EP +E YG + + +A L
Sbjct: 466 DASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFIAGGRLHPK 525
Query: 308 SEEL 311
++E+
Sbjct: 526 TQEI 529
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 185/299 (61%), Gaps = 2/299 (0%)
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
+A + F++MP R+VV+WN+M++ + E + +F +M E G P+ AT VSV +AC
Sbjct: 169 VARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMG-VCPDSATFVSVSSAC 227
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
+ +G L +G WV+ I SN I+V+V+L T L+ M+ +CG + AR VFD + NV++W
Sbjct: 228 SQIGSLELGCWVYDSIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWT 287
Query: 223 SMIMGYGLHGNGEKALELFLEMEK-KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
+MI GYG+HG G +A+ELF EM+K +G PN TFV VLSAC HAG++ EG F MR
Sbjct: 288 AMISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMRE 347
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELG 341
Y + P +EH+ C+VD+L +AGL+ + + IK + C H + +LG
Sbjct: 348 EYGLVPGLEHHVCMVDMLGKAGLLTEAYQFIKELCPVEHVPAVWTAMLGACKMHKNYDLG 407
Query: 342 EIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
A+ LI LEP + Y++LSN YA GR D VE VR ++ ++G++K+A S + + +
Sbjct: 408 VEAAQHLISLEPENPSNYVLLSNMYALAGRMDRVESVRNVMIQRGIKKQAGYSSIDVNN 466
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
F M S P+ T SV ACAHL L +G +HS + + + + ++ Y
Sbjct: 102 FFYRRMLSSPHKPSSYTFTSVFKACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFY 161
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
K A+ +AR VFD+MP R+VV+WN+MI GY +G +A+ LF +M + G P+ ATFV
Sbjct: 162 AKSSALCVARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFV 221
Query: 258 CVLSACTHAGMVMEGWWYFDLMRRVYN-IEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
V SAC+ G + G W +D + V N I V ++++ +R G V+ + + +S
Sbjct: 222 SVSSACSQIGSLELGCWVYDSI--VSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSIS 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 14/253 (5%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLF---DEMPV-RDVWNWNCMIAGYVA 66
AR +FD +V++N+MI G+ NG A LF +EM V D + + +
Sbjct: 170 ARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQ 229
Query: 67 VGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
+G LE +++ + +V+ +I+ R G+V A F+ + NV++W +M
Sbjct: 230 IGSLELGCWVYDSIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAM 289
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
++ + E +++F EM + VPN T V+VL+ACAH G + G V + ++
Sbjct: 290 ISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMREEY 349
Query: 183 IKVDVL-LSTCLLTMYVKCGAMDLARDVFDEM-PVRNVVS-WNSMIMGYGLHGN---GEK 236
V L C++ M K G + A E+ PV +V + W +M+ +H N G +
Sbjct: 350 GLVPGLEHHVCMVDMLGKAGLLTEAYQFIKELCPVEHVPAVWTAMLGACKMHKNYDLGVE 409
Query: 237 ALELFLEMEKKGP 249
A + + +E + P
Sbjct: 410 AAQHLISLEPENP 422
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/462 (31%), Positives = 232/462 (50%), Gaps = 33/462 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY + RL+FD + +N+MI G+V+N A +LF EM + N +
Sbjct: 332 MYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSV 391
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSW---------NCMIDGCVRVGNVPLALEFFNRM 111
V + + L + VV W N ++D R+G + +A F M
Sbjct: 392 TLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSM 451
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA------------------VPNEA 153
+++VSWN+M+ +V + L + +M + G+A PN
Sbjct: 452 NRKDIVSWNTMITGYVVCGRHDDALNLLHDM-QRGQAEHRINTFDDYEDNKNFPLKPNSV 510
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
TL++VL CA L L G +H++ + DV + + L+ MY KCG ++L+R VF++M
Sbjct: 511 TLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQM 570
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-----KPNDATFVCVLSACTHAGM 268
VRNV++WN +IM YG+HG GE+AL+LF M ++G +PN+ T++ + ++ +H+GM
Sbjct: 571 SVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGM 630
Query: 269 VMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXX 328
V EG F M+ + IEP +HY C+VDLL R+G ++ + LIK +
Sbjct: 631 VDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSL 690
Query: 329 XXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQ 388
C H + E+GEI AK L L+P Y++LSN Y++ G WD VR ++EKG++
Sbjct: 691 LGACKIHQNLEIGEIAAKNLFVLDPNVASYYVLLSNIYSSAGLWDQAIDVRKKMKEKGVR 750
Query: 389 KEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
KE S + D K+ + S + + ++ L L +K
Sbjct: 751 KEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHEYLETLSLRMK 792
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 125/278 (44%), Gaps = 42/278 (15%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE-------- 78
NS ++ + K G+ AAR++FDE+ RD +WN MI + E A LF
Sbjct: 124 NSFVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG 183
Query: 79 -------------------------------RMPDRDVVSWNCMIDGCVRVGNVPLALEF 107
R D + N ++ ++G V A
Sbjct: 184 PTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTL 243
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+ +++VSWN++++ + F E L M++SG PN TL SVL AC+HL
Sbjct: 244 FDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG-VRPNGVTLASVLPACSHLEM 302
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTC-LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L G +H+F+ NN ++ C L+ MY C + R VFD M R + WN+MI
Sbjct: 303 LGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIA 362
Query: 227 GYGLHGNGEKALELFLEME-KKGPKPNDATFVCVLSAC 263
GY + +A+ELF+EM + G PN T VL AC
Sbjct: 363 GYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPAC 400
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 3/182 (1%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
N ++ + G++ A F+ + R+ VSWNSM+ R + WE +M
Sbjct: 124 NSFVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEE-WELAVHLFRLMLLENV 182
Query: 149 VPNEATLVSVLTACAHL-GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLAR 207
P TLVSV AC++L L +G VH+F+ N + L+TMY K G + A+
Sbjct: 183 GPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAK 241
Query: 208 DVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
+FD +++VSWN++I + E+AL M + G +PN T VL AC+H
Sbjct: 242 TLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLE 301
Query: 268 MV 269
M+
Sbjct: 302 ML 303
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 110 RMPARNVVSWNSMLALHVRAKS-FWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
R+P+ W S L ++ S F + + + M+ +G P+ +VL A A + L
Sbjct: 47 RLPSE----WVSHLRSQTQSSSTFHQAISTYTNMVTAG-VPPDNFAFPAVLKATAGIQDL 101
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
++G +H+ + + + + MY KCG +D AR VFDE+ R+ VSWNSMI
Sbjct: 102 NLGKQLHAHVFKFGQALPTAVPNSFVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAA 161
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
E A+ LF M + P T V V AC++
Sbjct: 162 CRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSN 198
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 215/402 (53%), Gaps = 48/402 (11%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGY-VAVGDLEAANELFERM-----PDRDVVSW------- 88
A +FD++P D + WN MI G+ + A F+RM PD S+
Sbjct: 63 ALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAHRPDNFTFSFILKIIAR 122
Query: 89 --------------------------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
N +I + ++ +A + F M N+VSWNS+
Sbjct: 123 LRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSI 182
Query: 123 LALHVRAKSFWECLKMFDEMMESG----EAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
+ HV + E + +F +M++ E P+ ATLV L+AC +G L G VHSF+
Sbjct: 183 IDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFV 242
Query: 179 KS--NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
+ N+ + + L+ MY KCGA++ A + F M +NVVSWN MI+G+ HGNGE+
Sbjct: 243 RDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEE 302
Query: 237 ALELFLEM-EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
AL LF M + +P++ TF+CVL AC+H G+V EG YF++M R YNI+P ++HYGC+
Sbjct: 303 ALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCM 362
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
VDLL RAGL + ELIK + V+ C + + ELGE V K L+ELEP
Sbjct: 363 VDLLGRAGLFVEAYELIKSMPVE-CNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDH 421
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQK-EAASSVV 396
Y++L+N YA+ G+W+++ + R ++E+ ++K E +S +
Sbjct: 422 SSDYVLLANMYASTGQWNEMSKERRSMQERRVRKPEPGNSFI 463
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 119/265 (44%), Gaps = 20/265 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-------- 52
MY + + A LF+ +LVS+NS+ID HV G+ A LF +M +
Sbjct: 154 MYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQ 213
Query: 53 -DVWNWNCMIAGYVAVGDLEAANELFERMPD------RDVVSWNCMIDGCVRVGNVPLAL 105
D ++ A+G L+ ++ + D + +N ++D + G V A
Sbjct: 214 PDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAY 273
Query: 106 EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
E F+ M +NVVSWN M+ + E L +F M+ P+E T + VL AC+H
Sbjct: 274 ETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHG 333
Query: 166 GKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNS 223
G + G + + NIK + C++ + + G A ++ MPV N + W +
Sbjct: 334 GLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRT 393
Query: 224 MIMGYGLHGN---GEKALELFLEME 245
++ +GN GEK + +E+E
Sbjct: 394 LLAACRNYGNVELGEKVRKHLMELE 418
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 7/222 (3%)
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
C N+ AL F+++P + WN+M+ + + F + M+ P+ T
Sbjct: 54 CAVSQNMNYALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAHR-PDNFT 112
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
+L A L +++G +H + + + L+ MY +++A +F+EM
Sbjct: 113 FSFILKIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMY 172
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-----KPNDATFVCVLSACTHAGMV 269
N+VSWNS+I + G +A++LF +M ++ +P+ AT V LSAC G +
Sbjct: 173 QPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSL 232
Query: 270 MEGWWYFDLMRR-VYNIEPKVEHYGCIVDLLARAGLVKNSEE 310
G +R V + + + +VD+ A+ G V+ + E
Sbjct: 233 DFGRKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYE 274
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 99/241 (41%), Gaps = 31/241 (12%)
Query: 5 FGR-----VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC 59
FGR V D F S+++ +N+++D + K G A + F M ++V +WN
Sbjct: 234 FGRKVHSFVRDGVNSFGESISV----FNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNV 289
Query: 60 MIAGYVAVGDLEAANELFERMPDRDV-----VSWNCMIDGCVRVGNVPLALEFFNRMP-- 112
MI G+ + G+ E A LF RM +V +++ C++ C G V +F M
Sbjct: 290 MILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRD 349
Query: 113 ---ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+ + M+ L RA F E E+++S N ++L AC + G +
Sbjct: 350 YNIKPTIKHYGCMVDLLGRAGLFVEAY----ELIKSMPVECNAIIWRTLLAACRNYGNVE 405
Query: 170 VGMWV--HSFIKSNNIKVDVLLSTCLLTMYVKCGA---MDLARDVFDEMPVRNVVSWNSM 224
+G V H + D +L L MY G M R E VR NS
Sbjct: 406 LGEKVRKHLMELEPDHSSDYVL---LANMYASTGQWNEMSKERRSMQERRVRKPEPGNSF 462
Query: 225 I 225
I
Sbjct: 463 I 463
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 212/378 (56%), Gaps = 37/378 (9%)
Query: 53 DVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
D + N +I Y + G LE A ++F+RM + W
Sbjct: 119 DTYICNSLIHFYASCGYLETARKVFDRMCE-----W------------------------ 149
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
RNVVSWN M+ + + + L MF EMM+ E P+ T+ SV+ AC LG LS+GM
Sbjct: 150 -RNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKVYE--PDCYTMQSVIRACGGLGSLSLGM 206
Query: 173 WVHSFIKSN---NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
WVH+F+ N+ DVL++TCL+ MY KCG++++A+ VF+ M R+V SWNS+I+G+
Sbjct: 207 WVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFA 266
Query: 230 LHGNGEKALELFLEMEK-KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
+HG + AL+ F+ M K + PN TFV VLSAC H+GMV EG YF++M + YN+EP
Sbjct: 267 VHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPS 326
Query: 289 VEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRL 348
+ HYGC+VDL ARAG ++ + ++ + +K H EL E +AK++
Sbjct: 327 LVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQI 386
Query: 349 IELE-PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFV 407
E + G Y++LS YA+ RW+DV +R ++ +KG+ K+ S++ + ++F
Sbjct: 387 FESNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFA 446
Query: 408 KNYSVHRKRIMYSMLSEL 425
+ + + + +Y ++E+
Sbjct: 447 GDTNHPQSKDIYKFMNEI 464
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 28/266 (10%)
Query: 1 MYSVFGRVSDARLLFDSSLT-LDLVSYNSMIDGHVKNGETGAARKLFDEM-----PVRDV 54
Y+ G + AR +FD ++VS+N MID + K G+ +F EM P D
Sbjct: 129 FYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKVYEP--DC 186
Query: 55 WNWNCMIAGYVAVGDLEAA---NELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEF 107
+ +I +G L + + D+ DV+ C++D + G++ +A +
Sbjct: 187 YTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQV 246
Query: 108 FNRMPARNVVSWNSML---ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
F M R+V SWNS++ A+H +AK+ L F M++ + VPN T V VL+AC H
Sbjct: 247 FEGMSYRDVSSWNSIILGFAVHGKAKA---ALDYFVRMVKVEKIVPNSITFVGVLSACNH 303
Query: 165 LGKLSVG-MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWN 222
G + G M+ K N++ ++ CL+ +Y + G + A +V EMP++ + V W
Sbjct: 304 SGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWR 363
Query: 223 SMIMG-YGLHGNGEKALELFLEMEKK 247
S++ Y H ++EL EM K+
Sbjct: 364 SLLDACYKQHA----SVELSEEMAKQ 385
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
+ E P++ T VL ACA+L L G VH+ + ++D + L+ Y CG +
Sbjct: 77 QENELFPDKHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYL 136
Query: 204 DLARDVFDEM-PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+ AR VFD M RNVVSWN MI Y G+ + L +F EM K +P+ T V+ A
Sbjct: 137 ETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEM-MKVYEPDCYTMQSVIRA 195
Query: 263 CTHAGMVMEGWWY--FDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
C G + G W F L + N+ V C+VD+ + G ++ ++++ + +S +
Sbjct: 196 CGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYR 253
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 216/423 (51%), Gaps = 18/423 (4%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
L +L N +I + K G AR++FDEM +DV +WN M+AGY + A E+
Sbjct: 150 LDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICR 209
Query: 79 RMPDRDVVSWNCMIDGCVRVG-----------NVPLALEFFNRMPARNVVSWNSMLALHV 127
M D + DGC NV + F + +N++SWN M+ +++
Sbjct: 210 EMED-----YGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYM 264
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDV 187
+ + + ++ +M E P+ T SVL AC L L +G +H +++ + ++
Sbjct: 265 KNSLPTQAVDLYLQM-EKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNL 323
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
LL L+ MY +CG +D A+ VFD M R+V SW S+I YG+ G G A+ LF EM
Sbjct: 324 LLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNS 383
Query: 248 GPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKN 307
G P+ FV +LSAC+H+G++ EG YF M Y I P++EHY C+VDLL RAG V
Sbjct: 384 GQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDE 443
Query: 308 SEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYA 367
+ +IK + ++ C + ++G + A L++L P G Y++LSN YA
Sbjct: 444 AYNIIKQMPIE-PNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYA 502
Query: 368 AQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGA 427
GRW +V +R +++ K ++K S V L + + + S + + +Y L L A
Sbjct: 503 KAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVA 562
Query: 428 HIK 430
+K
Sbjct: 563 KMK 565
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 87/164 (53%), Gaps = 1/164 (0%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
G L + F+ M RNVV +N M+ +V + + L +F EM+ G P+ T V
Sbjct: 67 GEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFR-PDNYTYPCV 125
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L AC+ L G+ +H + + ++ + L+ MY KCG + AR VFDEM ++V
Sbjct: 126 LKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDV 185
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
VSWNSM+ GY + + ALE+ EME G KP+ T ++ A
Sbjct: 186 VSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPA 229
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 135/314 (42%), Gaps = 74/314 (23%)
Query: 37 GETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMI 92
GE G RK+FDEM R+V +N MI YV + +F M + D ++ C++
Sbjct: 67 GEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVL 126
Query: 93 DGC------------------------VRVGNVPLAL-----------EFFNRMPARNVV 117
C + VGN +A+ F+ M ++VV
Sbjct: 127 KACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVV 186
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SWNSM+A + F + L++ EM + G+ P+ T+ S++ A A+
Sbjct: 187 SWNSMVAGYAHNMRFDDALEICREMEDYGQK-PDGCTMASLMPAVAN------------- 232
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
S N+ +YV+ +F + +N++SWN MI Y + +A
Sbjct: 233 TSSENV------------LYVE--------KIFVNLERKNLISWNVMIRVYMKNSLPTQA 272
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
++L+L+MEK +P+ TF VL AC ++ G + + + + P + ++D
Sbjct: 273 VDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEK-KKLCPNLLLENSLID 331
Query: 298 LLARAGLVKNSEEL 311
+ AR G + +++ +
Sbjct: 332 MYARCGCLDDAKRV 345
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%)
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+H+ I N + L L+ Y CG L R VFDEM RNVV +N MI Y +
Sbjct: 40 LHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHR 99
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+ L +F EM G +P++ T+ CVL AC+
Sbjct: 100 YDDGLLVFREMVNGGFRPDNYTYPCVLKACS 130
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 194/332 (58%), Gaps = 3/332 (0%)
Query: 68 GDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHV 127
G L A ++F MPDR+ V+WN I G ++ G + A F+RM R+VVSW ++ +
Sbjct: 163 GFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYT 222
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK-VD 186
R + L +F +M+E PNE TL++V A AHLG + + VH +++ VD
Sbjct: 223 RMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVD 282
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMP--VRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
+ + L+ +Y KCG ++ A +F EMP RN VSWNS++ GY G +A++ F +M
Sbjct: 283 IRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKM 342
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
EK G +PN F+ +LSAC+H+G+V EG +F M Y + P ++HYGC++D+L RAG
Sbjct: 343 EKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDMLGRAGR 402
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSN 364
+ +E++ V + C+ H + E+G+ V K+++E+E G Y+++SN
Sbjct: 403 LGEAEKVALEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTKKILEMEKGHGGDYVLMSN 462
Query: 365 TYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
+A+ GR+ DVER+R MI ++ + K S+V
Sbjct: 463 IFASVGRFKDVERLREMIDKRNVFKLPGYSIV 494
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 128/295 (43%), Gaps = 50/295 (16%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS +G + DA +F + V++N I G +K G+ AR +FD M VR V +W +
Sbjct: 158 MYSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLV 217
Query: 61 IAGYVAVGDLEAANELFERM-------PDR------------------------------ 83
I GY + A LF +M P+
Sbjct: 218 IDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRG 277
Query: 84 ----DVVSWNCMIDGCVRVGNVPLALEFFNRMP--ARNVVSWNSMLALHVRAKSFWECLK 137
D+ N +ID + G + A F+ MP RN VSWNS+++ + E +
Sbjct: 278 FNAVDIRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVD 337
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM-WVHSFIKSNNIKVDVLLSTCLLTM 196
F++M ++G PN +S+L+AC+H G + G+ + + + D+ C++ M
Sbjct: 338 TFEKMEKAG-VRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDM 396
Query: 197 YVKCGAMDLARDVFDEMP--VRNVVSWNSMIMGYGLHGN---GEKALELFLEMEK 246
+ G + A V E+P N V W +++ +H N G++ + LEMEK
Sbjct: 397 LGRAGRLGEAEKVALEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTKKILEMEK 451
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 86/218 (39%), Gaps = 44/218 (20%)
Query: 134 ECLKMFDEMME--SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLST 191
E LK F + + + TL + ACA+L G +H + + V + T
Sbjct: 94 ESLKFFTHTLNNLTHSLSLDSFTLTFLAHACANLDTTHFGFHLHCIVCKMGFENHVFVQT 153
Query: 192 CLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE---------------- 235
LL MY G + A VF EMP RN V+WN I G G E
Sbjct: 154 GLLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVS 213
Query: 236 ---------------KALELFLEM-EKKGPKPNDATFVCVLSACTHAGMV-----MEGWW 274
KAL LF +M E G +PN+ T + V A H G V + G+
Sbjct: 214 WTLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGY- 272
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
+ +R +N + ++DL A+ G ++++ L
Sbjct: 273 ---VEKRGFN-AVDIRIVNALIDLYAKCGCIESASGLF 306
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 234/458 (51%), Gaps = 43/458 (9%)
Query: 15 FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVA--VGDLEA 72
F L LD+ N+++ + + +K+F +MP D +WN I L+A
Sbjct: 467 FKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQA 526
Query: 73 ANELFERM-----PDR-------------DVVSWNCMIDGCV---------RVGNVPLAL 105
E M P+R V+ I + + N LA
Sbjct: 527 LKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAF 586
Query: 106 E-----------FFNRMPAR-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
F+RM R + VSWNSM++ ++ + + + + MM+ G+ + +
Sbjct: 587 YGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKL-DGF 645
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
T +VL+ACA + L GM VH+ ++ DV++ + L+ MY KCG +D A F+ M
Sbjct: 646 TFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELM 705
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW 273
PVRN+ SWNSMI GY HG+G+KAL++F M++ G P+ TFV VLSAC+H G+V EG+
Sbjct: 706 PVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGY 765
Query: 274 WYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCT 333
+F M VY + P++EH+ C+VDLL RAG VK E+ IK + + C
Sbjct: 766 KHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCR 825
Query: 334 TH-MDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAA 392
+ ++ELG+ AK LIELEP + Y++LSN +AA G W+DV R+ +R+ ++K+A
Sbjct: 826 ANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAG 885
Query: 393 SSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
S V+++D + + + K +Y L EL I+
Sbjct: 886 CSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIR 923
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 145/329 (44%), Gaps = 14/329 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN-- 58
MY + +A +F + D VS+NSMI G N A F M + N
Sbjct: 383 MYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFS 442
Query: 59 -------CMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
C G++ +G + E F+ D DV N ++ ++ + F +M
Sbjct: 443 VISTLSSCSSLGWLTLGR-QIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQM 501
Query: 112 PARNVVSWNSML-ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
P + VSWNS + AL S + LK F EMM++G PN T +++L A + L +
Sbjct: 502 PEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWR-PNRVTFINILAAVSSFSVLGL 560
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP-VRNVVSWNSMIMGYG 229
G +H+ I ++ D + LL Y KC M+ +F M R+ VSWNSMI GY
Sbjct: 561 GHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYL 620
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
G KA++L M ++G K + TF VLSAC + G R +E V
Sbjct: 621 HSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRAC-LESDV 679
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+VD+ A+ G + + + + V+
Sbjct: 680 VVGSALVDMYAKCGKIDYASRFFELMPVR 708
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 141/278 (50%), Gaps = 18/278 (6%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC-- 59
++ +G + A+++F + V+ N ++ G + + A K+F EM +D+ N
Sbjct: 279 FARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM--KDLVEINSES 336
Query: 60 ---MIAGYVAVGDLEAANE--------LFER-MPDRDVVSWNCMIDGCVRVGNVPLALEF 107
+++ + +L+ LF + D + N +++ + + A
Sbjct: 337 LVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSV 396
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F MP+++ VSWNSM++ + F E + F M +G VP+ +++S L++C+ LG
Sbjct: 397 FQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNG-MVPSNFSVISTLSSCSSLGW 455
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L++G +H + +DV +S LLT+Y + +++ + VF +MP + VSWNS I
Sbjct: 456 LTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGA 515
Query: 228 YGLH-GNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+ + +AL+ FLEM + G +PN TF+ +L+A +
Sbjct: 516 LAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVS 553
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 138/292 (47%), Gaps = 22/292 (7%)
Query: 1 MYS-VFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----- 54
MYS G + DA +FD + V++NS+I + + G+ +A KLF M + V
Sbjct: 170 MYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLR 229
Query: 55 ---WNWNCMIAGYVAVGD--LEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLAL 105
+ ++ ++ D L ++ R+ RD+ + +++G R G + A
Sbjct: 230 PNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAK 289
Query: 106 EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
F +M RN V+ N ++ R E K+F EM + E N +LV +L+
Sbjct: 290 MIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEI--NSESLVVLLSTFTEF 347
Query: 166 GKLS----VGMWVHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
L G VH+++ +S + + + L+ MY KC A+D A VF MP ++ VS
Sbjct: 348 SNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVS 407
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
WNSMI G + E+A+ F M++ G P++ + + LS+C+ G + G
Sbjct: 408 WNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG 459
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 140/306 (45%), Gaps = 48/306 (15%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
L+ + T D+ N++I+ +V+ G +ARKLFDEMP +++ +W+C+I+GY + A
Sbjct: 49 LYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEA 108
Query: 74 NELFER------MPDRDVVS------WNCMIDG---------------CVR--------- 97
LF+ +P+ V C G CV
Sbjct: 109 CSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLM 168
Query: 98 ------VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV-- 149
G++ A F+ + RN V+WNS+++++ R K+F M G +
Sbjct: 169 SMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNL 228
Query: 150 -PNEATLVSVLTACAHLGKLSVGMWVH--SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
PNE TL S++TA L + + + I+ + D+ + + L+ + + G MD A
Sbjct: 229 RPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCA 288
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
+ +F +M RN V+ N +++G GE+A ++F EM K + N + V +LS T
Sbjct: 289 KMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEF 347
Query: 267 GMVMEG 272
+ EG
Sbjct: 348 SNLKEG 353
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 34/281 (12%)
Query: 4 VFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNC 59
+F R+S+ R D VS+NSMI G++ +G A L M R D + +
Sbjct: 599 IFSRMSERR---------DEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFAT 649
Query: 60 MIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARN 115
+++ +V LE E+ + DVV + ++D + G + A FF MP RN
Sbjct: 650 VLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRN 709
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
+ SWNSM++ + R + LK+F M + G++ P+ T V VL+AC+H+G + G + H
Sbjct: 710 IYSWNSMISGYARHGHGQKALKIFTRMKQHGQS-PDHVTFVGVLSACSHVGLVDEG-YKH 767
Query: 176 --SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHG 232
S + + + +C++ + + G + D MP+ N++ W + ++G
Sbjct: 768 FKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRT-VLGACCRA 826
Query: 233 N------GEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
N G++A ++ +E+E P +A +LS AG
Sbjct: 827 NGRNTELGQRAAKMLIELE-----PQNAVNYVLLSNMHAAG 862
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 51/243 (20%)
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME------------------ 144
L L+ + +V N+++ ++VR + K+FDEM +
Sbjct: 45 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 104
Query: 145 ------------SGEAVPNEATLVSVLTACAHLGK--LSVGMWVHSFIKSNNIKVDVLLS 190
S +PN + S L AC G + +GM +H+FI D++LS
Sbjct: 105 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 164
Query: 191 TCLLTMYVKC-GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
L++MY C G++D A VFDE+ RN V+WNS+I Y G+ A +LF M+ +G
Sbjct: 165 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 224
Query: 250 ----KPNDATFVC-VLSACTHA--GMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
+PN+ T V +AC+ A G+V+ + + ++E G + DL +
Sbjct: 225 ELNLRPNEYTLCSLVTAACSLADCGLVL-----------LEQMLTRIEKSGFLRDLYVGS 273
Query: 303 GLV 305
LV
Sbjct: 274 ALV 276
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 150/455 (32%), Positives = 224/455 (49%), Gaps = 47/455 (10%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----------- 49
YS G + A LFD +LVSYNS+I G ++ A K F EM
Sbjct: 86 FYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDE 145
Query: 50 ----------PVRDVWNW--------------------NCMIAGYVAVGDLEAANELFER 79
D W N +I Y G+ ++ LF
Sbjct: 146 FTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRS 205
Query: 80 MPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMF 139
M ++D VSW M+ R + A + FN MP + VSW ++++ V+ +E L++F
Sbjct: 206 MVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVF 265
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI---KSNNIKVDVLLSTCLLTM 196
+M++ G +P T VSVL ACA + G VH I +S++ +V + L+ M
Sbjct: 266 HQMIKEG-VLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDM 324
Query: 197 YVKCGAMDLARDVFDEM-PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
Y KCG M A ++F+ M V++VVSWN++I G+ +G GE +L +F M + +PN T
Sbjct: 325 YAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVT 384
Query: 256 FVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
F+ VLSAC HAG+V G D M R Y ++PK HY ++DLL R ++ + LI+ V
Sbjct: 385 FLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKV 444
Query: 316 SVKXXXXXXX-XXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDD 374
+ C H + EL A+ L LEP + G Y+MLSN YAA GRW D
Sbjct: 445 PNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRYVMLSNIYAASGRWSD 504
Query: 375 VERVRVMIREKGLQKEAASSVVHLEDFESKYFVKN 409
R+R +++E+GL+KE A S + L++ ++ K+
Sbjct: 505 TNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKD 539
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 154/331 (46%), Gaps = 40/331 (12%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
SSL + VS S+ G + + F+ N +I Y G E+ ++
Sbjct: 15 SSLISNCVSAKSLKHGKALHSQLIKTALFFETFLA------NGLIDLYSKCGCKESIHKA 68
Query: 77 FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECL 136
F+ +P++ +WN ++ + G A + F+ MP RN+VS+NS+++ R + E +
Sbjct: 69 FDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAV 128
Query: 137 KMFDEMMES-GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLT 195
K F EM G + +E TLVS+++ C+ L + VH + +++L+ L+
Sbjct: 129 KFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALID 188
Query: 196 MYVKCGA-------------------------------MDLARDVFDEMPVRNVVSWNSM 224
Y KCG +D A VF+EMPV+ VSW ++
Sbjct: 189 AYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAAL 248
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW-YFDLMR-RV 282
I G+ +G +ALE+F +M K+G P TFV VL AC ++ G + ++R R
Sbjct: 249 ISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRS 308
Query: 283 YNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
+ V + ++D+ A+ G +K++E L +
Sbjct: 309 SDNLFNVYVFNALMDMYAKCGDMKSAENLFE 339
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 224/429 (52%), Gaps = 41/429 (9%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------PD------------- 82
A +F + +V+ WN MI GY + A L+ +M PD
Sbjct: 93 AHNVFTLLYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISK 152
Query: 83 ----RD----------------VVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
RD + N ++ G+ A + F M R++V+WNS+
Sbjct: 153 SLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSV 212
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ E L +F EM G P+ T+VS+ +ACA LG L +G VH ++
Sbjct: 213 INGFALNGKPNEALSLFREMSLKG-VEPDGFTVVSLFSACAELGALELGRRVHVYLLKVG 271
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
+ ++ ++ LL Y KCG++ A+ VF EM RNVVSW S+++G ++G GE+AL LF
Sbjct: 272 LTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGLFK 331
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
EME++ P + TFV VL AC+H GM+ EG+ YF M+ Y I P++EHYGC+VDLL+RA
Sbjct: 332 EMERQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLSRA 391
Query: 303 GLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIML 362
GLVK + E I+ + ++ CT H D LGEI L++LEP G Y++L
Sbjct: 392 GLVKRAYEYIQSMPMQ-PNAVIWRTLLGACTVHGDLSLGEIARSHLLKLEPKHSGDYVLL 450
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSML 422
SN YA++ RW DV+ VR + E G+ K S+V L + ++ + + S R + +Y++L
Sbjct: 451 SNLYASERRWSDVQTVRRSMIEDGVWKTPGYSLVELGNRVFEFTMGDRSHPRSQDVYALL 510
Query: 423 SELGAHIKL 431
++ +KL
Sbjct: 511 EKITELLKL 519
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 121/266 (45%), Gaps = 26/266 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y+ G A +F+ DLV++NS+I+G NG+ A LF EM ++ V
Sbjct: 184 IYAACGDTESAYKVFELMGERDLVAWNSVINGFALNGKPNEALSLFREMSLKGVEP---- 239
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSW-------------NCMIDGCVRVGNVPLALEF 107
G+ V A EL R V + N ++D + G++ A +
Sbjct: 240 -DGFTVVSLFSACAELGALELGRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQV 298
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFW-ECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+ M RNVVSW S L + + F E L +F E ME + VP E T V VL AC+H G
Sbjct: 299 FSEMSERNVVSWTS-LVVGLAVNGFGEEALGLFKE-MERQKIVPREITFVGVLYACSHCG 356
Query: 167 KLSVGM-WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSM 224
L G + + I+ + C++ + + G + A + MP++ N V W ++
Sbjct: 357 MLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLSRAGLVKRAYEYIQSMPMQPNAVIWRTL 416
Query: 225 IMGYGLHGN---GEKALELFLEMEKK 247
+ +HG+ GE A L++E K
Sbjct: 417 LGACTVHGDLSLGEIARSHLLKLEPK 442
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 240/441 (54%), Gaps = 18/441 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ G + +A+ + ++ D+VS+NS++ G V++G A +LF M R D +
Sbjct: 280 MYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYT 339
Query: 57 W----NCMIAGYVAVGDLEA--ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ NC + G + + FE + +VS N ++D + G++ A F +
Sbjct: 340 FPSVLNCCVVGSINPKSVHGLIIKTGFE---NYKLVS-NALVDMYAKTGDMDCAYTVFEK 395
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M ++V+SW S++ + + S E LK+F +M +G P++ + S+L+ACA L L
Sbjct: 396 MLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTG-VNPDQFIVASILSACAELTLLEF 454
Query: 171 GMWVH-SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
G VH FIKS ++ + L+ MY KCG +D A +F M V++V++W ++I+GY
Sbjct: 455 GKQVHLDFIKSG-LRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYA 513
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
+G G +L+ + M G +P+ TF+ +L AC+HAG+V EG YF M +VY I+P
Sbjct: 514 QNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGP 573
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHY C++DL R+G + +++L+ + VK C H + EL E A L
Sbjct: 574 EHYACMIDLFGRSGKLDEAKQLLDQMDVK-PDATVWKSLLSACRVHENLELAERAATNLF 632
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKN 409
ELEPM+ PY+MLSN Y+A +W+DV ++R +++ KG+ KE S + + + + +
Sbjct: 633 ELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDD 692
Query: 410 YSVHRKRIMYSMLSELGAHIK 430
R+ +Y+ + E+ IK
Sbjct: 693 RGHPREAEIYTKIDEIILRIK 713
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 143/294 (48%), Gaps = 45/294 (15%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N +++ K+G+ ARKLFD+MP +D ++WN MI+ YV VG L A ELF+ + +
Sbjct: 40 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 99
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
+W+ +I G + G A + F M + W +A F
Sbjct: 100 TWSSIISGYCKFGCKVEAFDLFRSM---RLEGW--------KASQF-------------- 134
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
TL SVL C+ LG + G +H F+ N + +V + T L+ MY KC + A
Sbjct: 135 -------TLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEA 187
Query: 207 RDVFD--EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+F E +N V W +M+ GY +G+G KA+E F M +G + N TF +L+AC+
Sbjct: 188 EFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACS 247
Query: 265 HA-----GMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
G + G+ +++ + V+ +VD+ A+ G +KN++ +++
Sbjct: 248 SVLARCFGEQVHGF----IVKSGFGSNVYVQ--SALVDMYAKCGDLKNAKNMLE 295
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 135/299 (45%), Gaps = 42/299 (14%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G+V+DAR LFD D S+N+MI +V G AR+LFD + W+ +I+GY
Sbjct: 50 GQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYC 109
Query: 66 AVGDLEAANELFERM-------------------PDRDVVSWNCMIDGCVRV----GNVP 102
G A +LF M ++ MI G V GNV
Sbjct: 110 KFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVF 169
Query: 103 LAL---------------EFFNR---MPARNVVSWNSMLALHVRAKSFWECLKMFDEMME 144
+ EF + +N V W +M+ + + ++ ++ F M
Sbjct: 170 VVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHA 229
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
G N+ T ++LTAC+ + G VH FI + +V + + L+ MY KCG +
Sbjct: 230 QGVEC-NQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLK 288
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
A+++ + M +VVSWNS+++G+ HG E+AL LF M + K +D TF VL+ C
Sbjct: 289 NAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC 347
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 151/335 (45%), Gaps = 28/335 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDL---VSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNW 57
MY+ VS+A LF L D V + +M+ G+ +NG+ A + F M + V
Sbjct: 177 MYAKCKCVSEAEFLF-KGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGV--- 232
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSW-------------NCMIDGCVRVGNVPLA 104
C + + L A + + R V + + ++D + G++ A
Sbjct: 233 ECNQYTFPTI--LTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNA 290
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
M +VVSWNS++ VR E L++F M + ++ T SVL C
Sbjct: 291 KNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKI-DDYTFPSVLNCCV- 348
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
+G ++ VH I + L+S L+ MY K G MD A VF++M ++V+SW S+
Sbjct: 349 VGSINPKS-VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSL 407
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW-YFDLMRRVY 283
+ GY + + E++L++F +M G P+ +LSAC ++ G + D ++
Sbjct: 408 VTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGL 467
Query: 284 NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
V Y +V + A+ G + +++ + + VK
Sbjct: 468 RWSQSV--YNSLVAMYAKCGCLDDADAIFVSMQVK 500
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 217/399 (54%), Gaps = 9/399 (2%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRD------VWNWNCMI 61
V A +F S + D+VS+ S+I G K G A + F + V+ C
Sbjct: 109 VVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSINVKPNALTLVSAISACSS 168
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
G + G A L M D ++V +N +D + G A F +M R+V+SW +
Sbjct: 169 IGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTT 228
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI-KS 180
+L + R E +++F +M+ SGEA PNE+T+V+VL+ACA +G LS+G WVH +I K
Sbjct: 229 LLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKR 288
Query: 181 NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALEL 240
++ VD + L+ MYVKCG M + VF+ + ++V+SW ++I G ++G G++ +++
Sbjct: 289 IDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNGYGKQVVQM 348
Query: 241 FLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLA 300
F M G P+D TF+ +LSAC+H G+V EG +F MR Y I P++ HYGC+VD+
Sbjct: 349 FSHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQMSHYGCMVDMYG 408
Query: 301 RAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYI 360
RA L + + +K + V+ C TH + E+ E + + I + + +G
Sbjct: 409 RASLFEEAVAFLKGMPVE-AEGPIWSALLQACKTHGNEEMSEWIRGQ-IHDKNVGVGTLA 466
Query: 361 MLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
+LSN YA+ RWDD VR ++R GL+K A S V E
Sbjct: 467 LLSNIYASSERWDDANNVRKIMRGTGLKKVAGLSWVEPE 505
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 112/209 (53%), Gaps = 6/209 (2%)
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
+V A F +P+ +VVSW S+++ + E ++ F + PN TLVS +
Sbjct: 108 DVVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSI----NVKPNALTLVSAI 163
Query: 160 TACAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
+AC+ +G + G +H++ +KS I +++ L +Y KCG AR+VF +M R+V
Sbjct: 164 SACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDV 223
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+SW +++M Y G +A+E+F +M G +PN++T V VLSAC G + G W D
Sbjct: 224 ISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHD 283
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVK 306
+ + +++ +V++ + G +K
Sbjct: 284 YIEKRIDLDVDGNIGNALVNMYVKCGDMK 312
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 50/277 (18%)
Query: 5 FGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY 64
FG+ A L + ++V YN+ +D + K G AR +F +M RDV +W ++ Y
Sbjct: 174 FGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAY 233
Query: 65 VAVGDLEAANELFERM-------PDRDVV----------------SW------------- 88
G A E+F++M P+ V W
Sbjct: 234 ARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDV 293
Query: 89 -----NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECLKMFD 140
N +++ V+ G++ + L+ FN + ++V+SW ++ LA++ K + ++MF
Sbjct: 294 DGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNGYGK---QVVQMFS 350
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK-SNNIKVDVLLSTCLLTMYVK 199
M+ G +P++ T + +L+AC+H+G +S GM ++ S I + C++ MY +
Sbjct: 351 HMLVHG-VLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQMSHYGCMVDMYGR 409
Query: 200 CGAMDLARDVFDEMPVRNVVS-WNSMIMGYGLHGNGE 235
+ A MPV W++++ HGN E
Sbjct: 410 ASLFEEAVAFLKGMPVEAEGPIWSALLQACKTHGNEE 446
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 83/188 (44%), Gaps = 9/188 (4%)
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS-FIKSNNIK 184
H K+F+ + ++M+ S + N T L AC + G+ +H+ IKS +I
Sbjct: 36 HDNVKAFFN---LCNQML-SCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHI- 90
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
D + LL Y+ + A VF +P +VVSW S+I G G +A+E F +
Sbjct: 91 FDGFIKNTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSI 150
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
KPN T V +SAC+ G + G + I+ + Y +DL A+ G
Sbjct: 151 N---VKPNALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGF 207
Query: 305 VKNSEELI 312
N+ +
Sbjct: 208 FSNARNVF 215
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/434 (31%), Positives = 231/434 (53%), Gaps = 43/434 (9%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------------ 49
Y+ G V +AR LFD D++S+ +MIDG+++ G A +++ M
Sbjct: 261 YAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMI 320
Query: 50 -----------PVRDVWN---------WNC-------MIAGYVAVGDLEAANELFERMPD 82
+ D W ++C +I Y A G ++ A FE
Sbjct: 321 VNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVK 380
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
+ SWN + G ++ G + AL+ F++M R+V SW++M++ + +++ L++F +M
Sbjct: 381 DHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKM 440
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
+ +G PNE T+VSV +A A LG L G H +++S +I + L L+ MY KCG+
Sbjct: 441 L-AGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGS 499
Query: 203 MDLARDVFDEM--PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
++ A F+++ V +V WN++I G HG+ LE+F +M++ KPN TF+ VL
Sbjct: 500 INSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVL 559
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXX 320
SAC HAG+V G F M+ YN+EP ++HYGC++D+L RAGL++ +EE+I+ + ++
Sbjct: 560 SACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPME-A 618
Query: 321 XXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRV 380
C TH + +GE A+ L L P G ++LSN YA G+W++V VR
Sbjct: 619 DIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRS 678
Query: 381 MIREKGLQKEAASS 394
+++ + + +E S
Sbjct: 679 VMQGQTMDREPGYS 692
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 172/416 (41%), Gaps = 103/416 (24%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G + +A+LLFD TLD VS N M+ G+V+NG+ ARKLFD MP + ++ M
Sbjct: 97 MYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTM 156
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNC----MIDGCVRVG----------------- 99
I G+V G A E+F+ M VV + +I C +G
Sbjct: 157 IMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFV 216
Query: 100 ------------------NVPLALEFFNRMPARNVVSWN--------------------- 120
V A F+ MP RN+V+WN
Sbjct: 217 VGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDG 276
Query: 121 ----------SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+M+ +++ E L+++ M+++G PNE +V++++AC +
Sbjct: 277 ICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHG-PNEVMIVNLVSACGRGTAIVD 335
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA--------RD-------------- 208
G +H + + T ++ Y CG MDLA +D
Sbjct: 336 GWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIK 395
Query: 209 ---------VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
FD+M VR+V SW++MI GY + + ALELF +M G KPN+ T V V
Sbjct: 396 NGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSV 455
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
SA G + EG + MR +I ++D+ A+ G + ++ + +
Sbjct: 456 FSAIATLGTLQEGKLAHEYMRS-ESIPFNDNLRAALIDMYAKCGSINSALQFFNQI 510
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 124/247 (50%), Gaps = 32/247 (12%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N +I Y GD++ A LF+ D VS N M+ G VR G + A + F+ MP + V
Sbjct: 92 NSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCV 151
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
S+ +M+ V+ F E L++F +M G VPN+ TLV+V++AC+HLG++ VH
Sbjct: 152 SYTTMIMGFVQNGFFREALEVFKDMRSCG-VVPNDLTLVNVISACSHLGEVLNCRMVHGL 210
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN--------------- 222
+ + V++ST L+ Y C + AR +FDEMP RN+V+WN
Sbjct: 211 VVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEA 270
Query: 223 ----------------SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
+MI GY G +ALE++ M + G PN+ V ++SAC
Sbjct: 271 RELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRG 330
Query: 267 GMVMEGW 273
+++GW
Sbjct: 331 TAIVDGW 337
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 72/151 (47%), Gaps = 31/151 (20%)
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG--------- 201
+E LVS L +C+ L +S G +HS I + + + L+ MY KCG
Sbjct: 52 SELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLF 111
Query: 202 ----------------------AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+D AR +FD MP + VS+ +MIMG+ +G +ALE
Sbjct: 112 DGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALE 171
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
+F +M G PND T V V+SAC+H G V+
Sbjct: 172 VFKDMRSCGVVPNDLTLVNVISACSHLGEVL 202
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 155/497 (31%), Positives = 247/497 (49%), Gaps = 58/497 (11%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ G++ DA +F+ D+V++N+M+ G+ +NG A LF +M DV
Sbjct: 159 MYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVT 218
Query: 57 WNCMIAGYVAVGDLEAANELFERM------PD---------------------------- 82
W+ +I+GY G A ++F +M P+
Sbjct: 219 WSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSV 278
Query: 83 ------------RDVVSWNCMIDGCVRVGNVPLALEFFNRM--PARNVVSWNSMLALHVR 128
D+ N +ID + ++ +A F+ + R+VV+W M+ + +
Sbjct: 279 KFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQ 338
Query: 129 AKSFWECLKMFDEMMESGEA-VPNEATLVSVLTACAHLGKLSVGMWVHSFI-KSNNIKVD 186
L++F EM + VPN+ T+ VL +CA L L+ G +H+++ + + I D
Sbjct: 339 HGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFGKQIHAYVLRRSLIYSD 398
Query: 187 VL-LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
VL ++ CL+ MY K G +D A+ VFD M RN VSW S++ GYG+HG E A +F EM
Sbjct: 399 VLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMR 458
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
K+ P+ TF+ VL AC+H+GMV G F M + + ++P VEHY C+VDLL RAG +
Sbjct: 459 KEALVPDGITFLVVLYACSHSGMVDRGINLFYRMSKDFGVDPGVEHYACMVDLLGRAGRL 518
Query: 306 KNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNT 365
+ LI +S++ C TH + EL E AK+L+EL+ + G Y +LSN
Sbjct: 519 CEATRLINDMSME-PTPVVWISLLSACRTHSNIELAEFAAKKLLELKADNDGTYTLLSNI 577
Query: 366 YAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
YA RW DV R+R +++ G++K S V ++V + + + +Y L++L
Sbjct: 578 YANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRTHSQSLKIYETLADL 637
Query: 426 GAHIKLSPAGSIEKDNF 442
IK G + + NF
Sbjct: 638 IQRIK--AIGYVPQTNF 652
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 148/282 (52%), Gaps = 17/282 (6%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
V DV+ N ++ Y G +E AN++FERM +DVV+WN M+ G + G AL F +
Sbjct: 147 VEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGK 206
Query: 111 MPAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
M +VV+W+S+++ + + E + +F +M PN TL+S+L+ACA +G
Sbjct: 207 MREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGC-RCRPNVVTLMSLLSACASVG 265
Query: 167 KLSVGMWVHSFI-------KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM--PVRN 217
L G H + + N+ D+ + L+ MY KC ++++AR +FDE+ R+
Sbjct: 266 ALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRD 325
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEK--KGPKPNDATFVCVLSACTHAGMVMEG-WW 274
VV+W MI GY HG+ AL+LF EM K PND T CVL +C + G
Sbjct: 326 VVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFGKQI 385
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
+ ++RR + C++D+ +++G V ++ + +S
Sbjct: 386 HAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS 427
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 3/179 (1%)
Query: 104 ALEFFNRMPARNV---VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
A + F+ + R + V+WNS+++++ + +F EM +P+ +V++L
Sbjct: 64 ARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILP 123
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
C +LG G VH F + + DV + L+ MY KCG M+ A VF+ M ++VV+
Sbjct: 124 VCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVT 183
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
WN+M+ GY +G E AL LF +M ++ + + T+ V+S G E F M
Sbjct: 184 WNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQM 242
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 5/180 (2%)
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
M++ P+ T V AC + +G +H + + +V + +++MY KC A
Sbjct: 1 MKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKA 60
Query: 203 MDLARDVFDEMPVRNV---VSWNSMIMGYGLHGNGEKALELFLEME-KKGPKPNDATFVC 258
+ AR VFDE+ R + V+WNS++ Y A+ LF EM G P+ V
Sbjct: 61 VVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVN 120
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+L C + G+ + G R +E V +VD+ A+ G ++++ ++ + + K
Sbjct: 121 ILPVCGYLGLGLCGRQVHGFCVRSGLVE-DVFVGNALVDMYAKCGKMEDANKVFERMRFK 179
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 219/423 (51%), Gaps = 44/423 (10%)
Query: 50 PVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWN-----CMIDGCVRVGNVPLA 104
P D + +N +I Y D ++ + LF R R V+ N ++ GC +G++ L
Sbjct: 85 PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLG 144
Query: 105 ---------------------------------LEF----FNRMPARNVVSWNSMLALHV 127
EF F+ P + V+W++M+A V
Sbjct: 145 KCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFV 204
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDV 187
R + +F EM G P+E T+VSVL+ACA LG L +G WV S+++ NI V
Sbjct: 205 RLGCSSRAVDLFREMQVMG-VCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSV 263
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
L L+ M+ KCG +D A +F +M R +VSW S+I G +HG G A+ LF EM +
Sbjct: 264 ELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVEN 323
Query: 248 GPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKN 307
G P+D F+ VLSAC+H+G+V +G +YF M R ++I PKVEHYGC+VDLL R G VK
Sbjct: 324 GITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKE 383
Query: 308 SEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYA 367
+ E ++ + + C + +LGE ++K LI+ EPM Y++LSN YA
Sbjct: 384 AFEFVQKMPFE-PNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYA 442
Query: 368 AQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGA 427
+W+ +VR M+ +G++K S+++ + + ++ + S + + +Y M+ E+G
Sbjct: 443 KLRQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGR 502
Query: 428 HIK 430
IK
Sbjct: 503 EIK 505
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 52/263 (19%)
Query: 22 DLVSYNSMIDGHVKNGETGA--ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFER 79
D+ N++I + GE G A K+FD+ P D W+ MIAG+V +G A +LF
Sbjct: 159 DVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFRE 218
Query: 80 M------PD---------------------------------RDVVSWNCMIDGCVRVGN 100
M PD + V N +ID + GN
Sbjct: 219 MQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGN 278
Query: 101 VPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
V A++ F +M +R +VSW S+ LA+H R + + +FDEM+E+G P++ +
Sbjct: 279 VDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRG---LDAVSLFDEMVENG-ITPDDVAFIG 334
Query: 158 VLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
VL+AC+H G + G + ++ N +I V C++ + + G + A + +MP
Sbjct: 335 VLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFE 394
Query: 217 -NVVSWNSMIMGYGLHGNGEKAL 238
N + W ++I H GE L
Sbjct: 395 PNQIIWRTIIT--ACHATGELKL 415
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 219/415 (52%), Gaps = 11/415 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY G A L+F+ + L+S+N+MI G V+NG + LF ++ D
Sbjct: 283 MYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGT 342
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+I G DLE L + + ++V ++D + G + A + F M
Sbjct: 343 LVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTME 402
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
RNV++W +ML + LK+F M E A N TLVS++ CAHLG L G
Sbjct: 403 KRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVA-ANSVTLVSLVHCCAHLGSLKKGR 461
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF-DEMPVRNVVSWNSMIMGYGLH 231
VH + + + + + + L+ MY KCG + A +F + +++V+ NSMIMGYG+H
Sbjct: 462 SVHGHLIRHGYEFNAVNMSALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMIMGYGMH 521
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G G +AL ++ M + KPN TFV +L+AC+H+G+V EG F M RV+NI+P +H
Sbjct: 522 GQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRTLFHCMERVHNIKPSDKH 581
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
Y C VDLL+RAG ++ + L+K + V+ C H + +G +A RLI L
Sbjct: 582 YACFVDLLSRAGYLEEAYALVKQIPVE-PSIDVLEALLGGCRIHKNINMGIQIADRLISL 640
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
+ ++ G Y+MLSN Y+ RW+ V +R ++R++GL+K A S+ + + +F
Sbjct: 641 DYLNTGIYVMLSNIYSEARRWESVNYIRGLMRKRGLKKTPAFSLTEVGNQVFTFF 695
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 156/326 (47%), Gaps = 20/326 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+YS G ++ A +FD + + N+M+ G +KN E KLF M +RD+
Sbjct: 81 IYSNLGFLNYAYKVFDQCPHRETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDIE----- 135
Query: 61 IAGYVAVGDLEAANELFE--------RMPDRDVVSWN-----CMIDGCVRVGNVPLALEF 107
+ Y V L+A L + RM R + MI+ V+ GN+ A
Sbjct: 136 LNSYTCVFGLKACTVLLDDEVGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMV 195
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+ MP R+VV WNS++ +V+ E +++F EM+ G P+ T+ S+L AC G
Sbjct: 196 FDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCG-IRPSSVTMASILKACGESGH 254
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+G VH F+ + + DV + T L+ MY G + A VF+ M R+++SWN+MI G
Sbjct: 255 KKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISG 314
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
+G ++ LF ++ + G + T V ++ C+ + G + R +E
Sbjct: 315 CVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIR-KGLES 373
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIK 313
+ IVD+ ++ G +K + ++ +
Sbjct: 374 NLVLSTAIVDMYSKCGAIKQASDVFR 399
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 218/419 (52%), Gaps = 49/419 (11%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVR------DVWNWNCMIAGYVAVGDLEAANELFER- 79
S+++ +VK G+ G AR +FDE V D+ W MI GY G +AA ELF
Sbjct: 274 TSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDK 333
Query: 80 -----MPDR--------------------------------DVVSWNCMIDGCVRVGNVP 102
+P+ D N ++D + G +P
Sbjct: 334 KWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDDTSLRNSLVDMYAKCGLIP 393
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM-MESGEAVPNEATLVSVLTA 161
A F ++VVSWNS+++ + ++ S +E L +F+ M MES +P+ T+V VL+A
Sbjct: 394 DAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMES--FLPDAVTVVGVLSA 451
Query: 162 CAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
CA +G +G+ +H F +K + + + T LL Y KCG AR VFD M +N V+
Sbjct: 452 CASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVT 511
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
W +MI G G+ G+G +L LF +M K+ PN+ F +L+AC+H+GMV EG FD M
Sbjct: 512 WAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMC 571
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSEL 340
+ N P ++HY C+VDLLARAG ++ + + I + V+ C H + +
Sbjct: 572 KELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQ-PGVGVFGAFLHGCGLHSNFDF 630
Query: 341 GEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
GE+ +R++EL P Y+++SN YA+ GRW V+ VR MI+++GL K S+V ++
Sbjct: 631 GEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEMD 689
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 122/225 (54%), Gaps = 9/225 (4%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
++D + G + A + F+ +P R+VVSW SM+ +V+ + E L +F+ M E G
Sbjct: 175 LVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMRE-GFLDG 233
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
N T+ S++TAC LG L G WVH ++ N I+++ L+T LL MYVKCG + AR VF
Sbjct: 234 NVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVF 293
Query: 211 DEMPVR------NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
DE V ++V W +MI+GY G + ALELF + + PN T +LSAC
Sbjct: 294 DEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACA 353
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSE 309
++ G L+ + Y ++ +VD+ A+ GL+ ++
Sbjct: 354 QLENIVMGKLLHVLVVK-YGLD-DTSLRNSLVDMYAKCGLIPDAH 396
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 126/286 (44%), Gaps = 47/286 (16%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP----D 82
S++D + K G+ ARK+FDE+P R V +W MI YV E LF RM D
Sbjct: 173 TSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLD 232
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA-----LHVRAKSFWECLK 137
+V + ++ C ++G + ++ + +N + NS LA ++V+ +
Sbjct: 233 GNVFTVGSLVTACTKLGCLHQG-KWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARS 291
Query: 138 MFDEMMESG------------------------------------EAVPNEATLVSVLTA 161
+FDE S +PN TL S+L+A
Sbjct: 292 VFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSA 351
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA L + +G +H + + D L L+ MY KCG + A VF ++VVSW
Sbjct: 352 CAQLENIVMGKLLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSW 410
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
NS+I GY G+ +AL+LF M + P+ T V VLSAC G
Sbjct: 411 NSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVG 456
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 15/178 (8%)
Query: 104 ALEFFNRMPA------RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
A F+R+P+ + ++ W+ + +H SF+ + + N+ + S
Sbjct: 87 ARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYN-------LARTTLGSFNDLVVFS 139
Query: 158 VLTACA-HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
+L A L + + +H I +N D + T L+ Y KCG + AR VFDE+P R
Sbjct: 140 ILLKTASQLRDIVLTTKLHCNILKSN-AADSFVLTSLVDAYSKCGKLRDARKVFDEIPDR 198
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
+VVSW SMI+ Y + E+ L LF M + N T +++ACT G + +G W
Sbjct: 199 SVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKW 256
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 207/368 (56%), Gaps = 2/368 (0%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N +I Y GD + A+ +F MP R+ +SW MI R G++ A +F+ MP RN+V
Sbjct: 418 NAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIV 477
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
+WNSML+ +V+ E LK++ M +G P+ T + + ACA L + +GM V +
Sbjct: 478 TWNSMLSTYVQNGFSEEGLKLYVSMRSNG-VQPDWITFTTSIRACADLAIVKLGMQVVTH 536
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ ++V ++ ++TMY +CG + A++ FD + ++++SWN+M+ + +G G K
Sbjct: 537 ATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKV 596
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
++ F +M K KPN ++V VLS C+H G+V EG YFD M RV+ I P EH+ C+VD
Sbjct: 597 IDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVD 656
Query: 298 LLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIG 357
LL RAGL++ +++LI+ + K C H D L E AK+L+EL+
Sbjct: 657 LLGRAGLLEQAKDLIEGMPFK-PNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSE 715
Query: 358 PYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRI 417
Y++LSN Y+ G D+V +R +++ KG++ S + +++ + V S + +
Sbjct: 716 GYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKE 775
Query: 418 MYSMLSEL 425
+Y L E+
Sbjct: 776 VYLKLEEM 783
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 136/303 (44%), Gaps = 46/303 (15%)
Query: 7 RVSDARLLFDS--SLTLDLVSYNSMIDGHVKNG--------------ETGAARKLFDEMP 50
R+SDA LFD D VS+ +MI G+ +NG +T K +D
Sbjct: 89 RMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFS 148
Query: 51 VRDVWN-----------------------------WNCMIAGYVAVGDLEAANELFERMP 81
V N ++ YV GD++ A +F +
Sbjct: 149 FTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIE 208
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+ WN MI G ++ AL+ FNRMP R+ VSWN+++++ + +CL MF E
Sbjct: 209 RPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVE 268
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M G + PN T SVL+ACA L G +H+ I +D++ L+ MY KCG
Sbjct: 269 MCNQGFS-PNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCG 327
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+DLA+ VF + + +SWNS+I G G GE AL LF +M + ++ +L
Sbjct: 328 CLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILG 387
Query: 262 ACT 264
C+
Sbjct: 388 VCS 390
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 129/312 (41%), Gaps = 66/312 (21%)
Query: 37 GETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDR--DVVSWNCMIDG 94
G T A ++F E R+++ WN MI V+ + A +LF+ MP R D VSW MI G
Sbjct: 57 GLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISG 116
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
+ G H R+ +E + G + +
Sbjct: 117 YSQNG-------------------------FHSRS---FETFSLMIRDTNDGGKNYDPFS 148
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV----- 209
SV+ AC LG + + +H+ + ++ + ++ MYVKCG +DLA V
Sbjct: 149 FTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIE 208
Query: 210 --------------------------FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
F+ MP R+ VSWN++I + HG G + L +F+E
Sbjct: 209 RPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVE 268
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE--HYGCIVDLLAR 301
M +G PN T+ VLSAC + W L R+ +E ++ ++D+ A+
Sbjct: 269 MCNQGFSPNFMTYGSVLSACASTSDLK---WGAHLHARILRMEHSLDLVFGNGLIDMYAK 325
Query: 302 AGLVKNSEELIK 313
G + ++ + K
Sbjct: 326 CGCLDLAKRVFK 337
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 151/388 (38%), Gaps = 72/388 (18%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G V A +F L +NSMI G+ + A ++F+ MP RD +WN +
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249
Query: 61 IAGY-----------------------------------VAVGDLEAANELFERM----P 81
I+ + + DL+ L R+
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEH 309
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D+V N +ID + G + LA F + + +SWNS++ V + L +F++
Sbjct: 310 SLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQ 369
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M S V +E L ++L C+ S G +H + + + + ++TMY KCG
Sbjct: 370 MRRS-SVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCG 428
Query: 202 AMDLARDVFDEMPVRNVVS-------------------------------WNSMIMGYGL 230
D A VF MP+RN +S WNSM+ Y
Sbjct: 429 DTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQ 488
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
+G E+ L+L++ M G +P+ TF + AC +V G + + + V
Sbjct: 489 NGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATK-FGLSLNVS 547
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVK 318
IV + +R GL+K ++ + K
Sbjct: 548 VANSIVTMYSRCGLIKEAKNTFDSIDDK 575
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G A L+F + +S+ +MI ++G+ G AR FD MP R++ WN M
Sbjct: 423 MYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSM 482
Query: 61 IAGYVAVGDLEAANELFERMPDRDV----VSWNCMIDGCVRVGNVPLALEF--------- 107
++ YV G E +L+ M V +++ I C + V L ++
Sbjct: 483 LSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGL 542
Query: 108 --------------------------FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
F+ + ++++SWN+MLA + + + F++
Sbjct: 543 SLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFED 602
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVG-MWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
M+++ E PN + VSVL+ C+H+G ++ G + S + I +C++ + +
Sbjct: 603 MLKT-ECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRA 661
Query: 201 GAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGPK 250
G ++ A+D+ + MP + N W++++ +H + E A + +E++ +G +
Sbjct: 662 GLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSE 715
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 227/405 (56%), Gaps = 14/405 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY FG +S A LF S + +N MI G+ + G+ +LF EM + + +
Sbjct: 360 MYCKFGMLSFAERLFQRSQG-SIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVG 418
Query: 61 IAGYVA-VGDLEAAN-------ELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
I +A G L N + + D + N +I+ + + ++ FNR
Sbjct: 419 IVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-S 477
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+V+ WN++++ H+ K + E + +FD M+ + PN ATLV VL+AC+HL L G
Sbjct: 478 ERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQN-PNTATLVVVLSACSHLAFLEKGE 536
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H +I K+++ L T L+ MY KCG ++ +R+VFD M ++V+ WN+MI GYG++G
Sbjct: 537 RLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNG 596
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
E A+E+F ME+ KPN+ TF+ +LSAC HAG+V EG F M+ Y+++P ++HY
Sbjct: 597 YAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQS-YSVKPNLKHY 655
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VDLL R+ ++ +EEL+ + + C TH E+G + K I+ E
Sbjct: 656 TCMVDLLGRSCNLEEAEELVLSMPIP-PDGGVWGALLSACKTHNQIEMGIRIGKNAIDSE 714
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREK-GLQKEAASSVV 396
P + G YIM++N Y++ GRWD+ E VR ++++ + K+A S+V
Sbjct: 715 PENDGYYIMVANMYSSIGRWDEAENVRRTMKDRCSMGKKAGWSMV 759
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 37/295 (12%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM-PVRD---VWN 56
+YS ++DA +FD D+V++ +++ G+V+NGE+ + EM V D N
Sbjct: 155 LYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPN 214
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVG----------------- 99
+ G++A G+L D+VS C+ V+ G
Sbjct: 215 ARTLEGGFLACGNLG------------DLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCK 262
Query: 100 -NVPL-ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
VP A + F+ + ++++SW SM+ ++ R +C++ F EM+E+ + P+ +
Sbjct: 263 CGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLEN-QVCPDGMVIGC 321
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
+L+ + + G H I + D ++ LL+MY K G + A +F + +
Sbjct: 322 ILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLF-QRSQGS 380
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ WN MI+GYG G K ++LF EM+ G + V +++C G + G
Sbjct: 381 IEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLG 435
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 5/170 (2%)
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+ +P ++ WNS L + ++S + F +M S +PN T V ++ AH
Sbjct: 66 LFHSLPFKDTFLWNSFLKT-LFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFM 124
Query: 167 KLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
+ GM +H+ K + + + +++Y +C M+ A VFDE+PVR+VV+W +++
Sbjct: 125 MIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALV 184
Query: 226 MGYGLHGNGEKALELFLEMEKKG---PKPNDATFVCVLSACTHAGMVMEG 272
+GY +G E LE EM + G KPN T AC + G ++ G
Sbjct: 185 IGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSG 234
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 5/213 (2%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGE--AVPNEATLVSVLTA 161
A++ F+ +P R+VV+W +++ +V+ L+ EM G+ PN TL A
Sbjct: 165 AVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLA 224
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
C +LG L G +H + N I + + + +L+MY KCG A F E+ ++++SW
Sbjct: 225 CGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSW 284
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL-MR 280
SMI Y G + F EM + P+ C+LS ++ V G + L +R
Sbjct: 285 TSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIR 344
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
R Y + V++ ++ + + G++ +E L +
Sbjct: 345 RHYAPDEMVDN--SLLSMYCKFGMLSFAERLFQ 375
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 217/401 (54%), Gaps = 10/401 (2%)
Query: 2 YSVFGRVSDARLLFD----SSLTLDLVSYNSMIDGHVKNGETGAARKL----FDEMPVRD 53
+S R DA LF S++ + ++ ++++ + G+ G +++ +
Sbjct: 135 FSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVGKQIHGCAIKTSLCSN 194
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
V+ + ++ YV + +E A + FE +VVS+ +I G ++ G AL FN MP
Sbjct: 195 VFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGRFEDALRVFNEMPE 254
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
RNV+SWN+M+ + E +K F +M+ G +PNE+T ++A +++ L G
Sbjct: 255 RNVISWNAMVGGCSKIGHNEEAVKFFIDMLREG-FIPNESTFPCAISAASNIASLGFGRS 313
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
H+ K++ + L++ Y KCG+M + +FD++ RNVVSWN++I GY +G
Sbjct: 314 FHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVICGYAHNGR 373
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
G +A+ LF M +G KPN + + +L AC HAG+V EG+ YF+ R K EHY
Sbjct: 374 GAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARIESPNLLKPEHYA 433
Query: 294 CIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEP 353
C+VDLLAR+G ++ I+ + C H + ELGE+ AK ++ L+P
Sbjct: 434 CMVDLLARSGRFTEAQNFIRRMPFN-PGIGFWKAILGGCQIHHNIELGELAAKNILALDP 492
Query: 354 MDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
D+ Y+M+SN ++A GRW DV R+R I+EKG+++ SS
Sbjct: 493 DDVSSYVMMSNAHSAAGRWSDVARLRTEIQEKGMKRIPGSS 533
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 139/315 (44%), Gaps = 57/315 (18%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y + +A+ F+ + ++VSY ++I G++K+G A ++F+EMP R+V +WN M
Sbjct: 204 LYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGRFEDALRVFNEMPERNVISWNAM 263
Query: 61 IAGYVAVGDLEAANELFERM------PDRDVVSW-------------------------- 88
+ G +G E A + F M P+
Sbjct: 264 VGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIASLGFGRSFHACAIKFLG 323
Query: 89 -------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
N +I + G++ +L F+++ RNVVSWN+++ + E + +F+
Sbjct: 324 KLNDFVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVICGYAHNGRGAEAISLFER 383
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLS----TCLLTMY 197
M G PN+ +L+ +L AC H G + G + I+ LL C++ +
Sbjct: 384 MCSEG-IKPNKVSLLGLLLACNHAGLVDEGFL---YFNKARIESPNLLKPEHYACMVDLL 439
Query: 198 VKCGAMDLARDVFDEMPVRNVVS-WNSMIMGYGLHGN---GEKALELFLEMEKKGPKPND 253
+ G A++ MP + W +++ G +H N GE A + L ++ P+D
Sbjct: 440 ARSGRFTEAQNFIRRMPFNPGIGFWKAILGGCQIHHNIELGELAAKNILALD-----PDD 494
Query: 254 -ATFVCVLSACTHAG 267
+++V + +A + AG
Sbjct: 495 VSSYVMMSNAHSAAG 509
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 223/424 (52%), Gaps = 20/424 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDV 54
MY G ++ A +F+ SL D+V + +MI G V+N A +FD+M P +
Sbjct: 312 MYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTET 371
Query: 55 WNWNCMIAGYVAVGDLEAAN-------ELFERMPDRDVVSWNCMIDGCVRVGNVPLALEF 107
M + A L A N + + D + N ++ + G++ +
Sbjct: 372 -----MASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIV 426
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+RM R++VSWN+++A + + ++ +F+EM S P+ T+VS++ CA G+
Sbjct: 427 FDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEM-RSCHQTPDSITIVSLVQGCASTGQ 485
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L G W+H F+ N ++ +L+ T L+ MY KCG +D A+ F+ MP +++VSW+++I G
Sbjct: 486 LHPGKWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAG 545
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
YG HG GE AL L+ + + KPN F+ +LS+C+H G++ +G ++ M R + P
Sbjct: 546 YGYHGKGETALRLYSKFLETRIKPNHVIFLSILSSCSHNGLIDQGLNIYESMTRDFGFVP 605
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
+EH+ C+VDLL RAG V+ + L K + C + + ELG+I+A
Sbjct: 606 NLEHHACMVDLLCRAGKVEEAYNLYKRM-FSDPVLDVLGIILDACRANGNKELGDIIAND 664
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFV 407
+I+L PM G Y+ L++ YA+ +W+ V V +R GL+K S + + + +F
Sbjct: 665 IIKLRPMSAGNYVQLAHCYASINKWEGVGEVWTHMRSLGLRKIPGWSFIDIHGTITTFFT 724
Query: 408 KNYS 411
+ S
Sbjct: 725 DHNS 728
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 129/287 (44%), Gaps = 37/287 (12%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
+ L+ D +S+I+ +VK G ARK+FD MP R+V W +I Y +GD+ A L
Sbjct: 98 NGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSL 157
Query: 77 FERM------PDR------------------------------DVVSWNCMIDGCVRVGN 100
F +M P D+ N M++ + G+
Sbjct: 158 FRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIFYGFMSDLNLLNSMVNLYGKCGS 217
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
+ + F M R+VVSWNS+L+ + + E L + M G P SVL+
Sbjct: 218 IEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLE-PGLQAFGSVLS 276
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
G + +G VH I +D + T + MY+K G +++A +F+ ++VV
Sbjct: 277 VAVSTGDMRLGRLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVL 336
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
W +MI G + N +KAL +F +M K G KP+ T V++AC G
Sbjct: 337 WTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACAQLG 383
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA-TLVSVLTACAHLGKLSVGMWVHS 176
S+N+++ H + + L + M+ + +P++A T S+L AC+ L +G +H
Sbjct: 36 SYNALINRHSTQGAHRQVLITYTSMLNAN--IPSDAYTFPSLLKACSFLNLFHLGNSLHQ 93
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
+ N + D +++ L+ YVK G D+AR VFD MP RNVV W ++I Y G+ +
Sbjct: 94 RVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVRE 153
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMV--MEGWWYFDLMRRVYNIEPKVEHYGC 294
A LF +M +G +P+ T + +L + V + G F Y +
Sbjct: 154 AFSLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIF------YGFMSDLNLLNS 207
Query: 295 IVDLLARAGLVKNSEELIKYV 315
+V+L + G +++ +L +++
Sbjct: 208 MVNLYGKCGSIEDCRKLFEFM 228
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 245/497 (49%), Gaps = 58/497 (11%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ G++ DA +++ D+V++N+M+ G+ +NG A LF +M DV
Sbjct: 51 MYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVT 110
Query: 57 WNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVG------------- 99
W+ +I+GY G A ++F +M +VV+ ++ GC VG
Sbjct: 111 WSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSI 170
Query: 100 -----------------------------NVPLALEFFNRM--PARNVVSWNSMLALHVR 128
++ +A F+ + R+VV+W M+ + +
Sbjct: 171 KFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQ 230
Query: 129 AKSFWECLKMFDEMMESGEA-VPNEATLVSVLTACAHLGKLSVGMWVHSFI-KSNNIKVD 186
L++F EM + VPN+ T+ VL ACA L L G +H+++ + + I D
Sbjct: 231 YGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSD 290
Query: 187 VL-LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
VL ++ CL+ MY K G +D A+ VFD M RN +SW S++ GYG+HG E A +F EM
Sbjct: 291 VLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMR 350
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
K+ + TF+ VL AC+H+GMV G F M + + ++P VEHY C+ DL RAG +
Sbjct: 351 KEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRL 410
Query: 306 KNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNT 365
+ LI +S++ C TH + EL E AK+L+EL+ + G Y +LSN
Sbjct: 411 CEATRLINDMSME-PTPVVWIALLSACRTHSNVELAEFAAKKLLELKADNDGTYTLLSNI 469
Query: 366 YAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
YA RW DV R+R +++ G++K S V ++V + + + + +Y L++L
Sbjct: 470 YANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRTHSQSQKIYETLADL 529
Query: 426 GAHIKLSPAGSIEKDNF 442
IK G + + NF
Sbjct: 530 IQRIK--AIGYVPQTNF 544
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 146/286 (51%), Gaps = 17/286 (5%)
Query: 49 MPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
+PV + N ++ Y G +E A++++ERM +DVV+WN M+ G + G AL F
Sbjct: 37 LPVSGFFVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLF 96
Query: 109 NRMPAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
+M +VV+W+S+++ + + E + +F +M PN TL+S+L+ CA
Sbjct: 97 GKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGC-SCRPNVVTLMSLLSGCAS 155
Query: 165 LGKLSVGMWVHSFI-------KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM--PV 215
+G L G H + + N+ D+ L+ MY KC ++++AR +FDE+
Sbjct: 156 VGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKD 215
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEK--KGPKPNDATFVCVLSACTHAGMVMEGW 273
R+VV+W MI GY +G+ AL+LF EM K PND T CVL AC + G
Sbjct: 216 RDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGK 275
Query: 274 WYFDLMRRVYNIEPKVEHYG-CIVDLLARAGLVKNSEELIKYVSVK 318
+ R I+ V C++D+ +++G V ++ + +S +
Sbjct: 276 QIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKR 321
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 200/348 (57%), Gaps = 1/348 (0%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
DV+ N +I+ + G + A + FN M ++V SW++++ H + + ECL + +M
Sbjct: 6 DVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMS 65
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
G E+TLV+VL+AC HLG +G +H + N +++V++ T L+ MYVK G +
Sbjct: 66 SEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCL 125
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ VF M +N S+ MI G +HG G++AL++F EM ++G P+D +V V SAC
Sbjct: 126 EKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSAC 185
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXX 323
+HAG+V EG F M+ + IEP V+HYGC+VDLL R G++K + ELIK +S+K
Sbjct: 186 SHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIK-PNDV 244
Query: 324 XXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIR 383
C H + E+G+I A+ L L + G Y++L+N YA +WDDV ++R +
Sbjct: 245 IWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLA 304
Query: 384 EKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKL 431
E+ L + S++ + K+ ++ S+ + I+Y M+ ++ +K
Sbjct: 305 ERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKF 352
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 215/416 (51%), Gaps = 14/416 (3%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYVAVGDLEAANELF 77
D +Y+ ++ V+ G +L + + DV+ +I Y G +E A +F
Sbjct: 113 DGFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVF 172
Query: 78 ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
+ M R VVSWN ++ G V+ G+ A F +P RNVVSW +M+A + + E L
Sbjct: 173 DDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALS 232
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
+F +M + ++ LV+VL+ACA LG L +G W+H +++ + V L+ L+ MY
Sbjct: 233 LFGQMRRA-RVELDQVVLVAVLSACAELGDLKLGRWIHWYVQERQRQASVRLNNALMHMY 291
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM-----EKKGPKPN 252
CG +D A +F +M + VSW +IM + G G++AL+LF +M K G +P+
Sbjct: 292 ASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEALDLFKDMLSDGVGKSGIRPD 351
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
TF+ L AC+HAG V EG F+ M + I ++EHYGC+VDLL+RAG + + LI
Sbjct: 352 GTTFIAALCACSHAGFVEEGCRIFESMIHTWRISLQIEHYGCMVDLLSRAGCLDEAYRLI 411
Query: 313 KYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI-ELEPMD--IGPYIMLSNTYAAQ 369
+ + K C H +SEL VA L+ EL+ D G ++LSN YA
Sbjct: 412 ETMPFK-PNDAIWGALLGGCRIHKNSELASRVANTLVAELDSTDQAAGYLVLLSNIYAFA 470
Query: 370 GRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
GRW DV VR + E G++K S + + + V + + ++Y L E+
Sbjct: 471 GRWQDVIAVRQKMIEMGVKKPPGQSWIQIYGVVHNFVVGDMTHKHSSLIYETLCEI 526
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 124/282 (43%), Gaps = 45/282 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
Y+ G V AR +FD +VS+NS++ G+VK G+ AAR +F+E+PVR+V +W M
Sbjct: 158 FYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTM 217
Query: 61 IAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPL------------- 103
IAGY G A LF +M + D V ++ C +G++ L
Sbjct: 218 IAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACAELGDLKLGRWIHWYVQERQR 277
Query: 104 ----------------------ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
A F +M + VSW ++ + E L +F +
Sbjct: 278 QASVRLNNALMHMYASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEALDLFKD 337
Query: 142 MMESGEAV----PNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLTM 196
M+ G P+ T ++ L AC+H G + G + S I + I + + C++ +
Sbjct: 338 MLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESMIHTWRISLQIEHYGCMVDL 397
Query: 197 YVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKA 237
+ G +D A + + MP + N W +++ G +H N E A
Sbjct: 398 LSRAGCLDEAYRLIETMPFKPNDAIWGALLGGCRIHKNSELA 439
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
G + A + F ++ WN M+ + + + W+ ++ +++M+ + P+ T +
Sbjct: 62 GKLQHAHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNA-CEPDGFTYSFL 120
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L+AC G + G +H + + DV ++T L+ Y CG ++ AR VFD+M R+V
Sbjct: 121 LSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRSV 180
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL 278
VSWNS+++GY G+ + A +F E+ P N ++ +++ G +E F
Sbjct: 181 VSWNSLLVGYVKCGDFDAARNVFEEI----PVRNVVSWTTMIAGYAQNGKCVEALSLFGQ 236
Query: 279 MRR 281
MRR
Sbjct: 237 MRR 239
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 231/422 (54%), Gaps = 20/422 (4%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDG--HVKN-GETGAARKLF-------DEMPVRDVW 55
G ++ ARLL +++ +L+ YN++I H N A LF +P D +
Sbjct: 38 GDLNYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTF 97
Query: 56 NWNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRM 111
++ + + + A +L + D+ N +I +G + +A + F+RM
Sbjct: 98 TYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRM 157
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
R+VVSW SM+A V E +++F M+E G V NEAT++SVL CA G LSVG
Sbjct: 158 SHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDV-NEATVISVLRGCADSGALSVG 216
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
VH +K I + T L+ MY KCG ++ AR+VFD++ R+V W +MI G H
Sbjct: 217 RKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACH 276
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G ++A+ELFLEME KP++ T + VLSA +AG+V EG+ +F+ +++ Y+++P ++H
Sbjct: 277 GMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKH 336
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
+GC+VDLLA+ G ++ +E+ I + +K C H D+E E + K L EL
Sbjct: 337 FGCMVDLLAKGGCLEEAEDFINAMPMK-PDAVIWRTLIWACKVHADTERAERLMKHL-EL 394
Query: 352 EPM---DIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVK 408
+ M D G YI+ SN YA+ G+W D VR ++ +KGL K SS + ++ ++ +
Sbjct: 395 QGMSAHDSGSYILASNVYASTGKWCDKAEVRELMNKKGLVKPPGSSRIEVDGVVHEFVMG 454
Query: 409 NY 410
+Y
Sbjct: 455 DY 456
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLF----------DEMP 50
MYS G + AR +FD D+VS+ SMI G V + T A +LF +E
Sbjct: 140 MYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEAT 199
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
V V C +G ++VG + + E+ D +I + G + A E F+
Sbjct: 200 VISVLR-GCADSGALSVGR-KVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDD 257
Query: 111 MPARNVVSWNSM---LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
+ R+V W +M LA H K E +++F E ME+ P+E T++ VL+A + G
Sbjct: 258 VLDRDVFVWTAMIYGLACHGMCK---EAIELFLE-METCNVKPDERTIMVVLSAYRNAGL 313
Query: 168 LSVG-MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMI 225
+ G M+ + K ++K ++ C++ + K G ++ A D + MP++ + V W ++I
Sbjct: 314 VREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLI 373
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDA 254
+H + E+A L +E +G +D+
Sbjct: 374 WACKVHADTERAERLMKHLELQGMSAHDS 402
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/436 (32%), Positives = 236/436 (54%), Gaps = 13/436 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ G + DA F+ S + +++++M+ G+ + G++ A KLF++M V
Sbjct: 263 MYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFT 322
Query: 61 IAGYV-AVGDLEAANE-------LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ G + A DL A E F+ + + ++D + G++ A + F +
Sbjct: 323 LVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQ 382
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+VV W S++ +V+ + L ++ +M + +PNE T+ SVL AC+ L L G
Sbjct: 383 QPDVVLWTSIITGYVQNGDYEGGLNLYGKM-QMERVIPNELTMASVLRACSSLAALDQGK 441
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H+ I K++V + + L MY KCG++D +F MP R+V+SWN+MI G +G
Sbjct: 442 QMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNG 501
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
+G KALELF +M +G KP+ TFV +LSAC+H G+V GW YF +M +NI P VEHY
Sbjct: 502 HGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHY 561
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VD+L+RAG + ++E I+ +V C H + ELG ++L+EL
Sbjct: 562 ACMVDILSRAGKLNEAKEFIESATVD-HGLCLWRILLGACKNHRNYELGVYAGEKLVELG 620
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFV---KN 409
+ Y++LS+ Y A G ++VERVR +++ +G+ KE S + L+ + V ++
Sbjct: 621 SPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQH 680
Query: 410 YSVHRKRIMYSMLSEL 425
V R+ +L++L
Sbjct: 681 PQVDEIRLELELLTKL 696
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 146/290 (50%), Gaps = 23/290 (7%)
Query: 1 MYSVFGRVSDARLLFDS--SLTLDLVSYNSMIDGHVKNGETGA---ARKLFDEMPVRDVW 55
+Y+ +S A LFDS D VS+NS+I+ +N + + A LF M +
Sbjct: 55 LYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRAN-- 112
Query: 56 NWNCMIAGYVAVGDLEAANELFERMPDR-------------DVVSWNCMIDGCVRVGNVP 102
N + + G AA+ L + + + DV + +++ + G V
Sbjct: 113 --NVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVF 170
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
A + F+RMP RN VSW +M++ + + + +++F E+M E + NE L SVL+A
Sbjct: 171 DARKLFDRMPERNTVSWATMISGYASSDIADKAVEVF-ELMRREEEIQNEFALTSVLSAL 229
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
+ G VHS N + V ++ L+TMY KCG++D A F+ +N ++W+
Sbjct: 230 TSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWS 289
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+M+ GY G+ +KAL+LF +M G P++ T V V++AC+ V+EG
Sbjct: 290 AMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEG 339
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 222/402 (55%), Gaps = 11/402 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MYS G ++ A +F +VS+ S I +V+ G A LFDEM + D++
Sbjct: 615 MYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 674
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVS----WNCMIDGCVRVGNVPLALEFFNRMP 112
++ L+ ++ + + S N +I+ + G+V A F+++P
Sbjct: 675 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 734
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+++VSWN+M+ + + E L++F +M + + P++ T+ VL ACA L L G
Sbjct: 735 VKDIVSWNTMIGGYSQNSLPNEALELFLDMQK--QFKPDDITMACVLPACAGLAALDKGR 792
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H I D+ ++ L+ MY KCG + LA+ +FD +P ++++SW MI GYG+HG
Sbjct: 793 EIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHG 852
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G +A+ F EM G +P++++F +L+AC+H+G++ EGW +F+ MR +EPK+EHY
Sbjct: 853 FGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 912
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VDLLAR G + + + I+ + +K C H D +L E VA+ + ELE
Sbjct: 913 ACVVDLLARMGNLSKAYKFIESMPIK-PDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELE 971
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
P + Y++L+N YA +W++V+++R ++++G ++ S
Sbjct: 972 PDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCS 1013
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 136/300 (45%), Gaps = 42/300 (14%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
++ + +++D ++ +V G+ RK+FD++ V+ WN +++ Y +G+
Sbjct: 394 VIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRE 453
Query: 73 ANELFERMPDRDVVSWNCMIDGCV------------------------------------ 96
+ LF++M VV NC CV
Sbjct: 454 SVSLFKKMQKLGVVG-NCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLI 512
Query: 97 ----RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
+ G V A F+ + +VVSWNSM+ V L++F +M+ G V +
Sbjct: 513 AAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEV-DL 571
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
TLVSVL A A++G LS+G +H F +V+ S LL MY KCG ++ A +VF +
Sbjct: 572 TTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVK 631
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
M +VSW S I Y G A+ LF EM+ KG +P+ T ++ AC + + +G
Sbjct: 632 MGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG 691
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 58/115 (50%)
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
SVL CA L G VHS I SN I +D L L+ MYV CG + R +FD++
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
V WN ++ Y GN +++ LF +M+K G N TF CVL G V E
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE 488
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 241/467 (51%), Gaps = 51/467 (10%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+F S + D N +++ + K GE A KLFD MP R+ + N MI Y+ +G++E
Sbjct: 103 LIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIEN 162
Query: 73 ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM--------------------- 111
A LF+ M +R+V +WN M+ G V+ G AL F+RM
Sbjct: 163 AKNLFDEMTERNVATWNAMVTGLVKFGLNEEAL-LFSRMNVLGFVPDEYSFGSVLRGCAH 221
Query: 112 -------------------------PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
P N+V+WN+++A + + F L + MM+
Sbjct: 222 LRALSVGDRFTLMLRNVGERIIKWMPNCNLVAWNTLMAGKAQNRCFDGVLDHYC-MMKMA 280
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
P+ T VSV+++C+ L L G +H+ IK+ V ++S+ L++MY KCG++
Sbjct: 281 GYRPDRITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVTVISS-LVSMYSKCGSLQD 339
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
+ F E R+VV W+SMI YG HG EKA++LF + EK+ N+ TF+ +L AC+H
Sbjct: 340 SIKAFLECEERDVVLWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSH 399
Query: 266 AGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXX 325
+G+ +G +FD+M Y ++ ++EHY C+VDLL R+G ++ +E +I+ + V
Sbjct: 400 SGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAETIIRSMPVS-ADAIIW 458
Query: 326 XXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREK 385
C H + E+ VA+ ++ ++P D Y++++ +A+ RW +V VR +++K
Sbjct: 459 KTLLSACKIHKNEEMARRVAEEVLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKDK 518
Query: 386 GLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLS 432
++KE S V +++ ++ + + S + + L EL + +K+
Sbjct: 519 MVKKEPGVSWVEVKNQVHQFHMGDESHSKFVEINQYLEELTSEMKMQ 565
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 111/270 (41%), Gaps = 54/270 (20%)
Query: 32 GHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCM 91
GH+K ++ E + + +C+ V++G + + +F D N +
Sbjct: 61 GHIKKAFESFLYGIWTEPRLFSILIQSCIPTNSVSLGK-QLHSLIFTSGYSSDKFISNHL 119
Query: 92 IDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA--- 148
++ + G + A++ F+RMP RN +S N M+ ++ + +FDEM E A
Sbjct: 120 LNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWN 179
Query: 149 --------------------------VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
VP+E + SVL CAHL LSVG
Sbjct: 180 AMVTGLVKFGLNEEALLFSRMNVLGFVPDEYSFGSVLRGCAHLRALSVGD---------- 229
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
T+ ++ ++ + MP N+V+WN+++ G + + L+ +
Sbjct: 230 ----------RFTLMLR----NVGERIIKWMPNCNLVAWNTLMAGKAQNRCFDGVLDHYC 275
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
M+ G +P+ TFV V+S+C+ + +G
Sbjct: 276 MMKMAGYRPDRITFVSVISSCSELATLCQG 305
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 223/402 (55%), Gaps = 11/402 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MYS G ++ A +F +VS+ S+I +V+ G A LFDEM + D++
Sbjct: 340 MYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYT 399
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVS----WNCMIDGCVRVGNVPLALEFFNRMP 112
++ L+ ++ + + S N +I+ + G+V A F+++P
Sbjct: 400 VTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIP 459
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+++VSWN+M+ + + E L++F +M + + P++ T+ VL ACA L L G
Sbjct: 460 VKDIVSWNTMIGGYSQNLLPNEALELFLDMQK--QFKPDDITMACVLPACAGLAALDKGR 517
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H I D+ ++ L+ MY KCG + LA+ +FD +P ++++SW MI GYG+HG
Sbjct: 518 EIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHG 577
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G +A+ F EM G +P++++F +L+AC+H+G++ EGW +F+ MR +EPK+EHY
Sbjct: 578 FGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 637
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VDLLAR G + + + I+ + +K C H D +L E VA+ + ELE
Sbjct: 638 ACVVDLLARMGNLSKAYKFIESMPIK-PDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELE 696
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
P + Y++L+N YA +W++V+++R ++++G ++ S
Sbjct: 697 PDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCS 738
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 129/280 (46%), Gaps = 42/280 (15%)
Query: 33 HVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMI 92
+V G+ RK+FD++ V+ WN +++ Y +G+ + LF++M VV NC
Sbjct: 139 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG-NCYT 197
Query: 93 DGCV----------------------------------------RVGNVPLALEFFNRMP 112
CV + G V A F+ +
Sbjct: 198 FTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELS 257
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+VVSWNSM+ V L++F +M+ G V + TLVSVL ACA++G LS+G
Sbjct: 258 EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEV-DLTTLVSVLVACANIGNLSLGR 316
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H F +V+ S LL MY KCG ++ A +VF +M +VSW S+I Y G
Sbjct: 317 ALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREG 376
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
A+ LF EM+ KG +P+ T ++ AC + + +G
Sbjct: 377 LYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG 416
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 58/115 (50%)
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
SVL CA L G VHS I SN I VD L L+ MYV CG + R +FD++
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
V WN ++ Y GN +++ LF +M+K G N TF CVL G V E
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE 213
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 231/438 (52%), Gaps = 11/438 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWN 56
MY+ FG + A++ F D+VS+N++I NG+ A F +M D
Sbjct: 312 MYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSIT 371
Query: 57 WNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ ++ + L ++ + D+++ N ++ + ++ AL F +
Sbjct: 372 YISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDIS 431
Query: 113 AR-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
N+VSWN++L+ ++ K E +++ EM SG P+ T+ ++L CA L L VG
Sbjct: 432 RNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNK-PDSITITTLLGTCAELTSLGVG 490
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
VH + + + +DV + L+ MY KCG++ ARDVFD ++VSW+S+I+GY
Sbjct: 491 NQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQC 550
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G G +AL LF M G +PN+ T++ LSAC+H G+V EGW + M + I P EH
Sbjct: 551 GLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREH 610
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
+ CIVDLLARAG + +E I+ + C TH + ++ E A +++L
Sbjct: 611 FSCIVDLLARAGCLHEAETFIQKSGLD-ADITAWKTLLAACKTHNNVDIAERGAGNILKL 669
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
+P + +ML N +A+ G W++V ++R ++++ G+QK S + ++D +F ++ S
Sbjct: 670 DPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSS 729
Query: 412 VHRKRIMYSMLSELGAHI 429
++ ++Y+ML EL + +
Sbjct: 730 HPQRNLIYTMLEELWSQV 747
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 132/271 (48%), Gaps = 8/271 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWN 56
MY G + DAR +FD+ ++VS+ SMI G+ +NG+ A ++ +M D
Sbjct: 109 MYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLT 168
Query: 57 WNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ +I GD++ +L + + S N +I G + A F R+P
Sbjct: 169 FGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIP 228
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++++SW +M+ +++ E L +F +++ G PNE SV +AC+ L +L G
Sbjct: 229 TKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGK 288
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
VH ++ +V L MY K G + A+ F ++ ++VSWN++I + +G
Sbjct: 289 QVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNG 348
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ +A++ F +M G P+ T++ +L C
Sbjct: 349 DANEAIDFFRQMIHIGLTPDSITYISLLCTC 379
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 11/273 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ FG++ A +F T DL+S+ +MI G+++ G A LF ++ + + N
Sbjct: 210 MYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEF 269
Query: 61 IAGYV-----AVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
I G V ++ +LE ++ R+V + + D + G +P A F ++
Sbjct: 270 IFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQI 329
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
++VSWN+++A E + F +M+ G P+ T +S+L C +L+ G
Sbjct: 330 KNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIG-LTPDSITYISLLCTCGSPVRLNQG 388
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGL 230
+HS+I ++ + LLTMY KC + A +VF ++ N+VSWN+++
Sbjct: 389 RQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQ 448
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ L+ EM G KP+ T +L C
Sbjct: 449 KKQEGETFRLYKEMHFSGNKPDSITITTLLGTC 481
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%)
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
NS + + + E L+ FD +++ + +T S++ ACA+ L +H +
Sbjct: 33 NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVL 92
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+N + ++L ++ MY KCG+M AR VFD M + NVVSW SMI GY +G A+
Sbjct: 93 KSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAII 152
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAG 267
++++M + G P+ TF V+ AC AG
Sbjct: 153 MYIQMTRSGQFPDQLTFGSVIKACYIAG 180
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 100/181 (55%), Gaps = 2/181 (1%)
Query: 85 VVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME 144
++ N MI+ + G++ A + F+ M NVVSW SM++ + + + + M+ +M
Sbjct: 100 IILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTR 159
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
SG+ P++ T SV+ AC G + +G +H+ + + + L++MY G ++
Sbjct: 160 SGQ-FPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIE 218
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLSAC 263
A +VF +P ++++SW +MI GY G +AL LF ++ ++G +PN+ F V SAC
Sbjct: 219 HASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSAC 278
Query: 264 T 264
+
Sbjct: 279 S 279
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 196/341 (57%), Gaps = 5/341 (1%)
Query: 76 LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWEC 135
+F+ D ++ N +I+ G++ +A++ F+ M R++VSW+++++ V+ E
Sbjct: 103 IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEA 162
Query: 136 LKMFDEMMESGEAVPN---EATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
L +F +M + N A ++SV++A + LG + +G+WVHSFI I + V L T
Sbjct: 163 LSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTA 222
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
L+ MY +CG +D + VFDEMP RNVV+W ++I G +HG +AL++F EM++ G KP+
Sbjct: 223 LINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPD 282
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
A F+ VL AC+H G+V +GW F+ MR + I+P +EHYGC+VDLL RAGL+ + + +
Sbjct: 283 GALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFV 342
Query: 313 KYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRW 372
+ + +K C H L E +R+IEL+P G Y++LSN Y G W
Sbjct: 343 EEMPLK-PNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNW 401
Query: 373 DDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVH 413
+R +++ + KE S VH++ + FV VH
Sbjct: 402 GGKAGLRNSMKQNRIVKEPGLSFVHIDQVVHE-FVSGDHVH 441
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 28/286 (9%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV--RDVWNW-- 57
Y G + A LFD D+VS++++I VKN A +F +M + RD+ NW
Sbjct: 122 YGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMGHRDIRNWLD 181
Query: 58 ----NCMIAGYVAVGDLEAA---NELFERMPDRDVVSW-NCMIDGCVRVGNVPLALEFFN 109
+I+ ++G +E + RM V +I+ R G + +++ F+
Sbjct: 182 RAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFD 241
Query: 110 RMPARNVVSWNSM---LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
MP RNVV+W ++ LA+H R++ E LK+F EM ESG P+ A + VL AC+H G
Sbjct: 242 EMPERNVVTWTALINGLAVHGRSR---EALKVFYEMKESGLK-PDGALFIGVLVACSHGG 297
Query: 167 KLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSM 224
+ G V ++ IK + C++ + + G + A D +EMP++ N V W ++
Sbjct: 298 LVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLKPNSVIWRTL 357
Query: 225 I---MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
+ + + G EKA E +E++ +D +V + +A G
Sbjct: 358 LGACVNHNHLGLAEKARERIIELDPY----HDGDYVLLSNAYGRVG 399
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 203/402 (50%), Gaps = 43/402 (10%)
Query: 35 KNGETG--AARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-------PDR-- 83
K GE+G +K+FD MPVRDV +WN +IAG+ G A ++ M PD
Sbjct: 170 KRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFT 229
Query: 84 -------------------------------DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
DV + +ID + + +L F +P
Sbjct: 230 LSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP 289
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++ +SWNS++A V+ F L F M++ P + SV+ ACAHL LS+G
Sbjct: 290 RKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKE-NVKPMAVSFSSVIPACAHLTALSLGR 348
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H I + +++ L+ MY KCG + +AR VFD + R++V+W ++IMG +HG
Sbjct: 349 QLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHG 408
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
+ A+ LF M + G +P F+ VL+AC+HAG+V EGW YF+ M R + I P +EHY
Sbjct: 409 HALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHY 468
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
+ DLL RAG ++ + + I + C H EL E V +L+ ++
Sbjct: 469 AAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVD 528
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
++G Y+++SN Y+A RW D R+R+ +R+KGL+K A S
Sbjct: 529 SENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACS 570
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 17/159 (10%)
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
+W+S++ + F+ M S PN S+L A L + +H+
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSM-RSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHAC 135
Query: 178 IKSNNIKVDVLLSTCLLTMYVKC---------------GAMDLARDVFDEMPVRNVVSWN 222
+ D+ ++ L+ Y K +D + VFD MPVR+VVSWN
Sbjct: 136 TVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWN 195
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATFVCVL 260
++I G+ +G +AL++ EM K G KP+ T +L
Sbjct: 196 TVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSIL 234
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW----NWNCMIAGYVAVGDLEAANELF 77
D +S+NS+I G V+NGE F M +V +++ +I + L +L
Sbjct: 292 DAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLH 351
Query: 78 E-----RMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML---ALHVRA 129
D + ++ + ++D + GN+ +A F+R+ R++V+W +++ A+H A
Sbjct: 352 GCIVRLGFDDNEFIA-SSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHA 410
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
+ + +F+ M+E G P ++VLTAC+H G + G
Sbjct: 411 ---LDAVSLFENMLEDG-VRPCYVAFMAVLTACSHAGLVDEG 448
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/456 (31%), Positives = 227/456 (49%), Gaps = 44/456 (9%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGD--LEAAN 74
S L LDL S++D + K G ARK+FD M +V +W ++ GYV G A
Sbjct: 291 SGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAM 350
Query: 75 ELFERMPDRDVVSWNC-----MIDGCVRVGNVPLALEFFNR-----MPARNVVSWNSMLA 124
+F M + V+ NC ++ C + + + + + A + V N +++
Sbjct: 351 RMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVG-NGLVS 409
Query: 125 LHVRAKSFWECLKMFDEMMES---GEAVPNEA---------------------------T 154
++ ++ K FD + E E V ++ T
Sbjct: 410 VYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFT 469
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
S+L+ A +G + G +H+ + + D+ ++ L++MY KCG + A VF++M
Sbjct: 470 YASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDME 529
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
NV++W S+I G+ HG KALELF M + G KPND T++ VLSAC+H G++ E W
Sbjct: 530 DCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWK 589
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTT 334
+F MR + I P++EHY C+VDLL R+GL+ + E I + C
Sbjct: 590 HFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFD-ADALVWRTFLGSCRV 648
Query: 335 HMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
H +++LGE AK ++E EP D YI+LSN YA +GRW+DV +R +++K + KEA SS
Sbjct: 649 HRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSS 708
Query: 395 VVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
+ +E+ K+ V + + + +Y L EL IK
Sbjct: 709 WIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIK 744
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 18/259 (6%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN----------CMIAGYVAVGDLE 71
D+VSY+S+I N A ++FD++ ++D N C+ G+ G
Sbjct: 119 DVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCL 178
Query: 72 AANELFERMPDRDVVSWNCMID----GCVRVGNVPLALEFFNRMPARNVVSWNSMLALHV 127
L D V +ID GC + ++ A + F++M +NVV+W M+
Sbjct: 179 FGFVLKTGYFDSHVCVGCELIDMFVKGC-SLADLESARKVFDKMREKNVVTWTLMITRLA 237
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDV 187
+ E + +F EM+ S VP+ TL +++ CA + LS+G +HS++ + + +D+
Sbjct: 238 QYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDL 297
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG--EKALELFLEM- 244
+ L+ MY KCG + AR VFD M NV+SW +++ GY G G +A+ +F M
Sbjct: 298 CVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNML 357
Query: 245 EKKGPKPNDATFVCVLSAC 263
+ G PN TF VL AC
Sbjct: 358 LQGGVAPNCFTFSGVLKAC 376
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 21/227 (9%)
Query: 100 NVPL-ALEFFNRM--PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
N P+ A F M R+VVS++S+++ ++ + ++MFD+++ PNE
Sbjct: 101 NDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFT 160
Query: 157 SVLTACAHLGKLSVGMWVHSFI-KSNNIKVDVLLSTCLLTMYVK-CGAMDL--ARDVFDE 212
+V+ AC G G+ + F+ K+ V + L+ M+VK C DL AR VFD+
Sbjct: 161 AVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDK 220
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACTHA----- 266
M +NVV+W MI +G ++A++LFLEM G P+ T ++S C
Sbjct: 221 MREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSL 280
Query: 267 GMVMEGWWYFDLMRRVYNIEPKVEHYGC-IVDLLARAGLVKNSEELI 312
G + W ++R ++ V GC +VD+ A+ GLV+ + ++
Sbjct: 281 GKELHSW----VIRSGLVLDLCV---GCSLVDMYAKCGLVQEARKVF 320
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/440 (31%), Positives = 224/440 (50%), Gaps = 44/440 (10%)
Query: 29 MIDGHVKNGETGA--ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------ 80
+ID + + G T ARK+FD++ RDV+ WN +I GY +G A ++ M
Sbjct: 58 LIDKYSQLGGTNVEHARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAA 117
Query: 81 PDRDVVSW---------NCMIDGCVRVGNVPLALEF------------------------ 107
P+R + +C+ + V LEF
Sbjct: 118 PNRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKV 177
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM-ESGEAVPNEATLVSVLTACAHLG 166
F+ M R++VSWNSM++ ++ E + +F +M+ + G P+ ATLV+VL A A
Sbjct: 178 FDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKA 237
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
+ G W+H +I +K+D + L+T+Y CG + +A+ VFD++P RNV+ W+++I
Sbjct: 238 DIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIR 297
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
YG+HG ++AL +F ++ + G + F+ +LSAC+HAGM EGW F M Y +
Sbjct: 298 CYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTM-ETYGVV 356
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
HY C+VDLL RAG ++ + ELI+ + ++ H + EL E+ A+
Sbjct: 357 KGEAHYACMVDLLGRAGNLEKAMELIQSMPIQPGKNVYGALLGAS-RIHKNIELAELAAE 415
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
+L L+P + G Y++L+ Y +GRW D R+R +IREK ++K S V LE K+
Sbjct: 416 KLFVLDPNNAGRYVILAQMYEDEGRWKDAARLRKIIREKEIKKPIGYSSVELESGHKKFG 475
Query: 407 VKNYSVHRKRIMYSMLSELG 426
V + + ++ L LG
Sbjct: 476 VNDETHPLTTEIFETLVSLG 495
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 47/264 (17%)
Query: 18 SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF 77
L DL N+ + + K E A+RK+FDEM RD+ +WN M++GY+A G ++ A LF
Sbjct: 150 GLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLF 209
Query: 78 ERMPDRDVVSW-------------------------NCMI----------DGCVRV---- 98
M D + + +C I GC +
Sbjct: 210 CDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYS 269
Query: 99 --GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
G + +A F+++P RNV+ W++++ + E L MF +++E G + + +
Sbjct: 270 NCGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHL-DGIVFL 328
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV- 215
S+L+AC+H G G + +++ + C++ + + G ++ A ++ MP+
Sbjct: 329 SLLSACSHAGMHEEGWHLFQTMETYGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQ 388
Query: 216 --RNVVSWNSMIMGYGLHGNGEKA 237
+NV + +++ +H N E A
Sbjct: 389 PGKNV--YGALLGASRIHKNIELA 410
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 222/410 (54%), Gaps = 15/410 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN-- 58
MY+ + AR +F++ + V +++MI G+V + A L+D+M ++ N
Sbjct: 254 MYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLC--IYGLNPT 311
Query: 59 -----CMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFN 109
M+ + DL+ +L M D D N +I + G + A+ F +
Sbjct: 312 PATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLD 371
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
M A++ VS++++++ V+ + L +F +M SG A P T++++L AC+HL L
Sbjct: 372 EMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIA-PYLETMIALLPACSHLAALQ 430
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
G H + D + ++ MY KCG + ++R++FD M R+++SWN+MI+GYG
Sbjct: 431 HGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYG 490
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
+HG +AL LF E++ G KP+D T + VLSAC+H+G+V EG ++F M + +NI+P++
Sbjct: 491 IHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRM 550
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
HY C+VDLLARAG + + I+ + C TH + E+GE V+K++
Sbjct: 551 AHYICMVDLLARAGNLDEAYTFIQRMPF-VPNVRIWGALLAACRTHKNIEMGEQVSKKIQ 609
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
L P G ++++SN Y++ GRWDD +R + R G +K S V +
Sbjct: 610 LLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEIS 659
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 151/336 (44%), Gaps = 46/336 (13%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV--RDVWNWNCMIAGYV----------A 66
L++DL +++ + K G A+ LF+ + RD+ WN MIA + +
Sbjct: 138 LSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHS 197
Query: 67 VGDLEAA------NELFERMPD-----------------------RDVVSWNCMIDGCVR 97
V ++ A + L +P +VV ++D +
Sbjct: 198 VAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAK 257
Query: 98 VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
+ A + FN + +N V W++M+ +V S + L ++D+M+ P ATL +
Sbjct: 258 CHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLAT 317
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
+L ACA L L G +H + + + +D + L++MY KCG MD A DEM ++
Sbjct: 318 MLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKD 377
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWY-- 275
VS++++I G +G EKAL +F +M+ G P T + +L AC+H + G
Sbjct: 378 TVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHG 437
Query: 276 FDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+ ++R N I+D+ ++ G + S E+
Sbjct: 438 YTVVRGFTN---DTSICNAIIDMYSKCGKITISREI 470
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
+ LA F+++P +VV WN M+ + + F + + ++ M++ G P T +L
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG-VTPTNFTFPFLLK 115
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV--RNV 218
AC+ L L +G +H+ + +D+ +ST LL MY KCG + A+ +F+ + R++
Sbjct: 116 ACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDI 175
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
V+WN+MI + H + + +M++ G PN +T V +L A + +G
Sbjct: 176 VAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQG 229
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
+T L ++ + LAR VFD++P +VV WN MI Y G ++++ L+L M + G
Sbjct: 44 ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV 103
Query: 250 KPNDATFVCVLSACT 264
P + TF +L AC+
Sbjct: 104 TPTNFTFPFLLKACS 118
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 152/475 (32%), Positives = 243/475 (51%), Gaps = 50/475 (10%)
Query: 3 SVFGRVSDARL----LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN 58
++ G++ +L L +S DLV NS++ + K G AR++FDEM V+DV W
Sbjct: 102 TMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWT 161
Query: 59 CMIAGYVAVGDLEAANE---LFERM------PDRDVVS---------WNCM----IDGC- 95
MI GY G +A LF M P+ +S +C+ I GC
Sbjct: 162 SMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCC 221
Query: 96 -------------------VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECL 136
R G + + F+ + ++N VSWN++++ R E L
Sbjct: 222 WKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEAL 281
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTM 196
+F +M G E T ++L + + G L G W+H+ + + K+ + LL M
Sbjct: 282 GLFVKMQREGFGA-TEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHM 340
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK-KGPKPNDAT 255
Y K G + A+ VFD + +VVS NSM++GY HG G++A+ELF EM +PND T
Sbjct: 341 YAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDIT 400
Query: 256 FVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
F+ VL+AC+HAG++ EG +YF+LM++ Y +EPK+ HY +VDL RAGL+ ++ I+ +
Sbjct: 401 FLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEM 459
Query: 316 SVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDV 375
++ H ++E+G A++++EL+P G + +LSN YA+ G+W DV
Sbjct: 460 PIEPNATIWGALLGAS-KMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDV 518
Query: 376 ERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
+VR +++ GL+KE A S V +E+ + + S +K +Y M L IK
Sbjct: 519 AKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIK 573
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 133/266 (50%), Gaps = 15/266 (5%)
Query: 16 DSSLTLDLVSYNSMIDGHV----KNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLE 71
D++L ++ NS HV NG R +++++ R C + G + G L
Sbjct: 60 DTNLLRPSLNPNSTTGLHVLDLINNGSLEPDRTIYNKLLKR------CTMLGKLKQGKL- 112
Query: 72 AANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVR--- 128
L D+V N ++ + G++ +A + F+ M ++VV+W SM+ + +
Sbjct: 113 VHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGY 172
Query: 129 AKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVL 188
A S L +F EM+ G PNE L S++ C LG G +H + +V
Sbjct: 173 ASSATTALVLFLEMVRDG-LRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVF 231
Query: 189 LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
+ + L+ MY +CG + +R VFDE+ +N VSWN++I G+ G GE+AL LF++M+++G
Sbjct: 232 VGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREG 291
Query: 249 PKPNDATFVCVLSACTHAGMVMEGWW 274
+ T+ +L + + G + +G W
Sbjct: 292 FGATEFTYSALLCSSSTTGSLEQGKW 317
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 132/261 (50%), Gaps = 12/261 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
MY+ G + ++RL+FD + + VS+N++I G + GE A LF +M +
Sbjct: 239 MYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFT 298
Query: 57 WNCMIAGYVAVGDLEAANELFERM--PDRDVVSW--NCMIDGCVRVGNVPLALEFFNRMP 112
++ ++ G LE L M + +V + N ++ + GN+ A + F+R+
Sbjct: 299 YSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLV 358
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+VVS NSML + + E +++F+EMM E PN+ T +SVLTAC+H G L G+
Sbjct: 359 KVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGL 418
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLH 231
+ +K ++ + T ++ ++ + G +D A+ +EMP+ N W +++ +H
Sbjct: 419 YYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMH 478
Query: 232 GN---GEKALELFLEMEKKGP 249
N G A + LE++ P
Sbjct: 479 KNTEMGAYAAQKVLELDPFYP 499
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 229/419 (54%), Gaps = 9/419 (2%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWNCMIAGYVAVGDLEAANELF 77
++VS+ +MI G ++NG A LF +M V + ++ ++ + V E E+
Sbjct: 361 NVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVI 420
Query: 78 ERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
+ +R ++D V++GN A++ F + A+++++W++MLA + + E K
Sbjct: 421 KTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAK 480
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAH-LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTM 196
+F ++++ G PNE T SV+ ACA G H++ + + +S+ L+TM
Sbjct: 481 LFHQLIKEG-IKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTM 539
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
Y K G +D A +VF R++VSWNSMI GY HG +KALE+F EM+K+ + TF
Sbjct: 540 YAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTF 599
Query: 257 VCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
+ V++ACTHAG+V +G YF+ M ++I P ++HY C++DL +RAG+++ + +I +
Sbjct: 600 IGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMP 659
Query: 317 VKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVE 376
H + ELGE+ A++LI L+P D Y++LSN YAA G W +
Sbjct: 660 FP-PGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERT 718
Query: 377 RVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAG 435
VR ++ ++ ++KE S + +++ + + + +YS LSEL I+L AG
Sbjct: 719 NVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELS--IRLKDAG 775
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 41/275 (14%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------ 80
S++D ++K R++FDEM R+V +W ++AGY G ELF +M
Sbjct: 132 TSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVL 191
Query: 81 PDRDVVS---------------------------------WNCMIDGCVRVGNVPLALEF 107
P+R VS +N +I R+G + A +
Sbjct: 192 PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDV 251
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F++M R+ V+WNSM+A +VR E ++F++M +G P T SV+ +CA L +
Sbjct: 252 FDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAG-VKPTHMTFASVIKSCASLRE 310
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIM 226
L++ + + D ++ T L+ KC MD A +F M +NVVSW +MI
Sbjct: 311 LALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMIS 370
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
G +G ++A+ LF +M ++G KPN T+ +L+
Sbjct: 371 GCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILT 405
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 152/333 (45%), Gaps = 55/333 (16%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVG-DLEAANELFERMPDRD 84
+NS+I + + G AR +FD+M +RD WN MIAGYV G DLE E+F +M
Sbjct: 232 FNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVF-EIFNKMQLAG 290
Query: 85 V----VSWNCMIDGCVRVGNVPL-----------------------------------AL 105
V +++ +I C + + L AL
Sbjct: 291 VKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDAL 350
Query: 106 EFFNRM-PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
F+ M +NVVSW +M++ ++ + + +F +M G PN T ++LT H
Sbjct: 351 SLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREG-VKPNHFTYSAILT--VH 407
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
M H+ + N + + T LL YVK G A VF+ + +++++W++M
Sbjct: 408 YPVFVSEM--HAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAM 465
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN 284
+ GY G E+A +LF ++ K+G KPN+ TF V++AC E F Y
Sbjct: 466 LAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQF----HAYA 521
Query: 285 IEPKVEHYGCI----VDLLARAGLVKNSEELIK 313
I+ ++ + C+ V + A+ G + ++ E+ K
Sbjct: 522 IKMRLNNALCVSSALVTMYAKRGNIDSAHEVFK 554
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 97/173 (56%), Gaps = 1/173 (0%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
++D ++ NV F+ M RNVVSW S+LA + + ++F +M G +P
Sbjct: 134 LVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEG-VLP 192
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
N T+ +V+ A + G + +G+ VH+ + + + + + L+++Y + G + ARDVF
Sbjct: 193 NRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVF 252
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
D+M +R+ V+WNSMI GY +G + E+F +M+ G KP TF V+ +C
Sbjct: 253 DKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSC 305
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 111/221 (50%), Gaps = 5/221 (2%)
Query: 101 VP-LALEFFNRMPAR--NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVS 157
VP +A F+++P R + N +L + R K E L +F ++ S P+E+TL
Sbjct: 40 VPHIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSS-LQPDESTLSC 98
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
V CA +G VH + V + T L+ MY+K ++ R VFDEM RN
Sbjct: 99 VFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERN 158
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
VVSW S++ GY +G ELF +M+ +G PN T V++A + G+V G
Sbjct: 159 VVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHA 218
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
++ + + E + + ++ L +R G+++++ ++ + ++
Sbjct: 219 MVVK-HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR 258
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 82/305 (26%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLF----------DEMPV 51
Y G DA +F+ DL+++++M+ G+ + GET A KLF +E
Sbjct: 438 YVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTF 497
Query: 52 RDVWNW------------------------------NCMIAGYVAVGDLEAANELFERMP 81
V N + ++ Y G++++A+E+F+R
Sbjct: 498 SSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK 557
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+RD+VSWN MI G + G ALE F+ M RN + V A +F
Sbjct: 558 ERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRN---------MDVDAVTF--------- 599
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGM-WVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
+ V+TAC H G + G + +S I ++I + +C++ +Y +
Sbjct: 600 --------------IGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRA 645
Query: 201 GAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGPKPNDATF 256
G ++ A + +EMP W +++ +H N GE A E + ++ P D+
Sbjct: 646 GMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQ-----PEDSAA 700
Query: 257 VCVLS 261
+LS
Sbjct: 701 YVLLS 705
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ G + A +F DLVS+NSMI G+ ++G+ A ++FDEM R D
Sbjct: 539 MYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVT 598
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVS-----WNCMIDGCVRVGNVPLALEFFNRM 111
+ +I G +E + F M + ++ ++CMID R G + A+ N M
Sbjct: 599 FIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEM 658
Query: 112 P-ARNVVSWNSMLA 124
P W ++L
Sbjct: 659 PFPPGATVWRTLLG 672
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/408 (33%), Positives = 217/408 (53%), Gaps = 12/408 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G + +ARLL + D+V++ ++I+G+V NG+ +A L M + V
Sbjct: 259 MYVKCGEMEEARLLLNGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVS 318
Query: 61 IAGYV-AVGDLEAANE-------LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+A + A GDL + + + +VV +ID + L+ + F +
Sbjct: 319 VASLLSACGDLVSLKHGKCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTS 378
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ WN++L+ V + +++F EM+ P+ T S+L A A L L M
Sbjct: 379 KKRTAPWNAVLSGFVHNRLARNAVQLFKEMLLE-NVQPDSPTFNSLLPAYAILADLKQAM 437
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN--VVSWNSMIMGYGL 230
+H ++ + +++ L+ +Y KCG + A +FD +P+++ ++ W ++I YG
Sbjct: 438 NMHCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGK 497
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
HG GE A+ LF +M + G KPN+ TF VL AC+HAG+V +G F+LM + Y + P V+
Sbjct: 498 HGYGEMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVDQGLSLFNLMLKKYQVIPSVD 557
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HY CIVDLL RAG + ++ LI+ + + C H + ELGEI A+ E
Sbjct: 558 HYTCIVDLLGRAGRLNDAYNLIRTMPIT-HNHAVWGALLGACVIHENVELGEIAARWTFE 616
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHL 398
LEP + G Y++L+ YAA GRW D ERVR M+ E GL+K A+S+V L
Sbjct: 617 LEPENTGNYVLLAKLYAAVGRWRDAERVRNMVNEVGLRKTPANSLVEL 664
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 158/349 (45%), Gaps = 56/349 (16%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSM----IDGHVKNGETGAARKLFDEMPVRDVWNW 57
YS +S+ + L +T L S + + + + A +LFD++P R++++W
Sbjct: 22 YSASNSLSETKKLHALIITYGLFSSSQLSSKLATTYAQCHHASYASQLFDKLPKRNLFSW 81
Query: 58 NCMIAGYVAVGDLEAANELF-------ERMPDR--------------------------- 83
N M+ YV +G A +F MPD
Sbjct: 82 NTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACSELLFVDMGVGVHGQTA 141
Query: 84 ----DVVSW--NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
D+ S+ N ++ + VG A F M R VVSWN+++ R + L+
Sbjct: 142 KCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSWNTLINGLFRNNCAEDALR 201
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
++ M++ G V + AT+VSVL AC L + +G V + +V++ LL MY
Sbjct: 202 VYSRMVDEGVGV-DCATVVSVLQACGVLKNVELGREVRALTLEKGYWGNVVVRNALLDMY 260
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
VKCG M+ AR + + M ++VV+W ++I GY ++G+ AL L M+ +G KPN +
Sbjct: 261 VKCGEMEEARLLLNGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVA 320
Query: 258 CVLSAC-----THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
+LSAC G + W +R+ NIE +V ++D+ A+
Sbjct: 321 SLLSACGDLVSLKHGKCLHAW----AIRQ--NIESEVVMETALIDMYAK 363
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 11/271 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC- 59
MY G ARL+F+ +VS+N++I+G +N A +++ M V + +C
Sbjct: 158 MYMNVGEKEAARLVFELMQERTVVSWNTLINGLFRNNCAEDALRVYSRM-VDEGVGVDCA 216
Query: 60 -MIAGYVAVG---DLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
+++ A G ++E E+ E+ +VV N ++D V+ G + A N M
Sbjct: 217 TVVSVLQACGVLKNVELGREVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGM 276
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
++VV+W +++ +V L + M G PN ++ S+L+AC L L G
Sbjct: 277 EEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEG-VKPNLVSVASLLSACGDLVSLKHG 335
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
+H++ NI+ +V++ T L+ MY KC +L+ VF + + WN+++ G+ +
Sbjct: 336 KCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFVHN 395
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
A++LF EM + +P+ TF +L A
Sbjct: 396 RLARNAVQLFKEMLLENVQPDSPTFNSLLPA 426
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 235/446 (52%), Gaps = 21/446 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVS--YNSMIDGHVKNGETGAARKLFDEMPVRDV---- 54
MYS G + DAR+LFDS LV+ +N+MI G+ + G A ++F M DV
Sbjct: 314 MYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQNDVKPDL 373
Query: 55 WNWNCM---IAGYVAVGDLEAANEL-----FERMPDRDVVSWNCMIDGCVRVGNVPLALE 106
+ + C+ IAG + L+ A+ + F+ M ++ N + D V+ ++ +
Sbjct: 374 YTFCCVFNSIAGLKCLKSLKEAHGVALKCGFDAM---EISVLNALADAYVKCESLEAGEK 430
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F +M +++VSW +M+ + + + + L +F +M G A PN T SV+TAC L
Sbjct: 431 VFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFA-PNHFTFSSVITACGGLC 489
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L G +H I ++ + + + L+ MY KCG + A+++F+ + + V+W ++I
Sbjct: 490 LLEYGQQIHGLICKASLDAESCIESALIDMYSKCGNLTEAKNIFERISNPDTVTWTAIIS 549
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
Y HG E AL+LF +ME+ K N T +C+L AC+H GMV +G F+ M Y +
Sbjct: 550 TYAQHGLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLEIFNQMEGTYGVV 609
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P++EHY C+VDLL R G + + I + ++ C H ++ELGE A+
Sbjct: 610 PEMEHYACVVDLLGRVGRLDEAVAFIDKMPIE-PDEMVWQTLLGACRIHGNAELGETAAQ 668
Query: 347 RLI--ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESK 404
+++ + EP Y++LSNTY G +D +R +++E+G++KE S + + K
Sbjct: 669 KILSTQPEPEHSSTYVLLSNTYIESGLLEDGIGLRDVMKERGIRKEPGYSWISVRGEVHK 728
Query: 405 YFVKNYSVHRKRIMYSMLSELGAHIK 430
++ ++ +K +Y+ML EL IK
Sbjct: 729 FYARDQQHPQKDKIYTMLEELTRRIK 754
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 42/282 (14%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
+LV N ++ + K + +ARK+FD M R+V++W MI G A ELF M
Sbjct: 102 NLVFLNHVVHAYSKCKDYDSARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMML 161
Query: 82 DR----DVVSWNCMIDGCV-----------------------------------RVGNVP 102
++ D +++ ++ CV ++G
Sbjct: 162 EQGLLLDGFAFSAVLQSCVGLDSVVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCE 221
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
++ FN M N VSWN+M++ + + M+E+G + PN+ T + + A
Sbjct: 222 CSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIENGVS-PNKTTFLCISKAV 280
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS-- 220
LG ++ VH + + + + T L+ MY KCG + AR +FD +V+
Sbjct: 281 GLLGDINRCHEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCLVNAP 340
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
WN+MI GY G +ALE+F M + KP+ TF CV ++
Sbjct: 341 WNAMITGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVFNS 382
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 82 DRD-VVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
DRD +V N ++ + + A + F+ M RNV SW M+ + L++F
Sbjct: 99 DRDNLVFLNHVVHAYSKCKDYDSARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFC 158
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
M+E G + A +VL +C L + G VH+ + + ++ T LL +Y K
Sbjct: 159 MMLEQGLLLDGFA-FSAVLQSCVGLDSVVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKL 217
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G + + +VF+ M N VSWN+MI G+ +G +A + + M + G PN TF+C+
Sbjct: 218 GMCECSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCIS 277
Query: 261 SA 262
A
Sbjct: 278 KA 279
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 147/328 (44%), Gaps = 15/328 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
+Y+ G + +F++ ++ VS+N+MI G NG A M V
Sbjct: 213 LYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIENGVSPNKTT 272
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ C+ +GD+ +E+ +E D + +I+ + G + A F+
Sbjct: 273 FLCISKAVGLLGDINRCHEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKF 332
Query: 113 ARNVVS--WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
A +V+ WN+M+ + +A E L+MF M ++ + P+ T V + A L L
Sbjct: 333 ANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQN-DVKPDLYTFCCVFNSIAGLKCLKS 391
Query: 171 GMWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
H +K +++ + L YVKC +++ VF +M +++VSW +M+ Y
Sbjct: 392 LKEAHGVALKCGFDAMEISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYC 451
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM-RRVYNIEPK 288
KAL +F +M +G PN TF V++AC ++ G L+ + + E
Sbjct: 452 QCSEWGKALAIFSQMCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLICKASLDAESC 511
Query: 289 VEHYGCIVDLLARAGLVKNSEELIKYVS 316
+E ++D+ ++ G + ++ + + +S
Sbjct: 512 IE--SALIDMYSKCGNLTEAKNIFERIS 537
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 13/143 (9%)
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI--KVDVLLSTCLLTMYVKCG 201
E+ + PN L+ +L +C G L +H + + + +++ ++ Y KC
Sbjct: 58 ETQQKQPNIQPLIDLLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCK 117
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
D AR VFD M RNV SW MI+ HG ALELF M ++G + F VL
Sbjct: 118 DYDSARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQ 177
Query: 262 AC-----------THAGMVMEGW 273
+C HA +V+ G+
Sbjct: 178 SCVGLDSVVFGEMVHAQVVVRGF 200
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/465 (32%), Positives = 238/465 (51%), Gaps = 27/465 (5%)
Query: 2 YSVFGRVSDARLLF----DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---PVR-D 53
YS GR DA LF + + LD+V+++S+I G+ + G A +F +M R +
Sbjct: 26 YSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPN 85
Query: 54 VWNWNCMIAGYVAVGDLEAANELF----------ERMPDRD-VVSWNCMIDGCVRVGNVP 102
V +++G +VG L E E D D + N +ID + ++
Sbjct: 86 VVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLE 145
Query: 103 LALEFFNRM--PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA-VPNEATLVSVL 159
+A F+ + R+VV+W M+ + + L++F EM + VPN+ T+ VL
Sbjct: 146 VARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVL 205
Query: 160 TACAHLGKLSVGMWVHSFI-KSNNIKVDVLL-STCLLTMYVKCGAMDLARDVFDEMPVRN 217
ACA L L G +H+++ + + I DVL + CL+ MY K G +D A+ VFD M RN
Sbjct: 206 MACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRN 265
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+SW S++ GYG+HG E A +F EM K+ + TF+ VL AC+H+GMV G F
Sbjct: 266 AISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFY 325
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMD 337
M + + ++P VEHY C+ DL RAG + + LI +S++ C TH +
Sbjct: 326 RMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSME-PTPVVWIALLSACRTHSN 384
Query: 338 SELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVH 397
EL E AK+L+EL+ + G Y +LSN YA RW DV R+R +++ G++K S V
Sbjct: 385 VELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQ 444
Query: 398 LEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSIEKDNF 442
++V + + + + +Y L++L IK G + + NF
Sbjct: 445 GRKGMETFYVGDRTHSQSQKIYETLADLIQRIK--AIGYVPQTNF 487
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 17/265 (6%)
Query: 70 LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLAL 125
+E A++++ERM +DVV+WN M+ G + G AL F +M +VV+W+S+++
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISG 60
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI------- 178
+ + E + +F +M PN TL+S+L+ CA +G L G H +
Sbjct: 61 YAQRGFGCEAMDVFRQMC-GCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKG 119
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM--PVRNVVSWNSMIMGYGLHGNGEK 236
+ N+ D+ L+ MY KC ++++AR +FDE+ R+VV+W MI GY +G+
Sbjct: 120 EHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANH 179
Query: 237 ALELFLEMEK--KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG- 293
AL+LF EM K PND T CVL AC + G + R I+ V
Sbjct: 180 ALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVAN 239
Query: 294 CIVDLLARAGLVKNSEELIKYVSVK 318
C++D+ +++G V ++ + +S +
Sbjct: 240 CLIDMYSKSGDVDTAQVVFDSMSKR 264
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 230/459 (50%), Gaps = 43/459 (9%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
DL ++++ + K+GE A++LF+EMP D+ W+ MIA Y + A +LF RM
Sbjct: 271 DLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMR 330
Query: 82 DRDVVSWN---------C----------MIDGCV--------------------RVGNVP 102
VV N C I CV + G +
Sbjct: 331 QTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIE 390
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
+++ F +P RN V+WN+++ +V+ + +F M+E + P E T SVL A
Sbjct: 391 NSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEH-DMQPTEVTYSSVLRAS 449
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
A L L G+ +HS D +++ L+ MY KCG ++ AR FD+M R+ VSWN
Sbjct: 450 ASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWN 509
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
+MI GY +HG +AL LF M+ KPN TFV VLSAC++AG++ +G +F+ M +
Sbjct: 510 AMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKD 569
Query: 283 YNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGE 342
Y+I+P +EHY C+V LL R G + +LI ++ + C H +LG
Sbjct: 570 YDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQ-PSVMVWRALLGACVIHKKVDLGR 628
Query: 343 IVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFE 402
+ A+ ++E+EP D +++LSN YA GRWD+V VR +++K ++KE S V +
Sbjct: 629 VCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVV 688
Query: 403 SKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSIEKDN 441
+ V + S +++ +ML L K AG + N
Sbjct: 689 HYFSVGDTSHPDIKLICAMLEWLNK--KTRDAGYVPDCN 725
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 159/317 (50%), Gaps = 12/317 (3%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
YSV G V AR +FD D+VS+ M+ + +N + +LF++M + N I
Sbjct: 181 YSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTI 240
Query: 62 AGYV-AVGDLEAANE-------LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+G + + LEA N + D D+ +++ + G + A F MP
Sbjct: 241 SGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPK 300
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
+++ W+ M+A + ++ E L +F M ++ VPN T SVL ACA L +G
Sbjct: 301 TDLIPWSLMIARYAQSDRSKEALDLFLRMRQTS-VVPNNFTFASVLQACASSVSLDLGKQ 359
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+HS + + +V +S ++ +Y KCG ++ + +F+E+P RN V+WN++I+GY G+
Sbjct: 360 IHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGD 419
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL-MRRVYNIEPKVEHY 292
GE+A+ LF M + +P + T+ VL A + G L ++ +YN + V
Sbjct: 420 GERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVA-- 477
Query: 293 GCIVDLLARAGLVKNSE 309
++D+ A+ G + ++
Sbjct: 478 NSLIDMYAKCGRINDAR 494
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 142/333 (42%), Gaps = 41/333 (12%)
Query: 20 TLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFER 79
+LDL + N +++ +V++ A KLFDEMP + ++ + GY A R
Sbjct: 67 SLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILR 126
Query: 80 M---------------------------------------PDRDVVSWNCMIDGCVRVGN 100
+ D +ID GN
Sbjct: 127 IFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGN 186
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
V +A F+ + +++VSW M+A + + E L++F++M G PN T+ L
Sbjct: 187 VDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYK-PNNFTISGALK 245
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
+C L +VG VH D+ + LL +Y K G + A+ +F+EMP +++
Sbjct: 246 SCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIP 305
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
W+ MI Y ++AL+LFL M + PN+ TF VL AC + + G +
Sbjct: 306 WSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVL 365
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
+ + + V I+D+ A+ G ++NS +L +
Sbjct: 366 K-FGLNSNVFVSNAIMDVYAKCGEIENSMKLFE 397
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 114/249 (45%), Gaps = 22/249 (8%)
Query: 75 ELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE 134
+ +R D+ + N +++ V+ ++ A + F+ MP N +S+ ++ + R F +
Sbjct: 60 HILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQ 119
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLL 194
L + + G V N ++L + + +H+ + D + T L+
Sbjct: 120 ALHFILRIFKEGHEV-NPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALI 178
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA 254
Y G +D+AR VFD++ +++VSW M+ Y + E++L+LF +M G KPN+
Sbjct: 179 DAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNF 238
Query: 255 TFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC----------IVDLLARAGL 304
T L +C G F++ + V+ K GC +++L A++G
Sbjct: 239 TISGALKSCL-------GLEAFNVGKSVHGCALK----GCYDHDLFVGIALLELYAKSGE 287
Query: 305 VKNSEELIK 313
+ +++ L +
Sbjct: 288 IIDAQRLFE 296
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G +H I +D+ LL YV+ ++ A +FDEMP N +S+ ++ GY
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVL 260
+AL L + K+G + N F +L
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLL 143
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/417 (30%), Positives = 215/417 (51%), Gaps = 41/417 (9%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
T D S++ + K G T A++L+ P +D+ +I+ Y GD+E+A E F
Sbjct: 283 FTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFI 342
Query: 79 RMPDRDV----------------------------------VSWNCMI-DGCV----RVG 99
+ D+ +S +C++ +G + R
Sbjct: 343 QTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFD 402
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
+ AL F M + +++WNSM++ V+A + +++F EM G+ P+ T+ S+L
Sbjct: 403 EIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKK-PDAITIASLL 461
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
+ C LG L +G +HS+I NN++V+ + T L+ MY KCG +D A VF + +
Sbjct: 462 SGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLA 521
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
+WN++I GY L+G A + +++++G KP+ TF+ VL+ACTH G+V G YF++M
Sbjct: 522 TWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIM 581
Query: 280 RRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSE 339
+ Y + P ++HY CIV LL + GL K + E I + ++ C + +
Sbjct: 582 TKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQ-PDSAVWGALLNACCIQREVK 640
Query: 340 LGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
LGE +AK+L L + G Y+++SN YA GRWDDV RVR M+++ G + SV+
Sbjct: 641 LGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVREMMKDSGGDGCSGVSVI 697
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 18/233 (7%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+ID +++G A F++M R+VVSWN ++ + + + +++F +M+ P
Sbjct: 97 LIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFK-P 155
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
N+ T+VS+L +C + G +H F +D L+ L++MY KC ++ ++ +F
Sbjct: 156 NQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLF 215
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT-----H 265
DEM ++VVSWN+MI YG +G +KA+ F EM K+G P+ T + ++SA H
Sbjct: 216 DEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFPENVH 275
Query: 266 AGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+V G+ N V C L A+ G +++L KY K
Sbjct: 276 CYVVKCGFT---------NDASVVTSLVC---LYAKQGFTNTAKQLYKYYPTK 316
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 46/279 (16%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM----- 80
+ S+ID ++K G T AR +FD+M RDV +WN +I GY G L A +LF M
Sbjct: 94 HTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENF 153
Query: 81 -PDRDVVSWNCMIDGC--------------VRVG-------------------NVPLALE 106
P++ + GC ++ G ++ +
Sbjct: 154 KPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQL 213
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+ M ++VVSWN+M+ ++ + F + + F EM++ G P+ T++++++A A
Sbjct: 214 LFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFH-PSSVTIMNLVSANAFPE 272
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
VH ++ D + T L+ +Y K G + A+ ++ P +++++ ++I
Sbjct: 273 N------VHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIIS 326
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
Y G+ E A+E F++ + KP+ + VL T+
Sbjct: 327 SYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITN 365
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%)
Query: 191 TCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPK 250
T L+ +Y+K G AR++FD+M R+VVSWN +I GY +G A++LF++M ++ K
Sbjct: 95 TSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFK 154
Query: 251 PNDATFVCVLSACTHAGMVMEG 272
PN T V +L +C ++ +G
Sbjct: 155 PNQTTIVSLLPSCGCFELIFQG 176
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 197/350 (56%), Gaps = 32/350 (9%)
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
++ Y + DL AA +F+ M DV SW CMI G + G+V A + F+RMP +N+V+W
Sbjct: 24 LVCMYGCLCDLMAAKCIFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTW 83
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
++M+ ++R F + +++F+ +++ G V NE V ++ACAHLG L+ G +
Sbjct: 84 STMINGYLRNNCFDKAVEIFEILIDEG-LVANE---VGAVSACAHLGALAAGEKAYEHAI 139
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
N+ ++V+L T ++ MY +CG ++ A VF+EM ++V+SW S+I G +HG E+ALE
Sbjct: 140 RINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYAEEALE 199
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
F M K G P D TF VL A +H G+V +G F+ M+R Y +EP++EHYGC+VDLL
Sbjct: 200 YFYVMVKNGIVPRDITFTAVLKAYSHGGLVEKGQEIFESMKRDYRLEPRLEHYGCMVDLL 259
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
RAG ++ +E I + +K ++P G Y
Sbjct: 260 GRAGKLEEAENFILEMPIKPNA----------------------------PMKPEHSGYY 291
Query: 360 IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKN 409
+LSN YA +W D +R +++EKG++K+ S++ ++ ++ + N
Sbjct: 292 ALLSNIYARTNKWKDATVMRRLMKEKGVRKQPGYSLIEIDGKTHEFTIGN 341
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 44/256 (17%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY + A+ +F D+ S+ MI G+ K G+ +ARKLFD MPV+++ W+ M
Sbjct: 27 MYGCLCDLMAAKCIFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTM 86
Query: 61 IAGYVAVGDLEAANELFERMPDR------------------------------------D 84
I GY+ + A E+FE + D +
Sbjct: 87 INGYLRNNCFDKAVEIFEILIDEGLVANEVGAVSACAHLGALAAGEKAYEHAIRINLDLN 146
Query: 85 VVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML---ALHVRAKSFWECLKMFDE 141
V+ ++D R GNV A+ F M ++V+SW S++ A+H A+ E L+ F
Sbjct: 147 VILGTAIVDMYARCGNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYAE---EALEYFYV 203
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKC 200
M+++G VP + T +VL A +H G + G + +K + ++ + C++ + +
Sbjct: 204 MVKNG-IVPRDITFTAVLKAYSHGGLVEKGQEIFESMKRDYRLEPRLEHYGCMVDLLGRA 262
Query: 201 GAMDLARDVFDEMPVR 216
G ++ A + EMP++
Sbjct: 263 GKLEEAENFILEMPIK 278
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 212/420 (50%), Gaps = 46/420 (10%)
Query: 15 FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAAN 74
FDS DL N++ID + K G A +F M RD+ +W+ +IAGY G + +
Sbjct: 269 FDS----DLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESF 324
Query: 75 ELFERMPD---------------------------------------RDVVSWNCMIDGC 95
EL+ RM + DVV + ++D
Sbjct: 325 ELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVVVGSALVDMY 384
Query: 96 VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
G++ A F M +++ WNS++A + F F E+ + E PN TL
Sbjct: 385 ANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVA-EHRPNHITL 443
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
VSVL C +G L G +H + + + +++ + L+ MY KCG ++L VF++M V
Sbjct: 444 VSVLPICTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQMMV 503
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWY 275
+N +++N+MI G HG GEK L+ + +M + G KPN TF+ +LSAC+HAG+V GW
Sbjct: 504 KNTITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISLLSACSHAGLVDRGWLL 563
Query: 276 FDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTH 335
++ M Y I+P +EHY C+VDL+ R G + + + I + V C H
Sbjct: 564 YNSMVNDYGIKPDMEHYSCMVDLIGRTGDLDGAYKFITTMPVT-PDANVLGSLLGACRLH 622
Query: 336 MDSELG-EIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
EL ++ A+ + +L D G Y++LSN YA+ RW+D+ +VR +I++KGL+K+ SS
Sbjct: 623 NKVELADQLTAEHIFQLNTEDSGHYVLLSNLYASGKRWEDMSKVRSLIKDKGLEKKPGSS 682
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 135/274 (49%), Gaps = 10/274 (3%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAV 67
+ DAR +FD DL ++ ++I G+V NGE A LF +M + + + ++A + V
Sbjct: 187 LEDARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPV 246
Query: 68 -GDLEAANELFERMP--------DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVS 118
G L +L M D D+ N +ID + G A F+ M R++VS
Sbjct: 247 CGRLMEGLKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVS 306
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
W++++A + + + E +++ M+ G NE + +VL A L G +H+F+
Sbjct: 307 WSTLIAGYSQNGMYKESFELYVRMVNMG-LTTNEIVVSTVLPALGKLKLFKQGKEMHNFV 365
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+ DV++ + L+ MY CG++ A +F M +++ WNS+I GY L G+ + A
Sbjct: 366 LKQGLLTDVVVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAF 425
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
F E+ +PN T V VL CT G + +G
Sbjct: 426 FTFREIWVAEHRPNHITLVSVLPICTQIGALRQG 459
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%), Gaps = 4/182 (2%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+++ V G+ A FF+++P ++ ++WN++L + + +F ++ + M+ G A P
Sbjct: 76 LVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFA-P 134
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
+ T VL AC+ L + +G WV+ I N K ++ + L+ M+VKC +++ AR VF
Sbjct: 135 DNYTYPLVLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKVF 194
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
DEM VR++ +W ++I G +G ++A+ LF +M +G K + VL C G +M
Sbjct: 195 DEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVC---GRLM 251
Query: 271 EG 272
EG
Sbjct: 252 EG 253
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 137/325 (42%), Gaps = 42/325 (12%)
Query: 29 MIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------PD 82
+++ +V G A F ++P + WN ++ + + + + + M PD
Sbjct: 76 LVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPD 135
Query: 83 R----------------DVVSW----------------NC-MIDGCVRVGNVPLALEFFN 109
++ W C +ID V+ ++ A + F+
Sbjct: 136 NYTYPLVLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKVFD 195
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK-L 168
M R++ +W +++ +V + E + +F +M G + + SVL C L + L
Sbjct: 196 EMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKA-DSVIVASVLPVCGRLMEGL 254
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
+GM +H + D+ +S ++ MY KCG D A VF M R++VSW+++I GY
Sbjct: 255 KLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGY 314
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
+G +++ EL++ M G N+ VL A + +G + + + +
Sbjct: 315 SQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLK-QGLLTD 373
Query: 289 VEHYGCIVDLLARAGLVKNSEELIK 313
V +VD+ A G +K +E + +
Sbjct: 374 VVVGSALVDMYANCGSIKEAESIFR 398
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 177/305 (58%), Gaps = 2/305 (0%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM-ESGEAV 149
++D R G V A F MP +N+VSW++M+A + + + + L++F MM E+ + V
Sbjct: 220 LLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTV 279
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
PN T+VSVL ACA L L G VH+++ + + + L+TMY +CG + + V
Sbjct: 280 PNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRV 339
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
FD M R+V+SWNS+I YG+HG G+KA+++F M +G P+ TF+ VL AC+HAG+V
Sbjct: 340 FDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLV 399
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXX 329
E F+ M Y I P++EHY C+VD+L RA + + ELI+ + K
Sbjct: 400 EEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFK-PGPTVWGSLL 458
Query: 330 XXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQK 389
C H + EL E + L ELEP + G Y++LS+ YA W+DV RVR + +GLQK
Sbjct: 459 GSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQK 518
Query: 390 EAASS 394
+ S
Sbjct: 519 IPSCS 523
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 135/311 (43%), Gaps = 20/311 (6%)
Query: 20 TLDLVSYNS--MIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF 77
T D+ S N+ +I + G A +L P + +I + L ++
Sbjct: 38 TKDIKSNNNDDLIQSLCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVH 97
Query: 78 ERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFW 133
R+ D+D +I+ +G+V A + F+ + + WN++ A
Sbjct: 98 HRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGE 157
Query: 134 ECLKMFDEMMESGEAVP-NEATLVSVLTACAHLGKLSV-----GMWVHSFIKSNNIKVDV 187
+ L ++ +M G +P N T VL AC + +LS+ G +H+ I + + V
Sbjct: 158 DLLVLYGQMNWIG--IPSNRFTYTYVLKACV-VSELSICPLRKGKEIHAHILRHGYEGHV 214
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF--LEME 245
+ T LL +Y + G + A VF MP +N+VSW++MI Y + KALELF + +E
Sbjct: 215 HVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLE 274
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWW-YFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
PN T V VL AC + G + ++RR ++ + ++ + R G
Sbjct: 275 ACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRR--GLDSTLPVLNTLITMYGRCGE 332
Query: 305 VKNSEELIKYV 315
+ + + Y+
Sbjct: 333 ISTGQRVFDYM 343
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 118/262 (45%), Gaps = 16/262 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR---DVWNW 57
+Y+ FG VS A +F + ++VS+++MI + KN A +LF M + V N
Sbjct: 223 VYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNP 282
Query: 58 NCMIAGYVAVGDLEAANE-------LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
M++ A L A + R D + N +I R G + F+
Sbjct: 283 ITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDY 342
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL-S 169
M R+V+SWNS+++++ + +++F+ M+ G + P+ T ++VL AC+H G +
Sbjct: 343 MKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVS-PSYITFITVLCACSHAGLVEE 401
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGY 228
+ S + I + C++ + + +D A ++ M + W S++
Sbjct: 402 AKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSC 461
Query: 229 GLHGN---GEKALELFLEMEKK 247
+H N E+A + E+E K
Sbjct: 462 RIHCNVELAERASAMLFELEPK 483
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 210/369 (56%), Gaps = 3/369 (0%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N ++ YV G + A ++FE + R VVSW+C ++G V+ +V F+ MP RN V
Sbjct: 162 NALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEV 221
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
+W M+ +V E + EM+ + TL SVL+AC+ G + VG WVH +
Sbjct: 222 AWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCY 281
Query: 178 -IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
+K + V++ T L+ MY KCG ++ A VF M RNVV+WN+M+ G +HG G+
Sbjct: 282 AVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKI 341
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
A+++F M ++ KP+ TF+ +LSAC+H+G+V +GW YF + VY I+P++EHY C+V
Sbjct: 342 AVDMFPSMVEE-VKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYACMV 400
Query: 297 DLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDI 356
LL RAG ++ +E ++K + + C H +LGE + + L+E++P++
Sbjct: 401 GLLGRAGRLEEAEIMVKNMRIP-PNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNT 459
Query: 357 GPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKR 416
+I+LSN YA G+ + +R +++++G++K S ++++ ++ + S R
Sbjct: 460 EYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVDGKLHQFIAGDKSHTRTS 519
Query: 417 IMYSMLSEL 425
+Y L E+
Sbjct: 520 EIYMKLDEM 528
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 125/294 (42%), Gaps = 54/294 (18%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y FG V +AR +F+ +VS++ ++G VK + R LFDEMP R+ W M
Sbjct: 167 VYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVM 226
Query: 61 IAGYVAVGDLEAANELFERMP--------------------------------------- 81
I GYV G + A L + M
Sbjct: 227 IVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEM 286
Query: 82 --DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECL 136
D V+ ++D + G + AL F M RNVV+WN+M LA+H K +
Sbjct: 287 GLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKI---AV 343
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM-WVHSFIKSNNIKVDVLLSTCLLT 195
MF M+E E P+ T +++L+AC+H G + G + H IK ++ C++
Sbjct: 344 DMFPSMVE--EVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYACMVG 401
Query: 196 MYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGN---GEKALELFLEME 245
+ + G ++ A + M + N V S+I HG GEK + LEM+
Sbjct: 402 LLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMD 455
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 207/386 (53%), Gaps = 11/386 (2%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+ S +D +++I + K GE ARK+FD M V+D+ N +++GY G
Sbjct: 157 LVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNE 216
Query: 73 ANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLA 124
A L E M + +VV+WN +I G + + + E F M +VVSW S+L+
Sbjct: 217 ALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLS 276
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
V+ E F +M+ G P AT+ ++L ACA ++ G +H + ++
Sbjct: 277 GFVQNFRNEEAFDAFKKMLLLG-FCPTSATISALLPACATEARVRFGKEIHGYALVIGVE 335
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
D+ + + L+ MY KCG + AR +F +MP +N V+ NSMI GY HG E+A+ELF +M
Sbjct: 336 DDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQM 395
Query: 245 EKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
E +G PK + TF L+AC+H G + G F +M+ Y IEP++EHY C+VDL RAG
Sbjct: 396 EMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAG 455
Query: 304 LVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLS 363
++ + +IK + VK C H EL E+ AK L ELEP G ++LS
Sbjct: 456 KLEEAYGIIKSMPVK-PDLFVWGALLAACRNHGHVELAEVAAKHLSELEPESAGNRLLLS 514
Query: 364 NTYAAQGRWDDVERVRVMIREKGLQK 389
+ YA G W VER++ I++ L+K
Sbjct: 515 SLYADAGTWGKVERIKRRIKKGKLRK 540
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 5/208 (2%)
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRV----GNVPLALEFFNRMPARN 115
+I Y L+ +L + V +N + + + G + +A + F+++P N
Sbjct: 35 LIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTN 94
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV-SVLTACAHLGKLSVGMWV 174
+ W +++A R L++F EM + N ++ SVL AC H+G G V
Sbjct: 95 IHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQV 154
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
H + + ++D +S+ L+ MY KCG + AR VFD M V+++V+ N+++ GY G
Sbjct: 155 HCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLP 214
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSA 262
+AL L M+ G PN T+ ++S
Sbjct: 215 NEALSLVENMKLMGVNPNVVTWNALISG 242
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM-----PVRDVW 55
MY+ G +S+AR LF + V+ NSMI G+ +G A +LF++M P D
Sbjct: 347 MYAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHL 406
Query: 56 NWNCMIAGYVAVGDLEAANELFERMPDRDVVS-----WNCMIDGCVRVGNVPLALEFFNR 110
+ + VGD+E LF+ M ++ + + CM+D R G + A
Sbjct: 407 TFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKS 466
Query: 111 MPAR-NVVSWNSMLA 124
MP + ++ W ++LA
Sbjct: 467 MPVKPDLFVWGALLA 481
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 214/419 (51%), Gaps = 47/419 (11%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
L +L + +S+ID + K G ARK++ MP V + N +IAGY EA N L E
Sbjct: 475 LDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGYAIKDTKEAINLLHE 534
Query: 79 RM-----PDRDVVSWNCMIDGCVRVGNVPLALE--------------------------- 106
P +++ +ID C V L ++
Sbjct: 535 MQILGLKPSE--ITFASLIDCCKESPKVILGMQIHCAILKNGLLCGSEFLGTSLLGMYMD 592
Query: 107 ----------FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
F +++V W ++++ H + + L ++ EM ++ +P++AT V
Sbjct: 593 SQKLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQALNLYREMRDNN-ILPDQATFV 651
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
+VL ACA L L G +HS I +D L S+ L+ MY KCG + A VF+E+P++
Sbjct: 652 TVLRACALLSSLQDGQEIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSAAKVFEELPIK 711
Query: 217 -NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWY 275
+V+SWNSMI+G+ +G E+AL++F EM P+D TF+ VL+AC+HAG+V EG
Sbjct: 712 KDVISWNSMIVGFAKNGYAERALKVFDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQI 771
Query: 276 FDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTH 335
FD M Y+I P+V+H+ C+VDLL R G ++ +EE I + V+ C+ H
Sbjct: 772 FDNMVNYYSIHPRVDHHACMVDLLGRCGFLEEAEEFIDKLDVE-PNAMIWANLLGACSIH 830
Query: 336 MDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
D + G A++LIELEP + PY++L N +A G WD+ + +R + + +QK S
Sbjct: 831 GDEKRGLRAAEKLIELEPQNSSPYVLLYNMHAGSGHWDEAKSLRRTMVQNEVQKTPGCS 889
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 140/281 (49%), Gaps = 12/281 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDV 54
MY + DA+ +FD ++V +N+++ + +NG +LF EM P
Sbjct: 286 MYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFT 345
Query: 55 WNW---NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
++ +C ++ +G + + +R D V+ N ++D + G + A + F RM
Sbjct: 346 YSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVN-NALVDMYAKAGALKEARKQFERM 404
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
R+ +SWN++L +V+ + E MF M G VP+E + S+L+AC ++ L G
Sbjct: 405 KYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHG-VVPDEVCMASILSACGNIKVLEAG 463
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
+ H + ++ + L+ MY KCG ++ AR ++ MP +VVS N++I GY +
Sbjct: 464 LQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGYAIK 523
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
E A+ L EM+ G KP++ TF ++ C + V+ G
Sbjct: 524 DTKE-AINLLHEMQILGLKPSEITFASLIDCCKESPKVILG 563
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 162/353 (45%), Gaps = 45/353 (12%)
Query: 2 YSVFGRVSDARLLFD---SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP-VRDVWNW 57
Y G DA LFD S LD + ++++ V G+ A +LFDEM +V W
Sbjct: 151 YVRVGMFDDALQLFDEMQSGFVLDELVIVTVLNACVNLGKLDHACELFDEMDGCGNVVAW 210
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMI------------------------- 92
N MI+G+ G + A E + +M V+S +
Sbjct: 211 NVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGDLGCGLLVHGEAVK 270
Query: 93 ---DGCVRVGNVPL-----------ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKM 138
+ V V + + A + F+ + RNVV WN++L ++ + + +++
Sbjct: 271 LGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMEL 330
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F EMM G P+E T S+L++CA L +G +HS I ++ ++ L+ MY
Sbjct: 331 FSEMMGCGND-PDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYA 389
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
K GA+ AR F+ M R+ +SWN++++GY +A +F M + G P++
Sbjct: 390 KAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMAS 449
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
+LSAC + ++ G + L ++ ++ + ++D+ ++ G ++++ ++
Sbjct: 450 ILSACGNIKVLEAGLQFHGLSVKL-GLDTNLFAGSSLIDMYSKCGGIEDARKI 501
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 150/290 (51%), Gaps = 24/290 (8%)
Query: 41 AARKLFDE---MPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDR---DVVSWNCMIDG 94
+AR LF+ + D + +I GYV VG + A +LF+ M D + +++
Sbjct: 125 SARTLFNSVSRLDNLDTATFTALIGGYVRVGMFDDALQLFDEMQSGFVLDELVIVTVLNA 184
Query: 95 CVRVGNVPLALEFFNRMPA-RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
CV +G + A E F+ M NVV+WN M++ H + E ++ + +M +G + + +
Sbjct: 185 CVNLGKLDHACELFDEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKMRMNG-VISSRS 243
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
TL SVL+A A LG L G+ VH + V +++ L+ MY KC + A+ VFD +
Sbjct: 244 TLASVLSAVAGLGDLGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVV 303
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW 273
RNVV WN+++ Y +G +ELF EM G P++ T+ +LS+C +
Sbjct: 304 CDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCA-------CF 356
Query: 274 WYFDLMRRVYN--IEPKVEHYGCI----VDLLARAGLVKNSE---ELIKY 314
+ D+ R++++ I+ + C+ VD+ A+AG +K + E +KY
Sbjct: 357 DFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQFERMKY 406
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 153/342 (44%), Gaps = 46/342 (13%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
T +L N+++D + K G ARK F+ M RD +WN ++ GYV + A +F
Sbjct: 374 FTDNLCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFR 433
Query: 79 RMP---------------------------------------DRDVVSWNCMIDGCVRVG 99
RM D ++ + + +ID + G
Sbjct: 434 RMNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCG 493
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
+ A + ++ MP +VVS N+++A + K E + + EM G P+E T S++
Sbjct: 494 GIEDARKIYSCMPEWSVVSMNALIAGYA-IKDTKEAINLLHEMQILGLK-PSEITFASLI 551
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDV-LLSTCLLTMYVKCGAMDLARDVFDEMP-VRN 217
C K+ +GM +H I N + L T LL MY+ + +F E+ +++
Sbjct: 552 DCCKESPKVILGMQIHCAILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKS 611
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+V W ++I G+ + ++AL L+ EM P+ ATFV VL AC + +G
Sbjct: 612 IVLWTALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHS 671
Query: 278 LMRRV-YNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
L+ ++++ +VD+ A+ G VK++ ++ + + +K
Sbjct: 672 LIFHTGFDLDELTS--SALVDMYAKCGDVKSAAKVFEELPIK 711
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE- 212
+ + L++C L L G VH+ I N + D LL+ L+ Y KC ++ AR +F+
Sbjct: 74 SFSTTLSSCTKLENLEFGTSVHTSIIKNGFESDTLLTRHLIHFYAKCKCLNSARTLFNSV 133
Query: 213 --MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
+ + ++ ++I GY G + AL+LF EM+ G ++ V VL+AC + G +
Sbjct: 134 SRLDNLDTATFTALIGGYVRVGMFDDALQLFDEMQ-SGFVLDELVIVTVLNACVNLGKLD 192
Query: 271 EGWWYFDLMRRVYNI 285
FD M N+
Sbjct: 193 HACELFDEMDGCGNV 207
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-DVWNWNCMIAGYVAVGDLE 71
L+F + LD ++ ++++D + K G+ +A K+F+E+P++ DV +WN MI G+ G E
Sbjct: 672 LIFHTGFDLDELTSSALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMIVGFAKNGYAE 731
Query: 72 AANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
A ++F+ M D V++ ++ C G V + F+ M
Sbjct: 732 RALKVFDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQIFDNM 775
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 210/384 (54%), Gaps = 22/384 (5%)
Query: 49 MPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
P D + ++ Y G + + +F+R+ + D+ +WN +++ R + F
Sbjct: 282 QPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSF 341
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
+ A E L +F +M G PNE T+V++++AC++LG +
Sbjct: 342 DD------------------ADFSLESLYLFRDMQVIG-IRPNEVTIVALISACSNLGAV 382
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV--RNVVSWNSMIM 226
S G WVH F+ N IK++ + T + MY KCG ++LA VFD+MP R+ + +MI
Sbjct: 383 SQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIG 442
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
G+ +HG G +ALEL+ +M+ KG P+ ATFV + AC+H G+V EG F M+ V+ +E
Sbjct: 443 GFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVE 502
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
PK+EHYGC++DLL RAG +K +EE + + +K H + +GE+
Sbjct: 503 PKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAA-RIHGNLGVGEVALT 561
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
+LIELEP G Y++LSN YA+ GR +DV+RVR +++ G+ K S+V ++ ++
Sbjct: 562 KLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFL 621
Query: 407 VKNYSVHRKRIMYSMLSELGAHIK 430
+ S + +Y ++E+ + ++
Sbjct: 622 TGDRSHPFSKEIYLKIAEINSRLE 645
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 100 NVPLALEFFNRMPARNVVSWNSMLAL---HVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
N+P A + FN + + +N++++ ++++++ + PN T
Sbjct: 195 NLPYAFKIFNYISNPTIFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFP 254
Query: 157 SVLTAC-AHLGKLSVGMWVHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
S+ AC ++ G +H+ + K D + LL Y K G M ++R +FD +
Sbjct: 255 SLFKACCSNQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRIN 314
Query: 215 VRNVVSWNSMIMGYG----------LHGNGEKALE---LFLEMEKKGPKPNDATFVCVLS 261
++ +WN ++ Y + + +LE LF +M+ G +PN+ T V ++S
Sbjct: 315 EPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALIS 374
Query: 262 ACTHAGMVMEGWW 274
AC++ G V +G+W
Sbjct: 375 ACSNLGAVSQGFW 387
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 144/479 (30%), Positives = 229/479 (47%), Gaps = 50/479 (10%)
Query: 6 GRVSDARLLF----DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNW 57
G V A+ LF + D +S+N MI GHV N A LF ++ + D +
Sbjct: 350 GNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTL 409
Query: 58 NCMIAG-----------------------------------YVAVGDLEAANELFERMPD 82
++ G Y D+ AA F+ + +
Sbjct: 410 GSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISE 469
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRAKSFWECLKM 138
RD +WN +I G R + E RM + NV +WNS+LA V K + +++
Sbjct: 470 RDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQL 529
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F+EM S P+ T+ +L AC+ L + G VH++ D + L+ MY
Sbjct: 530 FNEMQVS-SLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYA 588
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
KCG++ V++++ N+V N+M+ Y +HG+GE+ + +F M +P+ TF+
Sbjct: 589 KCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLS 648
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
VLS+C HAG + G+ F LM YNI P ++HY C+VDLL+RAG + + +LIK + ++
Sbjct: 649 VLSSCVHAGSIKIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPME 707
Query: 319 XXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERV 378
C H + LGEI A++LIELEP + G Y++L+N YA+ GRW D+ +
Sbjct: 708 -ADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKT 766
Query: 379 RVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSI 437
R ++ +KG+QK S + D + + S R +Y ML L I++ S+
Sbjct: 767 RELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFMLDNLTKFIRIKEHKSM 825
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 138/273 (50%), Gaps = 8/273 (2%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
V +V+ N +I Y G L+ A ++ E M +D VSWN +I CV G V AL+
Sbjct: 166 VTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLEN 225
Query: 111 MPAR----NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
M NVV+W++++ E +++F M+ +G A P+ TL SVL AC+ +
Sbjct: 226 MLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVA-PDARTLASVLPACSRMK 284
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L VG +H +I + + + ++ L+ MY +CG M A +F + + S+N+MI+
Sbjct: 285 WLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIV 344
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF-DLMRRVYNI 285
GY +GN KA ELF +ME++G + + ++ C++S M + F DL+ I
Sbjct: 345 GYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLME--GI 402
Query: 286 EPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
EP G I+ A ++ +E+ VK
Sbjct: 403 EPDSFTLGSILTGFADMTCIRQGKEIHSIAIVK 435
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 130/268 (48%), Gaps = 20/268 (7%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA---- 113
N ++ Y GD+++A ++F + + S+N MI G + GNV A E F +M
Sbjct: 309 NALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVE 368
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMF-DEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+ +SWN M++ HV F + L +F D +ME E P+ TL S+LT A + + G
Sbjct: 369 RDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIE--PDSFTLGSILTGFADMTCIRQGK 426
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+HS ++ + + L+ MY KC + A+ FDE+ R+ +WN++I GY
Sbjct: 427 EIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCN 486
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN------IE 286
K EL M+ G +PN T+ +L AG+V +DL +++N +
Sbjct: 487 QIGKIRELVERMKSDGFEPNVYTWNSIL-----AGLVENKQ--YDLAMQLFNEMQVSSLR 539
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKY 314
P + G I+ ++ + +++ Y
Sbjct: 540 PDIYTVGIILAACSKLATIHRGKQVHAY 567
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV-LTAC 162
A F++M +N+ SW ++L LH+ F++ +F+E + G + + V L C
Sbjct: 85 AWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNIC 144
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
LG L +G VH + + +V + L+ MY KCG++D A+ V + M ++ VSWN
Sbjct: 145 CGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWN 204
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
S+I +G +AL+L M +PN T+ V+
Sbjct: 205 SIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGG 244
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 239/451 (52%), Gaps = 20/451 (4%)
Query: 2 YSVFGRVSDARLLFD--SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVW 55
Y GR+++A +F D+VS+N+MI ++ E A +LF EM D++
Sbjct: 185 YGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVDMF 244
Query: 56 NWNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMID---GCVRVGNVPLALEFF 108
++ + + DL + +M R+ + +ID C G + ++ F
Sbjct: 245 TMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLE-CMKVF 303
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWE-CLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
+P ++V WN+M++ + + E L F EM G P++ + V V++AC++L
Sbjct: 304 EEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVG-FCPDDCSFVCVISACSNLSS 362
Query: 168 LSVGMWVHSFIKSNNIKVD-VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
SVG VH+ ++I + V ++ + MY KCG + AR +FD MP +N VS NSMI
Sbjct: 363 PSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIA 422
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
GY HG ++L+LF M ++ PN+ TF+ VLSAC H G V EG YF++M+ + IE
Sbjct: 423 GYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNMMKEKFGIE 482
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P+ EHY C++DLL RAG + +E +I+ + C H + EL A
Sbjct: 483 PEAEHYSCMIDLLGRAGKLNKAERIIETMPFD-PGSIEWAALLGACKKHGNVELAVKAAN 541
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
+ ++LEP + PY+MLSN YA+ RW++ V+ ++RE+G++K+ S + ++ +
Sbjct: 542 KFLQLEPYNAAPYVMLSNVYASANRWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFV 601
Query: 407 VKNYSVHRKRIMYSMLSELGAHIKLSPAGSI 437
++ S R + +++ +SEL +KL AG +
Sbjct: 602 AEDTSHPRIKEIHTYMSEL--LMKLKQAGYV 630
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 145/306 (47%), Gaps = 43/306 (14%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+YS FG S+A F + ++ SYN++I K+ A +LFDE+P DV ++N +
Sbjct: 54 LYSKFGTFSNALTAFHFTGYPNVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTL 113
Query: 61 IAGYVAVGDLEAANELFERMPDRDVV------------------------------SWNC 90
IA + G+ A +F+ + + +V ++C
Sbjct: 114 IAVHARRGECGQAVSVFKEVREVGLVLDGFTLSGVISASVEDVGLVRQLHCFALLCGYDC 173
Query: 91 MIDGC-------VRVGNVPLALEFFNRM--PARNVVSWNSMLALHVRAKSFWECLKMFDE 141
C R+G + A F M R++VSWN+M+ + + + L++F E
Sbjct: 174 YASVCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGE 233
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M G V + T+ SVLTA L L+ GM H + + + + + L+ +Y KC
Sbjct: 234 MERMGLEV-DMFTMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCA 292
Query: 202 --AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN-GEKALELFLEMEKKGPKPNDATFVC 258
M VF+E+P ++V WN+MI G+ H + E AL F EM++ G P+D +FVC
Sbjct: 293 PHGMLECMKVFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVC 352
Query: 259 VLSACT 264
V+SAC+
Sbjct: 353 VISACS 358
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/498 (29%), Positives = 239/498 (47%), Gaps = 78/498 (15%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PV---- 51
Y+ G V D L+FD D VSYN+MI N +G A + F M P
Sbjct: 107 YAKVGLVEDLNLVFDRMACRDSVSYNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSY 166
Query: 52 -----------------------------RDVWNWNCMIAGYVAVGDLEAANELFERMPD 82
++V+ WN + Y GD++ A LF+ M +
Sbjct: 167 VNALQACSQLLDFRLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGMVN 226
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMP--------------------------ARNV 116
+++VSWN MI G V++G + FFN+M ARN+
Sbjct: 227 KNLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNM 286
Query: 117 ---------VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
+ W +M+ + ++ + L +F EM+ G P+ T+ +V+++CA L
Sbjct: 287 FDKIDKKDEICWTTMIVGYAQSGREEDALMLFSEMLR-GNVRPDSHTISTVVSSCAKLAS 345
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L G VH + + ++L+S+ L+ MY KCG AR +F+ MP++NV+ WNSMI+G
Sbjct: 346 LYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLDARVIFETMPIKNVIIWNSMILG 405
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y +G E+AL L+ M ++ KP++ +FV VLSAC + MV EG +FD + + P
Sbjct: 406 YAQNGEAEEALTLYERMLQENFKPDNISFVGVLSACINTNMVKEGRKHFDSISE-QGMTP 464
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
++HY C++ LL R+G + + +LIK + K + D + E+ A
Sbjct: 465 TLDHYACMIILLGRSGNIDKALDLIKGMPHKPDCRIWSALLSV--CSKGDIKTAEVAANH 522
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFV 407
+ +L+P + G YIMLSN YAA GRW DV VR +++ K +K +A S V + ++
Sbjct: 523 IFQLDPHNAGSYIMLSNLYAACGRWKDVAVVRSLMKSKNAKKFSAYSWVEIGKKVHRFVS 582
Query: 408 KNYSVHRKRIMYSMLSEL 425
+++ +YS L+ L
Sbjct: 583 DDHNHPEMEKIYSELNRL 600
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 6/257 (2%)
Query: 26 YNSMIDGHVKNGETGAARKLFDEMPVR-----DVWNWNCMIAGYVAVGDLEAANELFERM 80
Y ++ ++ + A++L M ++ D + N ++ Y G + A +LF++M
Sbjct: 33 YTRLVLHCAQSNDFNQAKRLQSHMELQLFQPTDSFIHNQLLHLYAKCGKISDAQQLFDKM 92
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFD 140
RD+ SWN ++ +VG V F+RM R+ VS+N+M+A + L+ F
Sbjct: 93 SKRDIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSVSYNTMIACFASNWLSGKALRFFV 152
Query: 141 EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKC 200
M E G P + + V+ L AC+ L +G +H + + +V + + +Y KC
Sbjct: 153 RMQEDGFR-PTQYSYVNALQACSQLLDFRLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKC 211
Query: 201 GAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
G +D AR +FD M +N+VSWN MI GY G ++ + F +M+ G KP+ T VL
Sbjct: 212 GDIDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVL 271
Query: 261 SACTHAGMVMEGWWYFD 277
+A +G V + FD
Sbjct: 272 NAYFQSGRVDDARNMFD 288
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 228/447 (51%), Gaps = 45/447 (10%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
+ ++ ++K G T A LFDEMP +D +WN +++G +G L +F +M +
Sbjct: 84 DQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSEL 143
Query: 87 SWN-----CMIDGCV-----------------------------------RVGNVPLALE 106
N +I CV + G V A
Sbjct: 144 KLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFR 203
Query: 107 FFNRMPA--RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
F+ MP +++VSWNS++A+ + E FD MM P++AT+VS+L AC +
Sbjct: 204 LFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFD-MMRVNGFFPDDATMVSLLQACEN 262
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
+ +H I + + ++ + T LL +Y K G ++ +R VF+E+ + V+W +M
Sbjct: 263 FPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAM 322
Query: 225 IMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
+ GY +HG G++A+E F + ++G +P+ TF +LSAC+H+G+V EG ++F +M VY
Sbjct: 323 LAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVY 382
Query: 284 NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEI 343
++P+++HY C+VDLL R GL+ ++ ELIK + + C H + +LG+
Sbjct: 383 KVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFE-PNSGVWGALLGACRVHRNIDLGKE 441
Query: 344 VAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFES 403
AK LI L+P D YIMLSN Y+A G W+D +VR +++ K L + S + +
Sbjct: 442 AAKNLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLMKNKVLTRNQGCSFIEHGNKIH 501
Query: 404 KYFVKNYSVHRKRIMYSMLSELGAHIK 430
++ V +Y+ ++ L E+ I+
Sbjct: 502 RFVVDDYTHPDSHRIHKKLEEVMKKIQ 528
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
RD + ++ +++G A F+ MP ++ VSWNS+++ + ECL +F +M
Sbjct: 78 RDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKM 137
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
E NE T +SV++AC G +VH + +V + L+ MY K G
Sbjct: 138 KSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGF 197
Query: 203 MDLARDVFDEMP--VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVL 260
++ A +F EMP +++VSWNS++ +G +A F M G P+DAT V +L
Sbjct: 198 VESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLL 257
Query: 261 SAC 263
AC
Sbjct: 258 QAC 260
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 115/266 (43%), Gaps = 17/266 (6%)
Query: 1 MYSVFGRVSDARLLFDS--SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN 58
MY FG V A LF +VS+NS++ +NG A FD M V + +
Sbjct: 191 MYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDD 250
Query: 59 CMIAGYVAVGDLEAANELFERMP--------DRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ + + + E + D ++ +++ ++G + + + F
Sbjct: 251 ATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEE 310
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+ + V+W +MLA + E ++ F+ ++ P+ T +L+AC+H G +
Sbjct: 311 ISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKE 370
Query: 171 GMWVHSFIKSNNIKVDVLLS--TCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMG 227
G + + S+ KV L +C++ + +CG +D A ++ MP N W +++
Sbjct: 371 GKYFFR-VMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGA 429
Query: 228 YGLHGN---GEKALELFLEMEKKGPK 250
+H N G++A + + ++ P+
Sbjct: 430 CRVHRNIDLGKEAAKNLIALDPSDPR 455
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+S+ +H+ + + D + L++ Y+K G A +FDEMP ++ VSWNS++ G
Sbjct: 61 VSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSG 120
Query: 228 YGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWW 274
G + L +F +M+ K N+ TF+ V+SAC EG++
Sbjct: 121 LAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYY 168
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 192/341 (56%), Gaps = 10/341 (2%)
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV----SW 119
Y G +A ++F R R++++WN MI G + A+E F RM ++ +W
Sbjct: 283 YSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSATW 342
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
NS+++ + E K F +M +G A P L S+L+ C L +H +
Sbjct: 343 NSLISGFAQKGVCVEAFKYFSKMQCAGVA-PCLKILTSLLSVCGDSCVLRSAKAIHGYAL 401
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR--NVVSWNSMIMGYGLHGNGEKA 237
+ D L+T L+ Y+KCG + AR VFD+ V+ + WN+MI GYG +G+ E A
Sbjct: 402 RICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTNGDYESA 461
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
E+F EM + +PN ATFV VLSAC+H+G + G +F ++R+ Y ++PK EH+GC+VD
Sbjct: 462 FEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFFRMIRK-YGLDPKPEHFGCVVD 520
Query: 298 LLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIG 357
LL RAG + + +L++ + C ++DS LGE +A +LI++EP +
Sbjct: 521 LLGRAGQLGEARDLVQ--ELAEPPASVFDSLLGACRCYLDSNLGEEMAMKLIDIEPKNPA 578
Query: 358 PYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHL 398
P ++LSN YAA GRW +VER+R +I +KGL K + S++ +
Sbjct: 579 PLVVLSNIYAALGRWSEVERIRGLITDKGLDKNSGISMIEV 619
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 136/274 (49%), Gaps = 7/274 (2%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
LFD + ++N+++ G +NG G A LF ++ ++ + I ++ D++
Sbjct: 93 LFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRPNSVTIVSLLSARDVKNQ 152
Query: 74 NELFERM-------PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALH 126
+ + + + DV ++ + G + + + F + +NVV++N+ ++
Sbjct: 153 SHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGL 212
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD 186
++ +F +M + E PN+ TLVSV++ACA L + +G VH
Sbjct: 213 LQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSMKLEACDH 272
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
V++ T L+ MY KCG A DVF RN+++WNSMI G ++ E+A+ELF M
Sbjct: 273 VMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMVD 332
Query: 247 KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
+G P+ AT+ ++S G+ +E + YF M+
Sbjct: 333 EGILPDSATWNSLISGFAQKGVCVEAFKYFSKMQ 366
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 35/206 (16%)
Query: 60 MIAGYVA-VGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVS 118
+IA Y A A ELF+ MP + ++N ++ G R G A+ F R +
Sbjct: 76 LIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLF-----RQIGF 130
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
WN +R PN T+VS+L+A + S VH
Sbjct: 131 WN------IR---------------------PNSVTIVSLLSA-RDVKNQSHVQQVHCLA 162
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
++ DV +ST L+T Y KCG + + VF+ + V+NVV++N+ + G +G
Sbjct: 163 CKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVF 222
Query: 239 ELFLEMEKK-GPKPNDATFVCVLSAC 263
++F +M KPN T V V+SAC
Sbjct: 223 DVFKDMTMNLEEKPNKVTLVSVVSAC 248
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 132 FWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLST 191
+ E L ++ + S PN T +L AC++L S +H+ + ST
Sbjct: 16 YKEALNLYSHL-HSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGFHSHPHTST 74
Query: 192 CLLTMYV-KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPK 250
L+ Y + A ++FDEMP + ++N+++ G +G +A+ LF ++ +
Sbjct: 75 ALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIR 134
Query: 251 PNDATFVCVLSA 262
PN T V +LSA
Sbjct: 135 PNSVTIVSLLSA 146
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 206/371 (55%), Gaps = 10/371 (2%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
S+L D+ S++D +VKN A+ + ++V WN +I+GY G A +L
Sbjct: 423 SNLNYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKL 482
Query: 77 FERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVR 128
+M + D+V+WN ++ G G + AL NR+ + NVVSW ++++ +
Sbjct: 483 LNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQ 542
Query: 129 AKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVL 188
+ + + LK+F +M ++ PN T+ S+L ACA L G +H F D+
Sbjct: 543 NEKYMDALKIFSQM-QAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIY 601
Query: 189 LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
++T L+ MY + G + +A +VF+++ + + WN M+MGY +H +GE+ + L+ +M ++
Sbjct: 602 VATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERH 661
Query: 249 PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
+P+ TF +LSAC ++G+V EGW YFD M+ YNI P +EHY C+VDLL ++G + +
Sbjct: 662 IRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEA 721
Query: 309 EELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAA 368
I+ + +K C H + +L EI A++L ++EP + Y+++ N Y++
Sbjct: 722 SHFIETMPIK-PDASIWGALLASCKIHKNIKLAEIAARKLFKMEPNNSANYVLMMNLYSS 780
Query: 369 QGRWDDVERVR 379
RW VER++
Sbjct: 781 LNRWVAVERLK 791
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 113/224 (50%), Gaps = 12/224 (5%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPD--RDVVSWNCMI-----DGCVR--VGNVPLALEFF 108
N +I+ Y + A +F+ M D R++ SWN +I DGC+ + + +E
Sbjct: 294 NSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECS 353
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
P ++++WNS+L+ ++ SF L F + G P+ ++ S L A LG
Sbjct: 354 GIKP--DIITWNSILSGYLLRGSFEMVLTSFRSLHSLGFK-PDSCSVTSALQAVIELGFF 410
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
+G +H +I +N+ DV + T L+ MYVK ++ A+ V +NV +WNS+I GY
Sbjct: 411 KLGKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGY 470
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
G +A++L +M ++G P+ T+ ++S + G + E
Sbjct: 471 SFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEA 514
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSF----WECLKMFDEMMESG 146
M+ + G+ A++ F ARN + WNS L +SF +E L +F+EM G
Sbjct: 93 MMRNYLEFGDFLSAIKIFFVGFARNYLLWNSFLE---EFESFGGDPFEILVVFNEMYSKG 149
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
++A VL C L + G+ VH+ + VDV LS L+ Y KC ++D A
Sbjct: 150 VEFDSKA-FTFVLKICLALREFLFGLEVHACLIKKGFHVDVHLSCALINFYGKCWSIDKA 208
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
VF E P + WN+++M + ALELF +M++ K T V +L AC
Sbjct: 209 NQVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKMLQACGKL 268
Query: 267 GMVMEG 272
+ EG
Sbjct: 269 KALNEG 274
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 4/162 (2%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A + F+ P + WN+++ ++R++ + L++F +M + A T V +L AC
Sbjct: 208 ANQVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDM-QRDSAKATVGTTVKMLQACG 266
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP--VRNVVSW 221
L L+ G +H + + + L+ +++MY + LAR VFD M RN+ SW
Sbjct: 267 KLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHSRNLSSW 326
Query: 222 NSMIMGYGLHGNGEKALELFLE-MEKKGPKPNDATFVCVLSA 262
NS+I Y + G AL+ ME G KP+ T+ +LS
Sbjct: 327 NSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSG 368
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 125/318 (39%), Gaps = 78/318 (24%)
Query: 1 MYSVFGRVSDARLLFDS--SLTLDLVSYNSMIDGHVKNGETGAA----RKLFDEMPVR-D 53
MYS R AR +FDS + +L S+NS+I + +G A R + ++ D
Sbjct: 299 MYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPD 358
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERM------PDR------------------------ 83
+ WN +++GY+ G E F + PD
Sbjct: 359 IITWNSILSGYLLRGSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHG 418
Query: 84 ---------DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE 134
DV ++D V+ + A +R +NV +WNS+++ + F E
Sbjct: 419 YIMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGE 478
Query: 135 CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLL 194
+K+ ++M+E G P+ T +++ + G++ + + + IKS+ I
Sbjct: 479 AVKLLNQMVEEG-ITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSSGI----------- 526
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDA 254
NVVSW ++I G + AL++F +M+ + KPN
Sbjct: 527 --------------------TPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNST 566
Query: 255 TFVCVLSACTHAGMVMEG 272
T +L AC ++ +G
Sbjct: 567 TICSLLCACAGPSLLKKG 584
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 191/360 (53%), Gaps = 31/360 (8%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNV 101
A+K+F+E+P+ + N MI + G++E A +FE MP RDVVSW M++G GN
Sbjct: 138 AQKVFEEVPMFCIVASNAMINAFTMNGNMEGALLVFEWMPYRDVVSWTTMVNGFALSGNF 197
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A+ FF M +R K +CL PNEAT VSVL++
Sbjct: 198 GAAIRFFGTM---------------MRHKDVLDCL-----------VKPNEATYVSVLSS 231
Query: 162 CAHL---GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
C L G L G VH +I + + V + T L+ +Y K G ++ + VF M VR V
Sbjct: 232 CTELEGKGALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSASVFRVMVVREV 291
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL 278
+WN+MI +G ++AL+LF +M+ +G KPN TFV VL+AC G V EG F+
Sbjct: 292 CTWNAMISSLASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGFVSEGLELFES 351
Query: 279 MRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDS 338
M + + P +EHYGC+VDLL RAG ++ + E+I+ + C H
Sbjct: 352 MSSKFQVVPVMEHYGCVVDLLGRAGHIQEAAEIIRNMPFP-PDKTVLGAFLGACRIHGAI 410
Query: 339 ELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHL 398
ELGE +AK +++L+ G Y++LS+ YA + RW+ +R I E G+ K A S+VHL
Sbjct: 411 ELGEEIAK-MLKLQTQHCGQYLLLSSMYAEKERWNHAADLRNEIMEAGIHKIPAFSMVHL 469
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 21/232 (9%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
+++ G + A L+F+ D+VS+ +M++G +G GAA + F M +R +C++
Sbjct: 160 FTMNGNMEGALLVFEWMPYRDVVSWTTMVNGFALSGNFGAAIRFFGTM-MRHKDVLDCLV 218
Query: 62 ----AGYVAV----GDLEAANEL-FERM---------PDRDVVSWNCMIDGCVRVGNVPL 103
A YV+V +LE L F R D V +I+ ++G +
Sbjct: 219 KPNEATYVSVLSSCTELEGKGALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNY 278
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
+ F M R V +WN+M++ E L +F++M G PN T V+VLTACA
Sbjct: 279 SASVFRVMVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLK-PNSITFVAVLTACA 337
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLS-TCLLTMYVKCGAMDLARDVFDEMP 214
G +S G+ + + S V V+ C++ + + G + A ++ MP
Sbjct: 338 RGGFVSEGLELFESMSSKFQVVPVMEHYGCVVDLLGRAGHIQEAAEIIRNMP 389
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 238/452 (52%), Gaps = 16/452 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNC 59
+Y G + +A LF D++S+++M+ + NG LF+EM + + NW
Sbjct: 253 LYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVT 312
Query: 60 MIAGYVA---VGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+++ A + +LE ++ E + + ++D ++ + A++ FNRMP
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++V++W + + + E + +F M+ SG P+ LV +LT + LG L +
Sbjct: 373 KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR-PDAIALVKILTTISELGILQQAV 431
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H+F+ N + + + L+ +Y KC +++ A VF M ++VV+W+S+I YG HG
Sbjct: 432 CLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHG 491
Query: 233 NGEKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
GE+AL+LF +M KPN+ TF+ +LSAC+H+G++ EG FD+M Y ++P EH
Sbjct: 492 QGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEH 551
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
Y +VDLL R G + + ++I + ++ C H + ++GE+ AK L L
Sbjct: 552 YAIMVDLLGRMGELDMALDVINNMPMQ-AGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 610
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
+P G YI+LSN Y+ W ++R +++EK L K SVV L++ E + F+
Sbjct: 611 DPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKN-EVRSFIAGDR 669
Query: 412 VHRKR-IMYSMLSELGAHIK---LSPAGSIEK 439
+H + +Y +L++L A ++ P IE+
Sbjct: 670 IHDESDHIYEILTKLHAKMREVAFDPQVQIEE 701
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 41/291 (14%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ +++ID + K G+ A K+F E P DV W +I+GY G E A F RM
Sbjct: 141 DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 200
Query: 82 -----DRDVVSWNCMIDGCVRVGNVPL--------------------------------- 103
D V+ + C ++ N L
Sbjct: 201 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 260
Query: 104 --ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A F M ++++SW++M+A + + + L +F+EM++ PN T+VSVL A
Sbjct: 261 KNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDK-RIKPNWVTVVSVLRA 319
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA + L GM +H + +++ +ST L+ MY+KC + + A D+F+ MP ++V++W
Sbjct: 320 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAW 379
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ GY +G +++ +F M G +P+ V +L+ + G++ +
Sbjct: 380 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 430
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 123/275 (44%), Gaps = 44/275 (16%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-----------PDR------- 83
A KLF E P R V+ WN ++ Y G+ LF +M PD
Sbjct: 55 AHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIAL 114
Query: 84 --------------------------DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
D+ + +ID + G + A++ F P +VV
Sbjct: 115 KSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVV 174
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
W S+++ + ++ S L F M+ S + P+ TLVSV +ACA L +G VH F
Sbjct: 175 LWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+K + + L+ LL +Y K G++ A ++F EM ++++SW++M+ Y +G
Sbjct: 235 VKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDV 294
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
L+LF EM K KPN T V VL AC + EG
Sbjct: 295 LDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 329
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 10/229 (4%)
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME----SGEAVPNE 152
R ++ A + F P R V WN++L + + E L +F +M S E P+
Sbjct: 48 RYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDN 107
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
++ L +CA L KL +G +H F+K I D+ + + L+ +Y KCG M+ A VF E
Sbjct: 108 YSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFME 167
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEM---EKKGPKPNDATFVCVLSACTHAGMV 269
P +VV W S+I GY G+ E AL F M EK P P T V V SAC
Sbjct: 168 YPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDP--VTLVSVASACAQLSNF 225
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
G ++R ++ K+ ++ L + G +KN+ L + +S K
Sbjct: 226 KLGRSVHGFVKR-KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK 273
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 238/452 (52%), Gaps = 16/452 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNC 59
+Y G + +A LF D++S+++M+ + NG LF+EM + + NW
Sbjct: 253 LYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVT 312
Query: 60 MIAGYVA---VGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+++ A + +LE ++ E + + ++D ++ + A++ FNRMP
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++V++W + + + E + +F M+ SG P+ LV +LT + LG L +
Sbjct: 373 KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR-PDAIALVKILTTISELGILQQAV 431
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H+F+ N + + + L+ +Y KC +++ A VF M ++VV+W+S+I YG HG
Sbjct: 432 CLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHG 491
Query: 233 NGEKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
GE+AL+LF +M KPN+ TF+ +LSAC+H+G++ EG FD+M Y ++P EH
Sbjct: 492 QGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEH 551
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
Y +VDLL R G + + ++I + ++ C H + ++GE+ AK L L
Sbjct: 552 YAIMVDLLGRMGELDMALDVINNMPMQ-AGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 610
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
+P G YI+LSN Y+ W ++R +++EK L K SVV L++ E + F+
Sbjct: 611 DPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKN-EVRSFIAGDR 669
Query: 412 VHRKR-IMYSMLSELGAHIK---LSPAGSIEK 439
+H + +Y +L++L A ++ P IE+
Sbjct: 670 IHDESDHIYEILTKLHAKMREVAFDPQVQIEE 701
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 41/291 (14%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ +++ID + K G+ A K+F E P DV W +I+GY G E A F RM
Sbjct: 141 DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 200
Query: 82 -----DRDVVSWNCMIDGCVRVGNVPL--------------------------------- 103
D V+ + C ++ N L
Sbjct: 201 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 260
Query: 104 --ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A F M ++++SW++M+A + + + L +F+EM++ PN T+VSVL A
Sbjct: 261 KNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDK-RIKPNWVTVVSVLRA 319
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA + L GM +H + +++ +ST L+ MY+KC + + A D+F+ MP ++V++W
Sbjct: 320 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAW 379
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ GY +G +++ +F M G +P+ V +L+ + G++ +
Sbjct: 380 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 430
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 123/275 (44%), Gaps = 44/275 (16%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-----------PDR------- 83
A KLF E P R V+ WN ++ Y G+ LF +M PD
Sbjct: 55 AHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIAL 114
Query: 84 --------------------------DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
D+ + +ID + G + A++ F P +VV
Sbjct: 115 KSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVV 174
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
W S+++ + ++ S L F M+ S + P+ TLVSV +ACA L +G VH F
Sbjct: 175 LWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+K + + L+ LL +Y K G++ A ++F EM ++++SW++M+ Y +G
Sbjct: 235 VKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDV 294
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
L+LF EM K KPN T V VL AC + EG
Sbjct: 295 LDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 329
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 10/229 (4%)
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME----SGEAVPNE 152
R ++ A + F P R V WN++L + + E L +F +M S E P+
Sbjct: 48 RYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDN 107
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
++ L +CA L KL +G +H F+K I D+ + + L+ +Y KCG M+ A VF E
Sbjct: 108 YSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFME 167
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEM---EKKGPKPNDATFVCVLSACTHAGMV 269
P +VV W S+I GY G+ E AL F M EK P P T V V SAC
Sbjct: 168 YPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDP--VTLVSVASACAQLSNF 225
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
G ++R ++ K+ ++ L + G +KN+ L + +S K
Sbjct: 226 KLGRSVHGFVKR-KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK 273
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 238/452 (52%), Gaps = 16/452 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNC 59
+Y G + +A LF D++S+++M+ + NG LF+EM + + NW
Sbjct: 223 LYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVT 282
Query: 60 MIAGYVA---VGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+++ A + +LE ++ E + + ++D ++ + A++ FNRMP
Sbjct: 283 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 342
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++V++W + + + E + +F M+ SG P+ LV +LT + LG L +
Sbjct: 343 KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR-PDAIALVKILTTISELGILQQAV 401
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H+F+ N + + + L+ +Y KC +++ A VF M ++VV+W+S+I YG HG
Sbjct: 402 CLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHG 461
Query: 233 NGEKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
GE+AL+LF +M KPN+ TF+ +LSAC+H+G++ EG FD+M Y ++P EH
Sbjct: 462 QGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEH 521
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
Y +VDLL R G + + ++I + ++ C H + ++GE+ AK L L
Sbjct: 522 YAIMVDLLGRMGELDMALDVINNMPMQ-AGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 580
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
+P G YI+LSN Y+ W ++R +++EK L K SVV L++ E + F+
Sbjct: 581 DPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKN-EVRSFIAGDR 639
Query: 412 VHRKR-IMYSMLSELGAHIK---LSPAGSIEK 439
+H + +Y +L++L A ++ P IE+
Sbjct: 640 IHDESDHIYEILTKLHAKMREVAFDPQVQIEE 671
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 41/291 (14%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ +++ID + K G+ A K+F E P DV W +I+GY G E A F RM
Sbjct: 111 DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 170
Query: 82 -----DRDVVSWNCMIDGCVRVGNVPL--------------------------------- 103
D V+ + C ++ N L
Sbjct: 171 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 230
Query: 104 --ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A F M ++++SW++M+A + + + L +F+EM++ PN T+VSVL A
Sbjct: 231 KNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDK-RIKPNWVTVVSVLRA 289
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA + L GM +H + +++ +ST L+ MY+KC + + A D+F+ MP ++V++W
Sbjct: 290 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAW 349
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ GY +G +++ +F M G +P+ V +L+ + G++ +
Sbjct: 350 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 400
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 25 SYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM---- 80
S++ +I ++ A KLF E P R V+ WN ++ Y G+ LF +M
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 81 -------PDR---------------------------------DVVSWNCMIDGCVRVGN 100
PD D+ + +ID + G
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQ 127
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
+ A++ F P +VV W S+++ + ++ S L F M+ S + P+ TLVSV +
Sbjct: 128 MNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVAS 187
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
ACA L +G VH F+K + + L+ LL +Y K G++ A ++F EM ++++S
Sbjct: 188 ACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIIS 247
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
W++M+ Y +G L+LF EM K KPN T V VL AC + EG
Sbjct: 248 WSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 299
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 115/239 (48%), Gaps = 10/239 (4%)
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME-- 144
S++ +I ++ ++ A + F P R V WN++L + + E L +F +M
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 145 --SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
S E P+ ++ L +CA L KL +G +H F+K I D+ + + L+ +Y KCG
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQ 127
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM---EKKGPKPNDATFVCV 259
M+ A VF E P +VV W S+I GY G+ E AL F M EK P P T V V
Sbjct: 128 MNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDP--VTLVSV 185
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
SAC G ++R ++ K+ ++ L + G +KN+ L + +S K
Sbjct: 186 ASACAQLSNFKLGRSVHGFVKR-KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK 243
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 238/452 (52%), Gaps = 16/452 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNC 59
+Y G + +A LF D++S+++M+ + NG LF+EM + + NW
Sbjct: 223 LYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVT 282
Query: 60 MIAGYVA---VGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+++ A + +LE ++ E + + ++D ++ + A++ FNRMP
Sbjct: 283 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 342
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++V++W + + + E + +F M+ SG P+ LV +LT + LG L +
Sbjct: 343 KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR-PDAIALVKILTTISELGILQQAV 401
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H+F+ N + + + L+ +Y KC +++ A VF M ++VV+W+S+I YG HG
Sbjct: 402 CLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHG 461
Query: 233 NGEKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
GE+AL+LF +M KPN+ TF+ +LSAC+H+G++ EG FD+M Y ++P EH
Sbjct: 462 QGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEH 521
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
Y +VDLL R G + + ++I + ++ C H + ++GE+ AK L L
Sbjct: 522 YAIMVDLLGRMGELDMALDVINNMPMQ-AGPDIWGALLGACRIHQNIKMGEVAAKNLFSL 580
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
+P G YI+LSN Y+ W ++R +++EK L K SVV L++ E + F+
Sbjct: 581 DPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKN-EVRSFIAGDR 639
Query: 412 VHRKR-IMYSMLSELGAHIK---LSPAGSIEK 439
+H + +Y +L++L A ++ P IE+
Sbjct: 640 IHDESDHIYEILTKLHAKMREVAFDPQVQIEE 671
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 135/291 (46%), Gaps = 41/291 (14%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ +++ID + K G+ A K+F E P DV W +I+GY G E A F RM
Sbjct: 111 DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 170
Query: 82 -----DRDVVSWNCMIDGCVRVGNVPL--------------------------------- 103
D V+ + C ++ N L
Sbjct: 171 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 230
Query: 104 --ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A F M ++++SW++M+A + + + L +F+EM++ PN T+VSVL A
Sbjct: 231 KNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDK-RIKPNWVTVVSVLRA 289
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA + L GM +H + +++ +ST L+ MY+KC + + A D+F+ MP ++V++W
Sbjct: 290 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAW 349
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ GY +G +++ +F M G +P+ V +L+ + G++ +
Sbjct: 350 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 400
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 44/292 (15%)
Query: 25 SYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM---- 80
S++ +I ++ A KLF E P R V+ WN ++ Y G+ LF +M
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 81 -------PDR---------------------------------DVVSWNCMIDGCVRVGN 100
PD D+ + +ID + G
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQ 127
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
+ A++ F P +VV W S+++ + ++ S L F M+ S + P+ TLVSV +
Sbjct: 128 MNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVAS 187
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
ACA L +G VH F+K + + L+ LL +Y K G++ A ++F EM ++++S
Sbjct: 188 ACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIIS 247
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
W++M+ Y +G L+LF EM K KPN T V VL AC + EG
Sbjct: 248 WSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG 299
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 115/239 (48%), Gaps = 10/239 (4%)
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME-- 144
S++ +I ++ ++ A + F P R V WN++L + + E L +F +M
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 145 --SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
S E P+ ++ L +CA L KL +G +H F+K I D+ + + L+ +Y KCG
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQ 127
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM---EKKGPKPNDATFVCV 259
M+ A VF E P +VV W S+I GY G+ E AL F M EK P P T V V
Sbjct: 128 MNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDP--VTLVSV 185
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
SAC G ++R ++ K+ ++ L + G +KN+ L + +S K
Sbjct: 186 ASACAQLSNFKLGRSVHGFVKR-KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK 243
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 223/404 (55%), Gaps = 10/404 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNC 59
MYS G + ++ +F ++ D VS+ SMI G V++G A +LF EM ++V +
Sbjct: 480 MYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHIT 539
Query: 60 MIAGYVAVGDL-------EAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+I+ A DL E F + V +++ + G++ LA + F+ +P
Sbjct: 540 LISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILP 599
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++ + +S+++ + + E +F +M+ + E V + T+ S+L A + L + +G
Sbjct: 600 HKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETV-DAFTITSILGAASLLCQSDIGT 658
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H++I+ ++ DV + + LLTMY KCG+++ R FD++ +++ W S+I+ Y HG
Sbjct: 659 QLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVEKPDLIGWTSLILSYAQHG 718
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G AL + M+ +G +P+ TFV +LSAC+H+G+V E ++Y + M Y I P HY
Sbjct: 719 KGADALAAYELMKSEGVEPDAVTFVGILSACSHSGLVEEAFFYLNSMIEDYKITPSHRHY 778
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
CIVD+L R+G ++ +E I + V+ C H D ELG++ A++++ LE
Sbjct: 779 ACIVDILGRSGRLREAESFINNMPVE-PNALIWGTLLAACKVHGDFELGKLAAEKVMGLE 837
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
P D+G Y+ SN A +W++V ++R + + G++KE A SVV
Sbjct: 838 PSDVGAYVSFSNICADGEQWEEVTKIRSSLNKTGMKKEPAWSVV 881
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 44/343 (12%)
Query: 7 RVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVA 66
++ A LL L + +S+I + K+ + A KLFD + + +WN MI+GYV
Sbjct: 54 KILHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVR 113
Query: 67 VGDLEAANELFERMP----DRDVVSWNCMIDGCVRVG----------------------- 99
+ E+F RM + D S+ ++ CV +
Sbjct: 114 NSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYV 173
Query: 100 ------------NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGE 147
N AL FFN NV SWN++++L V+ L +F EM +
Sbjct: 174 QTQMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRA-S 232
Query: 148 AVPNEATLVSVLTACAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
+PN T S+LTAC L ++ +G VH IK DV + T ++ +Y K G M A
Sbjct: 233 LMPNSYTFPSILTACCALKEMQIGKGVHGLAIKCG--ATDVFVETAIVDLYAKFGCMSEA 290
Query: 207 RDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
F +M V+NVVSW ++I G+ + AL+LF +M + G + N T VLSAC
Sbjct: 291 YRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKP 350
Query: 267 GMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSE 309
++ E L+ ++ + V+ +V++ A+ G V SE
Sbjct: 351 ELIEEAKQIHSLVLKL-GLILNVKVGAALVNMYAKIGGVGLSE 392
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 128/253 (50%), Gaps = 9/253 (3%)
Query: 9 SDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWNWNCMIAGY 64
S+A F+ + ++ S+N++I VKNGE A LF EM + + + + ++
Sbjct: 188 SEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTAC 247
Query: 65 VAVGDLE---AANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
A+ +++ + L + DV ++D + G + A F++M +NVVSW +
Sbjct: 248 CALKEMQIGKGVHGLAIKCGATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTA 307
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
+++ V+ LK+F +M + G + N T+ SVL+ACA + +HS +
Sbjct: 308 IISGFVQQDDTTFALKLFKDMRQIGHEI-NAYTVTSVLSACAKPELIEEAKQIHSLVLKL 366
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP-VRNVVSWNSMIMGYGLHGNGEKALEL 240
+ ++V + L+ MY K G + L+ F EM +++ W SM+ + + N +ALEL
Sbjct: 367 GLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFAQNRNSGRALEL 426
Query: 241 FLEMEKKGPKPND 253
F M ++G KP++
Sbjct: 427 FTVMLREGVKPDE 439
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 160/352 (45%), Gaps = 53/352 (15%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y+ FG +S+A F ++VS+ ++I G V+ +T A KLF +M R + +
Sbjct: 280 LYAKFGCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDM--RQIGHE--- 334
Query: 61 IAGYVAVGDLEAAN--ELFERMPD-----------RDVVSWNCMIDGCVRVGNVPLALEF 107
I Y L A EL E +V +++ ++G V L+
Sbjct: 335 INAYTVTSVLSACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELA 394
Query: 108 FNRMP-ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+ M ++ W SML+ + ++ L++F M+ G P+E + S+L+ +
Sbjct: 395 FSEMKNMKDPGIWASMLSSFAQNRNSGRALELFTVMLREG-VKPDEYCIGSLLSI---MS 450
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
LS+G VHS+I + + + L TMY KCG ++ + +VF + V++ VSW SMI
Sbjct: 451 SLSLGSQVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMIS 510
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT-----HAGMVMEGWWY------ 275
G+ HG ++AL LF EM + P+ T + +L+AC G + G +
Sbjct: 511 GFVEHGYPDQALRLFKEMLYQEVVPDHITLISILTACADLRLLRTGREIHGSTFRLGLGT 570
Query: 276 -----------------FDLMRRVYNIEPKVEHYGC--IVDLLARAGLVKNS 308
L R+V++I P + + C +V A+ GL++ S
Sbjct: 571 NTVVGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGLIEES 622
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 243/473 (51%), Gaps = 45/473 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----------- 49
M+ GR A LFD D++S+NS+I G+ G A + F +M
Sbjct: 217 MHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKF 276
Query: 50 ------------------------PVR---DVWN--WNCMIAGYVAVGDLEAANELFE-- 78
VR D+ N +I+ Y G +E A + E
Sbjct: 277 TLGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGAVEVARTIVELR 336
Query: 79 RMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKM 138
+ +V+++ +++G V++G+V A E F+ + R+VV+W +M+ + + + L++
Sbjct: 337 GTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALEL 396
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F M+ G PN TL +VL+ + L L G +H+ V + L+TMY
Sbjct: 397 FRLMISEGPR-PNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALITMYS 455
Query: 199 KCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
K G + AR VF+++ R+ ++W SMI+ HG G +A+ELF +M K KP+ T+V
Sbjct: 456 KSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYV 515
Query: 258 CVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSV 317
VLSACTH G+V +G YF+LM+ V++IEP HY C++DL RAGL++ + IK + +
Sbjct: 516 GVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYACMIDLFGRAGLIEEAYNFIKTMPI 575
Query: 318 KXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVER 377
+ C H + +L ++ A++L+ ++P + G Y L+NT++A G W++ +
Sbjct: 576 E-PDGIAWGSLLSACRVHKNVDLAKVAAEKLLLIDPNNSGAYSALANTHSACGEWEEAAK 634
Query: 378 VRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
VR ++R++ ++KE S V +++ + V++ ++ +Y M+S++ IK
Sbjct: 635 VRKLMRDREVKKEQGFSWVQIQNKVHIFGVEDALHPQRDAIYRMISKIWKEIK 687
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 150/322 (46%), Gaps = 65/322 (20%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
NS+++ +VK+G++ + +FD M +RD WN MI+ ++ G + A LF++M DRD++
Sbjct: 181 NSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDII 240
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
SWN +I G G ALE F +M S
Sbjct: 241 SWNSIIAGYCHQGYDSKALE-------------------------------TFSDMFRSS 269
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL- 205
P++ TL SVL+ACA+L L +G +H++I +I + + L++MY K GA+++
Sbjct: 270 SLKPDKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGAVEVA 329
Query: 206 --------------------------------ARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
AR++FD + R+VV+W +MI+GY +
Sbjct: 330 RTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSL 389
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
+ ALELF M +GP+PN T VLS + + G + R+ + V
Sbjct: 390 LKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVS-SVSVGN 448
Query: 294 CIVDLLARAGLVKNSEELIKYV 315
++ + +++G +K++ ++ +
Sbjct: 449 ALITMYSKSGCIKDARKVFNQI 470
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 133/295 (45%), Gaps = 65/295 (22%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIA 62
+V GR AR++ L L + N++++ + K A +LF EMP R ++WN +++
Sbjct: 26 TVTGRFIHARII-KHGLHLSVFLMNNLLNFYSKTASFNDAHRLFSEMPQRTTFSWNTLLS 84
Query: 63 GYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
Y G++E A LF+ +P+ D VSW MI G +N+M N
Sbjct: 85 SYAKGGNIETARRLFDDIPEPDSVSWTTMIVG-------------YNQMGRFNT------ 125
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
A+H F +M+ G +P + T +VL +C G L +G VHSF+
Sbjct: 126 -AIHT-----------FQQMISDG-ILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLG 172
Query: 183 IKVDVLLSTCLLTMYVK-------------------------------CGAMDLARDVFD 211
+ V ++ LL MYVK G D+A +FD
Sbjct: 173 LSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFD 232
Query: 212 EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLSACTH 265
+M R+++SWNS+I GY G KALE F +M + KP+ T VLSAC +
Sbjct: 233 QMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACAN 287
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 4/131 (3%)
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
P T V +L + G ++H+ I + + + V L LL Y K + + A
Sbjct: 7 TPKSDTFVYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHR 66
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
+F EMP R SWN+++ Y GN E A LF ++ P+P+ ++ ++ G
Sbjct: 67 LFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDI----PEPDSVSWTTMIVGYNQMGR 122
Query: 269 VMEGWWYFDLM 279
F M
Sbjct: 123 FNTAIHTFQQM 133
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 227/457 (49%), Gaps = 41/457 (8%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+F + D+ +++ + K G A K+FD+M V++V +W MI G + G
Sbjct: 129 LVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFRE 188
Query: 73 ANELFERM------PD---------------------------------RDVVSWNCMID 93
A +LF + PD R+V ++D
Sbjct: 189 AVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVD 248
Query: 94 GCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
+ G++ A F+ M +++V W++M+ + E +++F EM + P+
Sbjct: 249 MYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKV-NVRPDCY 307
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
+V L++CA LG L +G W + + +L T L+ Y KCG+M+ A V+ M
Sbjct: 308 AMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMM 367
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW 273
++ V +N++I G ++G A +F +M K G PN+ TFV +L CTHAG+V +G
Sbjct: 368 KEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGR 427
Query: 274 WYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCT 333
YF+ M +++ P +EHYGC+VDLLARAG + + LIK + +K C
Sbjct: 428 HYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMK-ANVIVWGSLLGGCR 486
Query: 334 THMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAAS 393
H +++L E V K+LIELEP + G Y++LSN Y+A RWD+ E++R + EKG+QK
Sbjct: 487 LHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGY 546
Query: 394 SVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
S V ++ ++ V + S + +Y L L +K
Sbjct: 547 SWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLK 583
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 3/205 (1%)
Query: 100 NVPLALEFFNRMPAR-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
N + F++ P N +N+M+ V F + ++ M ++ VP+ T V
Sbjct: 52 NAQYPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAA-IVPDSFTFSFV 110
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L ACA L +G+ +HS + DV + T ++ Y KCG + A VFD+M V+NV
Sbjct: 111 LKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNV 170
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL 278
VSW MI G G +A++LF + + G +P+ V VL AC G + G W
Sbjct: 171 VSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRC 230
Query: 279 MRRVYNIEPKVEHYGCIVDLLARAG 303
MR + V +VD+ + G
Sbjct: 231 MREC-GLSRNVFVATSLVDMYTKCG 254
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 14/258 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---PVR-DVWN 56
MY+ G + +AR +FD + D+V +++MI G+ NG A +LF EM VR D +
Sbjct: 249 MYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYA 308
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVS----WNCMIDGCVRVGNVPLALEFFNRMP 112
++ ++G LE N M + +S +ID + G++ AL + M
Sbjct: 309 MVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMK 368
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG- 171
++ V +N++++ +F +M + G PNE T V +L C H G + G
Sbjct: 369 EKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFG-IPPNEHTFVGLLCGCTHAGLVDDGR 427
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGL 230
+ +S ++ + C++ + + G +D A ++ MP++ NV+ W S++ G L
Sbjct: 428 HYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRL 487
Query: 231 HGN---GEKALELFLEME 245
H E L+ +E+E
Sbjct: 488 HRETQLAEHVLKQLIELE 505
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 203/356 (57%), Gaps = 15/356 (4%)
Query: 69 DLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARN--VVSWNSMLALH 126
D+ +A +LF+ V N MI V+VG+V A + F+ M R+ V SW +M++ +
Sbjct: 161 DVCSARKLFDEFGGNGCV-LNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGY 219
Query: 127 VRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD 186
+A + E +K+F M + P+E +++VL+ACA LG L +G W+H++I+ + +
Sbjct: 220 TQAHNPNEAIKLFRRM-QLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSKI 278
Query: 187 VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
V L L+ MY K G + A ++F+ M + +++W +MI G LHG G++AL +F MEK
Sbjct: 279 VPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEK 338
Query: 247 KGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
+ KPN+ TF+ +LSAC+H G+V G YF MR Y IEPK+EHYGC++DLL RAG +
Sbjct: 339 EDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHL 398
Query: 306 KNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNT 365
+ ++E++ + + T D+EL E + L LEP G Y +LSNT
Sbjct: 399 QEAKEMVLRMPFEANAAIWGSLLAAS-TRCGDAELAEEALRHLTVLEPGHCGNYSLLSNT 457
Query: 366 YAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE---------DFESKYFVKNYSV 412
YA+ GRW++ VR ++++ G++K S + + D S YFV Y V
Sbjct: 458 YASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIVYEFIAGDKLSIYFVDIYDV 513
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 51/285 (17%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR--DVWNWN 58
MYS + V AR LFD + N+MI +VK G+ ARKLFD M R DV++W
Sbjct: 156 MYSCYD-VCSARKLFDE-FGGNGCVLNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWT 213
Query: 59 CMIAGYVAVGDLEAANELFERM------PD------------------------------ 82
MI+GY + A +LF RM PD
Sbjct: 214 AMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKH 273
Query: 83 ---RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECL 136
+ V +N +ID + GN+ ALE F M + +++W +M LALH K E L
Sbjct: 274 KLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGK---EAL 330
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLT 195
++F M + PNE T +++L+AC+H+G + +G + ++S I+ + C++
Sbjct: 331 RVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMID 390
Query: 196 MYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKALE 239
+ + G + A+++ MP N W S++ G+ E A E
Sbjct: 391 LLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEE 435
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 210/378 (55%), Gaps = 25/378 (6%)
Query: 69 DLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM-------PAR-NVVSWN 120
DL A+++F + ++ +VSWN +I G A E F ++ P R NV+SW+
Sbjct: 313 DLGDAHKIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWS 372
Query: 121 SMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS 180
++++ + L++F +M + + + N T+ SVL+ CA L L++G +H++
Sbjct: 373 AVISGFASKGRLEKSLELFRQM-QLAKVMANCVTISSVLSVCAELAALNLGRELHAYAIR 431
Query: 181 NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALEL 240
N + ++L+ L+ MY+KCG + A VFD + R+++SWNS+I GYG+HG GE A+
Sbjct: 432 NLMDDNILVGNGLVNMYMKCGVFEEAHLVFDNIKGRDLISWNSLIGGYGMHGLGENAVRT 491
Query: 241 FLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLA 300
F EM G +P+ TFV VLSAC+HAG+V G FD M ++IEP VEHY C+VDLL
Sbjct: 492 FDEMINAGLRPDKITFVAVLSACSHAGLVAAGRNLFDRMVTEFSIEPTVEHYACMVDLLG 551
Query: 301 RAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYI 360
RAGL++ + ++++ + ++ C + D++L E + R++ L+ G ++
Sbjct: 552 RAGLLQEAHDIVRNMPIE-PNECVWGALLNSCRMYRDTDLIEEIESRILALKSEITGSFM 610
Query: 361 MLSNTYAAQGRWDDVERVRVMIREKGLQK---------------EAASSVVHLEDFESKY 405
+LSN YA G+ +D RVRV +EKG +K +A +VVHLE E
Sbjct: 611 LLSNIYADSGKREDSARVRVSAKEKGFKKIPGQSWIEVRKKVYTFSAGNVVHLEQDEIFA 670
Query: 406 FVKNYSVHRKRIMYSMLS 423
+ ++ + YS+ S
Sbjct: 671 ILNELALQMASVHYSINS 688
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 145/330 (43%), Gaps = 53/330 (16%)
Query: 2 YSVFGRVSDARLLFDSSL--TLDLVSYNSMIDGHVKNGETGAARKLFDEM---------- 49
YS F +S+AR +F ++ +L + +NS+I +V +G A K++ +M
Sbjct: 68 YSRFNSISEARKIFTTTPFESLSNLVWNSIIRANVSHGYYNYAVKIYHQMMKFGFLPDGF 127
Query: 50 --PV---------------------------RDVWNWNCMIAGYVAVGDLEAANELFERM 80
P+ V N ++ Y V +E A ++F+ M
Sbjct: 128 TLPLIIKSCSKIGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGM 187
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLALHVRAKSFWECL 136
R V+SWN ++ G + A F RM N V+W S+L+ H R F E +
Sbjct: 188 VVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDETM 247
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTM 196
++F M G + EA V VL+ CA + + G +H F+ + + + L+ +
Sbjct: 248 ELFKVMRIKGIEISGEAVAV-VLSVCADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGI 306
Query: 197 YVKCGAMDL--ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP----K 250
Y K DL A +F ++ +++VSWN++I Y G + A E+FL++EK +
Sbjct: 307 YGK-KREDLGDAHKIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSPVR 365
Query: 251 PNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
PN ++ V+S G + + F M+
Sbjct: 366 PNVISWSAVISGFASKGRLEKSLELFRQMQ 395
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 4/221 (1%)
Query: 97 RVGNVPLALEFFNRMPARNV--VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
R ++ A + F P ++ + WNS++ +V + +K++ +MM+ G +P+ T
Sbjct: 70 RFNSISEARKIFTTTPFESLSNLVWNSIIRANVSHGYYNYAVKIYHQMMKFG-FLPDGFT 128
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
L ++ +C+ +G + + VH + K V + L+ MY K M+ A VFD M
Sbjct: 129 LPLIIKSCSKIGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGMV 188
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
VR+V+SWN+++ GY + + A +F ME +G +PN T+ +LS+ G+ E
Sbjct: 189 VRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDETME 248
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
F +M R+ IE E ++ + A V+ +E+ +V
Sbjct: 249 LFKVM-RIKGIEISGEAVAVVLSVCADMDGVQRGKEIHGFV 288
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/407 (31%), Positives = 221/407 (54%), Gaps = 13/407 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ FG++ +AR +FD +VS+ +++ G+VK G + A KLF+EM +++ + +
Sbjct: 160 MYAQFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNI-GLDFI 218
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNC---------MIDGCVRVGNVPLALEFFNRM 111
+ + G ++ +L V+ C ++ R GN+ A F+ +
Sbjct: 219 VFVNLVSGCIQLREQLLASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLI 278
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
++V+SW SM+A + ++ E L +F M+ + E PN ATL +VL+ACA LG L +G
Sbjct: 279 VRKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMT-EIKPNRATLATVLSACADLGSLCIG 337
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
+ + N + D+ + T L+ MY KCG ++ AR+VF+ + +++ W+SMI YG+H
Sbjct: 338 EEIEQYAFENGFETDLQVQTSLVHMYSKCGNINKAREVFERVENKDLTLWSSMINSYGIH 397
Query: 232 GNGEKALELFLEMEK-KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
G G +A+ LF +M + KP+ + +L AC+H+G++ +G YF M+ + I P E
Sbjct: 398 GMGNEAISLFEKMTTAERIKPDAIVYTSLLFACSHSGLIEDGLKYFKSMQTDFGITPTKE 457
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HY C+VDLLAR G + + + I+ + C H + ELGE+VA +L++
Sbjct: 458 HYTCLVDLLARVGQLDLALDTIEAMPTD-VQAEALSPLLSACRIHGNIELGELVAAKLLD 516
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVH 397
+ P Y+ ++N Y + G+W + +R MI KG+ KE S V
Sbjct: 517 VSPKSSSSYVGVANLYNSVGKWKEANTMRNMIDGKGMVKECGWSQVQ 563
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 135/287 (47%), Gaps = 18/287 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
MYS + AR +FD +VS+NS+I + A L EM V
Sbjct: 54 MYSKCSVIESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSST 113
Query: 57 WNCMIAGYVAVGDLEAANELFERMP------DRDVVSWNCMIDGCV-----RVGNVPLAL 105
+ +++GY + +L + L++ M +V + +D + + G + A
Sbjct: 114 FVSILSGYSS--NLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEAR 171
Query: 106 EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
+ F+ M + +VSW +++ +V+ S E +K+F+EM + + V++++ C L
Sbjct: 172 KVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGL-DFIVFVNLVSGCIQL 230
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
+ + VHS + + + LLTMY +CG + AR +FD + ++V+SW SMI
Sbjct: 231 REQLLASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMI 290
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
GY ++AL+LF M KPN AT VLSAC G + G
Sbjct: 291 AGYAHSRRPKEALDLFRRMVMTEIKPNRATLATVLSACADLGSLCIG 337
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 6/185 (3%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
D ++D + + A + F+ MP R+VVSWNS+++ + + L + EM+
Sbjct: 44 DTFVQTSLVDMYSKCSVIESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEML 103
Query: 144 ESGEAVPNEATLVSVLTA-CAHLGKLSV---GMWVHSF-IKSNNIKVDVLLSTCLLTMYV 198
G P+ +T VS+L+ ++L GM +H F IK + +V L L+ MY
Sbjct: 104 VLGFK-PSSSTFVSILSGYSSNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYA 162
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
+ G MD AR VFD M + +VSW +++ GY G+ +A++LF EM+ + + FV
Sbjct: 163 QFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVN 222
Query: 259 VLSAC 263
++S C
Sbjct: 223 LVSGC 227
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 62/112 (55%)
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
N T + +CA+L + G +H + + D + T L+ MY KC ++ AR VF
Sbjct: 9 NTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVF 68
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
DEMP R+VVSWNS+I Y EKAL L EM G KP+ +TFV +LS
Sbjct: 69 DEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSG 120
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 215/418 (51%), Gaps = 42/418 (10%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ NS+ID + K+G + A +F++M R++ +WN M+A + AA EL +M
Sbjct: 372 DIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQ 431
Query: 82 ----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP------------------------- 112
+ + V++ ++ C R+G + + E R+
Sbjct: 432 AHGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGHLS 491
Query: 113 -ARNV--------VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
ARNV VS+N ++ + + + E L +F EM SG P+ + + +++ACA
Sbjct: 492 LARNVFNVSIKDKVSYNILIIGYSQTTNSSESLNLFSEMRLSG-MTPDIVSFIGIISACA 550
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
HL + G +H + + + LL +Y KCG +DLA VFD + ++V SWN+
Sbjct: 551 HLSSIKQGKEIHGHLVRKLFHTHLFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNT 610
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDA-TFVCVLSACTHAGMVMEGWWYFDLMRRV 282
MI+GYG+ G E A+ LF M++ G D+ +++ VLSAC+H G++ +G YF M+
Sbjct: 611 MILGYGMRGEFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQD- 669
Query: 283 YNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGE 342
YNIEP HY C+VDLL RAG ++ + LI+ +S + C + + ELG
Sbjct: 670 YNIEPTHTHYACMVDLLGRAGQIEEAANLIRGLSFE-PDANIWGALLGACRIYGNVELGH 728
Query: 343 IVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
A+ L +L+P G YI+LSN YA GRWD+ VR +++ +G +K S V + D
Sbjct: 729 WAAEHLFKLKPDHCGYYILLSNMYAEAGRWDEANMVRELMKSRGAKKNPGCSWVQIGD 786
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 41/285 (14%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPD---- 82
N+++D + K G A +K+FDEM R+ +WN +I G+ G A + F M +
Sbjct: 276 NALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMR 335
Query: 83 -----------------------------------RDVVSWNCMIDGCVRVGNVPLALEF 107
D+ N +ID + G+ +A
Sbjct: 336 PNPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTI 395
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
FN+M RN+VSWNSM+A + + + +++ +M GE PN T +VL ACA LG
Sbjct: 396 FNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGEN-PNNVTFTNVLPACARLGF 454
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L+VG +H+ I D+ LS L MY KCG + LAR+VF+ + +++ VS+N +I+G
Sbjct: 455 LNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGHLSLARNVFN-VSIKDKVSYNILIIG 513
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
Y N ++L LF EM G P+ +F+ ++SAC H + +G
Sbjct: 514 YSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQG 558
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 131/306 (42%), Gaps = 54/306 (17%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM--------PDR-DVVS----- 87
A +FDEM RD +WN +I G E + F+ M PD VVS
Sbjct: 188 AMNVFDEMFERDKVSWNTVIGLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVC 247
Query: 88 ----------------WNCMIDGCVRVGNVPLAL-----------EFFNRMPARNVVSWN 120
+ + G V+VGN + + + F+ M RN VSWN
Sbjct: 248 ADSENVVMARIVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKVFDEMDERNEVSWN 307
Query: 121 SML-ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
+++ R S + L F M+ +G PN T+ S+L LG +GM VH +
Sbjct: 308 AVITGFSFRGLSM-DALDAFRSMINTGMR-PNPVTISSMLPVLGELGLFKLGMEVHGYSL 365
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
I+ D+ + L+ MY K G+ +A +F++M RN+VSWNSM+ + + + A+E
Sbjct: 366 RMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVE 425
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
L +M+ G PN+ TF VL AC G + G I ++ GC DL
Sbjct: 426 LLRQMQAHGENPNNVTFTNVLPACARLGFLNVG----------KEIHARIIQTGCATDLF 475
Query: 300 ARAGLV 305
L
Sbjct: 476 LSNALT 481
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 71 EAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAK 130
E +F+ D+DV N ++ G A+ F+ M R+ VSWN+++ L
Sbjct: 155 EVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRG 214
Query: 131 SFWECLKMFDEMMESGEAV-PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
E L F EM+ + V P+ T+VSVL CA + + VH ++ + V +
Sbjct: 215 FHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLSGHVKV 274
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
L+ +Y KCG+ + + VFDEM RN VSWN++I G+ G AL+ F M G
Sbjct: 275 GNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGM 334
Query: 250 KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
+PN T +L G+ G R+ IE + ++D+ A++G
Sbjct: 335 RPNPVTISSMLPVLGELGLFKLGMEVHGYSLRM-GIESDIFIGNSLIDMYAKSG 387
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 107 FFNRMP-ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
F N +P ++ WN+++ + A F++ +++ M+ SG P++ T VL AC+
Sbjct: 90 FQNTLPFSKTAFLWNTLIRAYSIA-GFFDGFGVYNTMVRSG-VKPDDHTYPFVLKACSDY 147
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
K G VH + DV + LL Y CG A +VFDEM R+ VSWN++I
Sbjct: 148 LKFDKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVI 207
Query: 226 MGYGLHGNGEKALELFLEMEKKGP--KPNDATFVCVLSACT 264
G E++L F EM P +P+ T V VL C
Sbjct: 208 GLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCA 248
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 209/389 (53%), Gaps = 25/389 (6%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC-----M 60
GR+ AR LFD ++VS+++MIDG+++ G F EM V N M
Sbjct: 118 GRIGYARKLFDRMPERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIM 177
Query: 61 IAGYVAVGDL------------------EAANELFERMPDRDVVSWNCMIDGCVRVGNVP 102
I G G + +AA E+FERMP++D++SW MI V G +
Sbjct: 178 IKGCGNCGGVKDGMQIHGLVSRLGFEFVDAAYEVFERMPEKDLISWTAMIRRFVTDGRMG 237
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
+E F+ + ++ W +++ V + + E L + M G PN T+ SVL A
Sbjct: 238 KPVELFDTLKEKDDFVWTVLISGFVSNEEYEEALCWYVRMNREG-CKPNPLTISSVLAAS 296
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
A L L+ G+ +HS + N++ D+ + L++ Y KCG + A +F ++ NVVS N
Sbjct: 297 ASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVELNVVSNN 356
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
S+I G+ +G GE+AL ++ M+ + +PN TF+ VLSACTHAG++ EG FD M+
Sbjct: 357 SVINGFTQNGFGEEALNMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGRNLFDTMKSR 416
Query: 283 YNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGE 342
Y EP +HY C+VDLL RAGL+ + +LI+ ++VK + H+ +L +
Sbjct: 417 YRNEPDADHYACMVDLLGRAGLLDEANDLIRSITVK-PHSGVWGALLAASSAHLRLDLAK 475
Query: 343 IVAKRLIELEPMDIGPYIMLSNTYAAQGR 371
+ A+ + +LEP + PY++LSN Y+A G+
Sbjct: 476 LAAQHITKLEPANATPYVVLSNLYSAAGQ 504
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 160/331 (48%), Gaps = 20/331 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHV-KNGETGAARKLFDEMP--VRDVWNW 57
+Y+ G++ +AR LFD +YN+MI G++ K + A +L+ E+P RD
Sbjct: 15 VYAKNGQIINARKLFDKMPERTTATYNAMISGYILKARKFHLAEELYREVPCEFRDPVCS 74
Query: 58 NCMIAGYVAVGDLEAANELFERMPD--RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARN 115
N ++ GY+ +G+ A +FE + + RDVVSW+ ++ G R G + A + F+RMP RN
Sbjct: 75 NALMNGYLKIGETNEALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYARKLFDRMPERN 134
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
VVSW++M+ ++ F F EM G N T+ ++ C + G + GM +H
Sbjct: 135 VVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKDGMQIH 194
Query: 176 SFIKSNNIKV--------------DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
+ + D++ T ++ +V G M ++FD + ++ W
Sbjct: 195 GLVSRLGFEFVDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDTLKEKDDFVW 254
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
+I G+ + E+AL ++ M ++G KPN T VL+A + EG + +
Sbjct: 255 TVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQIHSHVLK 314
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
+ N+E + ++ A+ G V ++ ++
Sbjct: 315 M-NLEYDLSIQNSLISFYAKCGNVTDAYKIF 344
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 42/238 (17%)
Query: 49 MPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCV-RVGNVPLALEF 107
M +++ W M+ Y G + A +LF++MP+R ++N MI G + + LA E
Sbjct: 1 MSQKNIVTWTAMLVVYAKNGQIINARKLFDKMPERTTATYNAMISGYILKARKFHLAEEL 60
Query: 108 FNRMPA--RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
+ +P R+ V N+++ +++ E L++F+ + ES
Sbjct: 61 YREVPCEFRDPVCSNALMNGYLKIGETNEALRVFENVGES-------------------- 100
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
K DV+ + ++ + G + AR +FD MP RNVVSW++MI
Sbjct: 101 ------------------KRDVVSWSAVVVGLCRDGRIGYARKLFDRMPERNVVSWSAMI 142
Query: 226 MGYGLHGNGEKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
GY G E FLEM ++G + N T ++ C + G V +G L+ R+
Sbjct: 143 DGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKDGMQIHGLVSRL 200
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 206/393 (52%), Gaps = 12/393 (3%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLF----DEMPVRDVWNWNCMI 61
G V A F + +D+ +MI G+V NG A LF E V + ++
Sbjct: 428 GDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVL 487
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCV-----RVGNVPLALEFFNRMPARNV 116
A+ L+ EL + + + + C + + + G + LA +FF RMP ++
Sbjct: 488 PACAALASLKLGKELHCDILKKGLENV-CQVGSSITYMYAKSGRLDLAYQFFRRMPVKDS 546
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
V WN M+ + + +F +M SG + +L + L+ACA+ L G +H
Sbjct: 547 VCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKF-DSVSLSATLSACANYPALYYGKELHC 605
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
F+ N+ D +++ L+ MY KCG + LAR VFD M +N VSWNS+I YG HG +
Sbjct: 606 FVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRE 665
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
L+LF EM + G +P+ TF+ ++SAC HAG+V EG +YF M Y I ++EH+ C+V
Sbjct: 666 CLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMV 725
Query: 297 DLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDI 356
DL RAG + + + IK + C H + EL ++ +K L+EL+P +
Sbjct: 726 DLYGRAGRLHEAFDTIKSMPF-TPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNS 784
Query: 357 GPYIMLSNTYAAQGRWDDVERVRVMIREKGLQK 389
G Y++LSN +A G W+ V +VR +++EKG+QK
Sbjct: 785 GYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQK 817
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 156/338 (46%), Gaps = 43/338 (12%)
Query: 21 LDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM 80
+DL +S+I + NG A+ LFDE+PVRD WN M+ GYV GD +A F+ M
Sbjct: 210 MDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEM 269
Query: 81 PDRDV----VSWNCMIDGCV-----------------------------------RVGNV 101
+ V VS+ C++ C + GN+
Sbjct: 270 RNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNL 329
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A + F+ MP + V+WN ++A +V+ E + +F M+ SG + + T S L +
Sbjct: 330 FDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKL-DSITFASFLPS 388
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
G L VHS+I + + DV L + L+ +Y K G +++A F + + +V
Sbjct: 389 VLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVC 448
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH-AGMVMEGWWYFDLMR 280
+MI GY L+G +AL LF + ++G PN T VL AC A + + + D+++
Sbjct: 449 TAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILK 508
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ +E + I + A++G + + + + + VK
Sbjct: 509 K--GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK 544
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 106/245 (43%), Gaps = 35/245 (14%)
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
M+ YV + LF R+ + WN +I G +G AL FF RM NV
Sbjct: 117 MLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVA-- 174
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
P++ T V+ AC L + + VH +
Sbjct: 175 ------------------------------PDKYTFPYVIKACGGLNNVPLCKMVHELAR 204
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
S +D+ + + L+ +Y G + A+ +FDE+PVR+ + WN M+ GY +G+ AL
Sbjct: 205 SMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALG 264
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL-MRRVYNIEPKVEHYGCIVDL 298
F EM KPN +FVC+LS C G+V G L +R + +P V + I+ +
Sbjct: 265 TFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVAN--TIITM 322
Query: 299 LARAG 303
++ G
Sbjct: 323 YSKCG 327
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 212/399 (53%), Gaps = 37/399 (9%)
Query: 1 MYSVFGRVSDARLLFDSSL-TLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC 59
MYSV G + AR +F+ + D S+NSMI+G+V+ G+ A++LFD +P+R+ W C
Sbjct: 341 MYSVCGLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTC 400
Query: 60 MIAGYVAVGDLEAANELFERMP--DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
MI+GY++ G + A+ LF+ MP D+D ++W MI G V+
Sbjct: 401 MISGYLSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQ-------------------- 440
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
N ++A E + +F EMM G A P +T + A + L +G +H+
Sbjct: 441 --NELIA---------EAINLFAEMMAQG-ASPINSTYAVLFGAVGSVAYLDLGWQLHAM 488
Query: 178 -IKS-NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
+K+ + DV L L++MY KCG ++ A +F M R+ +SWNSMIMG HG
Sbjct: 489 QLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSDHGRAN 548
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
+AL ++ M + G P+ TF+ VL+AC HAG V +G F +M Y ++P +EHY I
Sbjct: 549 EALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHYVSI 608
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
+++L RAG VK++EE + + V+ + D+++ A RL+EL+P++
Sbjct: 609 INILGRAGRVKDAEEFVLRLPVEPNHTIWGALIGVCGLSKTDADIARRAATRLLELDPLN 668
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
++ L N YAA R + +R +R KG++K S
Sbjct: 669 APGHVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGCS 707
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 160/282 (56%), Gaps = 8/282 (2%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ G + DAR +FD ++VS+NSM+ G ++NG+ ARK+FD+ P ++V +WN MI
Sbjct: 144 YAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMI 203
Query: 62 AGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
GYV G ++ A +LF+++ R+V++W MI G RVG+V A F MP +NVVSW +
Sbjct: 204 EGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTA 263
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
M+ + E L +F +MM +A PNE T VS++ ACA +G +G +H+ + N
Sbjct: 264 MIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILN 323
Query: 182 NIKV---DVLLSTCLLTMYVKCGAMDLARDVFD-EMPVRNVVSWNSMIMGYGLHGNGEKA 237
K+ D L L+ MY CG MD AR VF+ +M + S+NSMI GY G KA
Sbjct: 324 RWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKA 383
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
ELF P N + C++S AG V++ FD M
Sbjct: 384 QELF----DTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDM 421
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 147/288 (51%), Gaps = 25/288 (8%)
Query: 2 YSVFGRVSDARLLFDS----SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNW 57
Y G + +AR + S ++ +V + SM+ + K+G AR LFD MP R++ +
Sbjct: 47 YLTNGFLHEARTILHSFPSGNIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTY 106
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N M++ Y+ G A F+ MP+R+VVSW M+ G +G + A + F+ MP RNVV
Sbjct: 107 NAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVV 166
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
SWNSM+ +R E K+FD+ + N + +++ G++ +
Sbjct: 167 SWNSMVVGLIRNGDLEEARKVFDDTPDK-----NVVSWNAMIEGYVENGRMDDAKDLFDQ 221
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
I+ N V+ T +++ Y + G ++ A +F MP +NVVSW +MI G+ +G +A
Sbjct: 222 IECRN----VITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREA 277
Query: 238 LELFLEMEK-KGPKPNDATFVCVLSACT-----------HAGMVMEGW 273
L LFL+M KPN+ TFV ++ AC HA M++ W
Sbjct: 278 LLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRW 325
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 215/428 (50%), Gaps = 10/428 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ G + +A L+FD D VS+N++I H +N LF M D +
Sbjct: 416 MYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYT 475
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDV-VSW---NCMIDGCVRVGNVPLALEFFNRMP 112
+ ++ L E+ R+ + + W + +ID + G + A + R+
Sbjct: 476 FGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLE 535
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R VSWNS+++ K L F M++ G +P+ T +VL CA+L + +G
Sbjct: 536 ERTTVSWNSIISGFSSEKQGENALSYFSRMLQVG-VIPDNFTYATVLDICANLATVELGK 594
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H I + DV +++ ++ MY KCG M +R +F++ P R+ V+W++MI Y HG
Sbjct: 595 QIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHG 654
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
GE A++LF EM+ + KPN F+ VL AC H G V +G YF MR Y ++P++EHY
Sbjct: 655 LGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHY 714
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VDLL R+G V + ELI+ + + C + E+ E A L++L+
Sbjct: 715 SCMVDLLGRSGQVNEALELIESMPFE-ADDVIWRTLLGICRLQGNVEVAEKAANSLLQLD 773
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P D Y++LSN YA G W +V ++R ++ L+KE S + + D + V + +
Sbjct: 774 PQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAH 833
Query: 413 HRKRIMYS 420
R +Y
Sbjct: 834 PRSEEIYQ 841
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 164/381 (43%), Gaps = 41/381 (10%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
+FD D++S+N+MI G+ G A+ LFD MP RDV +WN M++ Y+ G +
Sbjct: 95 VFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKS 154
Query: 74 NELFERMP---------------------------------------DRDVVSWNCMIDG 94
E+F +M D DVV+ ++D
Sbjct: 155 IEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDM 214
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
+ A F MP RN V W++++A +VR F E LK++ M++ G V ++AT
Sbjct: 215 YSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGV-SQAT 273
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
S +CA L +G +H++ N D ++ T L MY KC M AR VF+ P
Sbjct: 274 FASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
S N++I+GY +ALE+F ++K ++ + L+AC+ +EG
Sbjct: 334 NPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ 393
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTT 334
L + ++ + I+D+ A+ G + + + + +K
Sbjct: 394 LHGLAVKC-GLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNE 452
Query: 335 HMDSELGEIVAKRLIELEPMD 355
H++ L V+ +EP D
Sbjct: 453 HVEETLALFVSMLRSTMEPDD 473
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 1/213 (0%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
V V+ NC++ Y +L A +F++MP RDV+SWN MI G VGN+ A F+
Sbjct: 70 VPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDS 129
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
MP R+VVSWNSML+ +++ + +++F + M E + AT VL AC + +
Sbjct: 130 MPERDVVSWNSMLSCYLQNGFHRKSIEIFTK-MRLLEIQHDYATFAVVLKACTGIEDYGL 188
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G+ VH DV+ T L+ MY C +D A ++F EMP RN V W+++I GY
Sbjct: 189 GLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVR 248
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ + L+L+ M +G + ATF +C
Sbjct: 249 NDRFTEGLKLYKVMLDEGMGVSQATFASAFRSC 281
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 151/318 (47%), Gaps = 14/318 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKL----------FDEMP 50
MY+ R+ DAR +F++ S+N++I G+ + + A ++ FDE+
Sbjct: 315 MYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEIS 374
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ I GY+ ++ + D ++ N ++D + G + A F+
Sbjct: 375 LSGALTACSAIKGYLE--GIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDD 432
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M ++ VSWN+++A H + + E L +F M+ S P++ T SV+ ACA L+
Sbjct: 433 MEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRS-TMEPDDYTFGSVVKACAGKKALNY 491
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
GM VH + + + +D + + ++ MY KCG + A + + + R VSWNS+I G+
Sbjct: 492 GMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSS 551
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
GE AL F M + G P++ T+ VL C + V G + ++ + V
Sbjct: 552 EKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKL-QLHSDVY 610
Query: 291 HYGCIVDLLARAGLVKNS 308
IVD+ ++ G +++S
Sbjct: 611 IASTIVDMYSKCGNMQDS 628
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 15 FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAAN 74
FDS D+V+ +++D + + A +F EMP R+ W+ +IAGYV
Sbjct: 201 FDS----DVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGL 256
Query: 75 ELFERMPDR---------------------------------------DVVSWNCMIDGC 95
+L++ M D D + +D
Sbjct: 257 KLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMY 316
Query: 96 VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
+ + A + FN P S N+++ + R E L++F + +S +E +L
Sbjct: 317 AKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDF-DEISL 375
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
LTAC+ + G+ +H + ++ ++ +L MY KCGA+ A +FD+M +
Sbjct: 376 SGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEI 435
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
++ VSWN++I + + + E+ L LF+ M + +P+D TF V+ AC
Sbjct: 436 KDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKAC 483
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 31/142 (21%)
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
T + C++L ++ G H+ I V +S CLL Y KC ++ A +VFD+M
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 214 PVRNVVSWNSMIMGYGLHGNGE-------------------------------KALELFL 242
P R+V+SWN+MI GY GN E K++E+F
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 243 EMEKKGPKPNDATFVCVLSACT 264
+M + + ATF VL ACT
Sbjct: 160 KMRLLEIQHDYATFAVVLKACT 181
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 215/428 (50%), Gaps = 10/428 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ G + +A L+FD D VS+N++I H +N LF M D +
Sbjct: 416 MYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYT 475
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDV-VSW---NCMIDGCVRVGNVPLALEFFNRMP 112
+ ++ L E+ R+ + + W + +ID + G + A + R+
Sbjct: 476 FGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLE 535
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R VSWNS+++ K L F M++ G +P+ T +VL CA+L + +G
Sbjct: 536 ERTTVSWNSIISGFSSEKQGENALSYFSRMLQVG-VIPDNFTYATVLDICANLATVELGK 594
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H I + DV +++ ++ MY KCG M +R +F++ P R+ V+W++MI Y HG
Sbjct: 595 QIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHG 654
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
GE A++LF EM+ + KPN F+ VL AC H G V +G YF MR Y ++P++EHY
Sbjct: 655 LGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHY 714
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VDLL R+G V + ELI+ + + C + E+ E A L++L+
Sbjct: 715 SCMVDLLGRSGQVNEALELIESMPFE-ADDVIWRTLLGICRLQGNVEVAEKAANSLLQLD 773
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P D Y++LSN YA G W +V ++R ++ L+KE S + + D + V + +
Sbjct: 774 PQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAH 833
Query: 413 HRKRIMYS 420
R +Y
Sbjct: 834 PRSEEIYQ 841
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 164/381 (43%), Gaps = 41/381 (10%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
+FD D++S+N+MI G+ G A+ LFD MP RDV +WN M++ Y+ G +
Sbjct: 95 VFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKS 154
Query: 74 NELFERMP---------------------------------------DRDVVSWNCMIDG 94
E+F +M D DVV+ ++D
Sbjct: 155 IEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDM 214
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
+ A F MP RN V W++++A +VR F E LK++ M++ G V ++AT
Sbjct: 215 YSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGV-SQAT 273
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
S +CA L +G +H++ N D ++ T L MY KC M AR VF+ P
Sbjct: 274 FASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
S N++I+GY +ALE+F ++K ++ + L+AC+ +EG
Sbjct: 334 NPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ 393
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTT 334
L + ++ + I+D+ A+ G + + + + +K
Sbjct: 394 LHGLAVKC-GLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNE 452
Query: 335 HMDSELGEIVAKRLIELEPMD 355
H++ L V+ +EP D
Sbjct: 453 HVEETLALFVSMLRSTMEPDD 473
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 114/213 (53%), Gaps = 1/213 (0%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
V V+ NC++ Y +L A +F++MP RDV+SWN MI G VGN+ A F+
Sbjct: 70 VPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDS 129
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
MP R+VVSWNSML+ +++ + +++F + M E + AT VL AC + +
Sbjct: 130 MPERDVVSWNSMLSCYLQNGFHRKSIEIFTK-MRLLEIQHDYATFAVVLKACTGIEDYGL 188
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G+ VH DV+ T L+ MY C +D A ++F EMP RN V W+++I GY
Sbjct: 189 GLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVR 248
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ + L+L+ M +G + ATF +C
Sbjct: 249 NDRFTEGLKLYKVMLDEGMGVSQATFASAFRSC 281
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 151/318 (47%), Gaps = 14/318 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKL----------FDEMP 50
MY+ R+ DAR +F++ S+N++I G+ + + A ++ FDE+
Sbjct: 315 MYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEIS 374
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ I GY+ ++ + D ++ N ++D + G + A F+
Sbjct: 375 LSGALTACSAIKGYLE--GIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDD 432
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M ++ VSWN+++A H + + E L +F M+ S P++ T SV+ ACA L+
Sbjct: 433 MEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRS-TMEPDDYTFGSVVKACAGKKALNY 491
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
GM VH + + + +D + + ++ MY KCG + A + + + R VSWNS+I G+
Sbjct: 492 GMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSS 551
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
GE AL F M + G P++ T+ VL C + V G + ++ + V
Sbjct: 552 EKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKL-QLHSDVY 610
Query: 291 HYGCIVDLLARAGLVKNS 308
IVD+ ++ G +++S
Sbjct: 611 IASTIVDMYSKCGNMQDS 628
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 15 FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAAN 74
FDS D+V+ +++D + + A +F EMP R+ W+ +IAGYV
Sbjct: 201 FDS----DVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGL 256
Query: 75 ELFERMPDR---------------------------------------DVVSWNCMIDGC 95
+L++ M D D + +D
Sbjct: 257 KLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMY 316
Query: 96 VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
+ + A + FN P S N+++ + R E L++F + +S +E +L
Sbjct: 317 AKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDF-DEISL 375
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
LTAC+ + G+ +H + ++ ++ +L MY KCGA+ A +FD+M +
Sbjct: 376 SGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEI 435
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
++ VSWN++I + + + E+ L LF+ M + +P+D TF V+ AC
Sbjct: 436 KDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKAC 483
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 31/142 (21%)
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
T + C++L ++ G H+ I V +S CLL Y KC ++ A +VFD+M
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 214 PVRNVVSWNSMIMGYGLHGNGE-------------------------------KALELFL 242
P R+V+SWN+MI GY GN E K++E+F
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 243 EMEKKGPKPNDATFVCVLSACT 264
+M + + ATF VL ACT
Sbjct: 160 KMRLLEIQHDYATFAVVLKACT 181
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 205/374 (54%), Gaps = 4/374 (1%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPD-RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
N ++ Y G++E AN++F+ + + R++V+ N +I G V +G+ A F+ M ++
Sbjct: 498 NAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDL 557
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
+WN M+ ++ + L++F ++ G P+ T++S++ C + + + H
Sbjct: 558 TTWNLMVRVYAENDCPEQALELFLKLQTQGMK-PDVVTIMSLIPVCTQMASVHLLRQCHG 616
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
+I ++ + D+ L LL Y KCG + A +F +++V + +MI GY +HG EK
Sbjct: 617 YIIRSSFE-DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEK 675
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
ALE F M G KP+ F +LSAC+HAG + EG FD + +++ ++P +E + C+V
Sbjct: 676 ALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVV 735
Query: 297 DLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDI 356
DLLAR G V + + + ++ C T+ + ELG IVA +L ++E DI
Sbjct: 736 DLLARGGHVSEAYSFVTKIPIE-ANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDI 794
Query: 357 GPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKR 416
G YI+LSN YAA RWD V VR M+R K L+K A S + +E + + V + S ++
Sbjct: 795 GNYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKPAGCSWIEVERTNNIFVVGDCSHPQRN 854
Query: 417 IMYSMLSELGAHIK 430
++YS L L +K
Sbjct: 855 LIYSTLCTLDQQVK 868
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 14/278 (5%)
Query: 1 MYSVFGRVS-DARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---PVRDVWN 56
MY+ G V+ DA +FDS + D+VS+N+MI G +NG A LF M V+ +
Sbjct: 190 MYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYA 249
Query: 57 WNCMIAGYVAVGDLEAANELFERM-------PD--RDVVSWNCMIDGCVRVGNVPLALEF 107
I A D A+ ++ P+ DV N ++ ++VG A
Sbjct: 250 TVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESL 309
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F M AR++VSWN+++A + + + L +F ++ + + T+VS+L ACA L
Sbjct: 310 FWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDN 369
Query: 168 LSVGMWVHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L G VH++I + + D L++ Y KCG ++ A F + ++++SWNS++
Sbjct: 370 LQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILD 429
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+G + + L L M K +P+ T + ++ C
Sbjct: 430 AFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCA 467
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 2/161 (1%)
Query: 106 EFFNRMPARNVVSWNSMLALHVRA-KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
+ F++ + V WN +L+ + R+ K+ + +K+F M SGE +P+ T+ +VL CA
Sbjct: 99 KLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCAR 158
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL-ARDVFDEMPVRNVVSWNS 223
G L+ G VH ++ + ++D L++MY KCG + A VFD + ++VVSWN+
Sbjct: 159 SGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNA 218
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
MI G +G ++A LF M K KPN AT +L C
Sbjct: 219 MIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCA 259
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 148/338 (43%), Gaps = 25/338 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGA-ARKLFDEMPVR-DVWNWN 58
MY+ G + D LFD D V +N ++ G+ ++G+ A K+F M +V +
Sbjct: 87 MYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSS 146
Query: 59 CMIAGYVAV----GDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPL-ALEFFN 109
IA + V G+L + + + D + N ++ + G V A F+
Sbjct: 147 VTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFD 206
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK-- 167
+ ++VVSWN+M+A E +F MM+ G PN AT+ ++L CA +
Sbjct: 207 SIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMK-GSVKPNYATVANILPVCASFDENI 265
Query: 168 -LSVGMWVHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
G +HS++ + + DV + LL+ Y+K G A +F M R++VSWN++I
Sbjct: 266 AHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTII 325
Query: 226 MGYGLHGNGEKALELF-----LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
GY L+G K+L +F LEM + T V +L AC + G +
Sbjct: 326 AGYALNGEWLKSLHVFGNLVSLEM----LLLDSVTMVSILPACAQLDNLQAGKQVHAYIL 381
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
R + +V A+ G ++ + +S K
Sbjct: 382 RHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRK 419
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 17/172 (9%)
Query: 111 MPARNVVSWNSML------ALHVRAKSFWE-CLKMFDEMMESGEAVPNEATLVSVLTACA 163
M RN ++W S + + H A SF+ CLK +S P+ L ++L +C+
Sbjct: 1 MLQRNFMTWASTIRSLCVDSRHNEALSFFHHCLK------DSAAFKPDHEVLAAILKSCS 54
Query: 164 HLGKLSVGMWVHSFI-KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
L ++G +HS++ K ++ V S LL MY KCG +D +FD+ + V WN
Sbjct: 55 ALLASNLGKCLHSYVVKQGHVSCHVT-SKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWN 113
Query: 223 SMIMGYGLHG-NGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEG 272
++ GY G N +++F M G P+ T VL C +G + G
Sbjct: 114 IVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGG 165
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 233/459 (50%), Gaps = 55/459 (11%)
Query: 35 KNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-------------- 80
KN E+G K+FD++P +V W C+I GYV A E+F+ M
Sbjct: 156 KNMESGL--KVFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVN 213
Query: 81 --------------------------------PDRDVVSWNCMIDGCVRVGNVPLALEFF 108
+ +V+ +++ + G + +A E F
Sbjct: 214 ALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELF 273
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
N+MP RN+V+WN M+ + + + + E L +F M+ +G P++AT +SVL+ CA L
Sbjct: 274 NKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLANG-FCPDKATFLSVLSVCARRCVL 332
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD-EMPVRNVVSWNSMIMG 227
++G VH+++ +N+ D+ L+T LL MY K G + A+ +F+ + ++VV W SMI
Sbjct: 333 ALGETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINA 392
Query: 228 YGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
+HG+G +AL LF M++ P+ T++ VL AC+H G+V E F+LM + Y I
Sbjct: 393 LAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGIL 452
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P+ EHY C+VDLL+RAG + +E+L++ +S++ C H + + V
Sbjct: 453 PEKEHYSCMVDLLSRAGHFREAEKLMETMSIR-PNIAIWGALLNGCQIHENIPVASQVKV 511
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE--DFESK 404
RL ELEP+ G Y +LSN YA G+W++V R R M++ K + K S V ++ E++
Sbjct: 512 RLAELEPIQSGIYALLSNIYANSGKWEEVNRTRKMMKHKRIAKTIGHSSVEMKVSSDETQ 571
Query: 405 YFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSIEKDNFR 443
+ + S + I + +S I + G ++ D R
Sbjct: 572 FMCFHKSSAIELINFGAISRESI-IAVKKCGHLKNDKLR 609
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 144/275 (52%), Gaps = 30/275 (10%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDL 70
A LLF + ++ +NSMI G+ K+ + L+ +M +++ ++ + +V L
Sbjct: 60 ANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQM-LQNGYSPDHFTFPFV----L 114
Query: 71 EAANELFERMPDR-------------DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
+A + +++++ + +V +++ V N+ L+ F+++P NVV
Sbjct: 115 KACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVV 174
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS- 176
+W ++ +V E L++F EM G NE T+V+ L ACA + G WVH
Sbjct: 175 AWTCLINGYVINDQPREALEVFKEMGRWG-VEANEVTMVNALIACARCRDVDTGRWVHER 233
Query: 177 --------FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
F+ ++N +V+L+T ++ MY KCG +++AR++F++MP RN+V+WN MI Y
Sbjct: 234 VCKAGYDPFVFASN--SNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAY 291
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ +AL LF M G P+ ATF+ VLS C
Sbjct: 292 NQYERYNEALGLFFYMLANGFCPDKATFLSVLSVC 326
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 7/212 (3%)
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F ++ + NV +NSM+ + ++ + L ++ +M+++G + P+ T VL AC+ +
Sbjct: 63 LFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYS-PDHFTFPFVLKACSFIY 121
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
G VHS I + + +V ++T LL MYV+C M+ VFD++P NVV+W +I
Sbjct: 122 DQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLIN 181
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR----- 281
GY ++ +ALE+F EM + G + N+ T V L AC V G W + + +
Sbjct: 182 GYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDP 241
Query: 282 -VYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
V+ V IV++ A+ G + + EL
Sbjct: 242 FVFASNSNVILATAIVEMYAKCGWLNVARELF 273
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 209/387 (54%), Gaps = 10/387 (2%)
Query: 22 DLVSYNSMIDGHVKNGETGAA----RKLFDEMPVRDVWNWNCMIAGYVAVGDL----EAA 73
D YNS+++ V++G G A ++ DE V D + ++ + DL +
Sbjct: 191 DAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVH 250
Query: 74 NELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFW 133
+L + DV + ++D + G+V A + F+ + RNVV W S++ +++ F
Sbjct: 251 AQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFE 310
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
E L + M G + NE T +L A A + L G +H+ ++ IK V++ L
Sbjct: 311 ETLNLLSCMDREG-TMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNAL 369
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
+ MY KCG +D + DVF +M R++++WN+MI GY HG G++AL LF +M G PN
Sbjct: 370 INMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNH 429
Query: 254 ATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
TFV VLSAC H +V EG++Y + + + + +EP +EHY C+V +L RAG+++ +E ++
Sbjct: 430 VTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMR 489
Query: 314 YVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWD 373
VK C H + LG +A+ +++++P D+G Y +LSN YA WD
Sbjct: 490 TTQVK-WDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWD 548
Query: 374 DVERVRVMIREKGLQKEAASSVVHLED 400
V +R M+RE+ ++KE S + + +
Sbjct: 549 SVTMIRKMMRERNVKKEPGVSWIEIRN 575
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 126/260 (48%), Gaps = 14/260 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFD----EMPVRDVWN 56
M+ G V AR +FD ++V + S++ +++NGE L E + + +
Sbjct: 271 MFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFT 330
Query: 57 WNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ ++ + + L + L R+ V+ N +I+ + G + + + F M
Sbjct: 331 FAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMR 390
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R++++WN+M+ + + + L +F +M+ +GE PN T V VL+ACAHL ++ G
Sbjct: 391 NRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGEC-PNHVTFVGVLSACAHLALVNEGF 449
Query: 173 -WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGL 230
+++ +K ++ + TC++ + + G ++ A + V+ +VV+W ++ +
Sbjct: 450 YYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNI 509
Query: 231 HGN---GEKALELFLEMEKK 247
H N G K E L+M+ +
Sbjct: 510 HRNYNLGTKIAETILQMDPR 529
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
+++ N +I+ V+ + LA F+ M R+VVS+N ++ ++ + E +K+F M+
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
S PNE +VL+ACAH G++ GM H F+ + + + L+ MY KC +
Sbjct: 114 SSLYQ-PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHV 172
Query: 204 DLARDVFDEMPV-----RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
DLA V + + +NS++ G +A+E+ M +G + T+V
Sbjct: 173 DLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVS 232
Query: 259 VLSAC 263
V+ C
Sbjct: 233 VMGLC 237
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 175 HSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
HS+ + N I+++ L++ +YVKC + LAR +FDEM +R+VVS+N ++ GY G
Sbjct: 48 HSYREFNIIQLNSLIN-----LYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEH 102
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ ++LF M +PN+ F VLSAC H+G V EG
Sbjct: 103 LEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEG 140
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 215/424 (50%), Gaps = 50/424 (11%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAV 67
V D R+ S+ L + +D + + G++ AR +FDEM V++ +W +I+G
Sbjct: 196 VVDGRIRIQHSVFLS----TAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANN 251
Query: 68 GDLEAANELFERM------PDRDVVSWNCMIDGCVRVGNVP------------------- 102
D + A + M P+R V+ ++ C R G V
Sbjct: 252 QDYDVALACYREMQVEGVSPNR--VTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHS 309
Query: 103 -----------------LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
LA F R+VV W+S++ + R + LK+F++M +
Sbjct: 310 FSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKM-RT 368
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
E PN TL++V++AC +L G +H +I I + + L+ MY KCG++D
Sbjct: 369 EETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDD 428
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
+R +F EMP R+ V+WNSMI YGLHG GE+AL+ F EM+++G K + TF+ VLSAC H
Sbjct: 429 SRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNH 488
Query: 266 AGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXX 325
AG+V EG F+ + I +EHY C++DL R+G ++++ E+++ + +K
Sbjct: 489 AGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMK-PSARIW 547
Query: 326 XXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREK 385
C H ++ E ++ +LI EP + Y +LS +A +GRW D+E+VR ++ +
Sbjct: 548 SSLVSSCKLHGRLDIAESLSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQ 607
Query: 386 GLQK 389
L+K
Sbjct: 608 RLRK 611
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 6/194 (3%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
D + N +I + ++ A + F+ MP R+ ++WNSM+ +++ E L+M +
Sbjct: 100 DPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFY 159
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLS--VGMWVHSFIKSNN---IKVDVLLSTCLLTMYV 198
G +P L S+++ C L +G +H + + I+ V LST + Y
Sbjct: 160 FLG-FLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYF 218
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
+CG +AR VFDEM V+N VSW ++I G + + + AL + EM+ +G PN T +
Sbjct: 219 RCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIA 278
Query: 259 VLSACTHAGMVMEG 272
+L+AC G V G
Sbjct: 279 LLAACARPGFVKYG 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 132 FWECLKMFDEMMESGE---AVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVL 188
+ + L+ F ++ S ++P L SV+ AC+ + G +H D +
Sbjct: 45 YHQTLQFFTQLHFSAHHFNSIP--FVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPI 102
Query: 189 LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
+S +++MY K ++ AR VFD MP R+ ++WNSMI Y +G +AL++ + G
Sbjct: 103 VSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLG 162
Query: 249 PKPNDATFVCVLSAC 263
P ++S C
Sbjct: 163 FLPKPELLASMVSMC 177
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/438 (31%), Positives = 222/438 (50%), Gaps = 44/438 (10%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIA 62
S+ GR A+ + D+++ N +I+ + K AR +FDEMPV+ V +WN MI
Sbjct: 72 SIAGRACHAQFIL-VGFETDILTSNMLINMYSKCSLVHDARIVFDEMPVKSVVSWNTMIG 130
Query: 63 GYVAVGDLEAANELFERMPDRDVV-------------SWNCMIDGCVR------------ 97
+ + A LF +M + ++ C I C++
Sbjct: 131 ALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILECMQLHAFSIKVSVDS 190
Query: 98 ---VGNVPL-----------ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
VG L A + F MP N V+W+S+LA +V+ L +F +
Sbjct: 191 NCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQ 250
Query: 144 ESGEAVPNEATLVS-VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
G +A L+S + ACA L L G VH+ + ++ +++ L+ MY KCG
Sbjct: 251 LMG--FEQDAFLISSAVCACAGLATLIEGKQVHAISCKSGFGSNIYVTSSLIDMYAKCGC 308
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+ A VF +R++V WN+MI G+G H +A+ LF +M+++G P+D T+V VL+A
Sbjct: 309 IREAYIVFQGEELRSIVLWNAMISGFGRHACALEAMILFEKMQQRGLFPDDVTYVSVLNA 368
Query: 263 CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXX 322
C+H G+ +G YFDLM R +N+ P V HY C+VD+L RAGLV + +LI+ +
Sbjct: 369 CSHMGLHEQGHKYFDLMVREHNLRPSVLHYSCMVDILGRAGLVHKAYDLIERMPFS-ATS 427
Query: 323 XXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMI 382
C H + E EI AK L E+EP + G +++L+N YAA +W++V + R ++
Sbjct: 428 SIWGSLLASCRIHGNIEFAEIAAKHLFEMEPDNAGNHVLLANIYAANKKWEEVAKTRKLL 487
Query: 383 REKGLQKEAASSVVHLED 400
R+ L+K+ +S + +++
Sbjct: 488 RDSELKKDRGTSWIEIKN 505
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%)
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
+ L ++L CA G H+ + D+L S L+ MY KC + AR VFDE
Sbjct: 57 SNLQNILQLCAKSRSSIAGRACHAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDE 116
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
MPV++VVSWN+MI ++AL LF++M ++G N+ T VL C ++E
Sbjct: 117 MPVKSVVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILE 175
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 189/340 (55%), Gaps = 37/340 (10%)
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
Y GD ++A+++F+ + + SWN +I G + G L
Sbjct: 142 YCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGG-----------------------L 178
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI---KS 180
A+ + + +F +M G P+ T+VSV++AC +G L + + +H ++ K+
Sbjct: 179 AM--------DAIVVFVDMKRHGFE-PDGITMVSVMSACGSIGDLYLALQLHKYVFQAKT 229
Query: 181 NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALEL 240
N V +L+S L+ MY KCG MDLA +VF M RNV SW SMI+GY +HG+ ++AL
Sbjct: 230 NEWTV-ILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGC 288
Query: 241 FLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLA 300
F M + G KPN TF+ VLSAC H G V EG +YFD+M+ +Y I P+++HYGC+VDLL
Sbjct: 289 FHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLG 348
Query: 301 RAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYI 360
RAGL ++ +++ + +K C H + ++ E VA+ L LEP + G Y+
Sbjct: 349 RAGLFDDARRMVEEMPMK-PNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYV 407
Query: 361 MLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
+LSN YA +G W +VER+R ++E L K A S+ D
Sbjct: 408 VLSNIYANKGLWKEVERIRSFMKEGRLAKIPAYSITTNSD 447
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y G A +FD + L S+N++I G + G A +F +M D
Sbjct: 141 LYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGIT 200
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSW------NCMIDGCVRVGNVPLALEFFNR 110
+++ ++GDL A +L + + W N +ID + G + LA E F
Sbjct: 201 MVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFAT 260
Query: 111 MPARNVVSWNSML---ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
M RNV SW SM+ A+H AK E L F M ESG PN T + VL+AC H G
Sbjct: 261 MEDRNVSSWTSMIVGYAMHGHAK---EALGCFHCMRESG-VKPNYVTFIGVLSACVHGGT 316
Query: 168 LSVGMWVHSFIKS-NNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMI 225
+ G + +K+ I + C++ + + G D AR + +EMP++ N V W ++
Sbjct: 317 VQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLM 376
Query: 226 MGYGLHGNGEKA 237
HGN + A
Sbjct: 377 GACEKHGNVDMA 388
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 14/207 (6%)
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
L F PA +WN+++ + R +S L+++ M+ +G +P+ TL VL A
Sbjct: 51 LLTRFLESNPAS--FNWNNIIRSYTRLESPQNALRIYVSMLRAG-VLPDRYTLPIVLKAV 107
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
+ + +G VHS+ ++ + + + +Y K G D A VFDE + SWN
Sbjct: 108 SQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWN 167
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
++I G G A+ +F++M++ G +P+ T V V+SAC G + Y L
Sbjct: 168 ALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDL-----YLALQLHK 222
Query: 283 YNIEPKVEHYGCI------VDLLARAG 303
Y + K + I +D+ + G
Sbjct: 223 YVFQAKTNEWTVILMSNSLIDMYGKCG 249
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 224/457 (49%), Gaps = 47/457 (10%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV- 85
NS++ + K G A LF EM +D+ +W+ M A Y G +LF M D+ +
Sbjct: 156 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIK 215
Query: 86 ---VSWNCMIDGCVRVGNVP-----------------------------------LALEF 107
V+ ++ C + N+ A++F
Sbjct: 216 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDF 275
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
FNRMP ++V++W + + + E + +F M+ SG P+ LV +LT + LG
Sbjct: 276 FNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR-PDAIALVKILTTVSELGI 334
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L + H+F+ N + + + L+ +Y KC +++ A VF M ++VV+W+S+I
Sbjct: 335 LQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 394
Query: 228 YGLHGNGEKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
YG HG GE+AL+ F +M KPN+ TF+ +LSAC+H+G++ EG FD+M Y ++
Sbjct: 395 YGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLK 454
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P EHY +VDLL R G + + +LI + ++ C H + ++GE+ AK
Sbjct: 455 PNSEHYAIMVDLLGRMGELDMALDLINNMPMQ-AGPDIWGALLGACRIHQNIKMGEVAAK 513
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
L L+ G YI+LSN Y W ++R +++EK L K SVV L++ E + F
Sbjct: 514 NLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKN-EVRSF 572
Query: 407 VKNYSVHRKR-IMYSMLSELGAHIK---LSPAGSIEK 439
V +H + +Y +L++L A ++ P IE+
Sbjct: 573 VAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQIEE 609
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 102/191 (53%)
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D D+ + +ID + G + A+E F P +VV W S+++ + ++ S L F
Sbjct: 47 DNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSR 106
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M+ S + P+ TLVSV +ACA L +G VH F+K + + L+ LL +Y K G
Sbjct: 107 MVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTG 166
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
++ A ++F EM ++++SW++M Y +G L+LF+EM K KPN T V VL
Sbjct: 167 SIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLR 226
Query: 262 ACTHAGMVMEG 272
AC + EG
Sbjct: 227 ACACISNLEEG 237
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 41/291 (14%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ +++ID + K G+ A ++F E P DV W +++GY G E A F RM
Sbjct: 49 DMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMV 108
Query: 82 -----DRDVVSWNCMIDGCVRVGNVPL--------------------------------- 103
D V+ + C ++ N L
Sbjct: 109 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 168
Query: 104 --ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A F M ++++SW++M A + + + L +F EM++ PN T+VSVL A
Sbjct: 169 KNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDK-RIKPNWVTVVSVLRA 227
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA + L GM +H + +++ +ST L+ MY+KC + + A D F+ MP ++V++W
Sbjct: 228 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAW 287
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ GY +G +++ +F M G +P+ V +L+ + G++ +
Sbjct: 288 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 338
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
S E P+ ++ L +CA L KL +G +H F+K I D+ + + L+ +Y KCG M+
Sbjct: 8 SIEEKPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMN 67
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM---EKKGPKPNDATFVCVLS 261
A +VF E P +VV W S++ GY G+ E AL F M EK P P T V V S
Sbjct: 68 DAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDP--VTLVSVAS 125
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
AC G ++R ++ K+ ++ L + G +KN+ L + +S K
Sbjct: 126 ACAQLSNFKLGRSVHGFVKR-KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK 181
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 237/480 (49%), Gaps = 60/480 (12%)
Query: 4 VFGRVSD---ARLLFDSSLTL----DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN 56
V G + D +L+ SL + D+V NS++ +++ E G A K+FDEMP R+V +
Sbjct: 135 VSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGS 194
Query: 57 WNCMIAGYVAVGDLEAAN-----ELFERMPDR---------------------------- 83
+N +I+G A+G+L+ + F RM +
Sbjct: 195 FNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRE 254
Query: 84 ----------------DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHV 127
DV + +ID R + L+ F++M +RN+ W +M+ +V
Sbjct: 255 LHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYV 314
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDV 187
+ + L +F EM PN +LVSVL AC L L G VH+F +
Sbjct: 315 QNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYI 374
Query: 188 LLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGNGEKALELFLEMEK 246
L L+ MY KCG++D AR VFD ++ ++W+S+I YGLHG G++AL + EM +
Sbjct: 375 SLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQ 434
Query: 247 KGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVK 306
+G KP+ T V VLSAC +G+V EG ++ + Y ++P VE GC+VDLL R+G +
Sbjct: 435 QGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLD 494
Query: 307 NSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTY 366
+ + I+ + + H +S ++ + L+ELEP + YI LSNTY
Sbjct: 495 QALDFIREMPI-IPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTY 553
Query: 367 AAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVH-RKRIMYSMLSEL 425
A+ RWD++ VR M++E+GL+K S + + D ++ +F VH +Y ML +L
Sbjct: 554 ASSRRWDEITEVRSMMKERGLRKVPGISWITISD-KNHFFTVADKVHPSSSSIYEMLDDL 612
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 136/311 (43%), Gaps = 81/311 (26%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----------- 50
Y+ FG ++L+FDS T ++ +NS+I+G+VKN + A LF +M
Sbjct: 71 YATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGRCLLPDDYTLA 130
Query: 51 ---------------------------VRDVWNWNCMIAGYVAVGDLEAANELFERMPDR 83
V D+ N +++ Y+ + A ++F+ MP R
Sbjct: 131 TISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQR 190
Query: 84 DVVSWNCMIDGCVRVGNVPLAL-----EFFNRMPARNVVSWNSMLALHVRAKSFWECLKM 138
+V S+N +I GC +GN+ +L FF RM + A +F
Sbjct: 191 NVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQG-----------YNADAF------ 233
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHL-GKLSVGMWVHSFIKSNNIKV----DVLLSTCL 193
T+ S+L C GK G +H ++ N + + DV + + L
Sbjct: 234 ---------------TVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSL 278
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-KPN 252
+ MY + + L+R VFD+M RN+ W +MI GY +G E AL LF EM++K +PN
Sbjct: 279 IDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPN 338
Query: 253 DATFVCVLSAC 263
+ V VL AC
Sbjct: 339 RVSLVSVLPAC 349
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 128/264 (48%), Gaps = 16/264 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN-- 58
MYS ++ +R +FD + ++ + +MI+G+V+NG A LF EM +D N
Sbjct: 281 MYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRV 340
Query: 59 CMIAGYVAVGDL------EAANELFERMPDRDVVSW-NCMIDGCVRVGNVPLALEFF-NR 110
+++ A G L + + +M D +S N +ID + G++ A F N
Sbjct: 341 SLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNG 400
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+++ ++W+S+++ + E L + EM++ G P+ T+V VL+AC G +
Sbjct: 401 SYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQG-IKPDMITVVGVLSACCRSGLVDE 459
Query: 171 GMWVH-SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS-WNSMIMGY 228
G+ ++ S +K V + C++ + + G +D A D EMP+ S W S++
Sbjct: 460 GISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTAS 519
Query: 229 GLHGNG---EKALELFLEMEKKGP 249
+HGN + A LE+E + P
Sbjct: 520 VIHGNSMTRDLAYRCLLELEPENP 543
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+I G+ ++ F+ + +NV WNS++ +V+ F + +F +M +P
Sbjct: 67 LISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGRC--LLP 124
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
++ TL ++ + L +G +H D+++ +++MY++C A VF
Sbjct: 125 DDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVF 184
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKAL-----ELFLEMEKKGPKPNDATFVCVLSAC 263
DEMP RNV S+N +I G GN + +L F M+ +G + T +L C
Sbjct: 185 DEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMC 242
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 224/457 (49%), Gaps = 47/457 (10%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV- 85
NS++ + K G A LF EM +D+ +W+ M A Y G +LF M D+ +
Sbjct: 248 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIK 307
Query: 86 ---VSWNCMIDGCVRVGNVP-----------------------------------LALEF 107
V+ ++ C + N+ A++F
Sbjct: 308 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDF 367
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
FNRMP ++V++W + + + E + +F M+ SG P+ LV +LT + LG
Sbjct: 368 FNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR-PDAIALVKILTTVSELGI 426
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L + H+F+ N + + + L+ +Y KC +++ A VF M ++VV+W+S+I
Sbjct: 427 LQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 486
Query: 228 YGLHGNGEKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
YG HG GE+AL+ F +M KPN+ TF+ +LSAC+H+G++ EG FD+M Y ++
Sbjct: 487 YGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLK 546
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P EHY +VDLL R G + + +LI + ++ C H + ++GE+ AK
Sbjct: 547 PNSEHYAIMVDLLGRMGELDMALDLINNMPMQ-AGPDIWGALLGACRIHQNIKMGEVAAK 605
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
L L+ G YI+LSN Y W ++R +++EK L K SVV L++ E + F
Sbjct: 606 NLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKN-EVRSF 664
Query: 407 VKNYSVHRKR-IMYSMLSELGAHIK---LSPAGSIEK 439
V +H + +Y +L++L A ++ P IE+
Sbjct: 665 VAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQIEE 701
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP-------------------- 81
A KLF E P + V+ WN ++ Y G+ LF +M
Sbjct: 55 AHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIAL 114
Query: 82 ------------------------DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
D D+ + +ID + G + A+E F P +VV
Sbjct: 115 KSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVV 174
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
W S+++ + ++ S L F M+ S + P+ TLVSV +ACA L +G VH F
Sbjct: 175 LWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+K + + L+ LL +Y K G++ A ++F EM ++++SW++M Y +G
Sbjct: 235 VKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDV 294
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
L+LF+EM K KPN T V VL AC + EG
Sbjct: 295 LDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEG 329
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 41/291 (14%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ +++ID + K G+ A ++F E P DV W +++GY G E A F RM
Sbjct: 141 DMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMV 200
Query: 82 -----DRDVVSWNCMIDGCVRVGNVPL--------------------------------- 103
D V+ + C ++ N L
Sbjct: 201 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 260
Query: 104 --ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A F M ++++SW++M A + + + L +F EM++ PN T+VSVL A
Sbjct: 261 KNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDK-RIKPNWVTVVSVLRA 319
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA + L GM +H + +++ +ST L+ MY+KC + + A D F+ MP ++V++W
Sbjct: 320 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAW 379
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ GY +G +++ +F M G +P+ V +L+ + G++ +
Sbjct: 380 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 430
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 10/229 (4%)
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME----SGEAVPNE 152
R ++ A + F P + V WN++L + + E L +F +M S E P+
Sbjct: 48 RYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDN 107
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
++ L +CA L KL +G +H F+K I D+ + + L+ +Y KCG M+ A +VF E
Sbjct: 108 YSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFME 167
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEM---EKKGPKPNDATFVCVLSACTHAGMV 269
P +VV W S++ GY G+ E AL F M EK P P T V V SAC
Sbjct: 168 YPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDP--VTLVSVASACAQLSNF 225
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
G ++R ++ K+ ++ L + G +KN+ L + +S K
Sbjct: 226 KLGRSVHGFVKR-KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK 273
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 224/457 (49%), Gaps = 47/457 (10%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV- 85
NS++ + K G A LF EM +D+ +W+ M A Y G +LF M D+ +
Sbjct: 248 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIK 307
Query: 86 ---VSWNCMIDGCVRVGNVP-----------------------------------LALEF 107
V+ ++ C + N+ A++F
Sbjct: 308 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDF 367
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
FNRMP ++V++W + + + E + +F M+ SG P+ LV +LT + LG
Sbjct: 368 FNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR-PDAIALVKILTTVSELGI 426
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
L + H+F+ N + + + L+ +Y KC +++ A VF M ++VV+W+S+I
Sbjct: 427 LQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 486
Query: 228 YGLHGNGEKALELFLEMEKKG-PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
YG HG GE+AL+ F +M KPN+ TF+ +LSAC+H+G++ EG FD+M Y ++
Sbjct: 487 YGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLK 546
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P EHY +VDLL R G + + +LI + ++ C H + ++GE+ AK
Sbjct: 547 PNSEHYAIMVDLLGRMGELDMALDLINNMPMQ-AGPDIWGALLGACRIHQNIKMGEVAAK 605
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
L L+ G YI+LSN Y W ++R +++EK L K SVV L++ E + F
Sbjct: 606 NLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKN-EVRSF 664
Query: 407 VKNYSVHRKR-IMYSMLSELGAHIK---LSPAGSIEK 439
V +H + +Y +L++L A ++ P IE+
Sbjct: 665 VAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQIEE 701
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 44/275 (16%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP-------------------- 81
A KLF E P + V+ WN ++ Y G+ LF +M
Sbjct: 55 AHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIAL 114
Query: 82 ------------------------DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
D D+ + +ID + G + A+E F P +VV
Sbjct: 115 KSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVV 174
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
W S+++ + ++ S L F M+ S + P+ TLVSV +ACA L +G VH F
Sbjct: 175 LWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+K + + L+ LL +Y K G++ A ++F EM ++++SW++M Y +G
Sbjct: 235 VKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDV 294
Query: 238 LELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
L+LF+EM K KPN T V VL AC + EG
Sbjct: 295 LDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEG 329
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 41/291 (14%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+ +++ID + K G+ A ++F E P DV W +++GY G E A F RM
Sbjct: 141 DMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMV 200
Query: 82 -----DRDVVSWNCMIDGCVRVGNVPL--------------------------------- 103
D V+ + C ++ N L
Sbjct: 201 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 260
Query: 104 --ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A F M ++++SW++M A + + + L +F EM++ PN T+VSVL A
Sbjct: 261 KNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDK-RIKPNWVTVVSVLRA 319
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA + L GM +H + +++ +ST L+ MY+KC + + A D F+ MP ++V++W
Sbjct: 320 CACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAW 379
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ GY +G +++ +F M G +P+ V +L+ + G++ +
Sbjct: 380 AVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 430
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 10/229 (4%)
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME----SGEAVPNE 152
R ++ A + F P + V WN++L + + E L +F +M S E P+
Sbjct: 48 RYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDN 107
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
++ L +CA L KL +G +H F+K I D+ + + L+ +Y KCG M+ A +VF E
Sbjct: 108 YSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFME 167
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEM---EKKGPKPNDATFVCVLSACTHAGMV 269
P +VV W S++ GY G+ E AL F M EK P P T V V SAC
Sbjct: 168 YPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDP--VTLVSVASACAQLSNF 225
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
G ++R ++ K+ ++ L + G +KN+ L + +S K
Sbjct: 226 KLGRSVHGFVKR-KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK 273
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 167/292 (57%), Gaps = 2/292 (0%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
++I + + G ARK+FDEM +V WN ++ GD+E A LFERMP R++
Sbjct: 152 TTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGDVEGAWGLFERMPVRNLT 211
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESG 146
SWN M+ G V+ G + LA F M R+ SW++M+ ++ SF + F E++
Sbjct: 212 SWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDR 271
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLA 206
P+E +L VL+ACA G G +H F++ V ++ L+ Y KCG +D+A
Sbjct: 272 NR-PSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMA 330
Query: 207 RDVFDEMPV-RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTH 265
+ VF M + +VSW SMI +HG ++A+ +F EME+ G +P+ TF+ +L AC+H
Sbjct: 331 KLVFQHMSAEKCIVSWTSMIAALAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSH 390
Query: 266 AGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSV 317
+G+V +G F MR Y IEP +EHYGC+VDL RA ++ + E I+ + +
Sbjct: 391 SGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPI 442
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 39/247 (15%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
NC + V N L L F+ P + +N+++ + + L+ F +++
Sbjct: 51 NCAVSISDHVLNYSLRL--FHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTL 108
Query: 149 VPNEATLVSVLTACAHLG-KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLAR 207
+P+ + L A+ G G+ +HS + + + T L++MY +CG + AR
Sbjct: 109 LPDSFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYAR 168
Query: 208 DVFDE-------------------------------MPVRNVVSWNSMIMGYGLHGNGEK 236
VFDE MPVRN+ SWN+M+ GY G
Sbjct: 169 KVFDEMSQPNVVAWNAVVTACFRCGDVEGAWGLFERMPVRNLTSWNTMLAGYVKAGQLWL 228
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIV 296
A +F EM+ + +DA++ ++ +G + + +F + R N +V G ++
Sbjct: 229 ARRVFCEMKMR----DDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTG-VL 283
Query: 297 DLLARAG 303
A+AG
Sbjct: 284 SACAQAG 290
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 219/431 (50%), Gaps = 4/431 (0%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSY-NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC 59
Y V V DA+ +++S + + +S+I G V G A +F + + + + N
Sbjct: 281 FYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNL 340
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA-RNVVS 118
MI GY G + + +LFE+M + + S N MI + G + A++ F++ RN V+
Sbjct: 341 MIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVT 400
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
WNSM++ ++ E LK++ M + +T + ACA+L G +H+ +
Sbjct: 401 WNSMMSGYIHNGEHSEALKLY-VTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHL 459
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+ +V + T L+ Y KCG + A+ F + NV +W ++I GY HG G +A+
Sbjct: 460 AKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAI 519
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDL 298
F M +G PN ATFV VLSAC+HAG+V EG +F M+ Y I P +EHY C+VDL
Sbjct: 520 SRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDL 579
Query: 299 LARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGP 358
L R+G VK +EE I + +K C + + ELGE A +L L+P +
Sbjct: 580 LGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWN-NVELGERAAVKLFSLDPNSVSA 638
Query: 359 YIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIM 418
+ LSN YA +GRW ++R ++ L+K+ S + L + + V++ + ++
Sbjct: 639 LVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVHLFSVEDTTHPYSDVI 698
Query: 419 YSMLSELGAHI 429
Y + + A I
Sbjct: 699 YKTVEHITATI 709
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 41/287 (14%)
Query: 2 YSVFGRVSDA----RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARK----LFDEMPVRD 53
YS +G+ ++A + S + + VS+++ + + G ++ LF R
Sbjct: 78 YSQWGKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRF 137
Query: 54 VWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+ ++ YV + A +FE + D + V W+ M+ G V+ + A+E F +MP
Sbjct: 138 GPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPV 197
Query: 114 RNVVSWNSMLALHVRAKSFWE-CLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+VV+W ++++ + + + E L +F M S E +PNE TL VL CA L L VG
Sbjct: 198 RDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGK 257
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM------------------- 213
VH + D +S+ L Y A+D A+ V++ M
Sbjct: 258 VVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSM 317
Query: 214 -------------PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
+ ++S N MI GY + G +K+ +LF +M K
Sbjct: 318 GRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLK 364
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 39/262 (14%)
Query: 85 VVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMME 144
V+S N I + G + A F+ MP R V SWN+M++ + + + E L + M
Sbjct: 37 VISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVS-FMH 95
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
S NE + + L+AC G L +G +HS + + + + + LL YV+C +
Sbjct: 96 SSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIR 155
Query: 205 LARDVFDE-------------------------------MPVRNVVSWNSMIMGYGLHGN 233
A VF+E MPVR+VV+W ++I GY +
Sbjct: 156 EAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKRED 215
Query: 234 G-EKALELFLEMEKKGPK-PNDATFVCVLSACT-----HAGMVMEGWWYFDLMRRVYNIE 286
G E+AL+LF M + PN+ T CVL C + G V+ G D ++
Sbjct: 216 GCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVS 275
Query: 287 PKVEHYGCIVDLLARAGLVKNS 308
+ + C+ D + A V S
Sbjct: 276 SALAEFYCVSDAVDDAKRVYES 297
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 227/438 (51%), Gaps = 10/438 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+YS G++ +A LLF + DL S+N+M+ G + A +LF M R D
Sbjct: 443 VYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQIT 502
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ + L+ ++ + D+ + ++D ++ G + A + FN++P
Sbjct: 503 FANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP 562
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ + V+W ++++ V + L + +M +G P+E T +++ AC+ L L G
Sbjct: 563 SPDDVAWTTVISGCVENGEEEQALFTYHQMRLAG-VQPDEYTFATLVKACSLLTALEQGK 621
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H+ I N D + T L+ MY KCG ++ A +F M R+V WN+MI+G HG
Sbjct: 622 QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHG 681
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
N E+AL F EM+ +G P+ TF+ VLSAC+H+G+ + + FD M++ Y +EP++EHY
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHY 741
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VD L+RAG ++ +E+++ + + C D E GE VA++L ++
Sbjct: 742 SCLVDALSRAGHIQEAEKVVSSMPFE-ASATMYRTLLNACRVQGDKETGERVAEKLFTMD 800
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P D Y++LSN YAA +W++ R M++ ++KE S + +++ + + S
Sbjct: 801 PSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSH 860
Query: 413 HRKRIMYSMLSELGAHIK 430
++Y+ + + IK
Sbjct: 861 EETDLIYNKVEYVMKRIK 878
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 153/333 (45%), Gaps = 44/333 (13%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF------ERM 80
NS I+ +VK G AR++F +M D+ +WN +I+G G E + LF +
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 81 PDR----------------------------------DVVSWNCMIDGCVRVGNVPLALE 106
PD+ D +ID + G + A
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAEL 455
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+ ++ SWN+M+ + ++ E L++F M E GE ++ T + A L
Sbjct: 456 LFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKA-DQITFANAAKAAGCLV 514
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
+L G +H+ + D+ + + +L MY+KCG M AR VF+++P + V+W ++I
Sbjct: 515 RLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVIS 574
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG-WWYFDLMRRVYNI 285
G +G E+AL + +M G +P++ TF ++ AC+ + +G + ++M+
Sbjct: 575 GCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAF 634
Query: 286 EPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+P V +VD+ A+ G ++++ L + ++ +
Sbjct: 635 DPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 21/262 (8%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL-- 76
L D+ ++++ + K AR LFD MPVRDV WN M+ YV +G A +E+
Sbjct: 153 LQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMG---AGDEVLG 209
Query: 77 ----FERMPDR-DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR--------NVVSWNSML 123
F R R D VS ++ G + LE + +V WN L
Sbjct: 210 LFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTL 269
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEA-TLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ +++A WE + F +M++S VP ++ T + +L+ A L L +G +H +
Sbjct: 270 SSYLQAGEGWEAVDCFRDMIKS--RVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFG 327
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
V ++ + MYVK G+++ AR +F +M +++SWN++I G G E +L LF+
Sbjct: 328 WDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFI 387
Query: 243 EMEKKGPKPNDATFVCVLSACT 264
++ + G P+ T VL AC+
Sbjct: 388 DLLRSGLLPDQFTITSVLRACS 409
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA--RNVVSWNSMLALHVRAKSFWECLKM 138
PDR V N +I + G++ A + F+ P R++V++N++LA + + K
Sbjct: 46 PDRYVT--NNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKT 103
Query: 139 FD-----EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
+ ++ + TL + C G S + + ++ DV ++ L
Sbjct: 104 HEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGAL 163
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
+ +Y K + AR +FD MPVR+VV WN M+ Y G G++ L LF + G +P+
Sbjct: 164 VNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD 222
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 227/438 (51%), Gaps = 10/438 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+YS G++ +A LLF + DL S+N+M+ G + A +LF M R D
Sbjct: 443 VYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQIT 502
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ + L+ ++ + D+ + ++D ++ G + A + FN++P
Sbjct: 503 FANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP 562
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ + V+W ++++ V + L + +M +G P+E T +++ AC+ L L G
Sbjct: 563 SPDDVAWTTVISGCVENGEEEQALFTYHQMRLAG-VQPDEYTFATLVKACSLLTALEQGK 621
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H+ I N D + T L+ MY KCG ++ A +F M R+V WN+MI+G HG
Sbjct: 622 QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHG 681
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
N E+AL F EM+ +G P+ TF+ VLSAC+H+G+ + + FD M++ Y +EP++EHY
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHY 741
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VD L+RAG ++ +E+++ + + C D E GE VA++L ++
Sbjct: 742 SCLVDALSRAGHIQEAEKVVSSMPFE-ASATMYRTLLNACRVQGDKETGERVAEKLFTMD 800
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P D Y++LSN YAA +W++ R M++ ++KE S + +++ + + S
Sbjct: 801 PSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSH 860
Query: 413 HRKRIMYSMLSELGAHIK 430
++Y+ + + IK
Sbjct: 861 EETDLIYNKVEYVMKRIK 878
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 153/333 (45%), Gaps = 44/333 (13%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF------ERM 80
NS I+ +VK G AR++F +M D+ +WN +I+G G E + LF +
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 81 PDR----------------------------------DVVSWNCMIDGCVRVGNVPLALE 106
PD+ D +ID + G + A
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAEL 455
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+ ++ SWN+M+ + ++ E L++F M E GE ++ T + A L
Sbjct: 456 LFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKA-DQITFANAAKAAGCLV 514
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
+L G +H+ + D+ + + +L MY+KCG M AR VF+++P + V+W ++I
Sbjct: 515 RLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVIS 574
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG-WWYFDLMRRVYNI 285
G +G E+AL + +M G +P++ TF ++ AC+ + +G + ++M+
Sbjct: 575 GCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAF 634
Query: 286 EPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+P V +VD+ A+ G ++++ L + ++ +
Sbjct: 635 DPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 21/262 (8%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL-- 76
L D+ ++++ + K AR LFD MPVRDV WN M+ YV +G A +E+
Sbjct: 153 LQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMG---AGDEVLG 209
Query: 77 ----FERMPDR-DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR--------NVVSWNSML 123
F R R D VS ++ G + LE + +V WN L
Sbjct: 210 LFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTL 269
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEA-TLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ +++A WE + F +M++S VP ++ T + +L+ A L L +G +H +
Sbjct: 270 SSYLQAGEGWEAVDCFRDMIKS--RVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFG 327
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
V ++ + MYVK G+++ AR +F +M +++SWN++I G G E +L LF+
Sbjct: 328 WDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFI 387
Query: 243 EMEKKGPKPNDATFVCVLSACT 264
++ + G P+ T VL AC+
Sbjct: 388 DLLRSGLLPDQFTITSVLRACS 409
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA--RNVVSWNSMLALHVRAKSFWECLKM 138
PDR V N +I + G++ A + F+ P R++V++N++LA + + K
Sbjct: 46 PDRYVT--NNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKT 103
Query: 139 FD-----EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
+ ++ + TL + C G S + + ++ DV ++ L
Sbjct: 104 HEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGAL 163
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
+ +Y K + AR +FD MPVR+VV WN M+ Y G G++ L LF + G +P+
Sbjct: 164 VNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD 222
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 227/438 (51%), Gaps = 10/438 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+YS G++ +A LLF + DL S+N+M+ G + A +LF M R D
Sbjct: 443 VYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQIT 502
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ + L+ ++ + D+ + ++D ++ G + A + FN++P
Sbjct: 503 FANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP 562
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ + V+W ++++ V + L + +M +G P+E T +++ AC+ L L G
Sbjct: 563 SPDDVAWTTVISGCVENGEEEQALFTYHQMRLAG-VQPDEYTFATLVKACSLLTALEQGK 621
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H+ I N D + T L+ MY KCG ++ A +F M R+V WN+MI+G HG
Sbjct: 622 QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHG 681
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
N E+AL F EM+ +G P+ TF+ VLSAC+H+G+ + + FD M++ Y +EP++EHY
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHY 741
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C+VD L+RAG ++ +E+++ + + C D E GE VA++L ++
Sbjct: 742 SCLVDALSRAGHIQEAEKVVSSMPFE-ASATMYRTLLNACRVQGDKETGERVAEKLFTMD 800
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P D Y++LSN YAA +W++ R M++ ++KE S + +++ + + S
Sbjct: 801 PSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSH 860
Query: 413 HRKRIMYSMLSELGAHIK 430
++Y+ + + IK
Sbjct: 861 EETDLIYNKVEYVMKRIK 878
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 153/333 (45%), Gaps = 44/333 (13%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF------ERM 80
NS I+ +VK G AR++F +M D+ +WN +I+G G E + LF +
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 81 PDR----------------------------------DVVSWNCMIDGCVRVGNVPLALE 106
PD+ D +ID + G + A
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAEL 455
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+ ++ SWN+M+ + ++ E L++F M E GE ++ T + A L
Sbjct: 456 LFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKA-DQITFANAAKAAGCLV 514
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
+L G +H+ + D+ + + +L MY+KCG M AR VF+++P + V+W ++I
Sbjct: 515 RLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVIS 574
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG-WWYFDLMRRVYNI 285
G +G E+AL + +M G +P++ TF ++ AC+ + +G + ++M+
Sbjct: 575 GCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAF 634
Query: 286 EPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+P V +VD+ A+ G ++++ L + ++ +
Sbjct: 635 DPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 21/262 (8%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL-- 76
L D+ ++++ + K AR LFD MPVRDV WN M+ YV +G A +E+
Sbjct: 153 LQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMG---AGDEVLG 209
Query: 77 ----FERMPDR-DVVSWNCMIDGCVRVGNVPLALEFFNRMPAR--------NVVSWNSML 123
F R R D VS ++ G + LE + +V WN L
Sbjct: 210 LFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTL 269
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEA-TLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ +++A WE + F +M++S VP ++ T + +L+ A L L +G +H +
Sbjct: 270 SSYLQAGEGWEAVDCFRDMIKS--RVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFG 327
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
V ++ + MYVK G+++ AR +F +M +++SWN++I G G E +L LF+
Sbjct: 328 WDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFI 387
Query: 243 EMEKKGPKPNDATFVCVLSACT 264
++ + G P+ T VL AC+
Sbjct: 388 DLLRSGLLPDQFTITSVLRACS 409
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 81 PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA--RNVVSWNSMLALHVRAKSFWECLKM 138
PDR V N +I + G++ A + F+ P R++V++N++LA + + K
Sbjct: 46 PDRYVT--NNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKT 103
Query: 139 FD-----EMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
+ ++ + TL + C G S + + ++ DV ++ L
Sbjct: 104 HEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGAL 163
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
+ +Y K + AR +FD MPVR+VV WN M+ Y G G++ L LF + G +P+
Sbjct: 164 VNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD 222
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 227/450 (50%), Gaps = 30/450 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDE---MPVRDVWNW 57
MYS V + +FD L D VS+N++I V+NG FDE M V ++
Sbjct: 369 MYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNG--------FDEEALMLVCEMQKQ 420
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSW------------NCMIDGCVRVGNVPLAL 105
+I A L AA+ L + ++ + +ID + G++ A
Sbjct: 421 KFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESYLIDMYAKSGSIRTAE 480
Query: 106 EFF--NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
F N R+ +WN+++A + + + + + +M+ +PN TL S+L AC+
Sbjct: 481 LLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQN-VIPNAVTLASILPACS 539
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
+G + + +H F ++ +V + T L Y KCGA+ A +VF P +N V++ +
Sbjct: 540 SMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTT 599
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
M+M YG HG G++AL L+ M + G +P+ TFV +LSAC ++G+V EG F+ M +V+
Sbjct: 600 MMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVH 659
Query: 284 NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEI 343
I+P +EHY C+ D+L R G V + E +K + C H ELG+
Sbjct: 660 KIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFELGKA 719
Query: 344 VAKRLIELEPMD---IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLED 400
VAK+L+ + MD G +++LSN YA +G W+ V+RVR ++EKGL KE S V +
Sbjct: 720 VAKKLLNM-GMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWVEIAG 778
Query: 401 FESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
F + + ++ + +Y ML L +K
Sbjct: 779 FVNCFVSRDEKHPQSSEIYYMLDMLTLDMK 808
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 46/332 (13%)
Query: 24 VSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDR 83
+ YNS+++ + + + A +FD M R+V WN +I +V + A E F M ++
Sbjct: 157 IVYNSLLNMYA-SCQHEYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQ 215
Query: 84 DVVSWNC-------------------MIDGCVR----------------------VGNVP 102
V+ M G +R VG +
Sbjct: 216 SVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMD 275
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
A F+R +N WN+M+ +V+ E + +F + +ES E V ++ TL+SVLTA
Sbjct: 276 YARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAV 335
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
+ L ++ + H+F+ + +++ ++ MY +C +D + VFD+M R+ VSWN
Sbjct: 336 SQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWN 395
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG-WWYFDLMRR 281
++I + +G E+AL L EM+K+ + T +LSA ++ + G + L+RR
Sbjct: 396 TIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRR 455
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
E +E Y ++D+ A++G ++ +E L +
Sbjct: 456 GIQFE-GMESY--LIDMYAKSGSIRTAELLFE 484
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 138/278 (49%), Gaps = 13/278 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLF-----DEMPVRDVW 55
M+S G + AR++FD L + +N+MI +V+N A +F E V D
Sbjct: 267 MFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDV 326
Query: 56 NWNCMIAGYVAVGDLEAANE----LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
++ + ++ A + + + +P ++ N ++ R +V +L+ F++M
Sbjct: 327 TLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKM 386
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
R+ VSWN++++ V+ E L + E M+ + + + T ++L+A ++L L VG
Sbjct: 387 LERDAVSWNTIISAFVQNGFDEEALMLVCE-MQKQKFLIDSVTATALLSAASNLRNLYVG 445
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE--MPVRNVVSWNSMIMGYG 229
H+++ I+ + + S L+ MY K G++ A +F++ R+ +WN++I GY
Sbjct: 446 KQTHAYLIRRGIQFEGMESY-LIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYT 504
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
+G EKA+ L +M + PN T +L AC+ G
Sbjct: 505 QNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMG 542
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGE-AVPNEATL 155
R G LAL + +P + V WNS++ + + L ++ +M + + + T
Sbjct: 61 REGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTF 120
Query: 156 VSVLTACAHLGKLSVGMWVHS-FIKSN---NIKVDVLLSTCLLTMYVKCGAMDLARDVFD 211
S L ACA + G +HS F++S+ N ++ LL MY C + A +VFD
Sbjct: 121 SSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASC-QHEYALNVFD 179
Query: 212 EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
M RNVV+WN++I+ + +A+E F M + P+ TFV + A + G
Sbjct: 180 VMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRT 239
Query: 272 GWWYFDLMRR 281
++ MR+
Sbjct: 240 VKMFYGFMRK 249
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/427 (32%), Positives = 208/427 (48%), Gaps = 41/427 (9%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ GR+SDAR +FD+ + V +NS+I G+V NGE A LF++M VW +
Sbjct: 239 YANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAV 298
Query: 62 AGYVAVGDLEAANELFERMPDR-------------------------------------- 83
A +++ EL ++M D
Sbjct: 299 ANILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKV 358
Query: 84 -DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
D + N MI G V A E FN MP + ++SWNS+L + E L F M
Sbjct: 359 YDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTF-SM 417
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
M + ++ + SV++ACA L +G + + ++ D ++ T L+ Y KCG
Sbjct: 418 MNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGL 477
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+++ R VFD M + VSWN+M+MGY +G G +AL LF EM G +P+ TF +LSA
Sbjct: 478 VEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSA 537
Query: 263 CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXX 322
C H G+V EG F M+ Y+I P +EHY C+VDL AR G + LI+ + +
Sbjct: 538 CDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEMPFQ-ADA 596
Query: 323 XXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMI 382
C +H + +G++ A+++I+L+P + G YI LSN A W+ VR ++
Sbjct: 597 NMWLSVLRGCVSHGNKTIGKMAAEKIIQLDPGNSGAYIQLSNILATSEDWEGSAEVRELM 656
Query: 383 REKGLQK 389
R K +QK
Sbjct: 657 RNKNVQK 663
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 133/288 (46%), Gaps = 40/288 (13%)
Query: 1 MYSVFGRVSDAR-----LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW 55
++SV + +AR LL +L +++ N ++ + + G A KLFDEMP + +
Sbjct: 3 LHSVCRTIREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPF 62
Query: 56 NWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARN 115
+WN +I ++ +G + ELF MP + SWN ++ + G++ A FN MP +N
Sbjct: 63 SWNTLIEAHINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKN 122
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEM-MESGEAVPNEA-TLVSVLTACAHLGKLSVGMW 173
+ WNSM+ + R L +F EM ++ E V +A L +V ACA L L G
Sbjct: 123 PLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCGKQ 182
Query: 174 VHS--FIKSNNIKVDVLLSTCLLTMYVKCGAMDL-------------------------- 205
VH+ FI + D +L + ++ Y KCG +D
Sbjct: 183 VHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANA 242
Query: 206 -----ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
AR VFD V WNS+I GY +G +AL LF +M + G
Sbjct: 243 GRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNG 290
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 146/314 (46%), Gaps = 27/314 (8%)
Query: 6 GRVSDARLLFDS-SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGY 64
G+ AR+ D D V +S+++ + K G+ +A ++ + D ++ + +++GY
Sbjct: 180 GKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGY 239
Query: 65 VAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWN---- 120
G + A ++F+ D V WN +I G V G AL FN+M RN V W
Sbjct: 240 ANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKM-RRNGV-WGDFSA 297
Query: 121 --SMLALHVRAKSFWECLKMFDEMMESGEA--VPNEATLVSVLTACAHLGKLSVGMWVHS 176
++L++ + +M D + G + +TL+ + C H H
Sbjct: 298 VANILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQH---------PHD 348
Query: 177 FIK-SNNIKV-DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
K + +KV D +L ++T+Y CG ++ A++VF+ MP + ++SWNS+++G +
Sbjct: 349 SCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACP 408
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC 294
+AL+ F M K K + +F V+SAC + G F + + + + C
Sbjct: 409 SEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFG---KAITLGLESDQIIC 465
Query: 295 --IVDLLARAGLVK 306
+VD + GLV+
Sbjct: 466 TSLVDFYCKCGLVE 479
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 14/258 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
+Y GRV DA+ +F+S L+S+NS++ G +N A F M DV ++
Sbjct: 370 VYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFS 429
Query: 57 WNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ +I+ LE +LF + + D + ++D + G V + + F+ M
Sbjct: 430 FASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMI 489
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ VSWN+ML + E L +F+EM SG P+ T +L+AC H G + G
Sbjct: 490 KTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSG-VRPSAITFTGILSACDHCGLVEEGR 548
Query: 173 WVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGL 230
+ +K + +I + +C++ ++ + G A + +EMP + + W S++ G
Sbjct: 549 DLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEMPFQADANMWLSVLRGCVS 608
Query: 231 HGN---GEKALELFLEME 245
HGN G+ A E ++++
Sbjct: 609 HGNKTIGKMAAEKIIQLD 626
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/472 (30%), Positives = 231/472 (48%), Gaps = 47/472 (9%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV----AVG 68
L + D+ S D + K G G A +FDEMP R++ WN I+ V ++
Sbjct: 133 LALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLD 192
Query: 69 DLEAANELFERMPDRDVVSWNCMIDGCV-------------------------------- 96
+ A E + + +++ ++ CV
Sbjct: 193 AIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLID 252
Query: 97 ---RVGNVPLALEFFNRMPAR-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
+ G++ A FNR+ R NVVSW SMLA V+ +F + E P +
Sbjct: 253 FYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVF--LQARKEVEPTD 310
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
+ SVL+ACA LG L +G VH+ ++ ++ + + L+ MY KCG+++ A VF E
Sbjct: 311 FMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSE 370
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEME--KKGPKPNDATFVCVLSACTHAGMVM 270
+P RN+V+WN+MI GY G+ + AL LF EM G +P+ T + +LS C+ G V
Sbjct: 371 LPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVE 430
Query: 271 EGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXX 330
G F+ MR Y IEP EH+ C+VDLL R+GLV + E I+ ++++
Sbjct: 431 RGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQ-PTISVWGALLG 489
Query: 331 XCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKE 390
C H +ELG+I A++L EL+ +D G +++LSN A+ GRW++ VR +++ G++K
Sbjct: 490 ACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKN 549
Query: 391 AASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSIEKDNF 442
S + +++ + K+ S R + +ML +L +K AG + N
Sbjct: 550 VGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMK--EAGYVPDTNL 599
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 1/150 (0%)
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
R VV+W S+++ V + F L F M PN+ T V A A + G
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRD-NVQPNDFTFPCVFKASAFVQIPMTGKQ 129
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+H + DV + MY K G A ++FDEMP RN+ +WN+ I
Sbjct: 130 IHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRR 189
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSAC 263
A+ F E +PN TF L+AC
Sbjct: 190 SLDAIVAFKEFLCVHGEPNSITFCAFLNAC 219
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 157 SVLTACAHLGKLSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
+V T C+ LG+ +H+ I+++ + LS L+ MY K ++ A+ V +
Sbjct: 16 AVSTHCSILGRT-----IHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHL 70
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
R VV+W S+I G + AL F M + +PND TF CV A + M G
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTG 127
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 237/473 (50%), Gaps = 45/473 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
YS FG +++A LFD + +S N MI +++ G A+ LFDEM R+V WN M
Sbjct: 116 FYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAM 175
Query: 61 IAGYVAVGDLEAANELFERM------PDRDVVSWNCMIDGC------------------- 95
+ G V G E A LF RM PD S+ ++ GC
Sbjct: 176 VTGLVKFGLNEEALLLFSRMNVLGFVPDE--YSFGSVLRGCAHLRALFVGEQVHAYVAKC 233
Query: 96 ----------------VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMF 139
++ G++ MP N+V+WN+++A + + F L +
Sbjct: 234 GFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHY 293
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
MM+ P++ T VSV+++C+ L L G +H+ + V + + L++MY K
Sbjct: 294 C-MMKMAGYRPDKITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVSVISSLVSMYSK 352
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCV 259
CG++ + F E R+VV W+SMI YG HG EKA++LF + EK+ N+ TF+ +
Sbjct: 353 CGSLQDSIKAFLECEERDVVIWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSL 412
Query: 260 LSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKX 319
L AC+H+G+ +G +FD+M Y ++ ++EHY C+VDLL R+G ++ +E +I+ + V
Sbjct: 413 LYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAETMIRSMPVS- 471
Query: 320 XXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVR 379
C H + E+ VA+ ++ ++P D Y++++ +A+ RW +V VR
Sbjct: 472 ADAIIWKTLLSACKIHKNEEMARRVAEEVLRIDPQDPASYVLIAGIHASAKRWQNVSEVR 531
Query: 380 VMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLS 432
+++K ++KE S V +++ ++ + S + + L EL + +K+
Sbjct: 532 RAMKDKMVKKEPGVSWVEVKNQVHQFHTGDKSHPKFVEINQYLEELTSEMKMQ 584
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 130/260 (50%), Gaps = 32/260 (12%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+F S + D N +++ + K GE A KLFD MP R+ + N MI Y+ +G++E
Sbjct: 97 LIFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIEN 156
Query: 73 ANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSF 132
A LF+ M +R+V +WN M+ G V+ G AL F+RM NV+ +
Sbjct: 157 AKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSRM---NVLGF------------- 200
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
VP+E + SVL CAHL L VG VH+++ + + ++
Sbjct: 201 ----------------VPDEYSFGSVLRGCAHLRALFVGEQVHAYVAKCGFEFNSVVGCS 244
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
L MY+K G++ + MP N+V+WN+++ G + E L+ + M+ G +P+
Sbjct: 245 LAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPD 304
Query: 253 DATFVCVLSACTHAGMVMEG 272
TFV V+S+C+ + +G
Sbjct: 305 KITFVSVISSCSELATLCQG 324
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 151 NEATLVSVL-TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
E L S+L +C +S+G +HS I ++ D +S LL Y K G ++ A +
Sbjct: 70 TEPRLFSILIQSCIPTNSVSLGKQLHSLIFTSGCSSDKFISNHLLNFYSKFGELNNAVKL 129
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
FD MP RN +S N MI Y GN E A LF EM ++ N AT+ +++ G+
Sbjct: 130 FDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTER----NVATWNAMVTGLVKFGLN 185
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
E F M V P +G ++ A + E++ YV+
Sbjct: 186 EEALLLFSRM-NVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAYVA 231
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 225/429 (52%), Gaps = 11/429 (2%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRD----VWNWNCMIAGYV 65
+ARL+F+ T + VS+ ++I G+ + ++F +M + + ++++ ++
Sbjct: 162 NARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACA 221
Query: 66 AVGDLEAANELFERMPDRDVVS----WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNS 121
++G ++ + + S N ++D R A + F M ++ ++WN+
Sbjct: 222 SIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNT 281
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
++A S+ E L +F +M+ G + PN T SV+ ACA+L L G +H I
Sbjct: 282 LIAGFETLDSY-ESLCIFSQMVSEGFS-PNCFTFTSVIAACANLAILYCGQQLHGGIIHR 339
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
+ ++ LS L+ MY KCG + + +F M N+VSW SM++GYG HG+G++A++LF
Sbjct: 340 GLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLF 399
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
EM G KP+ F+ VLSAC+HAG+V EG YF LM YN+ P + Y C+VDLL+R
Sbjct: 400 NEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSR 459
Query: 302 AGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIM 361
AG VK + ELI+ + K C + + ++ A +++E++P G Y++
Sbjct: 460 AGRVKEAYELIENMPFK-PDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVL 518
Query: 362 LSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSM 421
LSN AA+G W D +R ++R +KE S + L++ + V + + + +
Sbjct: 519 LSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEVCEV 578
Query: 422 LSELGAHIK 430
L L H+K
Sbjct: 579 LELLIRHMK 587
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
G+ A F+ MP R+V++W SM+ + +F M+ G PN T+ +V
Sbjct: 55 GSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG-VKPNAFTVSAV 113
Query: 159 LTACAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKC-GAMDLARDVFDEMPVR 216
L AC L L G VH IK + + L+ MY C +MD AR VF+++ +
Sbjct: 114 LKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTK 173
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
N VSW ++I GY + L +F +M + + + +F +SAC G
Sbjct: 174 NAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIG 224
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 189 LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
L+T L+ Y G+ + A +FDEMP R+V++W SMI GY + +A +F M + G
Sbjct: 43 LTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG 102
Query: 249 PKPNDATFVCVLSAC 263
KPN T VL AC
Sbjct: 103 VKPNAFTVSAVLKAC 117
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 231/442 (52%), Gaps = 40/442 (9%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVA-VGDLEAANELFERMPDR-- 83
NS+ID + K F+ MP +D+ +W +IAGY L+A N L + ++
Sbjct: 391 NSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMD 450
Query: 84 -----------------------------------DVVSWNCMIDGCVRVGNVPLALEFF 108
D++ N +++ + V A F
Sbjct: 451 VDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVF 510
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
+ ++++VSW SM+ V E L++F+ ++E+ P+ TLVSVL A A L L
Sbjct: 511 ESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETN-IEPDLITLVSVLYAAAALSSL 569
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
G +H F+ ++ L++ L+ MY +CG M+ AR++F+ + R+++ W SMI
Sbjct: 570 KKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINAN 629
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
G+HG G+ A++LF +M + P+ TF+ +L AC+H+G+V+EG +F++M+ Y +EP
Sbjct: 630 GMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPW 689
Query: 289 VEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRL 348
EHY C+VDLLAR+ ++ + ++ + ++ C H +++LGE+ AK+L
Sbjct: 690 PEHYACLVDLLARSNSLEEAYHFVRNMPIE-PSAEVWCALLGACRIHSNNDLGEVAAKKL 748
Query: 349 IELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVK 408
++L + G Y+++SNT+AA GRW+DVE VR +++ L+K+ S + +E+ + +
Sbjct: 749 LQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMAR 808
Query: 409 NYSVHRKRIMYSMLSELGAHIK 430
+ S + +Y L++ +K
Sbjct: 809 DKSHPQCNNIYLKLAQFTKLLK 830
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 159/382 (41%), Gaps = 56/382 (14%)
Query: 35 KNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNC 90
K G A K+FD+M R ++ WN MI V+ G A EL++ M D ++ C
Sbjct: 94 KCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPC 153
Query: 91 MIDGC-----------------------------------VRVGNVPLALEFFNR--MPA 113
++ C + G++ A F+ M
Sbjct: 154 VLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEK 213
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
+ VSWNS+++ HV E L +F M E G N T VS L AC + +G
Sbjct: 214 DDPVSWNSIISAHVGEGESLEALSLFRRMQEVG-VESNTYTFVSALQACEGPTFIKIGRG 272
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+H+ I +N DV +S L+ MY CG M+ A VF M ++ VSWN+++ G +
Sbjct: 273 IHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDM 332
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE--- 290
A+ F +M+ G KP+ + + +++A + ++ G + Y I+ ++
Sbjct: 333 YSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAG-----MEVHAYAIKHGIDSNM 387
Query: 291 HYG-CIVDLLARAGLVKNSEELIKYVSVKXXXX-XXXXXXXXXCTTHMDSELGEIVAKRL 348
H G ++D+ + VK +Y+ K H+D+ + R
Sbjct: 388 HIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDA----LNLLRK 443
Query: 349 IELEPMDIGPYIMLSNTYAAQG 370
++LE MD+ P ++ S A G
Sbjct: 444 VQLEKMDVDPMMIGSILLACSG 465
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS-FIKSNNIKVDVL 188
++F F + + + P + L CA L G +H+ F+K+ N V
Sbjct: 24 EAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVF 83
Query: 189 LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
L T + MY KCG+ A VFD+M R + +WN+MI G +A+EL+ EM G
Sbjct: 84 LDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLG 143
Query: 249 PKPNDATFVCVLSAC 263
+ TF CVL AC
Sbjct: 144 VSLDAFTFPCVLKAC 158
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 16/258 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y V AR +F+S + D+VS+ SMI V NG A +LF+ + D+
Sbjct: 496 VYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLIT 555
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
++ A+ L+ E+ + + + + N ++D R G + A FN +
Sbjct: 556 LVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVK 615
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+++ W SM+ + + + +F +M + +P+ T +++L AC+H G + G
Sbjct: 616 QRDLILWTSMINANGMHGCGKDAIDLFSKMTDEN-VLPDHITFLALLYACSHSGLVVEGK 674
Query: 173 WVHSFIKSNNIKVDVLLS--TCLLTMYVKCGAMDLARDVFDEMPVRNVVS-WNSMIMGYG 229
H I N K++ CL+ + + +++ A MP+ W +++
Sbjct: 675 Q-HFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACR 733
Query: 230 LHGN---GEKALELFLEM 244
+H N GE A + L++
Sbjct: 734 IHSNNDLGEVAAKKLLQL 751
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 137/433 (31%), Positives = 212/433 (48%), Gaps = 46/433 (10%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV----RDVWN 56
MY FG++ AR LFD D VS+N+MI + G A +LF M R++
Sbjct: 237 MYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIII 296
Query: 57 WNCMIAGYVAVGDLEAANELFERMP---DRDVVSWNCMIDGCVRVGNVPLALE------- 106
WN + G + G+ + A +LF +M D V+ ++ C +G V L E
Sbjct: 297 WNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVR 356
Query: 107 ----------------------------FFNRMPARNVVSWNSMLALHVRAKSFWECLKM 138
F ++ + +++WN+ML+ E +
Sbjct: 357 TCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFL 416
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI--KSNNIKVDVLLSTCLLTM 196
EM+ G PN T+ S+L CA + L G H ++ + K +LL L+ M
Sbjct: 417 LREMLREG-VEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEM 475
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
Y + G + AR VFD + ++ V++ SMIMGYG+ G+GE AL+LF EM + KP+ T
Sbjct: 476 YSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTM 535
Query: 257 VCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
V VL AC+H+G+V +G F M VY I+P+VEHY C+VDL RAGL+ ++E+I +S
Sbjct: 536 VAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMS 595
Query: 317 VKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVE 376
K C H ++ +GE A +L+E++P G Y++++N YAA R D
Sbjct: 596 CK-PTSAIWATLIGACKIHGNTVIGEWAAGKLLEMKPDHSGYYLLIANMYAAANRLDKEA 654
Query: 377 RVRVMIREKGLQK 389
R +R+ G ++
Sbjct: 655 EARTYMRDSGAKR 667
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
WN +++L+V+ F + + ++ M+ G +P++ T SVL AC L G+ VH I
Sbjct: 161 WNMVISLYVKNCLFEDAISVYRRMLSKG-VIPDDYTYPSVLKACGELLDYDSGVAVHKAI 219
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+ ++IK + + L+ MY + G +++AR++FD MP R+ VSWN+MI Y G ++A
Sbjct: 220 QESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAF 279
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
LF M + G + N + + C H G F MR V ++
Sbjct: 280 RLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLD 327
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 163/362 (45%), Gaps = 46/362 (12%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKN----GETGAARKLFDEMPVRDVWN 56
Y+ ++DA+++ + S + D + +N +I +VKN R++ + + D +
Sbjct: 136 FYASVDLLADAQIVAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYT 195
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCV-----RVGNVPLALEFFNRM 111
+ ++ + D ++ + + + + + W+ + + R G + +A E F+ M
Sbjct: 196 YPSVLKACGELLDYDSGVAVHKAIQESSI-KWSLFVHNALVFMYGRFGKLEVARELFDIM 254
Query: 112 PARNVVSWNSMLALHVRAKSFW-ECLKMFDEMMESG------------------------ 146
PAR+ VSWN+M++ + ++ W E ++F M E+G
Sbjct: 255 PARDDVSWNTMISCYA-SRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGA 313
Query: 147 -------EAVP--NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
AV + +V L AC+H+G + +G +H V + L+TMY
Sbjct: 314 LKLFSQMRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMY 373
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
+C ++ A +F ++ + +++WN+M+ G+ E+ L EM ++G +PN T
Sbjct: 374 SRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIA 433
Query: 258 CVLSACTHAGMVMEGW-WYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
+L C + G ++ +++R + + + +V++ +R+G V + ++ +S
Sbjct: 434 SILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLS 493
Query: 317 VK 318
K
Sbjct: 494 RK 495
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/423 (31%), Positives = 220/423 (52%), Gaps = 42/423 (9%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------PD------------- 82
AR LFD++P ++++ WN +I GY G + A L+ +M PD
Sbjct: 101 ARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSA 160
Query: 83 --------------------RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
RD+ +ID + G V A F+++ R+ V WNSM
Sbjct: 161 LSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSM 220
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
LA + + E + + EM +G P EATLV+V+++ A + L G +H F +
Sbjct: 221 LAAYAQNGHPDESISLCREMAANG-VRPTEATLVTVISSSADVACLPYGREIHGFGWRHG 279
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
+ + + T L+ MY KCG++ +A +F+ + + VVSWN++I GY +HG AL+LF
Sbjct: 280 FQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFD 339
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
+M K+ +P+ TFV VL+AC+ ++ EG ++LM R Y I P V+HY C++DLL
Sbjct: 340 KMRKE-DRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHC 398
Query: 303 GLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIML 362
G + + +LI+ +SVK C H + EL E+ ++LIELEP D G Y++L
Sbjct: 399 GQLDEAYDLIRNMSVK-PDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVIL 457
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSML 422
+N YA G+W+ VE++R ++ +K ++K A S + +++ + + S +Y+ L
Sbjct: 458 ANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAEL 517
Query: 423 SEL 425
L
Sbjct: 518 KRL 520
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 129 AKSFWECLKMFDEMMESGEAVPNEAT----LVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
++SF+ L S ++ P + T S+L +C L+ G +H+ I
Sbjct: 22 SQSFYHSLAT--HQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIA 79
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
+ L+T L+ +Y ++ AR++FD++P +N+ WN +I GY +G + A+ L+ +M
Sbjct: 80 YNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKM 139
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEG 272
G +P++ T VL AC+ + EG
Sbjct: 140 LDYGLRPDNFTLPFVLKACSALSAIGEG 167
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 234/471 (49%), Gaps = 49/471 (10%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS G +S AR +FD ++V YN++I G ++ G +++LF EM RD +W M
Sbjct: 187 MYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSM 246
Query: 61 IAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGC--------------------- 95
I G+ G A ++F M D ++ ++ C
Sbjct: 247 ITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 306
Query: 96 --------------VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+ N+ A F +M +NVVSW +ML + + E +K F +
Sbjct: 307 KDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 366
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M + G P++ TL SV+++CA+L L G H+ ++ + + +S L+T+Y KCG
Sbjct: 367 MQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCG 425
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+++ + +F+E+ ++ V+W +++ GY G + + LF M G KP+ TF+ VLS
Sbjct: 426 SIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLS 485
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC+ AG+V +G F+ M + I P +HY C++DL +RAG ++ + I +
Sbjct: 486 ACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFS-PD 544
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
C + + ++G+ A+ L+EL+P + Y++LS+ YAA+G+W++V R+R
Sbjct: 545 AISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKD 604
Query: 382 IREKGLQKEAASS------VVHL--EDFESKYFVKNYSVHRKRIMYSMLSE 424
+R+KGL+KE S VH+ D +S F +++ Y M+ E
Sbjct: 605 MRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKE 655
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 33/290 (11%)
Query: 29 MIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSW 88
++D + K G ARK+FDE+P ++V +N +I G + G +E + LF M +RD +SW
Sbjct: 184 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 243
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
MI G + G A++ F M N L+M
Sbjct: 244 TSMITGFTQNGLDRDAIDIFREMKLEN--------------------LQM---------- 273
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
++ T SVLTAC + L G VH++I + K ++ +++ L+ MY KC + A
Sbjct: 274 --DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEA 331
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
VF +M +NVVSW +M++GYG +G E+A++ F +M+K G +P+D T V+S+C +
Sbjct: 332 VFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLAS 391
Query: 269 VMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ EG F + + +V L + G +++S L +S K
Sbjct: 392 LEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK 440
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 144/306 (47%), Gaps = 33/306 (10%)
Query: 45 LFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLA 104
+ +P + + N +I+ Y +G + A+++F++MP ++ SWN ++ ++G V
Sbjct: 35 IIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSKLGRVSEM 94
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES-GEAVPNEATLVSVLTACA 163
F+ MP R+ VSWNS+++ + ++ +K ++ M+++ G N T ++L +
Sbjct: 95 EYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILAS 154
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV---- 219
G + +G +H + V + + L+ MY K G + AR VFDE+P +NVV
Sbjct: 155 KRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNT 214
Query: 220 ---------------------------SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
SW SMI G+ +G A+++F EM+ + + +
Sbjct: 215 LIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMD 274
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
TF VL+AC + EG + R + + + +V++ + +K++E +
Sbjct: 275 QYTFGSVLTACGGVMALQEGKQVHAYIIRT-DYKDNIFVASALVEMYCKCKNIKSAEAVF 333
Query: 313 KYVSVK 318
K ++ K
Sbjct: 334 KKMTCK 339
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 234/471 (49%), Gaps = 49/471 (10%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS G +S AR +FD ++V YN++I G ++ G +++LF EM RD +W M
Sbjct: 187 MYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSM 246
Query: 61 IAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGC--------------------- 95
I G+ G A ++F M D ++ ++ C
Sbjct: 247 ITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 306
Query: 96 --------------VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+ N+ A F +M +NVVSW +ML + + E +K F +
Sbjct: 307 KDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 366
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M + G P++ TL SV+++CA+L L G H+ ++ + + +S L+T+Y KCG
Sbjct: 367 MQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCG 425
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+++ + +F+E+ ++ V+W +++ GY G + + LF M G KP+ TF+ VLS
Sbjct: 426 SIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLS 485
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC+ AG+V +G F+ M + I P +HY C++DL +RAG ++ + I +
Sbjct: 486 ACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFS-PD 544
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
C + + ++G+ A+ L+EL+P + Y++LS+ YAA+G+W++V R+R
Sbjct: 545 AISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKD 604
Query: 382 IREKGLQKEAASS------VVHL--EDFESKYFVKNYSVHRKRIMYSMLSE 424
+R+KGL+KE S VH+ D +S F +++ Y M+ E
Sbjct: 605 MRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKE 655
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 33/290 (11%)
Query: 29 MIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSW 88
++D + K G ARK+FDE+P ++V +N +I G + G +E + LF M +RD +SW
Sbjct: 184 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 243
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
MI G + G A++ F M N L+M
Sbjct: 244 TSMITGFTQNGLDRDAIDIFREMKLEN--------------------LQM---------- 273
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
++ T SVLTAC + L G VH++I + K ++ +++ L+ MY KC + A
Sbjct: 274 --DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEA 331
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
VF +M +NVVSW +M++GYG +G E+A++ F +M+K G +P+D T V+S+C +
Sbjct: 332 VFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLAS 391
Query: 269 VMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ EG F + + +V L + G +++S L +S K
Sbjct: 392 LEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK 440
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 144/306 (47%), Gaps = 33/306 (10%)
Query: 45 LFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLA 104
+ +P + + N +I+ Y +G + A+++F++MP ++ SWN ++ ++G V
Sbjct: 35 IIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSKLGRVSEM 94
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES-GEAVPNEATLVSVLTACA 163
F+ MP R+ VSWNS+++ + ++ +K ++ M+++ G N T ++L +
Sbjct: 95 EYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILAS 154
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV---- 219
G + +G +H + V + + L+ MY K G + AR VFDE+P +NVV
Sbjct: 155 KRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNT 214
Query: 220 ---------------------------SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
SW SMI G+ +G A+++F EM+ + + +
Sbjct: 215 LIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMD 274
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
TF VL+AC + EG + R + + + +V++ + +K++E +
Sbjct: 275 QYTFGSVLTACGGVMALQEGKQVHAYIIRT-DYKDNIFVASALVEMYCKCKNIKSAEAVF 333
Query: 313 KYVSVK 318
K ++ K
Sbjct: 334 KKMTCK 339
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 223/457 (48%), Gaps = 52/457 (11%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF--------- 77
N++++ +VK A+ +FD+MP R+V +W MI+ Y + A +L
Sbjct: 123 NTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVM 182
Query: 78 -------------ERMPD--------------RDVVSWNCMIDGCVRVGNVPLALEFFNR 110
ER+ D DV + +ID ++G + A+ F
Sbjct: 183 PNMYTFSSVLRACERLCDLKQVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFRE 242
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M + V WNS++A + E L ++ M G +++TL SVL AC L +
Sbjct: 243 MVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPA-DQSTLTSVLRACTGSSLLEL 301
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G VH + D++L+ LL MY KCG+++ A+ +F M V++V+SW++MI G
Sbjct: 302 GRQVHVHVL--KFDQDLILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQ 359
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
+G +AL LF M+ GP+PN T + VL AC+HAG+V EGW YF M+ +Y I+P E
Sbjct: 360 NGFSVEALNLFDSMKVSGPRPNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGRE 419
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIE 350
HY C++DLL RAG + +LI ++ + C + +L AK +++
Sbjct: 420 HYSCLLDLLGRAGKLDEMVKLIHEMTCE-PDVVTWRTLLDACRAQRNVDLATYAAKEILK 478
Query: 351 LEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNY 410
L+ D G Y++LSN YA RWDDV VR + +G++KE S + + + + V +
Sbjct: 479 LDQQDAGAYVLLSNIYANSKRWDDVAEVRRTMSARGIRKEPGCSWIEVNNQIHAFIVGDK 538
Query: 411 SVHRKRIMYSMLSELGAHI-----KLSPAGSIEKDNF 442
S + + E+ + KL+ AG + NF
Sbjct: 539 S-------HPQIDEINRKLDEYIRKLTDAGYVPDTNF 568
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 120/263 (45%), Gaps = 12/263 (4%)
Query: 18 SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN--------WNCMIAGYVAVGD 69
S ++ S + H N + A ++ D M R V+ C +A
Sbjct: 44 SFQPNIAPETSSLLNHCYNRDLPRAMQILDTMEKRGVFADAIAYSELIKCCLAHKAVREG 103
Query: 70 LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRA 129
N +F N +++ V++ + A F++MP RNVVSW +M++ + A
Sbjct: 104 KRVHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYA 163
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
K +K+ M+ G +PN T SVL AC L L VHS I ++ DV +
Sbjct: 164 KLNDRAMKLLVFMIRDG-VMPNMYTFSSVLRACERLCDLK---QVHSGILKAGLESDVFV 219
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP 249
+ L+ Y K G + A VF EM + V WNS+I + H +G++AL L+ M ++G
Sbjct: 220 RSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGF 279
Query: 250 KPNDATFVCVLSACTHAGMVMEG 272
+ +T VL ACT + ++ G
Sbjct: 280 PADQSTLTSVLRACTGSSLLELG 302
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 115 NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK-LSVGMW 173
N+ S L H + +++ D M + G V +A S L C K + G
Sbjct: 48 NIAPETSSLLNHCYNRDLPRAMQILDTMEKRG--VFADAIAYSELIKCCLAHKAVREGKR 105
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
VH+ I SN + L LL MYVK ++ A+ VFD+MP RNVVSW +MI Y
Sbjct: 106 VHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKL 165
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSAC--------THAGMVMEGWWYFDLMRRVYNI 285
++A++L + M + G PN TF VL AC H+G++ G L V+
Sbjct: 166 NDRAMKLLVFMIRDGVMPNMYTFSSVLRACERLCDLKQVHSGILKAG-----LESDVFVR 220
Query: 286 EPKVEHYGCIVDLLARAGLVK 306
++ Y + +LL G+ +
Sbjct: 221 SALIDAYSKLGELLEAVGVFR 241
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 214/443 (48%), Gaps = 47/443 (10%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM- 80
D V+Y +M+ VK+G+ R++FD M + +WN +++GY D A ELF +M
Sbjct: 351 DDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQ 410
Query: 81 -----PDR---------------------------------DVVSWNCMIDGCVRVGNVP 102
PDR DV + +I+ + G +
Sbjct: 411 FQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKME 470
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
++ F+++ +VV WNSM+A + L F M + G P+E + ++ ++C
Sbjct: 471 VSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFG-FFPSEFSFATIASSC 529
Query: 163 AHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWN 222
A L L G +H+ I + +V + + L+ MY KCG + AR FD MP +N+V+WN
Sbjct: 530 AKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWN 589
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
MI GY +G G +A+ L+ +M G KP+D TFV VL+AC+H+ +V EG F M +
Sbjct: 590 EMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQK 649
Query: 283 YNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGE 342
+ + PK++HY CI+D L R G E ++ + K C H + L +
Sbjct: 650 FEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYK-DDTIVWEVVLSSCRVHANVSLAK 708
Query: 343 IVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFE 402
A+ L L P + PY++L+N Y++ GRWDD + VR ++ + + K+ S E
Sbjct: 709 RAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGYSRS-----E 763
Query: 403 SKYFVKNYSVHRKRIMYSMLSEL 425
KY V+N + MYS L
Sbjct: 764 FKYDVQNKTSFFAN-MYSCFGNL 785
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 144/255 (56%), Gaps = 5/255 (1%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
DL NS++D + K G+ +A +F+ + V +WN MI+GY D E A E F+RM
Sbjct: 285 DLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQ 344
Query: 82 ----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
+ D V++ M+ CV+ G+V + + F+ M + +++SWN++L+ + ++ E ++
Sbjct: 345 CCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVE 404
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
+F +M + P+ TL +L++CA LG L G VH+ + DV +++ L+ +Y
Sbjct: 405 LFRKMQFQWQN-PDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVY 463
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
KCG M++++ VF ++ +VV WNSMI G+ ++ + AL F M + G P++ +F
Sbjct: 464 SKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFA 523
Query: 258 CVLSACTHAGMVMEG 272
+ S+C + +G
Sbjct: 524 TIASSCAKLSSLFQG 538
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 154/356 (43%), Gaps = 83/356 (23%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
++ AR+ F +L D N +ID + K + +A +FD++P ++++++N +++ +
Sbjct: 24 AKIIHARI-FRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKNIFSYNAILSAFC 82
Query: 66 AVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM-------PAR---- 114
+L+ A LF +MP+R+ VS N +I V+ G AL+ ++ M P+
Sbjct: 83 KSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSHITFA 142
Query: 115 -----------------------------NVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
N+ N++L ++ + + ++F+ ++E
Sbjct: 143 TVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEP 202
Query: 146 GEAV------------------------------PNEATLVSVLTACAH----------- 164
E + +L ++L CA
Sbjct: 203 NEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSR 262
Query: 165 -LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
L + G +H+ + + D+ L LL MY K G MD A +VF+ + +VVSWN
Sbjct: 263 GLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNI 322
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLM 279
MI GYG + EKALE F M+ G +P+D T++ +L+AC +G V G FD M
Sbjct: 323 MISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCM 378
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
L+++L +C LS +H+ I + D L L+ +Y KC + A VFD++P
Sbjct: 8 LINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIP 67
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
+N+ S+N+++ + N + A LFL+M P+ N + +++ G +
Sbjct: 68 HKNIFSYNAILSAFCKSNNLQYACRLFLQM----PERNTVSLNTIITTMVKNGYERQALD 123
Query: 275 YFDLMRRVYNIEP 287
+DLM +++P
Sbjct: 124 TYDLMMVYESVKP 136
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/439 (30%), Positives = 213/439 (48%), Gaps = 43/439 (9%)
Query: 33 HVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------PDR--- 83
+ K G A +FDEMP R+V +W MI+ Y G A LF +M P+
Sbjct: 85 YTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTF 144
Query: 84 ------------------------------DVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
V + ++D + G + A F +P
Sbjct: 145 ATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPE 204
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
R+VVS ++++ + + E L++F + G N T VLTA + L L +G
Sbjct: 205 RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMK-SNYVTYTGVLTALSGLAALDLGKQ 263
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
VH+ + + I V+L L+ MY KCG + +R +FD M R V+SWN+M++GY HG
Sbjct: 264 VHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGE 323
Query: 234 GEKALELFLEM-EKKGPKPNDATFVCVLSACTHAGMVMEGWWYF-DLMRRVYNIEPKVEH 291
G + L+LF M E+ KP+ T + VLS C+H G+ +G F D+ +EPK+EH
Sbjct: 324 GREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEH 383
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
YGC+VDLL R+G V+ + E IK + + C H + ++GE ++L+E+
Sbjct: 384 YGCVVDLLGRSGRVEEAFEFIKKMPFE-PTAAIWGSLLGACRVHSNVDIGEFAGQQLLEI 442
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYS 411
EP + G Y++LSN YA+ GRW+DV +R ++ +K + KE S + L+ + + S
Sbjct: 443 EPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRS 502
Query: 412 VHRKRIMYSMLSELGAHIK 430
R+ + + EL K
Sbjct: 503 HPRREEICMKVKELSTSFK 521
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 1/157 (0%)
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
++L C + G VH+ + V L T L+ +Y KC ++ A +VFDEMP R
Sbjct: 45 AILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPER 104
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
NVVSW +MI Y G +AL LFL+M + G +PN+ TF VL++CT + + G
Sbjct: 105 NVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILGRQIH 164
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
L+ ++ N E V ++D+ A+ G + + + +
Sbjct: 165 SLIIKL-NYEDHVFVGSSLLDMYAKDGKIHEARTVFE 200
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 234/471 (49%), Gaps = 49/471 (10%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS G +S AR +FD ++V YN++I G ++ G +++LF EM RD +W M
Sbjct: 196 MYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSM 255
Query: 61 IAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGC--------------------- 95
I G+ G A ++F M D ++ ++ C
Sbjct: 256 ITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDY 315
Query: 96 --------------VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+ N+ A F +M +NVVSW +ML + + E +K F +
Sbjct: 316 KDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 375
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M + G P++ TL SV+++CA+L L G H+ ++ + + +S L+T+Y KCG
Sbjct: 376 MQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCG 434
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+++ + +F+E+ ++ V+W +++ GY G + + LF M G KP+ TF+ VLS
Sbjct: 435 SIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLS 494
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC+ AG+V +G F+ M + I P +HY C++DL +RAG ++ + I +
Sbjct: 495 ACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFS-PD 553
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
C + + ++G+ A+ L+EL+P + Y++LS+ YAA+G+W++V R+R
Sbjct: 554 AISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKD 613
Query: 382 IREKGLQKEAASS------VVHL--EDFESKYFVKNYSVHRKRIMYSMLSE 424
+R+KGL+KE S VH+ D +S F +++ Y M+ E
Sbjct: 614 MRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKE 664
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 33/290 (11%)
Query: 29 MIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSW 88
++D + K G ARK+FDE+P ++V +N +I G + G +E + LF M +RD +SW
Sbjct: 193 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 252
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
MI G + G A++ F M N L+M
Sbjct: 253 TSMITGFTQNGLDRDAIDIFREMKLEN--------------------LQM---------- 282
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
++ T SVLTAC + L G VH++I + K ++ +++ L+ MY KC + A
Sbjct: 283 --DQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEA 340
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
VF +M +NVVSW +M++GYG +G E+A++ F +M+K G +P+D T V+S+C +
Sbjct: 341 VFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLAS 400
Query: 269 VMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ EG F + + +V L + G +++S L +S K
Sbjct: 401 LEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK 449
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 109/204 (53%), Gaps = 1/204 (0%)
Query: 45 LFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLA 104
+ +P + + N +I+ Y +G + A ++F++MP ++ SWN ++ ++G V
Sbjct: 44 IIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEM 103
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES-GEAVPNEATLVSVLTACA 163
F+ MP R+ VSWNS+++ + ++ +K ++ M+++ G N T ++L +
Sbjct: 104 EYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILAS 163
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
G + +G +H + V + + L+ MY K G + AR VFDE+P +NVV +N+
Sbjct: 164 KRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNT 223
Query: 224 MIMGYGLHGNGEKALELFLEMEKK 247
+IMG G E + LF EM ++
Sbjct: 224 LIMGLMRCGRVEDSKRLFFEMRER 247
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 234/471 (49%), Gaps = 49/471 (10%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MYS G +S AR +FD ++V YN++I G ++ G +++LF EM RD +W M
Sbjct: 196 MYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSM 255
Query: 61 IAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGC--------------------- 95
I G+ G A ++F M D ++ ++ C
Sbjct: 256 ITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDY 315
Query: 96 --------------VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+ N+ A F +M +NVVSW +ML + + E +K F +
Sbjct: 316 KDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 375
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M + G P++ TL SV+++CA+L L G H+ ++ + + +S L+T+Y KCG
Sbjct: 376 MQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCG 434
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+++ + +F+E+ ++ V+W +++ GY G + + LF M G KP+ TF+ VLS
Sbjct: 435 SIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLS 494
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXX 321
AC+ AG+V +G F+ M + I P +HY C++DL +RAG ++ + I +
Sbjct: 495 ACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFS-PD 553
Query: 322 XXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
C + + ++G+ A+ L+EL+P + Y++LS+ YAA+G+W++V R+R
Sbjct: 554 AISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKD 613
Query: 382 IREKGLQKEAASS------VVHL--EDFESKYFVKNYSVHRKRIMYSMLSE 424
+R+KGL+KE S VH+ D +S F +++ Y M+ E
Sbjct: 614 MRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKE 664
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 33/290 (11%)
Query: 29 MIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSW 88
++D + K G ARK+FDE+P ++V +N +I G + G +E + LF M +RD +SW
Sbjct: 193 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 252
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
MI G + G A++ F M N L+M
Sbjct: 253 TSMITGFTQNGLDRDAIDIFREMKLEN--------------------LQM---------- 282
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
++ T SVLTAC + L G VH++I + K ++ +++ L+ MY KC + A
Sbjct: 283 --DQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEA 340
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
VF +M +NVVSW +M++GYG +G E+A++ F +M+K G +P+D T V+S+C +
Sbjct: 341 VFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLAS 400
Query: 269 VMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ EG F + + +V L + G +++S L +S K
Sbjct: 401 LEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFK 449
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 109/204 (53%), Gaps = 1/204 (0%)
Query: 45 LFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLA 104
+ +P + + N +I+ Y +G + A ++F++MP ++ SWN ++ ++G V
Sbjct: 44 IIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEM 103
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES-GEAVPNEATLVSVLTACA 163
F+ MP R+ VSWNS+++ + ++ +K ++ M+++ G N T ++L +
Sbjct: 104 EYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILAS 163
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
G + +G +H + V + + L+ MY K G + AR VFDE+P +NVV +N+
Sbjct: 164 KRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNT 223
Query: 224 MIMGYGLHGNGEKALELFLEMEKK 247
+IMG G E + LF EM ++
Sbjct: 224 LIMGLMRCGRVEDSKRLFFEMRER 247
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 186/350 (53%), Gaps = 34/350 (9%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
V D++ N ++ Y + G LE +LF+ MP RDVVSW MI
Sbjct: 141 VNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMI------------------ 182
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M RN +N L + E M+ G VPN T+V+ L+ACA + +
Sbjct: 183 MGYRNGGKYNDALLVF--------------EQMQYGGVVPNRVTMVNALSACASSCAIEM 228
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G+W+ ++ N ++DV+L T L+ MYVKCG ++ VF +M +NV + N +I G L
Sbjct: 229 GVWIDDMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFCDMKEKNVFTLNVVIKGLAL 288
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD-LMRRVYNIEPKV 289
+ E+AL F ME G + ++ T V VLSAC+H+G+V +G + F L+ Y P V
Sbjct: 289 AKSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFIFSMLVDGKYGFLPNV 348
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
+HY C+VDLLARAG ++ + ++IK + + + D E E A +L+
Sbjct: 349 KHYACMVDLLARAGQLQEAFDIIKCMPFEPTAAMWGSLLLGS-KSRDDLEFSEFAATKLV 407
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
ELEP + Y+ LSN YA GRW DVER+R M++E+GL K+ S V +E
Sbjct: 408 ELEPYNTAYYVQLSNLYAEAGRWSDVERIRGMMKERGLTKDLGCSSVEVE 457
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 107/248 (43%), Gaps = 43/248 (17%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM- 80
D+ NS++D + G R+LFDEMP RDV +W MI GY G A +FE+M
Sbjct: 143 DIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQ 202
Query: 81 -----PDR---------------------------------DVVSWNCMIDGCVRVGNVP 102
P+R DV+ +ID V+ G V
Sbjct: 203 YGGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVILGTALIDMYVKCGRVE 262
Query: 103 LALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTAC 162
L+ F M +NV + N ++ AKS E L F+ M G +E TLV+VL+AC
Sbjct: 263 EGLKVFCDMKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDG-VRADEVTLVTVLSAC 321
Query: 163 AHLGKLSVGMWVHSFIKSNNIKV--DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
+H G + G ++ S + +V C++ + + G + A D+ MP +
Sbjct: 322 SHSGLVEKGRFIFSMLVDGKYGFLPNVKHYACMVDLLARAGQLQEAFDIIKCMPFEPTAA 381
Query: 221 -WNSMIMG 227
W S+++G
Sbjct: 382 MWGSLLLG 389
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 205/384 (53%), Gaps = 6/384 (1%)
Query: 51 VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
V DV+ N +++ Y + A +F+ +P R+V SWN ++ L F++
Sbjct: 476 VEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQ 535
Query: 111 MPARNV----VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
M V ++W+ ++ V+ E +++F +M G P+E T+ S+L AC+
Sbjct: 536 MNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFK-PDETTIYSILRACSLSE 594
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L +G +H ++ + D+ + L+ MY KCG + L+R+VFD MP+++V SWN+MI
Sbjct: 595 CLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIF 654
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
G+HGNG++AL LF +M KP+ ATF CVLSAC+H+ +V EG F+ M R + +E
Sbjct: 655 ANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVE 714
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P+ EHY C+VD+ +RAG ++ + I+ + ++ C + + EL +I AK
Sbjct: 715 PEAEHYTCVVDIYSRAGCLEEAYGFIQRMPME-PTAIAWKAFLAGCRVYKNVELAKISAK 773
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYF 406
+L E++P Y+ L N W + ++R +++E+G+ K S H+ + +
Sbjct: 774 KLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFV 833
Query: 407 VKNYSVHRKRIMYSMLSELGAHIK 430
+ S +Y+ L EL A IK
Sbjct: 834 AGDKSNMESDKIYNFLDELFAKIK 857
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 127/276 (46%), Gaps = 45/276 (16%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGC-- 95
A+ +FD MP RDV WN + + YV G + +F M D V+ +C++ C
Sbjct: 195 AQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSD 254
Query: 96 ----------------------VRVGN-----------VPLALEFFNRMPARNVVSWNSM 122
V V N V A F+ MP RNV++WNS+
Sbjct: 255 LQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSL 314
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ +V + L +F EM +G P+ + S+L AC+ L L G +H F +
Sbjct: 315 ASCYVNCGFPQKGLNVFREMGLNG-VKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHG 373
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
+ DV + T L+ +Y C + A+ VFD MP RNVV+WNS+ Y G +K L +F
Sbjct: 374 MVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFR 433
Query: 243 EMEKKGPKPNDATFVCVLSACT-----HAGMVMEGW 273
EM G KP+ T + +L AC+ +G V+ G+
Sbjct: 434 EMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGF 469
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 9/266 (3%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWNCMIAG 63
V AR +FD + D+V++NS+ +V G +F +M + V + ++ G
Sbjct: 91 VEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPG 150
Query: 64 YVAVGDLEAANELFERMPDR----DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
+ DL++ E+ + DV + ++ + V A F+ MP R+VV+W
Sbjct: 151 CSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTW 210
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
NS+ + +V + L +F EM+ G P+ T+ +L+AC+ L L G +H F
Sbjct: 211 NSLSSCYVNCGFPQKGLNVFREMVLDG-VKPDPVTVSCILSACSDLQDLKSGKAIHGFAL 269
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+ + +V +S L+ +Y C + A+ VFD MP RNV++WNS+ Y G +K L
Sbjct: 270 KHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLN 329
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTH 265
+F EM G KP+ +L AC+
Sbjct: 330 VFREMGLNGVKPDPMAMSSILPACSQ 355
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 122/278 (43%), Gaps = 40/278 (14%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------PD------------- 82
A+ +FD MP R+V WN + + YV G + +F M PD
Sbjct: 296 AQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQ 355
Query: 83 --------------------RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
DV +++ V A F+ MP RNVV+WNS+
Sbjct: 356 LKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSL 415
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ +V + L +F EM+ +G P+ T++S+L AC+ L L G +H F +
Sbjct: 416 SSCYVNCGFPQKGLNVFREMVLNG-VKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHG 474
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
+ DV + LL++Y KC + A+ VFD +P R V SWN ++ Y + EK L +F
Sbjct: 475 MVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFS 534
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMR 280
+M + K ++ T+ V+ C + E F M+
Sbjct: 535 QMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQ 572
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
DV N I + V A F+ + AR+VV+WNS+ A +V + L +F +M
Sbjct: 74 DVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKM- 132
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
+ N T+ S+L C+ L L G +H F+ + + DV +S+ + Y KC +
Sbjct: 133 GLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCV 192
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
A+ VFD MP R+VV+WNS+ Y G +K L +F EM G KP+ T C+LSAC
Sbjct: 193 REAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSAC 252
Query: 264 T 264
+
Sbjct: 253 S 253
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFER-- 79
DL N+++D + K G +R +FD MP++DV++WN MI G+ + A LFE+
Sbjct: 614 DLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKML 673
Query: 80 --MPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVS-----WNSMLALHVRAKSF 132
M D ++ C++ C V ++ FN M ++V + ++ ++ RA
Sbjct: 674 LSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCL 733
Query: 133 WECLKMFDEMMESGEAVPNEATL 155
E M A+ +A L
Sbjct: 734 EEAYGFIQRMPMEPTAIAWKAFL 756
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 199/384 (51%), Gaps = 10/384 (2%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----PVRDVWNWNCMIAG 63
++ AR LF+ D V YN M+ G+++NG A +F EM +V + +I+
Sbjct: 290 ITKARKLFERLGNKDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISA 349
Query: 64 YVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
+ D+ + M V N +I + G V A E FNRM R++VSW
Sbjct: 350 LSKLRDIRLVRSIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSW 409
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
SM+ +V + + +F +++ + TL+ +L A + LG LS VH F
Sbjct: 410 TSMIKGYVYHGHIDKAIILF-RLLQREHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSY 468
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
D+ ++ L+T Y KCG + AR +F +M R + SWN+MI Y +HGN + LE
Sbjct: 469 RFFHGKDLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMHGNYTEVLE 528
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
LF M+ P++ TF +L+AC+H+G+V EG F +M + Y I P HY CIVDLL
Sbjct: 529 LFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHYSCIVDLL 588
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
+RAG ++ + L+K + C + D+E+GE + K++++LEP GPY
Sbjct: 589 SRAGRLREAYNLVKSMP-STHSSAAMSALLSACRLYGDTEIGEAIGKQILKLEPHSSGPY 647
Query: 360 IMLSNTYAAQGRWDDVERVRVMIR 383
++SN A GRWD+V ++R M +
Sbjct: 648 ALVSNICAQGGRWDEVAQIRAMTK 671
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 16/276 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGET---GAARKLFDEMPVRDVWNW 57
+YS +G++ DA +FD D+ +Y SMI + +G + GA F + N
Sbjct: 76 LYSQYGKIKDAHKVFDEITNKDIFAYTSMITAYGHSGGSCVYGAFNTAFIMQQQGMLPNR 135
Query: 58 NCMIAGYVAVGDLEAANE--------LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFN 109
+++ A L A E + + D V ++D + G V LA F
Sbjct: 136 VTLVSLMHAAAKLRALREGQAVHGYAVRREIGLGDDVFETTLLDMYHKCGGVGLAASVFA 195
Query: 110 RMPARN---VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
+M AR V SWN+++A ++R E ++F MM +P+ TL + + C L
Sbjct: 196 KMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMM-CRNVLPDLLTLANAIFCCVELN 254
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L GM +H ++ + +++D++ ST L+ +Y K + AR +F+ + ++ V +N M+
Sbjct: 255 YLRRGMSIHGYMITMGVELDLVASTALVDLYCKID-ITKARKLFERLGNKDAVVYNVMMT 313
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
GY +G +A+ +F EM K N A F+ ++SA
Sbjct: 314 GYLENGLPVEAVNVFREMVKTNASTNVALFLNLISA 349
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 134/284 (47%), Gaps = 28/284 (9%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ FG V DAR +F+ T DLVS+ SMI G+V +G A LF R + + I
Sbjct: 385 YAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHIDKAIILF-----RLLQREHLSI 439
Query: 62 AGYVAVGDLEAANEL-------------FERMPDRDVVSWNCMIDGCVRVGNVPLALEFF 108
+G L+A ++L + +D+ N +I + G + A F
Sbjct: 440 DSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGKDLSVNNSLITTYAKCGKLCTARYIF 499
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
+M R + SWN+M+ + ++ E L++FD M++G+ P+E T S+LTAC+H G +
Sbjct: 500 QQMTERCLTSWNAMIGAYAMHGNYTEVLELFDH-MKAGKVTPDEVTFTSILTACSHSGLV 558
Query: 169 SVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP-VRNVVSWNSMIM 226
G+ + +K I + + +C++ + + G + A ++ MP + + ++++
Sbjct: 559 EEGLQIFGIMMKEYAIVPNEVHYSCIVDLLSRAGRLREAYNLVKSMPSTHSSAAMSALLS 618
Query: 227 GYGLHGN---GEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
L+G+ GE + L++E P + V + C G
Sbjct: 619 ACRLYGDTEIGEAIGKQILKLEPHSSGP----YALVSNICAQGG 658
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 92/189 (48%), Gaps = 14/189 (7%)
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECL-KMFDE--MMESGEAVPNEA 153
+ G + A + F+ + +++ ++ SM+ + S C+ F+ +M+ +PN
Sbjct: 79 QYGKIKDAHKVFDEITNKDIFAYTSMITAY--GHSGGSCVYGAFNTAFIMQQQGMLPNRV 136
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKCGAMDLARDVFDE 212
TLVS++ A A L L G VH + I + D + T LL MY KCG + LA VF +
Sbjct: 137 TLVSLMHAAAKLRALREGQAVHGYAVRREIGLGDDVFETTLLDMYHKCGGVGLAASVFAK 196
Query: 213 MPVRN---VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN-----DATFVCVLSACT 264
M R V SWN++I GY +G +A ELF M + P+ +A F CV
Sbjct: 197 MDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVELNYL 256
Query: 265 HAGMVMEGW 273
GM + G+
Sbjct: 257 RRGMSIHGY 265
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
+T+ L C LG L G+ VH N D + + L+ +Y + G + A VFDE
Sbjct: 33 STITFCLKTCLSLGTLEFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDE 92
Query: 213 MPVRNVVSWNSMIMGYGLHGNGE---KALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
+ +++ ++ SMI YG H G A M+++G PN T V ++ A +
Sbjct: 93 ITNKDIFAYTSMITAYG-HSGGSCVYGAFNTAFIMQQQGMLPNRVTLVSLMHAAAKLRAL 151
Query: 270 MEG 272
EG
Sbjct: 152 REG 154
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 209/405 (51%), Gaps = 14/405 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWN 56
MYS G V +A +F + D+V + +MI G+ N A + + M + D
Sbjct: 345 MYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNLMHQKALETYKMMEAEGIIPDEIT 404
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSW----NCMIDGCVRVGNVPLALEFFNRMP 112
+++ + DL+ L E+ ++ + N +ID + + ALE F+ +
Sbjct: 405 IGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEVFHSIR 464
Query: 113 ARNVVSWNSM-LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG 171
+N++SW S+ L L + + + + L F EMM + PN TLV VL+ACA +G + G
Sbjct: 465 DKNIISWTSIILGLRINNRCY-DALFFFKEMMRRQK--PNWVTLVCVLSACARIGAFTCG 521
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLH 231
+H++ + D + +L MYV+CG M+ A F + ++V +WN ++ GY
Sbjct: 522 KEIHAYALRTGVSDDGYMPNAVLDMYVRCGRMEYAWKQFFSID-QDVSTWNILLTGYAER 580
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEH 291
G G A ELF M + PN+ TF+ +L AC+ +GMV EG Y+D M+ Y+I+P ++H
Sbjct: 581 GKGTLATELFRRMLESNVVPNEVTFISILCACSRSGMVAEGLEYYDSMKYKYSIKPNLKH 640
Query: 292 YGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL 351
Y C+VDLL RAG ++++ E I+ + +K C H ELGE+ AK +
Sbjct: 641 YACVVDLLGRAGKLEDAYEFIQKIPMK-PDPAVWGALLNACRIHRRVELGELAAKNIFHD 699
Query: 352 EPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
+ +G YI+LSN YA WD V VR M+R+ G+ + S V
Sbjct: 700 DTTSVGYYILLSNLYADNNIWDKVAEVRKMMRQNGIIVDPGCSWV 744
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 136/274 (49%), Gaps = 13/274 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---PVR-DVWN 56
M+ FG + DA +F +L S+N ++ G+ K G A L+D M VR DV+
Sbjct: 143 MFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYT 202
Query: 57 WNCMIAGYVAVGDLEAANEL------FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ C++ V DL E+ F D DV+ N +I + G++ A F++
Sbjct: 203 FPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVI--NALITMYAKCGDIDTARLVFDK 260
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
MP ++ +SWN+M+A E L +F M+E P+ T+ SV+TAC +G +
Sbjct: 261 MPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEY-PVDPDLMTMTSVITACELIGDERL 319
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G +H ++ D + L+ MY G ++ A VF + R+VV W +MI GY
Sbjct: 320 GREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYEN 379
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+ +KALE + ME +G P++ T VLSAC+
Sbjct: 380 NLMHQKALETYKMMEAEGIIPDEITIGVVLSACS 413
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 12/235 (5%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
N ++ V+ GN+ A F RMP RN+ SWN ++ + + F E L ++D M+ G
Sbjct: 138 NVLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVG-V 196
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
P+ T VL C + L G +H + + DV + L+TMY KCG +D AR
Sbjct: 197 RPDVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDIDTARL 256
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC----- 263
VFD+MP ++ +SWN+MI G +G + L LF M + P+ T V++AC
Sbjct: 257 VFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGD 316
Query: 264 THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
G + G+ +MR ++ +P V Y ++ + + GLV+ +E++ +
Sbjct: 317 ERLGREIHGY----VMRTKFSRDPSV--YNSLIQMYSSVGLVEEAEKVFSQTECR 365
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 5/155 (3%)
Query: 152 EATLVSVLTACAHLGKLSVGMWVHSFIKSNNI--KVDVLLSTCLLTMYVKCGAMDLARDV 209
E + ++++ C G V S+I + + + V L LL+M+VK G + A V
Sbjct: 97 EDSYIALVRLCEWKRARKEGSRVWSYITKSKMMTHLSVKLGNVLLSMFVKFGNLVDAWYV 156
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
F MP RN+ SWN ++ GY G ++AL L+ M G +P+ TF CVL C +
Sbjct: 157 FGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTCGGVPDL 216
Query: 270 MEGW-WYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
++G + ++R + E V+ ++ + A+ G
Sbjct: 217 VKGREIHVHVLR--FGFESDVDVINALITMYAKCG 249
>Medtr5g022740.1 | PPR containing plant-like protein | HC |
chr5:8999294-8995144 | 20130731
Length = 665
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 211/406 (51%), Gaps = 31/406 (7%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N + Y + G +E A +F+ M RD+VSWN MIDG V+VG++ A + F+ MP RN+V
Sbjct: 176 NSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERNLV 235
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
+WN +++ + + ++ LK+F EM N T+V +TAC G+L G VH
Sbjct: 236 TWNCLISGYSKGRNPGYALKLFREMGRL-RIRENARTMVCAVTACGRSGRLKEGKSVHGS 294
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+ ++ ++L T L+ MY KCG ++ A VF+ M RN+VSWN+MI+G+ +HGN E
Sbjct: 295 MIRLFMRSSLILDTALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMILGHCIHGNPEDG 354
Query: 238 LELF---LEMEK-KGPK----------------PNDATFVCVLSACTHAGMVMEGWWYFD 277
L LF + ME+ KG P++ TF+ +L AC A ++ EG YF
Sbjct: 355 LSLFDLMVGMERVKGEVEVDESSSADRGLVRLLPDEITFIGILCACARAELLSEGRSYFK 414
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK-------YVSVKXXXXXXXXXXXX 330
M V+ ++P H+ C+ +LLA GL+ +EE +K Y+S
Sbjct: 415 QMIDVFGLKPNFAHFWCMANLLANVGLIDEAEECLKNMAKFDGYIS---HESLLWASLLG 471
Query: 331 XCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKE 390
C D LGE +AK LI+ +P ++ Y L YA +W++V RV+ +++E+ L
Sbjct: 472 LCRFKRDVYLGEQIAKLLIDTDPNNLAYYQFLLIIYAVAAQWENVSRVQKLMKERKLDII 531
Query: 391 AASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGS 436
S++V L++ + V N + M++EL L A S
Sbjct: 532 PGSNLVDLKNIVHNFKVSNNWREGIEAVNIMMNELSHRFGLPCADS 577
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 117/272 (43%), Gaps = 59/272 (21%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY G V AR++FD ++ DLVS+NSMIDG+VK G+ AA KLFD MP R++ WNC+
Sbjct: 181 MYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERNLVTWNCL 240
Query: 61 IAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVR------------------- 97
I+GY + A +LF M + + C + C R
Sbjct: 241 ISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRLKEGKSVHGSMIRLFM 300
Query: 98 ----------------VGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
G V A + F RM +RN+VSWN+M+ H + + L +FD
Sbjct: 301 RSSLILDTALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMILGHCIHGNPEDGLSLFDL 360
Query: 142 MM------------ESGEA-------VPNEATLVSVLTACAHLGKLSVGM-WVHSFIKSN 181
M+ ES A +P+E T + +L ACA LS G + I
Sbjct: 361 MVGMERVKGEVEVDESSSADRGLVRLLPDEITFIGILCACARAELLSEGRSYFKQMIDVF 420
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
+K + C+ + G +D A + M
Sbjct: 421 GLKPNFAHFWCMANLLANVGLIDEAEECLKNM 452
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 32/199 (16%)
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
N T VS+++AC+ + + G H N + + + L MY CG +++AR +F
Sbjct: 136 NSYTFVSLISACSKMSCVDNGKMCHGQAVKNGVDFVLPVENSLAHMYGSCGYVEVARVMF 195
Query: 211 DEMPVRNVVSWNSMIMGYGLHG-------------------------------NGEKALE 239
D M R++VSWNSMI GY G N AL+
Sbjct: 196 DGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERNLVTWNCLISGYSKGRNPGYALK 255
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
LF EM + + N T VC ++AC +G + EG M R++ + + ++D+
Sbjct: 256 LFREMGRLRIRENARTMVCAVTACGRSGRLKEGKSVHGSMIRLF-MRSSLILDTALIDMY 314
Query: 300 ARAGLVKNSEELIKYVSVK 318
+ G V+ + ++ + +S +
Sbjct: 315 CKCGRVEAASKVFERMSSR 333
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 205/376 (54%), Gaps = 6/376 (1%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
+ V N +ID + K G A ++F ++ +DV +WN +IA G++ + + MP
Sbjct: 141 NTVVANCLIDMYGKCGSVERAVRIFSDIADKDVISWNSVIAACANNGNIGLGFKFLQLMP 200
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
+ DVVS+N +I+G + G + A+ + MP N SWNS++ V E L+MF +
Sbjct: 201 NPDVVSYNGLINGIAQAGKIEDAVRILSTMPCPNSSSWNSVITGFVNRSRVPEALEMFGK 260
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
M + +E T +L A L L+ GM +H + +++ + L+ MY KCG
Sbjct: 261 MHLKNLQI-DEFTFSIILNGIASLSALTWGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCG 319
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF--LEMEKKGPKPNDATFVCV 259
++ A +F+ + RN+VSWN+MI GY +G+ +A+ LF L+ME+ KP+ TF+ V
Sbjct: 320 QVNDAESIFNVLSNRNLVSWNAMIYGYARNGDSAQAISLFELLKMERD-TKPDGITFLNV 378
Query: 260 LSACTHAGMVME-GWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+SAC+H+ + E G YFD M Y I P ++H ++ L+ + G + ++++I + +
Sbjct: 379 ISACSHSQIPFEMGIQYFDAMINEYGIAPSIKHCCSMIRLMGQKGELSRAQKMIHELGFE 438
Query: 319 XXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERV 378
C T D + EI A ++I LE + Y+MLSN YA+ GRW+DV +
Sbjct: 439 -SCGVVWRSLLAACGTQEDLHVAEIAAAKVIGLERDEDYVYVMLSNMYASFGRWEDVNVI 497
Query: 379 RVMIREKGLQKEAASS 394
R ++ +K ++KEA SS
Sbjct: 498 RSLMSKKRVRKEAGSS 513
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 90/169 (53%), Gaps = 11/169 (6%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A F +P NVVSWN++++ +V A F + L +F ++ E + + + S + ACA
Sbjct: 60 AHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKL-ERSQICADAFSFTSAMVACA 118
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
L L +G +HS + + +++ CL+ MY KCG+++ A +F ++ ++V+SWNS
Sbjct: 119 QLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRIFSDIADKDVISWNS 178
Query: 224 MIMGYGLHGN---GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
+I +GN G K L+L P P+ ++ +++ AG +
Sbjct: 179 VIAACANNGNIGLGFKFLQLM-------PNPDVVSYNGLINGIAQAGKI 220
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 27/239 (11%)
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
N LV ++ L G +HS+ I+S ++ +ST L+ YVK A ++
Sbjct: 4 NALALVDLIRTATDLCFHKFGQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNL 63
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
F E+P NVVSWN++I GY G +KAL LF ++E+ + +F + AC
Sbjct: 64 FVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICADAFSFTSAMVACAQ---- 119
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYG---------CIVDLLARAGLVKNSEELIKYVSVKXX 320
L++ +I K G C++D+ + G V+ + + ++ K
Sbjct: 120 ------LSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRIFSDIADK-- 171
Query: 321 XXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPM-DIGPYIMLSNTYAAQGRWDDVERV 378
C + + LG + ++L P D+ Y L N A G+ +D R+
Sbjct: 172 DVISWNSVIAACANNGNIGLG----FKFLQLMPNPDVVSYNGLINGIAQAGKIEDAVRI 226
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 203/395 (51%), Gaps = 37/395 (9%)
Query: 5 FGRVSDARLL-FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAG 63
GR+ A++L FD + D V ++ID +VKNG G R +FD M ++V + +I+G
Sbjct: 160 LGRMVHAQILKFD--VEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISG 217
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
Y+ G + A +F + D+DVV +N MI+G +V + R++ + M
Sbjct: 218 YMNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAM----------RSLEVYIDMQ 267
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI 183
L+ R PN +T S++ AC+ L +G V + +
Sbjct: 268 RLNFR---------------------PNLSTFASIIGACSVLAAFEIGEQVQAQLMKTPF 306
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
+ L + L+ MY KCG + A+ VFD M +NV SW SMI GYG +G ++ALELF +
Sbjct: 307 FAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNGFPDEALELFKK 366
Query: 244 ME-KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
M+ + PN TF+ L+AC HAG+V GW F M Y ++P++EHY C+VDLL RA
Sbjct: 367 MQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEHYACMVDLLGRA 426
Query: 303 GLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD-IGPYIM 361
G + + E + + + C H + E+ ++ A L +L G Y+
Sbjct: 427 GWLNQAWEFVTRMPER-PNSDVWLALLSSCRIHGNIEMAKLAANELFKLNAYGRPGAYVA 485
Query: 362 LSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
LSNT A G+WD+V +R +++EKG+ K+ A S V
Sbjct: 486 LSNTLADAGKWDNVSELREVMKEKGISKDTACSWV 520
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%)
Query: 144 ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
++ + +P + L + S G +HS I + +S LL +Y+K ++
Sbjct: 29 QNHDFIPPSTFFSNTLQHYINSQTPSHGQKIHSHILKTGFVPNTNISIKLLILYIKSHSL 88
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
AR VFD++ R + ++N MI GY +G +++L+LF ++ G KP+ TF +L A
Sbjct: 89 RYARQVFDDLHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFTFSMILKAS 148
Query: 264 TH 265
T+
Sbjct: 149 TN 150
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 212/414 (51%), Gaps = 28/414 (6%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDG----CVR 97
A +LFD++ ++ +N M GY + D F R R V + +G C
Sbjct: 80 AHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRRCL-RLVSKVKALAEGKQLHCFA 138
Query: 98 V---------------------GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECL 136
V G++ + F+++ VV++N+++ R E L
Sbjct: 139 VKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEAL 198
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTM 196
+F E+ E G P + T++ VL++CA LG L +G W+H ++K V ++T L+ M
Sbjct: 199 ALFRELQEIGLK-PTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDM 257
Query: 197 YVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATF 256
Y KCG++D A +VF +MP R+ +W+++I+ Y HG+G +A+ + EM+K+ +P++ TF
Sbjct: 258 YAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITF 317
Query: 257 VCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVS 316
+ +L AC+H G+V EG+ YF M Y I P ++HYGC+VDLL RAG + + + I +
Sbjct: 318 LGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELP 377
Query: 317 VKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVE 376
+K C+TH + E+G+ V +R+ EL+ G Y++ SN A G+WDDV
Sbjct: 378 IK-PTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVN 436
Query: 377 RVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
+R + +KG K S + + + ++F ++ L EL +K
Sbjct: 437 HLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELK 490
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 119/258 (46%), Gaps = 14/258 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC- 59
MY+ G + +R +FD +V+YN++I +N A LF E+ + +
Sbjct: 156 MYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVT 215
Query: 60 ---MIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+++ +G L+ + E + DR V +ID + G++ A+ F MP
Sbjct: 216 MLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMP 275
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+ +W++++ + ++ + M +EM + + P+E T + +L AC+H G + G
Sbjct: 276 KRDTQAWSAIIVAYATHGDGFQAISMLNEMKKE-KVQPDEITFLGILYACSHNGLVEEGF 334
Query: 173 -WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV-VSWNSMIMGYGL 230
+ H I + C++ + + G +D A DE+P++ + W +++
Sbjct: 335 EYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACST 394
Query: 231 HGN---GEKALELFLEME 245
HGN G++ +E E++
Sbjct: 395 HGNVEMGKRVIERIFELD 412
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 201/363 (55%), Gaps = 10/363 (2%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
D+ + +ID + G++ A F+ MP RNVVSW+ ++ +V+ E L++F +
Sbjct: 155 DIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFL 214
Query: 144 --ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
E E V N+ TL SVL C L +G +H + +++ L+++Y KCG
Sbjct: 215 VEEENEGV-NDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCG 273
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEK-KGPKPNDATFVCVL 260
++ A DVF+E+ VRN+ WN+M++ H + +K ELF +M+ G K N TF+CVL
Sbjct: 274 VVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVL 333
Query: 261 SACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXX 320
AC+HAG+V +G +YF+LM+ Y IEP +HY +VDLL RAG + ++ +LI+ + ++
Sbjct: 334 YACSHAGLVEKGKYYFELMKD-YGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPME-P 391
Query: 321 XXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRV 380
C H +++L VA R+ EL + G ++MLSN YAA GRW++ + R
Sbjct: 392 TESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARK 451
Query: 381 MIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRI-MYSMLSELGAHIKLSPAGSIEK 439
M+R++G++KE S V E F H K + +Y L ELG ++ AG +
Sbjct: 452 MMRDRGIKKETGLSWVE-EGNRIHTFAAGDRSHAKSVEIYDKLDELGE--EMDKAGYVAD 508
Query: 440 DNF 442
+F
Sbjct: 509 TSF 511
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 4/217 (1%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
+L+ F+ P ++ +W+S+++ + L F M+ G P++ S +C
Sbjct: 74 SLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQG-VPPDDHIFPSATKSCG 132
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
L L V +H F +D+ + + ++ MY KCG + A +VFDEMP RNVVSW+
Sbjct: 133 ILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSG 192
Query: 224 MIMGYGLHGNGEKALELF--LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
+I GY G +++L LF +E++ ND T VL C + ++ G L +
Sbjct: 193 LIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFK 252
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+ + ++ L ++ G+V+ + ++ + V+V+
Sbjct: 253 T-SFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVR 288
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 42/259 (16%)
Query: 21 LDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM 80
LD+ +S+ID + K G+ A +FDEMP R+V +W+ +I GYV +G+ + + LF+R
Sbjct: 154 LDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRF 213
Query: 81 P-----------------------------------------DRDVVSWNCMIDGCVRVG 99
D + +I + G
Sbjct: 214 LVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCG 273
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
V A + F + RN+ WN+ML + + ++FD+M G N T + VL
Sbjct: 274 VVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVL 333
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
AC+H G + G + +K I+ + ++ + + G ++ A + +EMP+
Sbjct: 334 YACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTE 393
Query: 220 S-WNSMIMGYGLHGNGEKA 237
S W +++ G LHGN + A
Sbjct: 394 SVWGALLTGCRLHGNTKLA 412
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 231/472 (48%), Gaps = 47/472 (9%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV----AVG 68
L + D+ S D + K G G A +FDEMP R++ WN I+ V ++
Sbjct: 133 LALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSLD 192
Query: 69 DLEAANELFERMPDRDVVSWNCMIDGCV-------------------------------- 96
+ A E + + +++ ++ CV
Sbjct: 193 VIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLID 252
Query: 97 ---RVGNVPLALEFFNRMPAR-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
+ G++ A F+R+ R NVVSW SML V+ +F ++ + E P +
Sbjct: 253 FYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHEEERACMVFLQVRK--EVEPTD 310
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
+ SVL+ACA LG L +G VH+ +K ++ + + L+ +Y KCG+++ A VF E
Sbjct: 311 FMISSVLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSE 370
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEME--KKGPKPNDATFVCVLSACTHAGMVM 270
+P N+V+WN+MI GY G+ + AL LF EM +G +P+ T V +LS C+ G V
Sbjct: 371 LPESNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVE 430
Query: 271 EGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXX 330
G F+ MR Y IEP EH+ C+VDLL R+GLV + E I+ + ++
Sbjct: 431 RGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQ-PTISVWGALLG 489
Query: 331 XCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKE 390
C H +ELG+I A++L EL+ +D G +++LSN A+ GRW++ VR +++ G++K
Sbjct: 490 ACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKN 549
Query: 391 AASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSIEKDNF 442
S + +++ + K+ S R + +ML +L +K AG + N
Sbjct: 550 VGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMK--EAGYVPDTNL 599
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 1/150 (0%)
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
R VV+W S+++ V + F L F M PN+ T V A A + G
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRD-NVQPNDFTFPCVFKASALMQIPMTGKQ 129
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+H + DV + MY K G A ++FDEMP RN+ +WN+ I
Sbjct: 130 IHGLALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRR 189
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ F E +PN TF L+AC
Sbjct: 190 SLDVIAAFKEFLCVHGEPNSITFCAFLNAC 219
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 6/117 (5%)
Query: 157 SVLTACAHLGKLSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
+V T C+ LG+ +H+ I+++ + LS L+ MY K ++ A+ V +
Sbjct: 16 AVSTHCSILGRT-----IHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFTHL 70
Query: 216 RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
R VV+W S+I G + AL F M + +PND TF CV A + M G
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTG 127
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 224/469 (47%), Gaps = 44/469 (9%)
Query: 16 DSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANE 75
+S LDL N ++ HV+ AR FD+MP RD +W MI G V + A E
Sbjct: 151 NSGFELDLYMMNRVLFMHVQCNLMRDARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFE 210
Query: 76 LF---------------------------------------ERMPDRDVVSWNCMIDGCV 96
LF +R + D +ID
Sbjct: 211 LFLCMWEEFNNGKSRTFAAMVRASARLDCIEVGRQIHTCILKRAVNGDPFVDCALIDMYS 270
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
+ GN+ A F++MP + V WN+++A + E L ++ +M +SG + + T+
Sbjct: 271 KCGNIEDARCVFDQMPQKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKI-DHFTIS 329
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
V+T CA L L G H+ + D++ ++ L+ Y K G M+ AR VFD+M +
Sbjct: 330 IVITICARLASLEHGKQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHRK 389
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
N++SWN++I GYG HG GE+A+E+F +M ++ PN TF+ VLSAC+++G+ GW F
Sbjct: 390 NIISWNALIAGYGHHGRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSERGWEIF 449
Query: 277 DLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHM 336
M + +NI+P+ HY C+++LL R GL+ + LI+ C H
Sbjct: 450 QSMSQDHNIKPRAMHYACMIELLGREGLLDEAVALIRNAPFP-PTLNMWAALLIACRMHK 508
Query: 337 DSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
+ ELG+ A++L +EP + Y+ML N Y + G+ + V ++ KGL+ A + +
Sbjct: 509 NLELGKFAAEKLYGMEPEKLCNYVMLLNIYNSSGKLKEAADVLQTLKRKGLRMLPAYTWI 568
Query: 397 HLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSI-EKDNFRP 444
+ + + S + + +Y + L +++S G + EK+ P
Sbjct: 569 EVNKQPHAFLCGDKSHKQTKKIYKKVDSL--MVEISRHGYVMEKETLLP 615
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 34/315 (10%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGET----GAARKLFDEMPVRDVWN 56
MYS G + DAR +FD V +N++I G+ G + G K+ D D +
Sbjct: 268 MYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFT 327
Query: 57 WNCMIAGYVAVGDLEAANE----LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ +I + LE + L R D+V+ + +++ + G + A F++M
Sbjct: 328 ISIVITICARLASLEHGKQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMH 387
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+N++SWN+++A + E ++MF++M++ PN T ++VL+AC++ G LS
Sbjct: 388 RKNIISWNALIAGYGHHGRGEEAIEMFEKMLQEN-MTPNHVTFLAVLSACSYSG-LSERG 445
Query: 173 W--VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS-WNSMIMGYG 229
W S + +NIK + C++ + + G +D A + P ++ W ++++
Sbjct: 446 WEIFQSMSQDHNIKPRAMHYACMIELLGREGLLDEAVALIRNAPFPPTLNMWAALLIACR 505
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
+H N LE+ K +A GM E + ++ +YN K+
Sbjct: 506 MHKN--------LELGK-------------FAAEKLYGMEPEKLCNYVMLLNIYNSSGKL 544
Query: 290 EHYGCIVDLLARAGL 304
+ ++ L R GL
Sbjct: 545 KEAADVLQTLKRKGL 559
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 96/184 (52%), Gaps = 4/184 (2%)
Query: 127 VRAKSFWECLKMFDEM-MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
V F E +++F+ + +E+ E+ +T ++++AC L + V +++K++ ++
Sbjct: 97 VLCNKFMEAMELFEMLELENAESYVGASTYDALISACIRLRSIIGVKRVFNYMKNSGFEL 156
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEME 245
D+ + +L M+V+C M AR FD+MP R+ SW +MI G N +A ELFL M
Sbjct: 157 DLYMMNRVLFMHVQCNLMRDARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELFLCMW 216
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFD-LMRRVYNIEPKVEHYGCIVDLLARAGL 304
++ TF ++ A + G +++R N +P V+ ++D+ ++ G
Sbjct: 217 EEFNNGKSRTFAAMVRASARLDCIEVGRQIHTCILKRAVNGDPFVD--CALIDMYSKCGN 274
Query: 305 VKNS 308
++++
Sbjct: 275 IEDA 278
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 185/343 (53%), Gaps = 6/343 (1%)
Query: 58 NCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
N +I Y G +A ++FE D D+VSW+ ++ + G + +A + F+ MP
Sbjct: 144 NALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPE 203
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
R+VVSW ML+ + +AK E L +F EM +G P+E T++SV++ACA LG +G
Sbjct: 204 RDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAG-VWPDEVTVLSVISACAELGDAEMGRM 262
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
VH F++ N V L L+ MY KCG ++ A VFD +++++WN+M+M HG
Sbjct: 263 VHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGY 322
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
E A LF M G P+ T + +L A H G V EG F+ M+R Y +EP++EHYG
Sbjct: 323 AEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYG 382
Query: 294 CIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEP 353
+VD+L R+G ++ + L+ + + C H D +GE V K+L+EL+P
Sbjct: 383 AVVDMLGRSGRLQEAYNLLTSMPIP-SNDVIWGALLGACRIHGDVGMGERVIKKLLELKP 441
Query: 354 MDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
+ G YI+L + Y A GR + +R + G +K S V
Sbjct: 442 DEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWV 484
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 142/308 (46%), Gaps = 54/308 (17%)
Query: 1 MYSVFGRVSDARLLFDSS----LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN 56
+Y+V G AR +F+ + L +D+VS++ ++ H K GE ARK+FD MP RDV +
Sbjct: 149 LYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVS 208
Query: 57 WNCMIAGYVAVGDLEAANELFERM------PDRDVV------------------------ 86
W M++ Y +LF+ M PD V
Sbjct: 209 WTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVE 268
Query: 87 ----SW-----NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
W N +ID + G + A + F+R +++++WN+M+ + + +
Sbjct: 269 ENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFR 328
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLTM 196
+F+ M+ SG VP+ T++++L A AH G + G+ + S + ++ + ++ M
Sbjct: 329 LFEGMIGSG-VVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDM 387
Query: 197 YVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGPKPN 252
+ G + A ++ MP+ N V W +++ +HG+ GE+ ++ LE+ KP+
Sbjct: 388 LGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLEL-----KPD 442
Query: 253 DATFVCVL 260
+ + +L
Sbjct: 443 EGGYYILL 450
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 185/343 (53%), Gaps = 6/343 (1%)
Query: 58 NCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
N +I Y G +A ++FE D D+VSW+ ++ + G + +A + F+ MP
Sbjct: 144 NALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPE 203
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
R+VVSW ML+ + +AK E L +F EM +G P+E T++SV++ACA LG +G
Sbjct: 204 RDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAG-VWPDEVTVLSVISACAELGDAEMGRM 262
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
VH F++ N V L L+ MY KCG ++ A VFD +++++WN+M+M HG
Sbjct: 263 VHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGY 322
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
E A LF M G P+ T + +L A H G V EG F+ M+R Y +EP++EHYG
Sbjct: 323 AEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYG 382
Query: 294 CIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEP 353
+VD+L R+G ++ + L+ + + C H D +GE V K+L+EL+P
Sbjct: 383 AVVDMLGRSGRLQEAYNLLTSMPIP-SNDVIWGALLGACRIHGDVGMGERVIKKLLELKP 441
Query: 354 MDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
+ G YI+L + Y A GR + +R + G +K S V
Sbjct: 442 DEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWV 484
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 142/308 (46%), Gaps = 54/308 (17%)
Query: 1 MYSVFGRVSDARLLFDSS----LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN 56
+Y+V G AR +F+ + L +D+VS++ ++ H K GE ARK+FD MP RDV +
Sbjct: 149 LYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVS 208
Query: 57 WNCMIAGYVAVGDLEAANELFERM------PDRDVV------------------------ 86
W M++ Y +LF+ M PD V
Sbjct: 209 WTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVE 268
Query: 87 ----SW-----NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
W N +ID + G + A + F+R +++++WN+M+ + + +
Sbjct: 269 ENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFR 328
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLTM 196
+F+ M+ SG VP+ T++++L A AH G + G+ + S + ++ + ++ M
Sbjct: 329 LFEGMIGSG-VVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDM 387
Query: 197 YVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGN---GEKALELFLEMEKKGPKPN 252
+ G + A ++ MP+ N V W +++ +HG+ GE+ ++ LE+ KP+
Sbjct: 388 LGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLEL-----KPD 442
Query: 253 DATFVCVL 260
+ + +L
Sbjct: 443 EGGYYILL 450
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 221/425 (52%), Gaps = 18/425 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
MY+ ++DAR +F+ +DLVSYN+MI+G+ + + A LF EM + +
Sbjct: 387 MYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLI 446
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMID---GCVRVGNVPLALEFFN 109
+ ++ ++ LE +N++ + D + + +ID C RVG+ L F
Sbjct: 447 FVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLV---FE 503
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+ +++V W +M + + + E LK++ + ++ PNE T +V+TA +++ L
Sbjct: 504 EIQDKDIVVWTAMFSGYTQQSENEESLKLY-KCLQMSRLKPNEFTFAAVITAASNIASLR 562
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
G H+ + D ++ L+ MY K G+++ A F ++ WNSMI Y
Sbjct: 563 HGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYA 622
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
HG EKAL++F +M +G KPN TFV VLSAC+H G++ G+ +FD M + + IEP +
Sbjct: 623 QHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ-FGIEPGI 681
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHY C+V LL RAG + ++E I+ + +K C + ELG A+ I
Sbjct: 682 EHYVCMVSLLGRAGKLYEAKEFIEKMPIK-QAAVVWRSLLSACRVSGNVELGTYAAEMAI 740
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKN 409
P D G Y++LSN +A++G W +V R+R + G+ KE S + + + K+ K+
Sbjct: 741 SCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKFIAKD 800
Query: 410 YSVHR 414
+ HR
Sbjct: 801 -TAHR 804
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 145/313 (46%), Gaps = 19/313 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----VRDVWN 56
Y+ + DARLLFD ++ ++I G+ K G + + KLFD+M D +
Sbjct: 185 FYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYV 244
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ +++ + + LE ++ DV N ID + V L + F+RM
Sbjct: 245 LSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMV 304
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+NVVSW +++A ++ + L +F EM G P+ SVL +C L L G
Sbjct: 305 DKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWN-PDAFGCTSVLNSCGSLVALEKGR 363
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
VH++ NI D + L+ MY KC ++ AR VF+ M ++VS+N+MI GY
Sbjct: 364 QVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQD 423
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
+AL+LF EM P FV +L V ++ +L +++ + K Y
Sbjct: 424 KLCEALDLFREMRLSLSSPTLLIFVSLLG-------VSASLYHLELSNQIHGLIIK---Y 473
Query: 293 GCIVDLLARAGLV 305
G +D A + L+
Sbjct: 474 GVSLDEFAGSALI 486
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 92/181 (50%)
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
D+ N ++ ++ V A + F+ M +N+V+W+SM++++ E L +F +
Sbjct: 72 HDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQF 131
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
M S PNE L SV+ AC G L+ + +H + DV + T L+ Y K
Sbjct: 132 MRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHAC 191
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+D AR +FD + V+ +W ++I GY G + +L+LF +M++ P+ VLSA
Sbjct: 192 IDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSA 251
Query: 263 C 263
C
Sbjct: 252 C 252
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 128/273 (46%), Gaps = 14/273 (5%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLF-------DEMPVRDV 54
YS V+ A LFD+ +LV+++SM+ + + A LF +E P +
Sbjct: 84 YSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKP--NE 141
Query: 55 WNWNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ ++ G L A ++ + +DV +ID + + A F+
Sbjct: 142 YILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDG 201
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
+ + +W +++A + + LK+FD+M E G P++ L SVL+AC L L
Sbjct: 202 LQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKE-GHVCPDKYVLSSVLSACLMLKFLEG 260
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G +H ++ + I +DV + + Y KC + L R +FD M +NVVSW ++I G
Sbjct: 261 GKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQ 320
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ AL+LF+EM + G P+ VL++C
Sbjct: 321 NSFHRDALDLFVEMARMGWNPDAFGCTSVLNSC 353
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
K D+ L LL Y K ++ A +FD M +N+V+W+SM+ Y H + +AL LF++
Sbjct: 71 KHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQ 130
Query: 244 -MEKKGPKPNDATFVCVLSACTHAG 267
M KPN+ V+ ACT G
Sbjct: 131 FMRSCNEKPNEYILASVVRACTQFG 155
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 215/398 (54%), Gaps = 19/398 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSY--NSMIDGHVKNGETGAARKLFDEMPVR----DV 54
+Y+ FG + DA LFD D+ ++ NS+I G+ + G A L+ +M D+
Sbjct: 155 LYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDI 214
Query: 55 WNWN-----CMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFN 109
+ + C G V VG+ E + D N ++D + G++ A + FN
Sbjct: 215 FTFPRVLKVCGGIGLVGVGE-EVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFN 273
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+M R+ VSWNSML +VR E + +F +M+ GE P+ ++ ++LT+ + L
Sbjct: 274 KMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEK-PDYFSISAILTSVS---SLD 329
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
VG+ +H ++ ++ ++ ++ L+ Y K G +D AR +F+ MP R+VVSWNS+I +
Sbjct: 330 VGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISSHC 389
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
H +A+ F +ME+ G P+ TFV +LSAC H G+V +G F LM Y I+P +
Sbjct: 390 KH---PEAISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLFALMCEKYKIKPIM 446
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHYGC+V+L RAGLV+ + +I + + C H + +GEI A +L
Sbjct: 447 EHYGCMVNLYGRAGLVEKAYSIIVRMDSEAVGPTLWGALLYACLLHGNVTIGEISANKLF 506
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGL 387
ELEP + +++L Y GR +D+ER+R+M+ ++GL
Sbjct: 507 ELEPDNEHNFVLLMKIYEKAGRLEDMERIRMMMVDRGL 544
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV 185
+ ++ + L + +E G + E S+L C G + G+W+H I +
Sbjct: 86 QTKFQALEQVLNDLEASLEKGIKIDPE-IYASLLETCYRFGAIHHGIWLHRLIPPALLHR 144
Query: 186 DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS--WNSMIMGYGLHGNGEKALELFLE 243
+V +S+ L+ +Y G MD A D+FD+M R++ + WNS+I GY G + A+ L+ +
Sbjct: 145 NVGISSKLVRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQ 204
Query: 244 MEKKGPKPNDATFVCVLSACTHAGMVMEG 272
M ++G +P+ TF VL C G+V G
Sbjct: 205 MVEEGVEPDIFTFPRVLKVCGGIGLVGVG 233
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 203/372 (54%), Gaps = 7/372 (1%)
Query: 60 MIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
+I+ Y A+ +F R+ ++ + N +I+ V+ G +A + F++MP R+VV+W
Sbjct: 45 LISTYAHCQQPNIAHHVFSRV--MNLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTW 102
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N+++ +V+ F + L +F M+++ + P+ T SV+T CA LG WVH +
Sbjct: 103 NTVIGGYVKNLRFLDALSIFRVMLKA-KVEPDGFTFASVVTGCARLGSFCNAKWVHGLMV 161
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
++++ +L+ L+ MY KCG +D++++VF+ + +V WN+MI G +HG+ A
Sbjct: 162 EKKVELNYILTAALVDMYAKCGRVDVSKEVFECVVRDHVSVWNAMINGLAIHGHALDATV 221
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
+F ME + P+ TFV +L C+H G+V G YF++M+ + I+P+++HYG +VDLL
Sbjct: 222 VFSRMEVENVLPDSVTFVGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLL 281
Query: 300 ARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPY 359
RAG ++ + +IK +SV+ C H ELGE + LE G +
Sbjct: 282 GRAGHLEEAYSMIKAMSVE-PDVVIWRSLLSACRIHGKKELGEFAIANISRLES---GDF 337
Query: 360 IMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMY 419
++LSN Y + W ERVR M+++ G++K+ S + L ++ + S + +Y
Sbjct: 338 VLLSNMYCSFKNWHGAERVRHMMKKGGVRKKRGKSWIELGGSIHQFNAADQSHAEMKAIY 397
Query: 420 SMLSELGAHIKL 431
+L L KL
Sbjct: 398 RVLEGLMQRAKL 409
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 48/262 (18%)
Query: 18 SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF 77
S ++L + N +I+ VK+GE A+K+FD+MPVRDV WN +I GYV A +F
Sbjct: 63 SRVMNLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIF 122
Query: 78 ERM----PDRDVVSWNCMIDGCVRVGN--------------------------------- 100
M + D ++ ++ GC R+G+
Sbjct: 123 RVMLKAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMVEKKVELNYILTAALVDMYAKC 182
Query: 101 --VPLALEFFNRMPARNVVSWNSM---LALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
V ++ E F + +V WN+M LA+H A + +F ME +P+ T
Sbjct: 183 GRVDVSKEVFECVVRDHVSVWNAMINGLAIHGHA---LDATVVFSR-MEVENVLPDSVTF 238
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
V +L C+H G + VG +++ I+ + ++ + + G ++ A + M
Sbjct: 239 VGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLLGRAGHLEEAYSMIKAMS 298
Query: 215 VR-NVVSWNSMIMGYGLHGNGE 235
V +VV W S++ +HG E
Sbjct: 299 VEPDVVIWRSLLSACRIHGKKE 320
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 228/468 (48%), Gaps = 45/468 (9%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP----------------- 50
V AR +FD + D+VS+ S+ +VK G +F EM
Sbjct: 129 VEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPA 188
Query: 51 ----------------------VRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSW 88
V +++ + +++ Y + A +F+ MP RDVVSW
Sbjct: 189 CAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSW 248
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNV----VSWNSMLALHVRAKSFWECLKMFDEMME 144
N ++ + F +M V +WN+++ + E ++MF +M +
Sbjct: 249 NGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQK 308
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
G PNE T+ S+L AC+ L +G +H ++ + D+ +T LL MY KCG ++
Sbjct: 309 MGFK-PNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLN 367
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
L+R+VFD M ++VV+WN+MI+ +HGNG++AL LF +M +PN TF VLS C+
Sbjct: 368 LSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCS 427
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXX 324
H+ +V EG F+ M R + +EP HY C+VD+ +RAG + + + I+ + ++
Sbjct: 428 HSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPME-PTASA 486
Query: 325 XXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIRE 384
C + + EL +I AK+L E+EP + G Y+ L N W + +VR++++E
Sbjct: 487 WGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKE 546
Query: 385 KGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLS 432
+G+ K S + + + + V + S +Y+ L EL +K++
Sbjct: 547 RGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMA 594
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 11/286 (3%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFD---------EMPVRDVWN 56
G + AR LFD+ D + +++I +G + A K++ +MPV
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
C ++G A+ E ++ DV N +I + V A F+ + R+V
Sbjct: 86 KACAVSGD-ALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDV 144
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
VSW S+ + +V+ + + +F EM SG PN T+ S+L ACA L L G +H
Sbjct: 145 VSWTSLSSCYVKCGFPRKGMDVFREMGWSG-VKPNPMTVSSILPACAELKDLKSGKEIHG 203
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
F + + V++ + + L+++Y KC ++ AR VFD MP R+VVSWN ++ Y + EK
Sbjct: 204 FAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEK 263
Query: 237 ALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
LFL+M + G + ++AT+ V+ C G E F M+++
Sbjct: 264 GFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKM 309
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/472 (30%), Positives = 221/472 (46%), Gaps = 49/472 (10%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP---VR-DVWN 56
Y FG V +A +FD S D VS+N+MI+G + G+ ++F EM VR D +
Sbjct: 162 FYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMRGVCVRPDEYT 221
Query: 57 WNCMIAG-------------------------------------YVAVGDLEAANELFER 79
+ +++G Y G L A +
Sbjct: 222 FVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSV 281
Query: 80 M-PDRDVVS-WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLK 137
+ P + VV+ W ++ G V +A F++M R+VVSW +M++ + A F E L+
Sbjct: 282 VKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALE 341
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN--IKVDVLLSTCLLT 195
+F ++ G P+E +V+ L+ACA LG L +G +H N ++ ++ ++
Sbjct: 342 LFVKLEGLGMK-PDEVAVVAALSACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVD 400
Query: 196 MYVKCGAMDLARDVFDEMP--VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
MY KCG++D+A DVF + + +NS+I G HG GE A LF EM G KP++
Sbjct: 401 MYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDN 460
Query: 254 ATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
TFV VLSAC H G+V G F+ M VY + P++EHYGC+VDLL RAG + + LI
Sbjct: 461 ITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLIL 520
Query: 314 YVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWD 373
+ K C H D L + + L+EL+ Y+MLSN + + D
Sbjct: 521 KMPFK-ANAVIWRALLSACKVHGDVALARVASYELVELQHDHGAGYVMLSNMLSDTDQHD 579
Query: 374 DVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
+ +R I G+QK S V + K+ + S + ML ++
Sbjct: 580 EAASLRKAIDNVGIQKPPGWSYVEMNRSLHKFLAGDKSHPEAKTTELMLRDI 631
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 128/278 (46%), Gaps = 55/278 (19%)
Query: 84 DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM 143
DV N +++ G+V A + F+ R+ VS+N+M+ R C ++F EM
Sbjct: 152 DVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEM- 210
Query: 144 ESGEAV-PNEATLVSVLTACAHLGKLSVGMWVHSFI--KSNNIKVDVLLSTCLLTMYVKC 200
G V P+E T V++L+ C+ L +G VH + + +VLL L+ MY KC
Sbjct: 211 -RGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKC 269
Query: 201 GAM---------------------------------DLARDVFDEMPVRNVVSWNSMIMG 227
G + +AR +FD+M R+VVSW +MI G
Sbjct: 270 GRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISG 329
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
Y G ++ALELF+++E G KP++ V LSAC G + +L RR++ +
Sbjct: 330 YSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGAL-------ELGRRIHR-QY 381
Query: 288 KVEHYGC---------IVDLLARAGLVKNSEELIKYVS 316
E++ C +VD+ A+ G + + ++ + S
Sbjct: 382 AGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTS 419
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWE-CLKMFDEMMESGEAVPNEATLVSVLTACAH- 164
F ++ ++ WN+++ + + S + +F M+ S +P+ T +L ACA+
Sbjct: 71 LFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNS-SVLPDSFTFPFLLKACANV 129
Query: 165 -LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
+ G VH + N DV ++ LL Y G + A VFDE VR+ VS+N+
Sbjct: 130 LISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNT 189
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
MI G+ G+ +F EM +P++ TFV +LS C+ V+E + + R+V+
Sbjct: 190 MINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCS----VLEDY---RIGRQVH 242
Query: 284 NIEPKVEHYGC----------IVDLLARAGLVKNSEELIKYV 315
+ + GC +VD+ A+ G + +E ++ V
Sbjct: 243 GLVYR--ELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVV 282
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 185/369 (50%), Gaps = 35/369 (9%)
Query: 64 YVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSML 123
Y G + A +FE +P+RDVVS +I G ++G ALE F R+ + S
Sbjct: 2 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKS----- 56
Query: 124 ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNI 183
N T VLTA + L L +G VH+ + + I
Sbjct: 57 ---------------------------NYVTYTGVLTALSGLAALDLGKQVHNHVLRSEI 89
Query: 184 KVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLE 243
V+L L+ MY KCG + +R +FD M R V+SWN+M++GY HG G + L+LF
Sbjct: 90 PSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTL 149
Query: 244 M-EKKGPKPNDATFVCVLSACTHAGMVMEGWWYF-DLMRRVYNIEPKVEHYGCIVDLLAR 301
M E+ KP+ T + VLS C+H G+ +G F D+ +EPK+EHYGC+VDLL R
Sbjct: 150 MREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGR 209
Query: 302 AGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIM 361
+G V+ + E IK + + C H + ++GE ++L+E+EP + G Y++
Sbjct: 210 SGRVEEAFEFIKKMPFE-PTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVI 268
Query: 362 LSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSM 421
LSN YA+ GRW+DV +R ++ +K + KE S + L+ + + S R+ +
Sbjct: 269 LSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMK 328
Query: 422 LSELGAHIK 430
+ EL K
Sbjct: 329 VKELSTSFK 337
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 122/274 (44%), Gaps = 50/274 (18%)
Query: 33 HVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRD-------- 84
+ K+G+ AR +F+ +P RDV + +I+GY +G E A ELF R+
Sbjct: 2 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTY 61
Query: 85 -------------------------------VVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
VV N +ID + GN+ + F+ M
Sbjct: 62 TGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYE 121
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
R V+SWN+ML + + E LK+F M E + P+ T+++VL+ C+H G G+
Sbjct: 122 RTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLN 181
Query: 174 VHSFIKSNNIKVDVLLS--TCLLTMYVKCGAMDLARDVFDEMPVRNVVS-WNSMIMGYGL 230
+ + + S I+V+ + C++ + + G ++ A + +MP + W S++ +
Sbjct: 182 IFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRV 241
Query: 231 HGN---GEKALELFLEMEKKGPKPNDATFVCVLS 261
H N GE A + LE+E P +A +LS
Sbjct: 242 HSNVDIGEFAGQQLLEIE-----PGNAGNYVILS 270
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 196 MYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
MY K G + AR VF+ +P R+VVS ++I GY G E+ALELF ++ +G K N T
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60
Query: 256 FVCVLSACTHAGMVMEGWWYFDLMRRVYN 284
+ VL+A + G DL ++V+N
Sbjct: 61 YTGVLTA-------LSGLAALDLGKQVHN 82
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/404 (29%), Positives = 203/404 (50%), Gaps = 36/404 (8%)
Query: 12 RLLFDSSLTLDLVSYNSMIDGHVKNG---------ETGAARKLFDEMPVRDVWNWNCMIA 62
+LL +L D S+ + G +G + A R FD+ ++ +I+
Sbjct: 101 QLLRHPTLLPDSFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDD----HIFVGTTLIS 156
Query: 63 GYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGN-VPLALEF------FNRMPARN 115
Y G E A ++F+ M +VV+WN ++ C R G L + F F M R+
Sbjct: 157 MYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGMWRVLGVSFGWREVVFCEMKMRD 216
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
SW++M+ ++ SF + F E++ P+E +L VL+ACA G G +H
Sbjct: 217 DASWSTMIVGFAKSGSFHDAFGFFKELLRDRNR-PSEVSLTGVLSACAQAGAFEFGKILH 275
Query: 176 SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
F++ V ++ L+ Y KCG +D+A+ VF+ + +HG +
Sbjct: 276 GFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFN--------------ISLAMHGRAD 321
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
+A+ +F EME+ G +P+ TF+ +L AC+H+G+V +G F MR Y IEP +EHYGC+
Sbjct: 322 EAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCM 381
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
VDL RA ++ + E I+ + + C+ H + EL E+V RL E++P +
Sbjct: 382 VDLYGRAARLQKAYEFIRQMPI-LPNVIIWRTLLGACSIHGNIELAELVKARLAEMDPNN 440
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
G +++LSN YA G+W DV +R + E+ ++K S++ ++
Sbjct: 441 SGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIPGWSMIEID 484
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 41/274 (14%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNG-------ETGAARKLFDEMPVRD 53
MY+ G AR +FD ++V++N+++ + G G +F EM +RD
Sbjct: 157 MYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGMWRVLGVSFGWREVVFCEMKMRD 216
Query: 54 VWNWNCMIAGYVAVGDLEAANELF-ERMPDRDV---VSWNCMIDGCVRVGNVPLAL---E 106
+W+ MI G+ G A F E + DR+ VS ++ C + G
Sbjct: 217 DASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHG 276
Query: 107 FFNRMPARNVVS---------------------WNSMLALHVRAKSFWECLKMFDEMMES 145
F + +VS +N LA+H RA E +++F EM ES
Sbjct: 277 FMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFNISLAMHGRAD---EAIRVFHEMEES 333
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKS-NNIKVDVLLSTCLLTMYVKCGAMD 204
G P+ T +S+L AC+H G + G + S +++ I+ + C++ +Y + +
Sbjct: 334 G-VRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQ 392
Query: 205 LARDVFDEMPV-RNVVSWNSMIMGYGLHGNGEKA 237
A + +MP+ NV+ W +++ +HGN E A
Sbjct: 393 KAYEFIRQMPILPNVIIWRTLLGACSIHGNIELA 426
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 88/218 (40%), Gaps = 41/218 (18%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
NC + V N L L F+ P + +N+++ + + L+ F +++
Sbjct: 51 NCAVSISDHVLNYSLRL--FHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTL 108
Query: 149 VPNEATLVSVLTACAHLG-KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLAR 207
+P+ + L A+ G G+ +HS + + + T L++MY +CG + AR
Sbjct: 109 LPDSFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYAR 168
Query: 208 DVFDEMPVRNVVSWN--------------------------------------SMIMGYG 229
VFDEM NVV+WN +MI+G+
Sbjct: 169 KVFDEMSQPNVVAWNAVVTACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFA 228
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAG 267
G+ A F E+ + +P++ + VLSAC AG
Sbjct: 229 KSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAG 266
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 207/398 (52%), Gaps = 15/398 (3%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV-- 65
S +L ++S D+ S+N++I G V+ + A + F M +N++ + V
Sbjct: 371 TSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLS 430
Query: 66 AVGDLEAANE------LFERMP-DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVS 118
AV ++E N+ L + P D N +I R ++ A + F N+ +
Sbjct: 431 AVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCT 490
Query: 119 WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI 178
WN M++ K E L++F + + PNE T+VSVL+AC +G L G VH +
Sbjct: 491 WNCMISALSHNKESREALELFRHL----QFKPNEFTIVSVLSACTRIGVLIHGKQVHGYT 546
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKAL 238
+ + +S L+ +Y CG +D A VF ++ +WNSMI YG HGNGEKA+
Sbjct: 547 FRYGYQQNSFISAALVDLYSTCGRLDNAVKVFRHSQ-KSESAWNSMIAAYGNHGNGEKAI 605
Query: 239 ELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDL 298
ELF EM G K +TFV +LSAC+H+G+V +G Y++ M Y I+P+ EH +V++
Sbjct: 606 ELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYECMLEKYGIKPEAEHQVYVVNM 665
Query: 299 LARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGP 358
LAR+G + + + K + C H + ELG+ VA++L E+EP ++G
Sbjct: 666 LARSGRIDEAYQFTKGLQ-SNASSGVWGMLLSVCNYHGELELGKKVAEKLFEMEPQNVGY 724
Query: 359 YIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV 396
YI L+N Y A G W D +R I ++GL+K A S++
Sbjct: 725 YISLANMYVAAGSWKDATDLRQYIHDQGLRKCAGYSLI 762
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 132/294 (44%), Gaps = 44/294 (14%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARK--LFDEMPVRDVWNWNCMIAGYVAVGDLEAAN 74
S + +D+ N++I+ + K G+ ++ LF+EM +DV +WN ++ G + GDLE +
Sbjct: 39 SGMLVDISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSL 98
Query: 75 ELFERM----PDRDVVSWNCMIDGCVRVGN------------------------------ 100
F RM D VS +C I C +G
Sbjct: 99 CYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLIS 158
Query: 101 -------VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
V +A F M +++VSWN+M+ + ++ E + EM +G P+
Sbjct: 159 LYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIV 218
Query: 154 TLVSVLTACAHLGKLSVGMWVHSF-IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
TL ++L CA L G +H + I+ + + + L L+ MY KC ++ A +F
Sbjct: 219 TLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHS 278
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHA 266
++VSWN+MI GY + EKA LF E+ G + +T +LS+C A
Sbjct: 279 TAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSA 332
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 144/312 (46%), Gaps = 57/312 (18%)
Query: 15 FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR-----DVWNWNCMIAGYVAVGD 69
FDS+ L +VS S H+KN G ++ + ++ D+ N +I Y GD
Sbjct: 8 FDSTTLLLVVSTLS----HLKNFGQG---RVIHCVSIKSGMLVDISLCNALINMYAKCGD 60
Query: 70 LEAANE--LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHV 127
+ +++ LFE M +DVVSWN ++ GC+ G++ +L +F R
Sbjct: 61 VNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRR----------------- 103
Query: 128 RAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD- 186
M E + +L ++AC+ LG+L+ G +H IK+
Sbjct: 104 ---------------MNFSEERADHVSLSCAISACSSLGELAFGECIHG----QGIKLGY 144
Query: 187 -----VLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
V ++ L+++Y +C A+D+A VF EM +++VSWN+M+ GY + N +A +L
Sbjct: 145 KDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLM 204
Query: 242 LEMEKKGP-KPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLA 300
+EM+ G +P+ T +L C + EG R + + + ++D+ +
Sbjct: 205 VEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYS 264
Query: 301 RAGLVKNSEELI 312
+ +V+ +E L
Sbjct: 265 KCNVVEKAELLF 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 150/336 (44%), Gaps = 49/336 (14%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDR--- 83
NS+I + + A +F EM +D+ +WN M+ GY + ++ A +L M
Sbjct: 154 NSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCF 213
Query: 84 --DVVSWNCMIDGCVRV--------------------GNVPL----------------AL 105
D+V+ M+ C + ++PL A
Sbjct: 214 QPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAE 273
Query: 106 EFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHL 165
F+ ++VSWN+M++ + + K + + +F E++ G+ + +T+ ++L++C
Sbjct: 274 LLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSS-STVFAILSSCNSA 332
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE-MPVRNVVSWNSM 224
L+ G VH + + LL L+ MY+ G + + E + ++ SWN++
Sbjct: 333 NSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTI 392
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPN--DATFVCVLSACTHAGMVMEGWWYFDL-MRR 281
I+G ++ALE F+ M ++GP N T V VLSA + ++ +G L ++
Sbjct: 393 IVGCVRGDQFQEALETFMLM-RQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKS 451
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSV 317
+ + +V++ ++ + R + ++ ++ K+ S+
Sbjct: 452 PFGSDTRVQN--SLITMYDRCRDINSARKVFKFHSI 485
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 202 bits (514), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 211/414 (50%), Gaps = 11/414 (2%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFD-EMPVRDVWNWNCMIAGYVAVGDLEAANELFERM 80
D+ + ++D + K G AR +F +D+ WN M+A G A +LF +M
Sbjct: 450 DMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQM 509
Query: 81 P----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLALHVRAKSF 132
+VVSWN +I G R G V A + F+ M N+++W +M++ +
Sbjct: 510 QMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLG 569
Query: 133 WECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTC 192
+E ++F +M +G PN ++ S L+AC ++ L+ G +H ++ N + + ++T
Sbjct: 570 YEASRVFQQMQGAGMR-PNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTS 628
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
++ MY KCG +D A+ VF + + +N+MI Y HG +AL LF E+ K+G P+
Sbjct: 629 IIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPD 688
Query: 253 DATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
TF VLSAC+H ++ EG F M ++P +HYGC+V LL G + + +I
Sbjct: 689 HITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRII 748
Query: 313 KYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRW 372
+ C + ++EL +AK L+++EP + G Y+ LSN YAA G+W
Sbjct: 749 LTMP-SPPDAHILGSLLAACGQNHETELANYIAKWLLKVEPNNPGNYVALSNVYAALGKW 807
Query: 373 DDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELG 426
D+V +R ++EKGL+K S + + + + + S K +Y +L LG
Sbjct: 808 DEVSNIRGFMKEKGLKKIPGCSWIEVGQELNVFIASDKSHPEKEEIYKILDLLG 861
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 96/176 (54%), Gaps = 7/176 (3%)
Query: 103 LALEFF-NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
+A+ FF N + +N+ S+ +++ L R + E L + EMME G P+ + + L A
Sbjct: 158 VAVHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKG-FCPDNFVVPNGLKA 216
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVD--VLLSTCLLTMYVKCGAMDLARDVFDEMP--VRN 217
C L + G +H F+ + D V ++T L+ MY KCG ++ A VFDEMP RN
Sbjct: 217 CGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRN 276
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEME-KKGPKPNDATFVCVLSACTHAGMVMEG 272
V WNSMI+GY +G +A+ LF +M + G +P++ + SAC + V EG
Sbjct: 277 DVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEG 332
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 138/322 (42%), Gaps = 47/322 (14%)
Query: 28 SMIDGHVKNGETGAARKLFDEMPVR---DVWNWNCMIAGYVAVGDLEAANELFERMP--- 81
S++D + K G A K+FDEMP R DV WN MI GYV G A LFE+M
Sbjct: 249 SLVDMYGKCGVLEDAEKVFDEMPNRKRNDVV-WNSMIVGYVQNGMNVEAVGLFEKMRFEG 307
Query: 82 --DRDVVSWNCMIDGCV-----------------------------------RVGNVPLA 104
+ VS + C +VG +
Sbjct: 308 GVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEV 367
Query: 105 LEFFNRMPA-RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
F M ++ V+WN M++ +V+ F + L+M M E + TL S+L A
Sbjct: 368 ELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAA 427
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD-EMPVRNVVSWN 222
+ +G +H F N D+ + + +L MY KCG MD AR VF +++V WN
Sbjct: 428 DTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWN 487
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV 282
+M+ G +AL+LF +M+ + PN ++ ++ G V+E F M ++
Sbjct: 488 TMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEM-QL 546
Query: 283 YNIEPKVEHYGCIVDLLARAGL 304
+ P + + ++ LA+ GL
Sbjct: 547 SGVTPNLITWTTMISGLAQNGL 568
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 149/447 (33%), Positives = 230/447 (51%), Gaps = 23/447 (5%)
Query: 3 SVFGRVSDAR-LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVRDVW 55
S F +S AR L+F S +S+N +I G+ + + +F +M P + +
Sbjct: 55 SPFKNLSHARKLVFHFSNNPSPISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTY 114
Query: 56 NW---NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMID--GCVRVGNVPLALEFFNR 110
+ +C +A + G + +L + D DV N MI+ GC + + A + F+
Sbjct: 115 PFIFKSCAMALVLCEGK-QVHADLVKFGLDSDVYVCNNMINFYGCCK--KIVYARKVFDE 171
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M R +VSWNS++ V + + F +M + P+E ++V +L+ CA LG LS+
Sbjct: 172 MCVRTIVSWNSVMTACVENVWLSDGIGYFFKMRDCAFE-PDETSMVLLLSVCAELGYLSL 230
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
G WVHS + + + V L T L+ MY K GA+ AR VF+ M RNV +W++MIMG
Sbjct: 231 GRWVHSQLILKGMVLSVHLGTALVDMYGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQ 290
Query: 231 HGNGEKALELFLEMEKKGPK---PNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
HG E+AL LF M K PN T++ VL AC+HAGMV EG+ YF M V+ I+P
Sbjct: 291 HGFAEEALVLFDMMNDKKSNNISPNYVTYLGVLCACSHAGMVDEGFRYFRDMEFVHGIKP 350
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTH---MDSELGEIV 344
+ HYG +VD+L RAG + + I+ + CT H + +G+ V
Sbjct: 351 MMVHYGAMVDVLGRAGHLGEAYRFIQSMPF-APDPIVWRTLLSACTVHDVCDRTGIGDKV 409
Query: 345 AKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESK 404
KRL+E+EP G ++++N YA G W+ VR ++R+ GL+K A S V L +
Sbjct: 410 RKRLLEMEPKRGGNLVIVANMYAEVGNWEKAANVRRVMRDGGLKKMAGESCVDLGGSMYR 469
Query: 405 YFVKNYSVHRKRIMYSMLSELGAHIKL 431
+F + S +Y +L L H+K+
Sbjct: 470 FFAGHDSRPDLMPVYDLLDALNLHLKM 496
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 114/270 (42%), Gaps = 30/270 (11%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRD-------- 53
Y ++ AR +FD +VS+NS++ V+N F +M RD
Sbjct: 156 YGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLSDGIGYFFKM--RDCAFEPDET 213
Query: 54 ---VWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ C GY+++G + + + M V ++D + G + A F R
Sbjct: 214 SMVLLLSVCAELGYLSLGRWVHSQLILKGMV-LSVHLGTALVDMYGKSGALGYARVVFER 272
Query: 111 MPARNVVSWNSM---LALHVRAKSFWECLKMFDEM--MESGEAVPNEATLVSVLTACAHL 165
M RNV +W++M LA H A+ E L +FD M +S PN T + VL AC+H
Sbjct: 273 MEKRNVWTWSAMIMGLAQHGFAE---EALVLFDMMNDKKSNNISPNYVTYLGVLCACSHA 329
Query: 166 GKLSVGM-WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNS 223
G + G + + IK ++ ++ + + G + A MP + + W +
Sbjct: 330 GMVDEGFRYFRDMEFVHGIKPMMVHYGAMVDVLGRAGHLGEAYRFIQSMPFAPDPIVWRT 389
Query: 224 MIMGYGLH------GNGEKALELFLEMEKK 247
++ +H G G+K + LEME K
Sbjct: 390 LLSACTVHDVCDRTGIGDKVRKRLLEMEPK 419
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 206/406 (50%), Gaps = 9/406 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
YS ++S L S ++VS+N++I + + G A F M + D ++
Sbjct: 349 FYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFS 408
Query: 57 WNCMIAGYVAVGDLEAANELFERMPDR---DVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
I+ + G ++ ++ + R D N ++D + G A FN++
Sbjct: 409 LASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQNSLMDMYSKCGFASSAYTIFNKIKH 468
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
+++V+WN M+ + E L +FDEM ++ + N+ T +S + AC++LG L G W
Sbjct: 469 KSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEI-NKVTFLSAIQACSNLGYLDKGKW 527
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+H I + D+ + T L+ MY KCG + A+ VFD + ++VVSW++MI +G+HG
Sbjct: 528 IHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQ 587
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
A LF +M KPN+ TF+ +LSAC HAG V EG +YF+ MR Y I P VEH+
Sbjct: 588 INAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFA 647
Query: 294 CIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEP 353
IVDLL+RAG + + E+IK + C + ++ E +A+ L +
Sbjct: 648 SIVDLLSRAGDINGAYEIIKSIRTP-VAASIWGALLNGCRIYGRMDMIEYIAEELGGIST 706
Query: 354 MDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLE 399
D G Y +LSN YA G W + +VR + GL+K S V ++
Sbjct: 707 DDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEID 752
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 12/282 (4%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDE-MPVRDVWNWNC- 59
YS G + +RL+F + + D ++ +I H+ N LF+ + + NC
Sbjct: 43 YSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCA 102
Query: 60 -----MIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+I VG+L +L R+ D V ++ + + A + F+
Sbjct: 103 FLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDE 162
Query: 111 MPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
M R++V W+S+++ +V + E L+MF M+ G P+ L+SV AC +G L +
Sbjct: 163 MCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEG-IRPDSVMLLSVAEACGKIGCLRL 221
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGL 230
VH ++ + D LS L+ MY +CG + A+ +F+ + R+ W SMI Y
Sbjct: 222 AKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQ 281
Query: 231 HGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ E+AL++F++M+ +PND T + VL++C G + EG
Sbjct: 282 NECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEG 323
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 41/251 (16%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------PDRDV---VSWNCMI 92
A+K+FDEM VRD+ W+ +I+ YV G E+F M PD + V+ C
Sbjct: 156 AKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGK 215
Query: 93 DGCVRV------------------------------GNVPLALEFFNRMPARNVVSWNSM 122
GC+R+ G + A F + R+ W SM
Sbjct: 216 IGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSM 275
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
++ + + + F E L +F +M +S E PN+ T++SVL +CA LG+L G VH F+ N
Sbjct: 276 ISAYNQNECFEEALDVFIKMQDS-EVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNA 334
Query: 183 IKVDVL-LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
+ V L L L+ Y C M + + N+VSWN++I Y G ++A+ F
Sbjct: 335 MGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFF 394
Query: 242 LEMEKKGPKPN 252
M KG P+
Sbjct: 395 ACMVAKGIMPD 405
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 172/292 (58%), Gaps = 3/292 (1%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
N ++ G G++ A F+ +P +N+ W +M+ + + + E L +F+ M+ G
Sbjct: 178 NGLVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFE 237
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
PN ATL SVL+ CA G L +G +H F++ ++V V+L T L+ MY K G + AR
Sbjct: 238 -PNGATLASVLSVCARSGCLELGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARK 296
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACTHAG 267
+FDEMP RNVV+WN+MI G HG+ E AL LF M E++ PN TFV VLSAC HAG
Sbjct: 297 LFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAG 356
Query: 268 MVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXX 327
++ G F M+ V+ IEP +EHYGC+VDLL R G + +EE+IK + K
Sbjct: 357 LIDVGREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGKLLEAEEVIKGMPWKPDVVILGAL 416
Query: 328 XXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVR 379
+ ++E+ E V K+++ L+P + G ++ LSN YA G+W +V R+R
Sbjct: 417 LAAS-KNNGNTEVAERVVKQILTLDPHNHGVHVSLSNMYAEAGQWQEVSRLR 467
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 115/260 (44%), Gaps = 41/260 (15%)
Query: 19 LTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFE 78
L D N ++ G+ +G+ AR +FDE+P++++ W MI GY A +LFE
Sbjct: 170 LCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFE 229
Query: 79 RM------PDRDVVS---WNCMIDGCVRV------------------------------G 99
RM P+ ++ C GC+ + G
Sbjct: 230 RMVVVGFEPNGATLASVLSVCARSGCLELGERIHEFMRVKGVEVGVILGTALVYMYAKNG 289
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
++ A + F+ MP RNVV+WN+M+ + L +F+ M E VPN T V VL
Sbjct: 290 DILTARKLFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVL 349
Query: 160 TACAHLGKLSVGMWVHSFIK-SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-N 217
+AC H G + VG V +K + I+ + C++ + + G + A +V MP + +
Sbjct: 350 SACCHAGLIDVGREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGKLLEAEEVIKGMPWKPD 409
Query: 218 VVSWNSMIMGYGLHGNGEKA 237
VV +++ +GN E A
Sbjct: 410 VVILGALLAASKNNGNTEVA 429
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 4/214 (1%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
GN+ A F+ + N WN+++ H + + L ++ +M G +P + T +
Sbjct: 87 GNLEHASRIFSSLHKPNSFMWNTLIRAHQQQQPHIS-LSLYIQMRRHG-VIPGKHTFPFL 144
Query: 159 LTACAHLGK-LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
L AC+ L L VH+ + + D + L+ Y G + AR VFDE+P++N
Sbjct: 145 LKACSSLSNVLPHCKQVHAHVVKFGLCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPMKN 204
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+ W +MI GY + +AL+LF M G +PN AT VLS C +G + G +
Sbjct: 205 LSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCARSGCLELGERIHE 264
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEEL 311
M RV +E V +V + A+ G + + +L
Sbjct: 265 FM-RVKGVEVGVILGTALVYMYAKNGDILTARKL 297
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/433 (31%), Positives = 223/433 (51%), Gaps = 11/433 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM-PVRDVWNWNC 59
MY+ FG++ DAR +FD L D+V + ++I G+ ++G G A ++F++M R N
Sbjct: 146 MYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYT 205
Query: 60 MIAGYVAVGDL------EAANELFERMPDRDVV-SWNCMIDGCVRVGNVPLALEFFNRMP 112
+ + V+ G+L + + L + VV S ++ + V +++ FN +
Sbjct: 206 LASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA 265
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ V+W S + V+ L MF EMM + PN TL S+L AC+ L L G
Sbjct: 266 YASHVTWTSFIVGLVQNGREEVALSMFREMMRCSIS-PNHFTLSSILHACSSLAMLEAGE 324
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H+ + + + L+ +Y KCG ++ AR VFD + ++VS N+MI Y +G
Sbjct: 325 QIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNG 384
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G +ALELF ++K G +PN TF+ +L AC +AG+V EG F L+R ++IE +HY
Sbjct: 385 FGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHY 444
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C++DLL RA + + LI+ K C H + E+ E K++++
Sbjct: 445 TCMIDLLGRAKRFEEATMLIE--EGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQA 502
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P D G +I+L+N YA+ G+WD+V ++ R+ L+K A S V ++ + + S
Sbjct: 503 PRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSH 562
Query: 413 HRKRIMYSMLSEL 425
R + ML EL
Sbjct: 563 PRAHEISEMLHEL 575
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 136/286 (47%), Gaps = 41/286 (14%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------ 80
+ +IDG++K ARKLFDEMP R + WN MI+ +V+ G + A EL+ M
Sbjct: 39 HKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVL 98
Query: 81 PDR-------------------------DVVSWNCMIDGCVRVGNVPLALEF-------- 107
PD VV + DG V G V + +F
Sbjct: 99 PDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARF 158
Query: 108 -FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+R+ ++VV + +++ + + E L++F++M+ S PNE TL SVL +C +LG
Sbjct: 159 VFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGS-RIKPNEYTLASVLVSCGNLG 217
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L G +H + ++ V T LLTMY KC ++ + VF+ + + V+W S I+
Sbjct: 218 DLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIV 277
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
G +G E AL +F EM + PN T +L AC+ M+ G
Sbjct: 278 GLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAG 323
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 117/219 (53%), Gaps = 3/219 (1%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+IDG ++ + A + F+ MP R++V+WNSM++ HV E ++++ M+ G +P
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEG-VLP 99
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKCGAMDLARDV 209
+ T ++ A + +G G H +V D ++T ++ MY K G M AR V
Sbjct: 100 DAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFV 159
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
FD + ++VV + ++I+GY HG +ALE+F +M KPN+ T VL +C + G +
Sbjct: 160 FDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDL 219
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
+ G L+ + Y +E V ++ + ++ +V++S
Sbjct: 220 VNGKLIHGLVVK-YGLESVVASQTSLLTMYSKCNMVEDS 257
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 228/484 (47%), Gaps = 54/484 (11%)
Query: 6 GRVSDARLLFDS--SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAG 63
GRV++A F++ + D+ ++N+M++G+ NG A +LF +MP RDV +W +I G
Sbjct: 139 GRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVG 198
Query: 64 -------------------YVAVG--------DLEAANELFERMPDRDV------VSWNC 90
+ VG L AA ++ + + + C
Sbjct: 199 LDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCC 258
Query: 91 MID------------GCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKM 138
+D C R+G+ A + F +NVV W ++L E L++
Sbjct: 259 GLDEFVSASLVTFYASCKRMGD---ACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEV 315
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F EMM VPNE++ S L +C L L G +H+ ++ V L+ MY
Sbjct: 316 FSEMMRF-NVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYS 374
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
KCG + A VF + +NVVSWNS+I+G HG G AL LF EM ++G + ++ T
Sbjct: 375 KCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTG 434
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
+LSAC+ +GM+ + +F R +++ VEHY C+VD+L R G V+ +E L + V+
Sbjct: 435 LLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVE 494
Query: 319 XXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERV 378
C H ++ E AKR+ E+EP Y++LSN YA+ RW +V R+
Sbjct: 495 -ANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARI 553
Query: 379 RVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAGSIE 438
R+ ++ G+ K+ SS + L+ ++ + S +Y L LG +KL G I
Sbjct: 554 RMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLG--VKLRELGYIP 611
Query: 439 KDNF 442
F
Sbjct: 612 DQQF 615
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 131/250 (52%), Gaps = 4/250 (1%)
Query: 18 SLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELF 77
S T D +S+NS+I + + A KLFDEMP R+ +W +I G+++ G + A F
Sbjct: 89 SNTKDTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFF 148
Query: 78 ERMP--DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWEC 135
MP D+DV +WN M++G G V AL F +MP+R+V+SW S++ R ++
Sbjct: 149 NAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQA 208
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS--FIKSNNIKVDVLLSTCL 193
L F M+ + TLV L+A A + G+ +H F +D +S L
Sbjct: 209 LFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASL 268
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
+T Y C M A VF E +NVV W +++ G GL+ +ALE+F EM + PN+
Sbjct: 269 VTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNE 328
Query: 254 ATFVCVLSAC 263
++F L++C
Sbjct: 329 SSFTSALNSC 338
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM----PVRDVWN 56
Y+ R+ DA +F ++ ++V + +++ G N + A ++F EM V + +
Sbjct: 271 FYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESS 330
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ + V + DLE + + + V + N ++ + G + AL F +
Sbjct: 331 FTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGIC 390
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG- 171
+NVVSWNS++ + L +F EM+ G +E TL +L+AC+ G L
Sbjct: 391 EKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREG-VESDEITLTGLLSACSRSGMLQKAR 449
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGL 230
+ F + ++K+ V C++ + +CG ++ A + MPV N + W ++ +
Sbjct: 450 CFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRV 509
Query: 231 HGN---GEKALELFLEME 245
H + E+A + EME
Sbjct: 510 HSSLDVAERAAKRIFEME 527
>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20800229-20798334 | 20130731
Length = 403
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 175/318 (55%), Gaps = 27/318 (8%)
Query: 70 LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRA 129
++ A +F+ DRD+ SWN MI V GN+ A F+ M R+VVSW++++A +V+
Sbjct: 1 MDDARNVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQV 60
Query: 130 KSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLL 189
F E L+ F M++S E PNE T+VS L IK++ L
Sbjct: 61 GCFMEDLEFFHNMLQS-EVKPNEYTMVSALA----------------------IKMNDRL 97
Query: 190 STCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
L+ MY KCG +D A VF E V R V WN+MI G+ +HG E+A+ LF +M+ +
Sbjct: 98 LASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVER 157
Query: 249 PKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
PN TF+ +L+AC+H M+ EG YF+LM Y I P++EHYGC+VDLL+R+ L+K +
Sbjct: 158 VSPNKVTFIALLNACSHGYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLSRSELLKEA 217
Query: 309 EELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAA 368
EE+I + + C + D E G + + + E++P IG ++L N Y+
Sbjct: 218 EEMILSMPM-APDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYST 276
Query: 369 QGRWDDVE--RVRVMIRE 384
GRW++ R R IRE
Sbjct: 277 SGRWNEARILRERNEIRE 294
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 33/259 (12%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAV 67
+ DAR +FDS++ DL S+N+MI +V +G A+ LFDEM RDV +W+ +IAGYV V
Sbjct: 1 MDDARNVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQV 60
Query: 68 G----DLEAANELFE----------------RMPDRDVVSWNCMIDGCVRVGNVPLALEF 107
G DLE + + + +M DR + S +ID + G + A
Sbjct: 61 GCFMEDLEFFHNMLQSEVKPNEYTMVSALAIKMNDRLLAS---LIDMYAKCGEIDSASSV 117
Query: 108 FNRMPA-RNVVSWNSML---ALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
F+ R V WN+M+ A+H + + E + +F E M+ PN+ T +++L AC+
Sbjct: 118 FHEHKVKRKVWPWNAMIGGFAMHGKPE---EAISLF-EQMKVERVSPNKVTFIALLNACS 173
Query: 164 HLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSW 221
H + G + S+ I ++ C++ + + + A ++ MP+ +V W
Sbjct: 174 HGYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLSRSELLKEAEEMILSMPMAPDVAIW 233
Query: 222 NSMIMGYGLHGNGEKALEL 240
+++ ++ + E+ +
Sbjct: 234 GALLNACRIYKDMERGYRI 252
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 187/335 (55%), Gaps = 4/335 (1%)
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
+ G + A + F+ M R++ SWN+M++ + E + +F+ M E G PN+ T++
Sbjct: 132 KTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWR-PNDVTVL 190
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
L+AC+ LG L G VH ++ + +V++ ++ M+ KCG +D A VF+ M R
Sbjct: 191 GALSACSQLGALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCR 250
Query: 217 -NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWY 275
++++WN+MIM + ++G+G KAL+L M G P+ +++ L AC HAG+V EG
Sbjct: 251 KSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRL 310
Query: 276 FDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTH 335
FDLM +V ++ V+HYG +VDLL RAG +K + E+I + + C T+
Sbjct: 311 FDLM-KVSGVKLNVKHYGSMVDLLGRAGRLKEAYEIINSMPM-FPDVVLWQSLLGACKTY 368
Query: 336 MDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSV 395
+ E+ E+ +K+L+E+ G +++LSN YAAQ RW DV RVR + + ++K S
Sbjct: 369 GNVEMAEMASKKLVEMGSNSSGDFVLLSNVYAAQQRWKDVGRVREAMVDSDVRKVPGFSY 428
Query: 396 VHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
++ K+ + S + +Y+ L E+ IK
Sbjct: 429 TEVDGRIHKFINYDQSHPNSKEIYAKLDEIKFRIK 463
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 10/224 (4%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
GN+ LA F ++ +N++L ++ + + + +M+ + V + T
Sbjct: 33 GNLSLAGNIFRQIQNPTTNDYNAILRGLAQSSEPTQSISWYRDMLCCVQRV-DALTCSFA 91
Query: 159 LTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNV 218
L CA S +HS + DVLL T LL +Y K G +D AR VFDEM R++
Sbjct: 92 LKGCARALAFSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDI 151
Query: 219 VSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDL 278
SWN+MI G ++A+ LF M+++G +PND T + LSAC+ G + EG ++
Sbjct: 152 ASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEG----EI 207
Query: 279 MRRVYNIEPKVEHY----GCIVDLLARAGLVKNSEELIKYVSVK 318
+ R Y ++ K++ ++D+ A+ G V + + + +S +
Sbjct: 208 VHR-YVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCR 250
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 15/248 (6%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWN--- 58
Y+ G + AR +FD D+ S+N+MI G + A LF+ M + W N
Sbjct: 130 YAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMK-EEGWRPNDVT 188
Query: 59 -------CMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRM 111
C G + G++ L E++ DR+V+ N +ID + G V A F M
Sbjct: 189 VLGALSACSQLGALKEGEIVHRYVLDEKL-DRNVIVCNAVIDMFAKCGFVDKAYSVFESM 247
Query: 112 PAR-NVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV 170
R ++++WN+M+ ++ L + D M G P+ + + L AC H G +
Sbjct: 248 SCRKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDG-TCPDAVSYLGALCACNHAGLVDE 306
Query: 171 GMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMIMGYG 229
G+ + +K + +K++V ++ + + G + A ++ + MP+ +VV W S++
Sbjct: 307 GVRLFDLMKVSGVKLNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACK 366
Query: 230 LHGNGEKA 237
+GN E A
Sbjct: 367 TYGNVEMA 374
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 215/454 (47%), Gaps = 44/454 (9%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRD-VWNWNCMIAGYVAVGDLEAANELFERM 80
DL +ID + K AR+ +D MP +D + N +I+GY GD E A LF +
Sbjct: 319 DLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFEL 378
Query: 81 PDRDV----------------------------VSWNC-----------MIDGCVRVGNV 101
++ +S C ++D + ++
Sbjct: 379 HHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHI 438
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A + F ++V++ SM+ + + E LK++ +M + + P+ S+L A
Sbjct: 439 DEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQM-QVADIKPDPFVCSSLLNA 497
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA+L G +H D+ S L+ MY KCG+++ A F E+P R +VSW
Sbjct: 498 CANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSW 557
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
++MI G HG+G++AL +F +M K PN T V VL AC HAG+V EG YF+ M
Sbjct: 558 SAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEE 617
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELG 341
+ I+P EH+ C++DLL R+G + + EL+ + + H + ELG
Sbjct: 618 KFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAA-RIHKNVELG 676
Query: 342 EIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDF 401
E A+RL LEP G ++L+N YA+ G W++V VR +++ ++KE S + ++D
Sbjct: 677 EKAAERLFTLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWIEVKDR 736
Query: 402 ESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAG 435
+ V + + R +++ L EL LS AG
Sbjct: 737 IHTFIVGDRNHSRSDEIFAKLDELSE--LLSKAG 768
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 19/301 (6%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWNCMIAGYVAVG 68
LL S+ +VS++++I +V+NG A F+EM V + + ++
Sbjct: 38 LLDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKK 97
Query: 69 DLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA 124
DL ++ + D N ++ + G + + F + VVSWN++ +
Sbjct: 98 DLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFS 157
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
HV++ E + +F M+E G+ PNE +L +L ACA L +G VH +
Sbjct: 158 CHVQSDFLAETVDLFKRMVE-GKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHG 216
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
+D + L+ MY K G ++ A DVF EM + VSWN++I G LH + AL L EM
Sbjct: 217 LDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEM 276
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
+K G PN T L AC G+ DL R++++ K++ DL GL
Sbjct: 277 KKSGSCPNVFTLSSALKACAAMGLK-------DLGRQIHSCSVKIDSDS---DLFVAVGL 326
Query: 305 V 305
+
Sbjct: 327 I 327
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 137/271 (50%), Gaps = 10/271 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---PVR-DVWN 56
MY+ G+ SD++ LF L +VS+N++ HV++ LF M VR + ++
Sbjct: 127 MYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYS 186
Query: 57 WNCMI---AGYVAVGDLEAANELFERMPDR-DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ ++ AG G + L ++ D S N ++D + G + A++ F M
Sbjct: 187 LSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMI 246
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ VSWN+++A V + L + +EM +SG + PN TL S L ACA +G +G
Sbjct: 247 HPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSG-SCPNVFTLSSALKACAAMGLKDLGR 305
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN-VVSWNSMIMGYGLH 231
+HS + D+ ++ L+ +Y KC MD AR +D MP ++ +++ N++I GY
Sbjct: 306 QIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQC 365
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
G+ E+A+ LF E+ + N T VL +
Sbjct: 366 GDDEQAISLFFELHHENIDFNQTTLSTVLKS 396
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/433 (30%), Positives = 220/433 (50%), Gaps = 11/433 (2%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM-PVRDVWNWNC 59
MY+ FG++ DAR +FD L D+V + ++I G+ + G G A ++F++M R N
Sbjct: 146 MYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYT 205
Query: 60 MIAGYVAVGDLE--AANELFERMPDRD-----VVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ + V+ G+L +L + + V S ++ + V +++ FN +
Sbjct: 206 LASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLA 265
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ V+W S + V+ L MF EM+ + PN T S+L AC+ L L G
Sbjct: 266 YASHVTWTSFIVGLVQNGREEIALSMFREMIRCSIS-PNHFTFSSILHACSSLAMLEAGE 324
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
+H+ + + + L+ +Y KCG ++ AR VF+ + +VVS N+MI Y +G
Sbjct: 325 QIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNG 384
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY 292
G +ALELF M+K G KPN TF+ +L AC +AG+V EG F L+R ++IE +HY
Sbjct: 385 FGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHY 444
Query: 293 GCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
C++DLL RA + + LI+ K C H + E+ E K++++
Sbjct: 445 TCMIDLLGRAKRFEEAAMLIE--EGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQA 502
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSV 412
P D G +I+L+N YA+ G+WD+V ++ R+ L+K A S V ++ + + S
Sbjct: 503 PRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSH 562
Query: 413 HRKRIMYSMLSEL 425
R + ML EL
Sbjct: 563 PRAHEISEMLHEL 575
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 139/286 (48%), Gaps = 41/286 (14%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------ 80
+ +IDG++K ARKLFDEMP R + WN MI+ +V+ G + A EL++ M
Sbjct: 39 HKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVL 98
Query: 81 PDR-------------------------DVVSWNCMIDGCVRVGNVPLALEF-------- 107
PD VV + DG V G V + +F
Sbjct: 99 PDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARF 158
Query: 108 -FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+R+ ++VV + +++ + + E L++F++M+ S PNE TL SVL +C +LG
Sbjct: 159 VFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGS-RIKPNEYTLASVLVSCGNLG 217
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L G +H + + ++ V T LLTMY KC ++ + VF+ + + V+W S I+
Sbjct: 218 DLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIV 277
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
G +G E AL +F EM + PN TF +L AC+ M+ G
Sbjct: 278 GLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAG 323
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 116/219 (52%), Gaps = 3/219 (1%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+IDG ++ + A + F+ MP R++V+WNSM++ HV E ++++D M+ G +P
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEG-VLP 99
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKV-DVLLSTCLLTMYVKCGAMDLARDV 209
+ T ++ A + +G G H +V D ++T ++ MY K G M AR V
Sbjct: 100 DAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFV 159
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
FD + ++VV + ++I+GY G +ALE+F +M KPN+ T VL +C + G +
Sbjct: 160 FDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDL 219
Query: 270 MEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNS 308
+ G L+ + +E V ++ + ++ +V++S
Sbjct: 220 VNGKLIHGLVVK-SGLESVVASQTSLLTMYSKCNMVEDS 257
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 207/395 (52%), Gaps = 21/395 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTL-DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNC 59
Y V GR+ DAR +FD DLVS+N ++ G V + +FD R
Sbjct: 153 FYCVCGRIDDARKVFDECPERNDLVSWNILMGGCVLVSDYSF---VFDLFLKRGCSGIRA 209
Query: 60 MIAGYVAVGDLEAANELFERMPDRDV------VSWNC-------MIDGCVRVGNVPLALE 106
+A +++ L AA ++ + + + + + C +ID + G + LA +
Sbjct: 210 SVATTLSL--LSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARK 267
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F+ + ++VV WN ++ + R+ E + + M + G PN +TLV +L+ + G
Sbjct: 268 VFDGVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQEG-VKPNSSTLVGLLSVYSASG 326
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
+ +V S I+ +++DV+L T L+ +Y KCG +D A ++F+ M ++V SW ++I
Sbjct: 327 SMQGVRYVTSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVIS 386
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE 286
G+G+HG A+ LF ME +G +PN+ TF+ +L+AC+H G+V EG +F M + +
Sbjct: 387 GHGIHGQAINAISLFNRMENEGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHGFS 446
Query: 287 PKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAK 346
P VEHYGC++DLL RAG++ + ELIK + +K C H D +LGE V
Sbjct: 447 PWVEHYGCLIDLLGRAGMLHEAFELIKSLPIK-GDATSWRTLLSACRVHGDVKLGECVKD 505
Query: 347 RLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVM 381
L +++S TYAA GR D+ R++ M
Sbjct: 506 VLSNFYTPHPTDSLLISGTYAAAGRISDLTRMQEM 540
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A F + N+ +N+ML + + S + L +F+++ SG + + + ++V+ AC
Sbjct: 62 ASTIFTCIQNPNLFMYNTMLRGYSVSNSSNKALPIFNKLRNSGNGL-DPFSFIAVMKACG 120
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN-VVSWN 222
++ G VH + + + V L+ +L Y CG +D AR VFDE P RN +VSWN
Sbjct: 121 RSFEVGFGRGVHGIVVKSGNRFFVDLNNTILQFYCVCGRIDDARKVFDECPERNDLVSWN 180
Query: 223 SMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
++ G L + +LFL+ G + + AT + +LSA G + G
Sbjct: 181 ILMGGCVLVSDYSFVFDLFLKRGCSGIRASVATTLSLLSAAGDIGSFVLG 230
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 193/366 (52%), Gaps = 2/366 (0%)
Query: 33 HVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMI 92
HVK G+ AR L DV + ++ Y + +F+ + + +SW MI
Sbjct: 126 HVKLGKQLHARFLLSPFFEDDVVK-SSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMI 184
Query: 93 DGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
G R G ALE F P +N+ +W ++++ V++ + + L +F EM G ++ +
Sbjct: 185 SGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADP 244
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
L SV+ ACA+ +G VH + + + + +S L+ MY KC + A+ +F E
Sbjct: 245 LVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCE 304
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
M ++VVSW S+I+G HG E+AL L+ +M G KPN+ TFV ++ AC+H G+V +G
Sbjct: 305 MRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKG 364
Query: 273 WWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXC 332
F M + I P ++HY C++DL +R+G + +E LI+ + VK C
Sbjct: 365 RALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVK-PDEPTWAALLSAC 423
Query: 333 TTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAA 392
H ++++ +A L++L+P D YI+LSN YA G W++V VR ++ K ++K
Sbjct: 424 KHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPG 483
Query: 393 SSVVHL 398
S V L
Sbjct: 484 YSCVDL 489
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 157/343 (45%), Gaps = 58/343 (16%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
MY+ F R +FDS L +S+ +MI G+ ++G A +LF E P ++++ W +
Sbjct: 155 MYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTAL 214
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSW-------------------------------- 88
I+G V G+ A LF M R+ VS
Sbjct: 215 ISGLVQSGNANDALYLFVEM-RREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITL 273
Query: 89 ---------NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMF 139
N ++D + +V A F M ++VVSW S++ + E L ++
Sbjct: 274 GYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLY 333
Query: 140 DEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWV-HSFIKSNNIKVDVLLSTCLLTMYV 198
D+M+ +G PNE T V ++ AC+H+G +S G + S ++ I+ + TCLL ++
Sbjct: 334 DDMVLAG-VKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFS 392
Query: 199 KCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKALEL---FLEMEKKGPKPNDA 254
+ G +D A ++ MPV+ + +W +++ HGN + A+ + L++ KP D
Sbjct: 393 RSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDL-----KPEDP 447
Query: 255 TFVCVLSACTHAGMVMEGWWYFDLMRRVYNIE--PKVEHYGCI 295
+ +LS +AG M W ++R++ ++ KV Y C+
Sbjct: 448 SSYILLSN-IYAGAGM--WENVSMVRKLMAVKEVKKVPGYSCV 487
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLAL----HVRAKSFWECLKMFDEMMESG 146
+ID + G + AL+ F+ +P ++ V+W ++L+ ++ K+F L + E ++
Sbjct: 49 LIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQ-- 106
Query: 147 EAVPNEATLVSVLTACAHLGKLSV--GMWVHS-FIKSNNIKVDVLLSTCLLTMYVKCGAM 203
P+ S++ ACA+LG + V G +H+ F+ S + DV+ S+ L+ MY K
Sbjct: 107 ---PDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSS-LVDMYAKFELP 162
Query: 204 DLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
D R VFD + + +SW +MI GY G +ALELF ++ P N + ++S
Sbjct: 163 DYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELF----RESPFKNLYAWTALISGL 218
Query: 264 THAGMVMEGWWYFDLMRR 281
+G + + F MRR
Sbjct: 219 VQSGNANDALYLFVEMRR 236
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 235/475 (49%), Gaps = 57/475 (12%)
Query: 11 ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI-----AGY- 64
A F+ + D+VS+N MI +++ G+ + ++F P +DV +WN +I GY
Sbjct: 188 AESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYE 247
Query: 65 ----------VAVGD------------LEAANELFE--RMPDRDVVSWNCMIDGCVRVGN 100
VA G L ++ L E R V+++ DG +R
Sbjct: 248 RLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSL 307
Query: 101 VPL-----------------ALEFFNR--------MPARNVVSWNSMLALHVRAKSFWEC 135
V + L F + P +VSW+SM++ +V + +
Sbjct: 308 VEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDG 367
Query: 136 LKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLT 195
+K F M+ V + T+ ++++ACA+ G L G +H++I+ +++D + + L+
Sbjct: 368 MKTFRSMV-CELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLID 426
Query: 196 MYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDAT 255
MY K G++D A +F+++ NVV W SMI G LHG G++A+ LF M G PN+ T
Sbjct: 427 MYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVT 486
Query: 256 FVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
FV VL+AC+H G++ EG YF +M+ Y+I P+VEHY +V+L RAG + ++ I
Sbjct: 487 FVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFEN 546
Query: 316 SVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDV 375
S+ C H + +G+ V++ L++ P D YI+LSN ++ +WD+
Sbjct: 547 SIS-HFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEA 605
Query: 376 ERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
VR ++ ++G++K+ S V L+D + V + S + + +YS L L +K
Sbjct: 606 AIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLK 660
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 53/300 (17%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMP 81
D+V NS++D ++K E A F+ M +DV +WN MI Y+ GD+E + E+F P
Sbjct: 168 DVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFP 227
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
++DVVSWN +IDG ++ G LALE M A
Sbjct: 228 NKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGT------------------------- 262
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
E P T L + L + VG +H + + + D + + L+ MY KCG
Sbjct: 263 -----EFSP--VTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCG 315
Query: 202 AMDLARDVFDEMPVR----------------NVVSWNSMIMGYGLHGNGEKALELFLEME 245
MD A + ++P+ +VSW+SM+ GY +G E ++ F M
Sbjct: 316 RMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMV 375
Query: 246 KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHY--GCIVDLLARAG 303
+ + T ++SAC +AG++ G + + I +++ Y ++D+ +++G
Sbjct: 376 CELIVVDIRTVATIISACANAGILEFGK---QIHAYIQKIGLRIDAYVGSSLIDMYSKSG 432
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWE-CLKMFDEMMES 145
S N ++ V+ N+ A + F+ + +N +W +++ RA E +F EM
Sbjct: 69 SANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQAD 128
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDL 205
G A PN+ TL SVL C+ + G +H++I N + DV+L +L +Y+KC +
Sbjct: 129 G-ACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEY 187
Query: 206 ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKK 247
A F+ M ++VVSWN MI Y G+ EK+LE+F K
Sbjct: 188 AESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNK 229
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 193 LLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG-LHGNGEKALELFLEMEKKGPKP 251
LLT+YVK +D A +FDE+ +N +W +I G+ G+ E LF EM+ G P
Sbjct: 73 LLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACP 132
Query: 252 NDATFVCVLSACTHAGMVMEG 272
N T VL C+ + G
Sbjct: 133 NQYTLSSVLKCCSRENNIQFG 153
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 192/356 (53%), Gaps = 11/356 (3%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRD-- 84
NS+ID + K G+ AA+ +FD M RDV++WN +I GY G A+ELF +M + D
Sbjct: 393 NSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSP 452
Query: 85 --VVSWNCMIDGCVRVGNVPLALEFFNRM-----PARNVVSWNSMLALHVRAKSFWECLK 137
+++WN MI G ++ G AL+ F + RN SWNS+++ V++ + L+
Sbjct: 453 PNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQ 512
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
+F M + +PN T++S+L CA+L +H F + ++ +S L+ Y
Sbjct: 513 IFRNM-QFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSY 571
Query: 198 VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFV 257
K G + ++++F+E+ ++ VSWNSM+ Y LHG E AL+LF +M K+G +PN TF
Sbjct: 572 AKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFA 631
Query: 258 CVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSV 317
+L A HAGMV EG F + + Y + +EHY +V LL R+G + + + I+ + +
Sbjct: 632 SILLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPI 691
Query: 318 KXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWD 373
+ C H + + + KR++E EP + +LS Y+ G+++
Sbjct: 692 E-PNSSVWGALLTACRIHRNFGVAVLAGKRMLEFEPGNNITRHLLSQAYSLCGKFE 746
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 133/249 (53%), Gaps = 9/249 (3%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV- 85
NS++ + K GE A+K+FD M RD WN MI+G+ G++ A + F+ M V
Sbjct: 222 NSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVE 281
Query: 86 ---VSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLALHVRAKSFWECLKM 138
V+WN +I ++G+ LA++ +M A +V +W SM++ + L +
Sbjct: 282 PSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDL 341
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
EM +G N T+ S +ACA L LS+G+ +HS N+ +VL+ L+ MY
Sbjct: 342 LKEMFLAG-VEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYC 400
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
KCG + A+ +FD M R+V SWNS+I GY G KA ELF++M++ PN T+
Sbjct: 401 KCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNI 460
Query: 259 VLSACTHAG 267
+++ +G
Sbjct: 461 MITGYMQSG 469
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 6/219 (2%)
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLV 156
+ G + +A + FN M RN+ +W++M+ R KS+ E + +F MM G +P+E L
Sbjct: 129 KCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDG-VLPDEFLLP 187
Query: 157 SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
VL AC L G +HS + ++ L ++ +Y KCG MD A+ +FD M R
Sbjct: 188 KVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDER 247
Query: 217 NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYF 276
+ V+WN+MI G+ +G +A + F M+K G +P+ T+ ++S G
Sbjct: 248 DSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLA---I 304
Query: 277 DLMRRV--YNIEPKVEHYGCIVDLLARAGLVKNSEELIK 313
DLMR++ + I P V + ++ + G + ++ +L+K
Sbjct: 305 DLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLK 343
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 131 SFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLS 190
S E + + D + E G V T +++L +C + +G +HS I V+ +
Sbjct: 63 SLSEAVTILDSLAEQGCRV-KPITYMNLLQSCIDKDCIFIGKELHSRIGLVE-NVNPFVE 120
Query: 191 TCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPK 250
T L++MY KCG + +AR VF+EM VRN+ +W++MI G + + + + LF M + G
Sbjct: 121 TKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVL 180
Query: 251 PNDATFVCVLSAC 263
P++ VL AC
Sbjct: 181 PDEFLLPKVLQAC 193
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 105/243 (43%), Gaps = 23/243 (9%)
Query: 29 MIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------PD 82
++ + K G G ARK+F+EM VR+++ W+ MI G LF M PD
Sbjct: 123 LVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPD 182
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW-----NSMLALHVRAKSFWECLK 137
++ ++ C + ++ + M R + W NS++A++ + K
Sbjct: 183 EFLLPK--VLQACGKCRDLETG-RLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKK 239
Query: 138 MFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY 197
+FD M E N ++++ G++ ++ + ++ ++ L++ Y
Sbjct: 240 IFDCMDERDSVAWN-----AMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCY 294
Query: 198 VKCGAMDLARDVFDEMP----VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
+ G DLA D+ +M +V +W SMI G+ G AL+L EM G + N+
Sbjct: 295 NQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANN 354
Query: 254 ATF 256
T
Sbjct: 355 ITI 357
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 223/437 (51%), Gaps = 16/437 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWN 56
+Y+ G V +AR +F DLV +N M+ +V N A ++F+ M + D +
Sbjct: 211 LYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFT 270
Query: 57 WNCMIA-------GYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFN 109
++ +++ Y G + + + + D DV+ + +I+ + N+ A F+
Sbjct: 271 FSSLLSVISDDALEYYDFGK-QVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFD 329
Query: 110 RMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
M RNVV+WN+M+ E +K+ EM+ G +P+E T+ S++++C + ++
Sbjct: 330 EMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREG-FLPDELTISSIISSCGYASAIT 388
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
+ VH+F + + + ++ L++ Y KCG++ A F+ ++V+W S+I Y
Sbjct: 389 ETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYA 448
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
HG EK+ E+F +M G KP+ F+ VLSAC H G+V +G YF LM Y I P
Sbjct: 449 FHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDS 508
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHY C+VDLL R GL+ + E+++ + ++ C H + EL ++ A++L
Sbjct: 509 EHYTCLVDLLGRYGLINEAFEILRSMPIE-VDSDTLGAFIGSCKLHSNMELAKLAAEKLF 567
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKN 409
+EP Y ++SN +A+Q W DVER+R + +K K S + + + + FV N
Sbjct: 568 LIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWIEIGN-QIHSFVSN 626
Query: 410 YSVHRKRI-MYSMLSEL 425
H + MY L+ L
Sbjct: 627 DKSHPNALEMYVTLNML 643
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 147/283 (51%), Gaps = 27/283 (9%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHV-KNGETGAA---------RKLFDEMPVRDVWNWNC 59
DA+ LF+ ++VS+N MI V +N E ++ R++ EM V D +N
Sbjct: 113 DAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNG 172
Query: 60 MIAGYVAVGDLEAANEL--FERMPDRDVVSWNCMIDGC------VRVGNVPLALEFFNRM 111
+I D+E +L F D+ +C + GC + G V A F +
Sbjct: 173 LICLCTQFNDIEMGVQLHCFTVKVGFDL---DCFV-GCALVGLYAKCGFVENARRVFCDV 228
Query: 112 PARNVVSWNSMLALHVRAKSFWECLKMFDEM---MESGEAVPNEATLVSVLTACAHLGKL 168
R++V WN M++ +V E ++F+ M + +G+ ++L+SV++ A L
Sbjct: 229 SCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEF-TFSSLLSVISDDA-LEYY 286
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
G VHS + + DVL+++ L+ MY K + AR VFDEM +RNVV+WN+MI+G+
Sbjct: 287 DFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGF 346
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
G HG+G + ++L EM ++G P++ T ++S+C +A + E
Sbjct: 347 GNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITE 389
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 12/188 (6%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHV------RAKSFWECLKMFDEMMESGEAVPNEATLVS 157
A + F +P RNVVSWN M+ V + C F M+ VP+ T
Sbjct: 114 AKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLE-MMVPDHITFNG 172
Query: 158 VLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
++ C + +G+ +H F +D + L+ +Y KCG ++ AR VF ++ R+
Sbjct: 173 LICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRD 232
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
+V WN M+ Y + E+A +F M ++ TF +LS + + Y+D
Sbjct: 233 LVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISD-----DALEYYD 287
Query: 278 LMRRVYNI 285
++V+++
Sbjct: 288 FGKQVHSL 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 150 PNEATLV--SVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLAR 207
PN L + L A G L G +H+ + + L +L++Y+KC + A+
Sbjct: 56 PNTVHLFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAK 115
Query: 208 DVFDEMPVRNVVSWNSMI-MGYGLHGNGEKA-----LELFLEMEKKGPKPNDATFVCVLS 261
+F+E+PVRNVVSWN MI G + E + F M + P+ TF ++
Sbjct: 116 KLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLIC 175
Query: 262 ACTHAGMVMEGWWYFDLMRRV-YNIEPKVEHYGC-IVDLLARAGLVKNSEELIKYVSVK 318
CT + G +V ++++ V GC +V L A+ G V+N+ + VS +
Sbjct: 176 LCTQFNDIEMGVQLHCFTVKVGFDLDCFV---GCALVGLYAKCGFVENARRVFCDVSCR 231
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 218/467 (46%), Gaps = 44/467 (9%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---------P-- 50
Y GR+ AR +FD D+V++N+MI G+ ++G ++L+ EM P
Sbjct: 200 YCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNA 259
Query: 51 -------------------------------VRDVWNWNCMIAGYVAVGDLEAANELFER 79
DV+ N +IA Y G L A ELF+
Sbjct: 260 VTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDE 319
Query: 80 MPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMF 139
M ++D VS+ +I G + G V AL+ + + +WN ++ V+ F L +
Sbjct: 320 MGEKDEVSYRSIISGYMINGFVDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLV 379
Query: 140 DEMMESGEAV-PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
EM G + PN TL S++ ++ L VH + + ++ ++T ++ Y
Sbjct: 380 REMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVHGYAIRRSYDQNIYVATAIVDSYA 439
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVC 258
K G + LAR VFD+ R+++ W S+I Y HG+ AL L+ +M +G +P+ T
Sbjct: 440 KLGFIHLARRVFDQSQSRSLIIWTSIIYAYASHGDASLALGLYNQMLDRGIQPDPVTLTS 499
Query: 259 VLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
VL+AC H+G+V E W F+ M + I+P VEHY C+V +L+RAG + +E+ I + +
Sbjct: 500 VLTACAHSGLVNEAWDVFNAMPSKHGIQPVVEHYACMVGVLSRAGKLSEAEKFISKMPFE 559
Query: 319 XXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERV 378
+ + D E+G+ L E+EP G YI+++N Y+ GRW++ ++
Sbjct: 560 -PTAKVWGALLNGASIYDDVEIGKFACDHLFEIEPEHTGNYIIMANLYSRAGRWEEARKI 618
Query: 379 RVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
R + + G K SS + + K+ S +Y++L L
Sbjct: 619 RERMEKTGSPKIRGSSWIETSGKLLGFIAKDMSNEMSDEIYALLKGL 665
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 165/363 (45%), Gaps = 64/363 (17%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYV 65
G+ AR F ++T D +I + K+ AR +FD++P ++ ++WN MI Y
Sbjct: 68 GKQLHARF-FPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIPHKNSFSWNSMIIAYT 126
Query: 66 AVGDLEAANELFERM---------PDR--------------------------------- 83
+ A LF PD
Sbjct: 127 SKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSVCYKSAKQIHCSALLRGF 186
Query: 84 --DVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
DV N ++ R G + +A + F+ M R++V+WN+M+ + ++ + EC +++ E
Sbjct: 187 YSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLE 246
Query: 142 MM--ESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVK 199
M+ E +PN T+ SV+ AC LS GM VH F+K + I+ DV L ++ MY K
Sbjct: 247 MLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAK 306
Query: 200 CGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKP-NDATFVC 258
CG+++ AR++FDEM ++ VS+ S+I GY ++G ++AL++ +E G ND
Sbjct: 307 CGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIENPGLSTWNDVI--- 363
Query: 259 VLSACTHAGMVMEGWW--YFDLMRRV----YNIEPKVEHYGCIVDLLARAGLVKNSEELI 312
GMV + DL+R + N++P V I+ L + ++ +E+
Sbjct: 364 -------PGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVH 416
Query: 313 KYV 315
Y
Sbjct: 417 GYA 419
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE 212
A S + C + + G +H+ I D ++T L+T Y K + AR+VFD+
Sbjct: 50 AAYGSAIQHCTNHRLIRQGKQLHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVFDK 109
Query: 213 MPVRNVVSWNSMIMGYGLHGNGEKALEL---FLEMEKKGPKPNDATFVCVL 260
+P +N SWNSMI+ Y AL L F+ P++ T +L
Sbjct: 110 IPHKNSFSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSIL 160
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/454 (29%), Positives = 215/454 (47%), Gaps = 44/454 (9%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEMPVRD-VWNWNCMIAGYVAVGDLEAANELFERM 80
DL +ID + K AR+ +D MP +D + N +I+GY GD E A LF +
Sbjct: 319 DLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFEL 378
Query: 81 PDRDV----------------------------VSWNC-----------MIDGCVRVGNV 101
++ +S C ++D + ++
Sbjct: 379 HHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHI 438
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A + F ++V++ SM+ + + E LK++ +M + + P+ S+L A
Sbjct: 439 DEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQM-QVADIKPDPFVCSSLLNA 497
Query: 162 CAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
CA+L G +H D+ S L+ MY KCG+++ A F E+P R +VSW
Sbjct: 498 CANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSW 557
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
++MI G HG+G++AL +F +M K PN T V VL AC HAG+V EG YF+ M
Sbjct: 558 SAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEE 617
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELG 341
+ I+P EH+ C++DLL R+G + + EL+ + + H + ELG
Sbjct: 618 KFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAA-RIHKNVELG 676
Query: 342 EIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDF 401
E A+RL LEP G ++L+N YA+ G W++V VR +++ ++KE S + ++D
Sbjct: 677 EKAAERLFTLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWIEVKDR 736
Query: 402 ESKYFVKNYSVHRKRIMYSMLSELGAHIKLSPAG 435
+ V + + R +++ L EL LS AG
Sbjct: 737 IHTFIVGDRNHSRSDEIFAKLDELSE--LLSKAG 768
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 19/301 (6%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WNWNCMIAGYVAVG 68
LL S+ +VS++++I +V+NG A F+EM V + + ++
Sbjct: 38 LLDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKK 97
Query: 69 DLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLA 124
DL ++ + D N ++ + G + + F + VVSWN++ +
Sbjct: 98 DLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFS 157
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
HV++ E + +F M+E G+ PNE +L +L ACA L +G VH +
Sbjct: 158 CHVQSDFLAETVDLFKRMVE-GKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHG 216
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
+D + L+ MY K G ++ A DVF EM + VSWN++I G LH + AL L EM
Sbjct: 217 LDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEM 276
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
+K G PN T L AC G+ DL R++++ K++ DL GL
Sbjct: 277 KKSGSCPNVFTLSSALKACAAMGLK-------DLGRQIHSCSVKIDSDS---DLFVAVGL 326
Query: 305 V 305
+
Sbjct: 327 I 327
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 137/271 (50%), Gaps = 10/271 (3%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---PVR-DVWN 56
MY+ G+ SD++ LF L +VS+N++ HV++ LF M VR + ++
Sbjct: 127 MYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYS 186
Query: 57 WNCMI---AGYVAVGDLEAANELFERMPDR-DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ ++ AG G + L ++ D S N ++D + G + A++ F M
Sbjct: 187 LSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMI 246
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ VSWN+++A V + L + +EM +SG + PN TL S L ACA +G +G
Sbjct: 247 HPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSG-SCPNVFTLSSALKACAAMGLKDLGR 305
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN-VVSWNSMIMGYGLH 231
+HS + D+ ++ L+ +Y KC MD AR +D MP ++ +++ N++I GY
Sbjct: 306 QIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQC 365
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
G+ E+A+ LF E+ + N T VL +
Sbjct: 366 GDDEQAISLFFELHHENIDFNQTTLSTVLKS 396
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 206/405 (50%), Gaps = 18/405 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLD-LVSYNSMIDGHVKNGETGAARKLFDEMP-----VRDV 54
MY V DAR +FD D + + S+I +N + K F M V D
Sbjct: 198 MYGWNRAVDDARRVFDELFVKDDVFCWTSIISCFTRNDMFKESLKFFYVMNRVRGVVPDG 257
Query: 55 WNWNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNR 110
+ + ++ +G L E+ ++ +VV + ++D + G V + F R
Sbjct: 258 YTFGTILTACANLGLLRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRIVFER 317
Query: 111 MP-ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLS 169
+ +N VSW +ML ++ + K + L D + E G+ N VL AC+ L ++
Sbjct: 318 LSDEKNNVSWTAMLGVYCQNKEYQNVL---DLVRERGDL--NFYAFGIVLRACSGLAAVN 372
Query: 170 VGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYG 229
G VH DV++ + L+ +Y KCG +D A +F M VRN+++WNSM+ G+
Sbjct: 373 HGKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFA 432
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKV 289
+G G +AL LF +M K+G KP+ TFV VL AC+HAG+V EG F LM Y I+P V
Sbjct: 433 QNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEGRKVFTLMGE-YGIKPVV 491
Query: 290 EHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLI 349
EHY C++DLL RAG + +E L++ + CT D E VA+++I
Sbjct: 492 EHYNCMIDLLGRAGFIDEAECLLENADCR-YDKSLWAALLGACTKCSDYRTAERVARKMI 550
Query: 350 ELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
ELEP Y++L+N Y GRWDD +R ++ ++G++K A S
Sbjct: 551 ELEPDFHLSYVLLNNIYREVGRWDDALEIRKLMEDRGVKKMAGKS 595
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 97/171 (56%), Gaps = 3/171 (1%)
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
A F+ + ++V+SW S+++ + R+ + + +F EM+ + PN TL SV+ AC+
Sbjct: 107 ARHLFDSLHVKDVISWTSLISGYTRSDLPHQSISLFYEML-AFPVQPNAFTLSSVIKACS 165
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWN 222
L +++G HS + + + ++S L+ MY A+D AR VFDE+ V+ +V W
Sbjct: 166 ALNDVNLGRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWT 225
Query: 223 SMIMGYGLHGNGEKALELFLEMEK-KGPKPNDATFVCVLSACTHAGMVMEG 272
S+I + + +++L+ F M + +G P+ TF +L+AC + G++ +G
Sbjct: 226 SIISCFTRNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQG 276
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ +S +S + H++ S + + + + P S+L G
Sbjct: 13 THSFISTDSEILHHLKTGSLSHAIHLLNTSQPTLSLKP--VIYASLLQTSVKTNSFHHGA 70
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGA---MDLARDVFDEMPVRNVVSWNSMIMGYG 229
VH+ + + + D + LLT+Y K + AR +FD + V++V+SW S+I GY
Sbjct: 71 SVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSLHVKDVISWTSLISGYT 130
Query: 230 LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+++ LF EM +PN T V+ AC+
Sbjct: 131 RSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACS 165
>Medtr7g084830.1 | PPR containing plant-like protein | HC |
chr7:32742835-32744848 | 20130731
Length = 476
Score = 196 bits (497), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 177/340 (52%), Gaps = 41/340 (12%)
Query: 3 SVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------PVR---- 52
S +G++ A L+FD D+ ++N MI + +G + LF +M P +
Sbjct: 63 SSYGKIDYASLVFDQLNDPDIFTWNVMIRAYNTSGLPQKSIFLFKDMICCGFLPDKFTYP 122
Query: 53 -----------------------------DVWNWNCMIAGYVAVG-DLEAANELFERMPD 82
DV+ N M+ Y +G D++ ++F++M
Sbjct: 123 FVINACIASGVIDFGRLTHGLAIKMGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRV 182
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
R+VVSW +I G V G + A E F R+P++NVVSW +M+ +V+ + + +F+ M
Sbjct: 183 RNVVSWTTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERM 242
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
+ PNE TLVS++ AC LG L +G +H F N ++ L T L+ MY KCG+
Sbjct: 243 LID-NVRPNEFTLVSLIKACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGS 301
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+D A VF M VRN+ +WN+M+ +G+HG G + L+LF EMEK G P+ TFV VLSA
Sbjct: 302 LDAAVKVFGLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSA 361
Query: 263 CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
C + G YF LM Y++ P +EHY C+V L RA
Sbjct: 362 CVQINDLELGQKYFSLMTEHYSLTPILEHYTCMVGLYTRA 401
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 41/254 (16%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
+ + G V D +FD ++VS+ ++I G V G+ AR++F+ +P ++V +W MI
Sbjct: 164 FKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMI 223
Query: 62 AGYVAVGDLEAANELFERMPDRDV----VSWNCMIDGCVRVGNVPL-------------- 103
GYV + A +LFERM +V + +I C +G++ L
Sbjct: 224 NGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLGSLKLGRRMHDFALKNGFE 283
Query: 104 ---------------------ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
A++ F M RN+ +WN+ML E L +F EM
Sbjct: 284 LGPFLGTALVDMYSKCGSLDAAVKVFGLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEM 343
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLS-TCLLTMYVKCG 201
++G VP+ T V VL+AC + L +G S + + +L TC++ +Y +
Sbjct: 344 EKAG-VVPDAITFVGVLSACVQINDLELGQKYFSLMTEHYSLTPILEHYTCMVGLYTRAN 402
Query: 202 AMDLARDVFDEMPV 215
++ R + D M +
Sbjct: 403 ELNEIRTLGDTMSL 416
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 207/402 (51%), Gaps = 12/402 (2%)
Query: 1 MYSVFGRVSDARLLFD-SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVW 55
MYS FG+V++AR +F+ + DLVS+N M+ + A + +M D +
Sbjct: 332 MYSFFGKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDAF 391
Query: 56 NWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARN 115
+ +++ ++ +E + + + V N +I R G + A + F+ + ++
Sbjct: 392 TYGSLLSASDSLQMVEMIHSVLCKNGLNKVEVLNALISSYSRNGQIKRAFQIFSDLAYKS 451
Query: 116 VVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVH 175
++SWNS+++ V + L+ F ++ + PN +L L+ C+ + G VH
Sbjct: 452 LISWNSIISGFVLNGYPMQGLEKFSALLNT-HLKPNAYSLSLALSICSCTPDMDHGKQVH 510
Query: 176 SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
+I + ++ L L+TMY KCG +D + VF+EM R+ ++WN++I Y HG G+
Sbjct: 511 GYILRHGFDSEISLGNALVTMYSKCGFLDRSLSVFNEMVERDTITWNAIISAYSQHGQGK 570
Query: 236 KALELFLEME-KKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC 294
+A+ F M+ G KP+ ATF VLSAC+H+G+V + FD+M +Y P V+H+ C
Sbjct: 571 EAVHCFEAMQISPGIKPDHATFTAVLSACSHSGLVDDATRIFDIMVNIYGFVPSVDHFSC 630
Query: 295 IVDLLARAGLVKNSEELIK--YVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELE 352
IVDLL R+G + +E ++ Y C H + LG VA+ L+E E
Sbjct: 631 IVDLLGRSGYLDEAERVVTDGYFGAH---PNMCWSLFSACAVHGNLTLGRKVARLLLERE 687
Query: 353 PMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
+ Y++L+N A G+W++ ++R M+++ G K+ S
Sbjct: 688 QNNPSVYVLLANICAEAGQWEEAAKLRDMVKQFGTTKQPGCS 729
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 3/208 (1%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N +++ Y DL + +F+ + DV SW ++ R+ ++ AL F++MP V
Sbjct: 94 NSLLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAISRLSDIDYALHVFDKMPKCYVA 153
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
WN+++ ++ +M N T ++L+ C L G VHS
Sbjct: 154 VWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDN-YTFATMLSLCPLSEGLDYGRHVHSV 212
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP--VRNVVSWNSMIMGYGLHGNGE 235
+ + + L+TMY CG + VF+EM VRN V++N+MI G+ E
Sbjct: 213 VVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFVSVERFE 272
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSAC 263
A +F +M + ++ TFV VLS+C
Sbjct: 273 DAFLMFRDMHRGSVCLSEVTFVSVLSSC 300
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 153/367 (41%), Gaps = 61/367 (16%)
Query: 1 MYSVFGRVSD---ARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNW 57
+ S++ + D L+FD D+ S+ +++ + + A +FD+MP V W
Sbjct: 96 LLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAISRLSDIDYALHVFDKMPKCYVAVW 155
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDV-------------------------------- 85
N +I G G + A L + M +V
Sbjct: 156 NAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLSLCPLSEGLDYGRHVHSVVVK 215
Query: 86 ---VSWNCMIDGCVRV----GNVPLALEFFNRMPA--RNVVSWNSMLALHVRAKSFWECL 136
+ W +++ + + G V + F M RN V++N+M+ V + F +
Sbjct: 216 SGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFVSVERFEDAF 275
Query: 137 KMFDEMMESGEAVPNEATLVSVLTACAHL--GKLSVGMWVHSFIKSNNIKVDVLLSTCLL 194
MF +M G +E T VSVL++C L G + G+ + V+ +
Sbjct: 276 LMFRDM-HRGSVCLSEVTFVSVLSSCCSLRVGCQAQGLAIKMGFDCGYTAVN----NATM 330
Query: 195 TMYVKCGAMDLARDVFDEM-PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
TMY G ++ AR VF+ M R++VSWN M+ + E A+ +++M ++G +P+
Sbjct: 331 TMYSFFGKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDA 390
Query: 254 ATFVCVLSACTHAGMVMEGWWYFDLMRRVY--NIEPKVEHYGCIVDLLARAGLVKNSEEL 311
T+ +LSA MV +++ V N KVE ++ +R G +K + ++
Sbjct: 391 FTYGSLLSASDSLQMV-------EMIHSVLCKNGLNKVEVLNALISSYSRNGQIKRAFQI 443
Query: 312 IKYVSVK 318
++ K
Sbjct: 444 FSDLAYK 450
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 47/227 (20%)
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSV-GM 172
+ ++ N L + F+E LK+F ++ S + P+ TL + +TA + ++V G
Sbjct: 18 QQILKLNHKLTHLTKTNQFYESLKLFTKIHSSHK--PDHCTLSTTITATSKTRHVTVFGN 75
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKC-------------------------------G 201
+HSF +K ++ LL++Y K
Sbjct: 76 QLHSFAIKTALKAYSHVANSLLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAISRLS 135
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+D A VFD+MP V WN++I G +G + A L +M + + ++ TF +LS
Sbjct: 136 DIDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLS 195
Query: 262 AC-----------THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVD 297
C H+ +V G + D V ++ + GC+VD
Sbjct: 196 LCPLSEGLDYGRHVHSVVVKSG--FLDWTSVVNSLITMYFNCGCVVD 240
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 196/369 (53%), Gaps = 3/369 (0%)
Query: 63 GYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
Y G +E A LF+ M RD+ +W ++ G G++ A E F++MP +N SW ++
Sbjct: 222 AYAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTAL 281
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+ + R + L +F +M+ P+E T S L ACA + L G +H+F+ NN
Sbjct: 282 IGGYARNGMAHKALGVFRKMIMH-RVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNN 340
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP-VRNVVSWNSMIMGYGLHGNGEKALELF 241
I+ + ++ + ++ MY KCG+M+ AR +F+ +++VV WN+MI +G G++A+ +
Sbjct: 341 IRPNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAVLML 400
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
+M K G KPN T V +L+AC+H+G+V +G +F M + + P +EHY ++DLL R
Sbjct: 401 NDMLKSGVKPNRNTLVAILNACSHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLIDLLGR 460
Query: 302 AGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIM 361
AG S + + + K C + +G VA+ LI+ +P Y +
Sbjct: 461 AGCFVESMKDLFMIDCK-PGDHVLYSLLCVCRPNGSIGVGREVAEFLIKWQPHSSAAYGL 519
Query: 362 LSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSM 421
LS+ YAA W V+ R ++ E+ L+++ ++S + +E+ + V + K +YS
Sbjct: 520 LSSIYAALVTWGLVDEARHIMDERRLRQDRSTSWIEIENEVHAFTVSDGLHPLKETLYSA 579
Query: 422 LSELGAHIK 430
L L I+
Sbjct: 580 LGHLNNQIE 588
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 149/293 (50%), Gaps = 10/293 (3%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVV 86
N +I + G+ ARK+FD+M VR++++WN MI+GYV +G ++ A +F +MP++D V
Sbjct: 85 NHLIHMYFCCGDYVRARKVFDKMDVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCV 144
Query: 87 SWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
SWN M+ G G AL F+ M N ++ S+L + V+ K F C ++ ++
Sbjct: 145 SWNAMVVGYAHCGRFSEALRFYGWMRRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQV 204
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
+ G + N S++ A A GK+ M + + +I T L++ Y CG
Sbjct: 205 VVVG-FLSNVVVSSSIVDAYAKCGKMEDAMRLFDDMTVRDIPA----WTTLVSGYALCGD 259
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
MD A ++F +MP +N SW ++I GY +G KAL +F +M +P++ TF L A
Sbjct: 260 MDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKMIMHRVRPDEFTFSSCLFA 319
Query: 263 CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYV 315
C + G + R NI P +VD+ A+ G ++ + + +
Sbjct: 320 CATIASLKHGKQIHAFLLR-NNIRPNPVVVSAVVDMYAKCGSMETARRIFNFT 371
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIK-VDVLLSTCLLTMYVKCGAMDLARDVFDEM 213
L ++L C+ G VH +K K L++ L+ MY CG AR VFD+M
Sbjct: 48 LATLLRRCSDTKSYKEGKLVHLHLKLTGFKRPTTLIANHLIHMYFCCGDYVRARKVFDKM 107
Query: 214 PVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW 273
VRN+ SWN+MI GY G ++A +F +M P+ + ++ ++ H G E
Sbjct: 108 DVRNLYSWNNMISGYVKLGMMKQARGVFYKM----PEKDCVSWNAMVVGYAHCGRFSEAL 163
Query: 274 WYFDLMRRV 282
++ MRRV
Sbjct: 164 RFYGWMRRV 172
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 195/409 (47%), Gaps = 42/409 (10%)
Query: 44 KLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDV------------------ 85
+LF +M DV +W +I YV +GD E A + F+RM DV
Sbjct: 308 RLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLA 367
Query: 86 -VSWNCMIDG-CVRVGNVPL-------------------ALEFFNRMPARNVVSWNSMLA 124
W I G +R+G V A F+ M ++++SW+++++
Sbjct: 368 ITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIIS 427
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
++ + E M G PNE L SVL+ C + L G VH++ +
Sbjct: 428 VYCQGSHAKEAFNYLSWMSREGPK-PNEFALASVLSVCGSMALLEPGKQVHAYALCIGLD 486
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM 244
+ ++ + L++MY + G + A +FD + ++VSW +MI GY HG ++A+ LF +
Sbjct: 487 HETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENI 546
Query: 245 EKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGL 304
G P+ TF+ +L+AC HAG+V G++Y+ LM Y I P EHYGCI+DLL RAG
Sbjct: 547 SSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGR 606
Query: 305 VKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSN 364
+ +E +++ + C H D + A++++ L P G +I L+N
Sbjct: 607 LSEAEHMVRNMPFP-CDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLAN 665
Query: 365 TYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVH 413
Y+A GR ++ VR +++ KG+ KE S ++ D + FV H
Sbjct: 666 IYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSND-QLNTFVAGVQSH 713
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 118/287 (41%), Gaps = 43/287 (14%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------ 80
NS + +K G+ AR +F++M RD +W +IAGYV + A LF M
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147
Query: 81 -PDRDVVS---------------------------------WNCMIDGCVRVGNVPLALE 106
D+ VVS + ++D ++VG
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F M RNVVSW +++ V A + L F EM S + T L A A G
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGY-DSHTFAVALKASAESG 266
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L G +H+ + L TMY KC D +F +M +VVSW ++IM
Sbjct: 267 LLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIM 326
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGW 273
Y G+ E+AL+ F M K PN+ TF V+SAC A + + W
Sbjct: 327 TYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISAC--ANLAITKW 371
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 210/402 (52%), Gaps = 15/402 (3%)
Query: 1 MYSVFGRVSDARLLFD-----SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---PVR 52
MYS +S+A +FD SS++ L +NSM+ GHV NG+ A + M VR
Sbjct: 280 MYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVR 339
Query: 53 -DVWNWNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEF 107
D + ++ ++ + +L A+++ + D V + +ID + G++ AL
Sbjct: 340 FDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRL 399
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F R+P ++VV+W+S++ R S +F +M+ G + + + VL AC+ L
Sbjct: 400 FERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQI-DHFVISIVLKACSSLAS 458
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
G VHS + + +++T L+ MY KCG ++ A +F + + +SW S+I+G
Sbjct: 459 HQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVG 518
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
+G E+A+ L +M + G KPN T + VL+AC H+G+V E W F+ + + + P
Sbjct: 519 CAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIP 578
Query: 288 KVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKR 347
EHY C+VD+L +AG + + +LI + K C T+ + +L IVA+
Sbjct: 579 CPEHYNCMVDILGQAGRFEEAVKLISEMPFK-PDKTIWSSLLGACGTYKNRDLANIVAEH 637
Query: 348 LIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQK 389
L+ P D+ YIMLSN YAA G WD V +VR +++ G ++
Sbjct: 638 LLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIGKKR 679
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 95/164 (57%), Gaps = 4/164 (2%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
N MI + ++ A F+ MP RN+VSW +M+++ + E L +++EM+ES
Sbjct: 42 NNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIE 101
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
PN+ +VL AC + + +G VH I + VD++L LL MYVKCG++ A+
Sbjct: 102 QPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQR 161
Query: 209 VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPN 252
VF E+P +N SWN++I+GY G + A++LF +M P+P+
Sbjct: 162 VFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKM----PEPD 201
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 38/255 (14%)
Query: 14 LFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAA 73
+F + L +D+V N+++D +VK G A+++F E+P ++ +WN +I GY G ++ A
Sbjct: 131 IFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDA 190
Query: 74 NELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFW 133
+LF++MP+ D+VSWN +I G V + AL F + M +
Sbjct: 191 MKLFDKMPEPDIVSWNSIIAGLVDNAS-SRALRFVSMMHGKG------------------ 231
Query: 134 ECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCL 193
LKM +E T SVL AC +L +G +H +I + + + L
Sbjct: 232 --LKM------------DEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISAL 277
Query: 194 LTMYVKCGAMDLARDVFDEMPVRNVVS-----WNSMIMGYGLHGNGEKALELFLEMEKKG 248
+ MY C + A +FD+ + VS WNSM+ G+ ++G+ +AL + M + G
Sbjct: 278 IDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSG 337
Query: 249 PKPNDATFVCVLSAC 263
+ + TF VL C
Sbjct: 338 VRFDFYTFSIVLKIC 352
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+HS I + + + ++++Y KC ++ AR++FDEMP RN+VSW +M+
Sbjct: 25 LHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTNSSM 84
Query: 234 GEKALELFLEM-EKKGPKPNDATFVCVLSAC 263
+AL L+ EM E K +PN + VL AC
Sbjct: 85 PHEALSLYNEMIESKIEQPNQFLYSAVLKAC 115
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 216/447 (48%), Gaps = 22/447 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVS-----YNSMIDGHVKNG----ETGAARKLFDEMPV 51
MY+ G + DA +F+ DL S YN+MI G ++ G A ++F+EM
Sbjct: 192 MYAKSGCLRDAVRVFEG---FDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRR 248
Query: 52 RDV----WNWNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPL 103
V + ++ ++ V GD E ++ + + D + ++D G +
Sbjct: 249 MGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDD 308
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
L F P +VVSW S +A V+ F L +F + G + +E + SV+ ACA
Sbjct: 309 GLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKL-DEFIVSSVMGACA 367
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
+ G + + + ++ + MY K G +D AR+ F E +VVSW+
Sbjct: 368 DMAAARTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSV 427
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
MI Y HG +++L LF M G PN T + VL+AC+H G+V EG Y++ M++ Y
Sbjct: 428 MICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDY 487
Query: 284 NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEI 343
+ V+H CIVDLL RAG ++ ++ I Y S C H D+E+G+
Sbjct: 488 GMAANVKHSACIVDLLGRAGRLEEAQRFI-YDSGFEDDPVLWRALLGACKVHKDTEMGKR 546
Query: 344 VAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFES 403
+A ++IELEP + Y++L N Y G+ VR +++++G++KE S + + +
Sbjct: 547 IADKVIELEPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVH 606
Query: 404 KYFVKNYSVHRKRIMYSMLSELGAHIK 430
+ V + S ++YS L EL A IK
Sbjct: 607 TFLVDDRSHPISELIYSRLGELLAKIK 633
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVR---AKSFWECLKMFDEMMES 145
N +I+ + + + F+ ++ VSWNS+++ + + S+ E ++ M
Sbjct: 81 NSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRF 140
Query: 146 GEAVPNEATLVSVLTACAHL--GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
G A ++ TL SVL AC G +H F + +V+++T LL MY K G +
Sbjct: 141 GYAF-SDYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCL 199
Query: 204 DLARDVFD--EMPVRNVVSWNSMIMGYGLHG----NGEKALELFLEMEKKGPKPNDATFV 257
A VF+ ++ +N +N+MI G+ G N +A+ +F EM + G K + TF
Sbjct: 200 RDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFS 259
Query: 258 CVLSACTHAG 267
V+ AC G
Sbjct: 260 SVVKACVGNG 269
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNI--KVDVLLSTCLLTMYVKCGAMDLARDVF 210
L ++L+ CA L +G +H+ I N K L++ L+ MY KC + +R +F
Sbjct: 42 TNLTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNS-LINMYSKCNQIQTSRFLF 100
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELF---LEMEKKGPKPNDATFVCVLSAC 263
D +++ VSWNS+I Y G E+F M + G +D T VL+AC
Sbjct: 101 DNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNAC 156
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 225/455 (49%), Gaps = 44/455 (9%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+ S+L +L +++ + K AR +F++MP +DV WN MI+ Y G +
Sbjct: 242 LVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKE 301
Query: 73 ANEL-------------FERMP--------------------------DRDVVSWNCMID 93
+ EL F +P D V N ++D
Sbjct: 302 SLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVD 361
Query: 94 GCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEA 153
++ A + F + R VVSW++M+ + + E L +F EM SG V +
Sbjct: 362 MYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKV-DLV 420
Query: 154 TLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDE- 212
++++L A A +G L ++H + N+ L T LL Y KCG +++AR +F+E
Sbjct: 421 IVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEE 480
Query: 213 -MPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
++++V+WNSMI Y HG + EL+ +++ KP+ TF+ +L+AC ++G+V +
Sbjct: 481 KSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDK 540
Query: 272 GWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXX 331
G F M +Y +P EH C+VDLL RAG + + ++I+ +
Sbjct: 541 GKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDEARKIIETNQLN-SDARVYGPLLSA 599
Query: 332 CTTH-MDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKE 390
C H ++++ E+ A++LI++EP + Y++LSN +AA G+WD ++R +R++GL+K
Sbjct: 600 CKMHGLETDFAELAAEKLIKMEPENPANYVLLSNIFAAAGKWDKFAKMRSFLRDRGLKKT 659
Query: 391 AASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
S V L+ ++ V ++S R +YS+L L
Sbjct: 660 PGCSWVVLDGQFHEFRVADHSHPRSEDIYSVLKVL 694
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 12/271 (4%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVW-NWNCM 60
YS FG + + +F + D + YN+ + GE L+ EM + + + +C
Sbjct: 63 YSNFGLLHFSHKIFSFTENPDSIIYNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCC 122
Query: 61 IAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFF---NRMPARNVV 117
+ ++ + L M VV +D VGN + L F N + R V
Sbjct: 123 FSVLKSLFYVFHEKGLI-MMAHGHVVKLG--MDAFDLVGNTLIELYGFLNGNGLVERKSV 179
Query: 118 S----WNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
+ WN+++ + E ++F M + PN TL+++L A L +G
Sbjct: 180 TKLNFWNNLIYEAYESGKIVESFELFCRM-RNENVQPNSVTLINLLRATVESNSLKIGKV 238
Query: 174 VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGN 233
+HS + ++N+ ++ ++T LL+MY K ++ AR +F++MP ++VV WN MI Y G
Sbjct: 239 LHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGC 298
Query: 234 GEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+++LEL M + G +P+ T + +S+ T
Sbjct: 299 PKESLELVYCMVRSGIRPDMFTAIPAISSIT 329
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 216/447 (48%), Gaps = 22/447 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVS-----YNSMIDGHVKNG----ETGAARKLFDEMPV 51
MY+ G + DA +F+ DL S YN+MI G ++ G A ++F+EM
Sbjct: 192 MYAKSGCLRDAVRVFEG---FDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRR 248
Query: 52 RDV----WNWNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPL 103
V + ++ ++ V GD E ++ + + D + ++D G +
Sbjct: 249 MGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDD 308
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACA 163
L F P +VVSW S +A V+ F L +F + G + +E + SV+ ACA
Sbjct: 309 GLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKL-DEFIVSSVMGACA 367
Query: 164 HLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNS 223
+ G + + + ++ + MY K G +D AR+ F E +VVSW+
Sbjct: 368 DMAAARTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSV 427
Query: 224 MIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVY 283
MI Y HG +++L LF M G PN T + VL+AC+H G+V EG Y++ M++ Y
Sbjct: 428 MICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDY 487
Query: 284 NIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEI 343
+ V+H CIVDLL RAG ++ ++ I Y S C H D+E+G+
Sbjct: 488 GMAANVKHSACIVDLLGRAGRLEEAQRFI-YDSGFEDDPVLWRALLGACKVHKDTEMGKR 546
Query: 344 VAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFES 403
+A ++IELEP + Y++L N Y G+ VR +++++G++KE S + + +
Sbjct: 547 IADKVIELEPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVH 606
Query: 404 KYFVKNYSVHRKRIMYSMLSELGAHIK 430
+ V + S ++YS L EL A IK
Sbjct: 607 TFLVDDRSHPISELIYSRLGELLAKIK 633
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 12/190 (6%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVR---AKSFWECLKMFDEMMES 145
N +I+ + + + F+ ++ VSWNS+++ + + S+ E ++ M
Sbjct: 81 NSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRF 140
Query: 146 GEAVPNEATLVSVLTACAHL--GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAM 203
G A ++ TL SVL AC G +H F + +V+++T LL MY K G +
Sbjct: 141 GYAF-SDYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCL 199
Query: 204 DLARDVFD--EMPVRNVVSWNSMIMGYGLHG----NGEKALELFLEMEKKGPKPNDATFV 257
A VF+ ++ +N +N+MI G+ G N +A+ +F EM + G K + TF
Sbjct: 200 RDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFS 259
Query: 258 CVLSACTHAG 267
V+ AC G
Sbjct: 260 SVVKACVGNG 269
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 153 ATLVSVLTACAHLGKLSVGMWVHSFIKSNNI--KVDVLLSTCLLTMYVKCGAMDLARDVF 210
L ++L+ CA L +G +H+ I N K L++ L+ MY KC + +R +F
Sbjct: 42 TNLTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNS-LINMYSKCNQIQTSRFLF 100
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELF---LEMEKKGPKPNDATFVCVLSAC 263
D +++ VSWNS+I Y G E+F M + G +D T VL+AC
Sbjct: 101 DNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNAC 156
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 221/466 (47%), Gaps = 42/466 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
Y+ FG + D LF+ D++++ M+ +++ G K+FDEMP ++ +N +
Sbjct: 311 FYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGFVDLGLKIFDEMPEKNCVTYNVL 370
Query: 61 IAGYVAVGDLEAANELFERMPDRDV----VSWNCMIDGC--------------------- 95
++G + A ELF RM + V S + I+ C
Sbjct: 371 LSGLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGINACSLLADYRVSRQMHGFAIKFGF 430
Query: 96 --------------VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
R G + A + + + + V W SM+ + R E +F
Sbjct: 431 GSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARNGQPREAFSLFHL 490
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
+ + +E L S+L+ C +G +G +H + +V + ++ MY KCG
Sbjct: 491 GHSEWKLIMDEVALTSMLSLCGTVGYHDMGKQIHCQVLKFGFHSNVQVGNVVVEMYFKCG 550
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+D A +F M ++VSWN++I GY H G++ALE++L+M+++G KP+D TFV ++S
Sbjct: 551 NVDDAIKMFSGMASTDIVSWNTLISGYLTHRQGDRALEIWLKMQEEGIKPDDITFVLIIS 610
Query: 262 AC--THAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKX 319
A T +V + F+ M+ VY+IEP +HY + +L GL++ + E I +S K
Sbjct: 611 AYRQTSLNLVDDCRILFNSMKTVYHIEPTSQHYSSFISVLGHWGLLEEALETINKMSFK- 669
Query: 320 XXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVR 379
C H ++ +G++ AK ++ LEP D YI++SN +++ GRWD ER R
Sbjct: 670 PSAFVWRALLDGCRLHKNTMIGKLAAKNILALEPNDPSTYILVSNLHSSSGRWDCSERTR 729
Query: 380 VMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSEL 425
+REKG +K A S + ++ ++ S + + +Y L L
Sbjct: 730 ENMREKGFRKHPAQSWIICRKKMHSFYARDRSHQQDKDIYRGLEIL 775
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 1/184 (0%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
N +I Y GD++ LFERM RDV++W M+ + G V L L+ F+ MP +N V
Sbjct: 306 NALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGFVDLGLKIFDEMPEKNCV 365
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSF 177
++N +L+ R + +++F M+E G + + +L S + AC+ L V +H F
Sbjct: 366 TYNVLLSGLCRNAEGLKAVELFIRMVEEGVEL-TDFSLSSGINACSLLADYRVSRQMHGF 424
Query: 178 IKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKA 237
+V + LL MY +CG M A +++E+ + V W SM+ GY +G +A
Sbjct: 425 AIKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARNGQPREA 484
Query: 238 LELF 241
LF
Sbjct: 485 FSLF 488
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F ++ P N+VS++++++ ++ + L +F M+ PN T V+VLTAC +
Sbjct: 121 FLSQSPP-NIVSYSALISAFSKSNREKQSLFLFLHMITVSSLRPNHYTYVAVLTACTRIL 179
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
L G+ +H+ + V +S L+ Y KCG A VFDEMP R++ SWN+++
Sbjct: 180 NLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFKVFDEMPERDIASWNTVMS 239
Query: 227 GYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ LF +M G K + T L+AC +G++MEG
Sbjct: 240 CAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAASGLLMEG 286
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 48/300 (16%)
Query: 9 SDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPV-----RDVWNWNCMIAG 63
S A LF S ++VSY+++I K+ + LF M + + + ++
Sbjct: 115 SYAHRLFLSQSPPNIVSYSALISAFSKSNREKQSLFLFLHMITVSSLRPNHYTYVAVLTA 174
Query: 64 YVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
+ +L+ +L + + V N ++ + G A + F+ MP R++ SW
Sbjct: 175 CTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFKVFDEMPERDIASW 234
Query: 120 NSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIK 179
N++++ V+ + + ++F +M+ + TL + LTACA G L G VH
Sbjct: 235 NTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAASGLLMEGKQVH---- 290
Query: 180 SNNIKV-----------------------------------DVLLSTCLLTMYVKCGAMD 204
++ +KV DV+ T ++ +Y++ G +D
Sbjct: 291 AHAVKVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGFVD 350
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
L +FDEMP +N V++N ++ G + G KA+ELF+ M ++G + D + ++AC+
Sbjct: 351 LGLKIFDEMPEKNCVTYNVLLSGLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGINACS 410
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 203/406 (50%), Gaps = 18/406 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
MYS G ++ + +FD L D+V++N+++ ++ G+ A ++ EM +V +
Sbjct: 102 MYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFT 161
Query: 57 WNCMIAGYVAVGDLEAANE---LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
++ ++ LE + L M VV +ID VG V AL F +
Sbjct: 162 LCSVLKCCASLKALEFGRQVHGLVVAMGRDLVVLSTALIDFYSSVGCVHHALNVFYGLKG 221
Query: 114 -RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
++ + NS+++ ++ + E K+ + PN L SVL C+ L G
Sbjct: 222 WKDDMIHNSLVSGCIKNGRYREAFKVMSLVK------PNAVALTSVLVCCSEESDLLTGK 275
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
VH + L LL MY KCG + A VFD + ++V+SW MI GYG +G
Sbjct: 276 QVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSVFDGIFQKDVISWTCMIDGYGRNG 335
Query: 233 NGEKALELFLEMEKKGPK--PNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVE 290
G +A+ELF +M + G + PN TF+ VLSAC H+G+V EG F++M+ Y I+P+ E
Sbjct: 336 CGYEAVELFWKMMEDGSEVLPNSVTFLSVLSACGHSGLVEEGKQCFNIMKEKYGIDPEPE 395
Query: 291 HYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXX--XXXXXCTTHMDSELGEIVAKRL 348
HY C +D+L RAG ++ + + + C+ D E GE AK L
Sbjct: 396 HYACFIDILGRAGKIEEVWSAYQNMIDQGTSPTAGVWISLLNACSLGQDFERGEFAAKSL 455
Query: 349 IELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
++LEP ++ SN YAA GRWD V +R M+REKGL KEA +S
Sbjct: 456 LQLEPNKASNIVLASNFYAAIGRWDCVGELRSMMREKGLVKEAGNS 501
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 52/96 (54%)
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
S+G +HS + + T LL MY + G+++ + VFDEM R+VV+WN+++ +
Sbjct: 75 SLGKQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCF 134
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
G ++A+ + EM ++ + ++ T VL C
Sbjct: 135 LRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCA 170
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 201/424 (47%), Gaps = 48/424 (11%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+ S L ++ N+ + V+NG+ A ++F+ P+RD WN M+ GY LE
Sbjct: 84 LVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGY-----LEF 138
Query: 73 ANE---LFERMPDR-----DVVSWNCMIDGCVRVGNVPLALEFFNRMP----ARNVVSWN 120
++E +F R +R D ++ + G + ++ + ++ ++ ++ N
Sbjct: 139 SSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGN 198
Query: 121 SMLALHVRAKSFWECLKMFDEM---------------MESGE---------------AVP 150
S++ ++++ + E K FDE+ ++ GE P
Sbjct: 199 SLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKP 258
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
N+ TL + L ACA L + G H VDV + LL MY KCG MD A VF
Sbjct: 259 NKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVF 318
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVM 270
R+VVSW +MIM +G +AL++F EM++ +PN TF+CVL AC+ G V
Sbjct: 319 RSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVD 378
Query: 271 EGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXX 330
EGW Y M + Y I P +HY C+V +L RAGL+K ++ELI +
Sbjct: 379 EGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFH-PGVRVWQTLLS 437
Query: 331 XCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKE 390
C H D E G++ A+ I+ + D Y++LSN A WD V +R ++ + ++K
Sbjct: 438 ACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKKV 497
Query: 391 AASS 394
SS
Sbjct: 498 PGSS 501
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 141/317 (44%), Gaps = 45/317 (14%)
Query: 33 HVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM-------PDR-- 83
++K + +A +LFDEMP R+V +W+ ++ G V G A LF M P+
Sbjct: 2 YIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFT 61
Query: 84 -------------------------------DVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+V N + VR G + AL+ F P
Sbjct: 62 FVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSP 121
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
R+ V+WN+M+ ++ S E + +F M P+E T S LT A + L +GM
Sbjct: 122 IRDTVTWNTMMGGYLEFSS--EQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGM 179
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHG 232
VH+ + + D+ + L+ MY+K ++ FDE+P ++V SW M G G
Sbjct: 180 QVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWG 239
Query: 233 NGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRV-YNIEPKVEH 291
AL + +M+K G KPN T L+AC + EG + L ++ +++ V++
Sbjct: 240 EPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDN 299
Query: 292 YGCIVDLLARAGLVKNS 308
++D+ A+ G + ++
Sbjct: 300 --ALLDMYAKCGCMDSA 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 196 MYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG-PKPNDA 254
MY+KC + A +FDEMP RNVVSW+S++ G +G AL LF M ++G KPN+
Sbjct: 1 MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEF 60
Query: 255 TFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKY 314
TFV L AC+ + V + + + L+ R +E V + L R G + + ++ +
Sbjct: 61 TFVSALQACSLSENVTQAYQIYSLVVR-SGLECNVFLLNAFLTALVRNGKLTEALQIFET 119
Query: 315 VSVK 318
++
Sbjct: 120 SPIR 123
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 14/262 (5%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
MY ++ + FD D+ S+ M DG ++ GE A + +M V +
Sbjct: 203 MYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFT 262
Query: 57 WNCMIAGYVAVGDLEAANEL----FERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ + +E + + D DV N ++D + G + A F
Sbjct: 263 LATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTN 322
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG- 171
+R+VVSW +M+ + E L++FDEM E+ PN T + VL AC+ G + G
Sbjct: 323 SRSVVSWTTMIMACAQNGQPGEALQIFDEMKET-SVEPNYITFICVLYACSQGGFVDEGW 381
Query: 172 MWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGL 230
++ S K I C++++ + G + A+++ MP V W +++ +
Sbjct: 382 KYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQI 441
Query: 231 HGN---GEKALELFLEMEKKGP 249
HG+ G+ A E ++ +K P
Sbjct: 442 HGDVETGKLAAEHAIKHDKNDP 463
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 203/406 (50%), Gaps = 19/406 (4%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGE-TGAARKLFDEMPVRDVWNWNC 59
+Y+ FG + D LF D+V++NSMI + G+ G +LF E+ R
Sbjct: 353 LYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQEL--RRTTFLQI 410
Query: 60 MIAGYVAV-------GDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEFF 108
A VAV DL A ++ + R + N ++ + A + F
Sbjct: 411 QGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAF 470
Query: 109 NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKL 168
+ ++ SW+S++ + + + L++ EM++ G + +L ++AC+ L +
Sbjct: 471 VDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTS-YSLPLCISACSQLLTI 529
Query: 169 SVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
S G +H F + DV + + ++ MY KCG ++ + VFDE N V++N++I GY
Sbjct: 530 SEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGY 589
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPK 288
HG ++A+E+ ++EK G PN TF+ ++SAC+HAG V E F LM Y I+PK
Sbjct: 590 AHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPK 649
Query: 289 VEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRL 348
EHY C+VD RAG ++ + ++++ K C H + ++GE A ++
Sbjct: 650 SEHYSCLVDAYGRAGRLEEAYQIVQ----KDGSESAWRTLLSACRNHSNRKIGEKSAMKM 705
Query: 349 IELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
IEL P D PYI+LSN Y +G W++ R + + ++K+ +S
Sbjct: 706 IELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKIRVKKDPGNS 751
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 43/277 (15%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------ 80
N+++ + K+ A KLFD+MP R+V W +I+ ++ G + A E+F M
Sbjct: 46 NTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDER 105
Query: 81 -------------PDRDVVSWNCMIDGC-VRVG--------------------NVPLALE 106
+R++ S I G VR G ++ AL
Sbjct: 106 PNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALR 165
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
F + R+VV+WN M++ + F ++F EM E P+ T S+L C+ L
Sbjct: 166 VFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLN 225
Query: 167 KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIM 226
++ M +H + +VDV++ + ++ +Y KC + R +FD M ++ W+SMI
Sbjct: 226 EV---MQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMIS 282
Query: 227 GYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
GY ++ GE+A+ F +M ++ K + L AC
Sbjct: 283 GYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKAC 319
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 112/221 (50%), Gaps = 20/221 (9%)
Query: 89 NCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEA 148
N ++ + N A + F++MP RNVV+W ++++ H++ S + +MF+ M S E
Sbjct: 46 NTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDER 105
Query: 149 VPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARD 208
PNE T +L AC + SVG+ +H + ++ + + L+ MY+K G D RD
Sbjct: 106 -PNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGG--DDLRD 162
Query: 209 ---VFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEM-EKKGPKPNDATFVCVLSACT 264
VF + R+VV+WN MI G+ +G+ LF EM E++G KP+ TF +L C+
Sbjct: 163 ALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCS 222
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLV 305
++ V I V +G VD++ + +V
Sbjct: 223 -------------VLNEVMQIHGIVYKFGAEVDVVVESAMV 250
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 41/291 (14%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGET-GAARKLFDEMPVRDVWNWNCMIAGYVAVGDLE 71
LL L + + +S++ ++K G+ A ++F + RDV WN MI+G+ GD
Sbjct: 133 LLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFR 192
Query: 72 AANELFERM-------PDR------------------------------DVVSWNCMIDG 94
LF M PDR DVV + M+D
Sbjct: 193 MVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEVMQIHGIVYKFGAEVDVVVESAMVDL 252
Query: 95 CVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEAT 154
+ +V + F+ M ++ W+SM++ + E + F +M + ++
Sbjct: 253 YAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKL-DQHV 311
Query: 155 LVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
L S L AC + L+ G+ VH + N + D +++ LL +Y G + +F +
Sbjct: 312 LSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRID 371
Query: 215 VRNVVSWNSMIMGYGLHGNG-EKALELFLEMEKKG-PKPNDATFVCVLSAC 263
+++V+WNSMI+ G G + ++LF E+ + + AT V VL +C
Sbjct: 372 DKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSC 422
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 139/358 (38%), Gaps = 84/358 (23%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMP---------- 50
+Y+ VS R +FDS D ++SMI G+ N A F +M
Sbjct: 252 LYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHV 311
Query: 51 ------------------------VRDVWNWNCMIAG-----YVAVGDLEAANELFERMP 81
+++ +C +A Y + G+L +LF R+
Sbjct: 312 LSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRID 371
Query: 82 DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDE 141
D+D+V+WN MI R G + C+++F E
Sbjct: 372 DKDIVAWNSMILAQARPG------------------------------QGCGRCMQLFQE 401
Query: 142 MMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCG 201
+ + ATLV+VL +C L G +HS I +++ L+ L+ MY +C
Sbjct: 402 LRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECK 461
Query: 202 AMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLS 261
+D A F ++ ++ SW+S+I + KALEL EM +G + +S
Sbjct: 462 QIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCIS 521
Query: 262 ACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGC-------IVDLLARAGLVKNSEELI 312
AC+ + EG V+ I+ Y C I+D+ A+ G ++ SE++
Sbjct: 522 ACSQLLTISEGKQL-----HVFAIKSG---YSCDVYIGSSIIDMYAKCGNIEESEKVF 571
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 189 LSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
L+ LL+ Y K A +FD+MP RNVV+W ++I + +G+ KA E+F M
Sbjct: 44 LANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSD 103
Query: 249 PKPNDATFVCVLSACTH 265
+PN+ TF +L ACT+
Sbjct: 104 ERPNENTFAVLLRACTN 120
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 202/413 (48%), Gaps = 31/413 (7%)
Query: 4 VFGRVSDA-RLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIA 62
V G++ DA RLL+ + + +Y+ M+ + G R++ M +I
Sbjct: 34 VSGKLEDAIRLLYRTGFPVHPRTYSLMLQECIFWKNYGRGRRIHAHM----------IIV 83
Query: 63 GYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSM 122
GYV E + + ++ + + G + A FN + ++ +WN+M
Sbjct: 84 GYVPN----------EYLKIKLLILY-------AKSGCLETAQFLFNNLVEKDSFAWNAM 126
Query: 123 LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNN 182
+A +V+ L+ F EM ++ P++ T SV ACA L L G H +
Sbjct: 127 IAGYVQKGLEEVGLETFYEMRQA-SLRPDQYTFASVFRACATLALLEPGRQAHGVMLKCQ 185
Query: 183 IKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
I +V++++ L+ MY KC + R +FD+ RN ++W ++I GYG HG + L+ F
Sbjct: 186 IGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISGYGKHGQVVEVLDSFH 245
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
M + +PN TF+ VL AC+H G++ E + YF M R Y + P +HY +VDLL R+
Sbjct: 246 RMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQSMIRDYEMVPHAKHYAAMVDLLGRS 305
Query: 303 GLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIML 362
G +K + E + K C H D +L +I +K+ E E ++ G Y++L
Sbjct: 306 GKLKEAYEFVLKSPYK-EHSVIWGALLGACKIHGDLDLLKIASKKYFEFERVNTGKYVVL 364
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRK 415
+N YA+ G WDDVE VR +RE G+ KE S + ++ E +F HR+
Sbjct: 365 ANAYASSGLWDDVEEVRASLRESGVTKEPGYSRIEVQK-EVSFFFNGDKYHRQ 416
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 126/281 (44%), Gaps = 18/281 (6%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM---PVR-DVWN 56
+Y+ G + A+ LF++ + D ++N+MI G+V+ G + F EM +R D +
Sbjct: 98 LYAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYT 157
Query: 57 WNCMIAGYVAVGDLEAANE----LFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ + + LE + + + +VV + +ID + + F++
Sbjct: 158 FASVFRACATLALLEPGRQAHGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCL 217
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+RN ++W ++++ + + E L F M+ S PN T ++VL AC+H+G +
Sbjct: 218 SRNTITWTTLISGYGKHGQVVEVLDSFHRMI-SESFRPNYVTFLAVLVACSHVGLIDEAY 276
Query: 173 -WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGL 230
+ S I+ + ++ + + G + A + + P + + V W +++ +
Sbjct: 277 KYFQSMIRDYEMVPHAKHYAAMVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLGACKI 336
Query: 231 HGNGEK---ALELFLEMEKKGPKPNDATFVCVLSACTHAGM 268
HG+ + A + + E E + N +V + +A +G+
Sbjct: 337 HGDLDLLKIASKKYFEFE----RVNTGKYVVLANAYASSGL 373
>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:15006779-15004629 | 20130731
Length = 675
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/488 (29%), Positives = 210/488 (43%), Gaps = 106/488 (21%)
Query: 22 DLVSYNSMIDGHVKNGETGAARKLFDEM--PVRDVWNWNCMIAGYVAVGDLEAANELFER 79
DL N++ID + K AR +FDE+ RDV W MI GY GD A +LF
Sbjct: 127 DLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSE 186
Query: 80 M--------PDRDVVSW-----------------------------------NCMIDGCV 96
M P+ +S NC+ID
Sbjct: 187 MFKFDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLIDMYS 246
Query: 97 RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES----------- 145
+ G+V A F+ M RN +SW S+L + + ++FDEM +
Sbjct: 247 KSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALSFGNGGSWN 306
Query: 146 ----GEA-----------------VPNEATLVSVLTACAHLGKLSVGMWVHSFI-KSNNI 183
G+A VPN+ T+ VL +CA L L G +H+ + + ++
Sbjct: 307 RFVXGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFGKQIHAHVLRRSHS 366
Query: 184 KVDVLL-STCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFL 242
DVL + CL+ MY K G +D A+ VFD M RN VSW S++ GYG+HG E A +F
Sbjct: 367 NSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFD 426
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
EM K+ + TF+ VL AC +HY C+VDLL RA
Sbjct: 427 EMRKEALVLDGITFLVVLYAC--------------------------KHYACMVDLLGRA 460
Query: 303 GLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIML 362
G + + LI + ++ C H + EL E AK+L+EL+ + G Y +L
Sbjct: 461 GRLGEAMRLINDMPIE-PTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLL 519
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFESKYFVKNYSVHRKRIMYSML 422
SN YA RW DV R+ +++ G++K S V ++V + + + + +Y L
Sbjct: 520 SNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETL 579
Query: 423 SELGAHIK 430
++L IK
Sbjct: 580 ADLIKRIK 587
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 170/398 (42%), Gaps = 89/398 (22%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWNCMIAGYV 65
DA +++ D+V++N+M+ G+ +NG A LF +M DV W+ +I+GY
Sbjct: 3 DASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISGYA 62
Query: 66 AVGDLEAANELFERM--------------------------------------------- 80
G A ++F +M
Sbjct: 63 QRGFGCEAMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILKGEHN 122
Query: 81 -PDRDVVSWNCMIDGCVRVGNVPLALEFFNRM--PARNVVSWNSMLALHVRAKSFWECLK 137
+ D+ N +ID + ++ +A F+ + R+VV+W M+ + + L+
Sbjct: 123 DDNDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQ 182
Query: 138 MFDEMMESGEA-VPNEATLVSVLTACAHLGKLSVGMWVHSFI-KSNNIKVDVLL-STCLL 194
+F EM + VPN+ T+ VL +CA L L G +H+++ + + I DVL + CL+
Sbjct: 183 LFSEMFKFDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLI 242
Query: 195 TMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPK---- 250
MY K G +D A+ VFD M RN +SW S++ GYG+HG E A +F EM K+
Sbjct: 243 DMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALSFGNG 302
Query: 251 -----------------------------PNDATFVCVLSACTHAGMVMEG-WWYFDLMR 280
PND T CVL +C + G + ++R
Sbjct: 303 GSWNRFVXGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFGKQIHAHVLR 362
Query: 281 RVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVK 318
R ++ + C++D+ +++G V ++ + +S +
Sbjct: 363 RSHSNSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKR 400
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 140/265 (52%), Gaps = 17/265 (6%)
Query: 70 LEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR----NVVSWNSMLAL 125
+E A++++ERM +DVV+WN M+ G + G AL F +M +VV+W+S+++
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISG 60
Query: 126 HVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFI------- 178
+ + E + +F +M PN L+S+L+ACA +G L G H +
Sbjct: 61 YAQRGFGCEAMDVFRKMC-GCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILKG 119
Query: 179 KSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEM--PVRNVVSWNSMIMGYGLHGNGEK 236
+ N+ D+ + L+ MY KC ++++AR +FDE+ R+VV+W MI GY +G+
Sbjct: 120 EHNDDNDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANH 179
Query: 237 ALELFLEMEK--KGPKPNDATFVCVLSACTH-AGMVMEGWWYFDLMRRVYNIEPKVEHYG 293
AL+LF EM K PND T CVL +C + ++ + ++RR +
Sbjct: 180 ALQLFSEMFKFDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVAN 239
Query: 294 CIVDLLARAGLVKNSEELIKYVSVK 318
C++D+ +++G V ++ + +S +
Sbjct: 240 CLIDMYSKSGDVDTAQVVFDSMSKR 264
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 169/303 (55%), Gaps = 13/303 (4%)
Query: 96 VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRA-----------KSFWECLKMFDEMME 144
++ G + A F M N+V+WN+M+A H + + E L +F ++
Sbjct: 330 LKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNR 389
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMD 204
SG P+ T SVL+ C+ + L G +H+ DV++ + ++ MY KCG+++
Sbjct: 390 SGMK-PDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIE 448
Query: 205 LARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
A VF EM +R ++ W +MI G+ HG ++AL LF +M+ G +PN TFV VLSAC
Sbjct: 449 RASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACG 508
Query: 265 HAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXX 324
AGMV E + YF++M++ Y I+P ++HY C+VD+L R G V+ + +LIK + K
Sbjct: 509 SAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYK-ASEFI 567
Query: 325 XXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIRE 384
C + + ELG A++L+ L+P D Y +L N Y + GR+DDV RV ++RE
Sbjct: 568 WSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAGRYDDVSRVENIMRE 627
Query: 385 KGL 387
+ +
Sbjct: 628 EKI 630
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 139/298 (46%), Gaps = 30/298 (10%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCM 60
+Y+ GR+ A+ +FD + V++ +++ G+V+N A LF+EM + + C
Sbjct: 122 VYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEM----LLHSECY 177
Query: 61 IAGYVAVGDLEAANEL-------------FERMPDRDVVSWNCMIDGCVRVG-NVPLALE 106
+ Y L A L + D D N + + G + + L
Sbjct: 178 PSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLT 237
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM-ESGEAVPNEATLVSVLTACAHL 165
F R+ ++V+SW + ++ + +++F EM+ + + PNE TL S L+ C +
Sbjct: 238 AFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEV 297
Query: 166 GKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
L +G+ VH+ + ++ + LL +Y+KCG + A+ +F M N+V+WN+MI
Sbjct: 298 KCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMI 357
Query: 226 MGYG-----------LHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
G+ + G +AL LF ++ + G KP+ TF VLS C+ + +G
Sbjct: 358 AGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQG 415
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F ES E V + + +L C S +H I D LS+ L+T+Y
Sbjct: 66 FSLAKESNEEV-DSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYA 124
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATFV 257
KCG M+ A+ VFD M RN V+W +++ GY + + A+ LF EM P++ T
Sbjct: 125 KCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLA 184
Query: 258 CVLSACT 264
L+ACT
Sbjct: 185 IALNACT 191
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 136/310 (43%), Gaps = 38/310 (12%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGA-----------ARKLFDEM 49
+Y G + +A+ LF ++LV++N+MI GH + E A LF ++
Sbjct: 328 LYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKL 387
Query: 50 PVR----DVWNWNCMIAGYVAVGDLEAANELFERMPD----RDVVSWNCMIDGCVRVGNV 101
D + ++ +++ + LE ++ R DVV + MI+ + G++
Sbjct: 388 NRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSI 447
Query: 102 PLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTA 161
A + F M R ++ W +M+ + + L +F++M G PN T V VL+A
Sbjct: 448 ERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVG-IRPNLVTFVGVLSA 506
Query: 162 CAHLGKLSVGM-WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVV 219
C G ++ + K IK + CL+ M V+ G + A D+ +M + +
Sbjct: 507 CGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIKKMDYKASEF 566
Query: 220 SWNSMIMGYGLHGN---GEKALELFLEMEKKGPKPNDA-TFVCVLSACTHAGMVMEGWWY 275
W+++I+G GN G A E L + KP D T+ +L+A AG
Sbjct: 567 IWSNLIVGCLSQGNLELGCDAAEKLLSL-----KPKDTETYKLLLNAYVSAGR------- 614
Query: 276 FDLMRRVYNI 285
+D + RV NI
Sbjct: 615 YDDVSRVENI 624
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 161/287 (56%), Gaps = 4/287 (1%)
Query: 99 GNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSV 158
GN+ A + F+ +P +N++ W S+++ +V + L++F +M P++ L +
Sbjct: 125 GNLFDAHQVFDEIPEKNIICWTSLISAYVENHKSNKGLELF-RLMLMNNVEPDQIVLTTA 183
Query: 159 LTACAHLGKLSVGMWVHSFIK-SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRN 217
L+ACA G L +G W+H F++ +K+D+ L+ L+ MY KCG + AR +FD ++
Sbjct: 184 LSACADAGGLEMGEWIHDFVRRKQGMKIDLHLNNALINMYAKCGDIGNARKLFDNTRNKD 243
Query: 218 VVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFD 277
V +W SMI+G+ +HG +AL+LF EM PND TF+ VL AC+HAG+V EG F
Sbjct: 244 VTTWTSMIVGHAVHGEAREALQLFSEMNFI-VSPNDVTFIGVLMACSHAGLVEEGKRNFR 302
Query: 278 LMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMD 337
M Y IEP+ H+GC+VDL R+G ++ + + I + V C+ H +
Sbjct: 303 SMNEDYGIEPREPHFGCMVDLFCRSGHLREAYDFIMEMPVP-PNAVMWRTLLGACSLHGN 361
Query: 338 SELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIRE 384
+L V +LI L+P +G + LSN YA + WD VR I++
Sbjct: 362 LKLATEVRDKLINLDPGYVGDSVALSNIYADKEMWDKKIIVRNQIKQ 408
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 130 KSFWEC------LKMFDEMMESGEAVPNEA---TLVSVLTACAHLGKLSV-GMWVHSFIK 179
K++ EC + +F ++E N + + L AC + V G +HS I
Sbjct: 44 KNYLECNNHTTVVLLFKTLLEQKSPTFNSIDSFSFLYTLKACINKNHSYVLGKQLHSLII 103
Query: 180 SNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALE 239
+ + L T LL +Y G + A VFDE+P +N++ W S+I Y + K LE
Sbjct: 104 KFGYESIIQLQTSLLKVYAGGGNLFDAHQVFDEIPEKNIICWTSLISAYVENHKSNKGLE 163
Query: 240 LFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLL 299
LF M +P+ LSAC AG + G W D +RR ++ + ++++
Sbjct: 164 LFRLMLMNNVEPDQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKIDLHLNNALINMY 223
Query: 300 ARAGLVKNSEELI 312
A+ G + N+ +L
Sbjct: 224 AKCGDIGNARKLF 236
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 44/255 (17%)
Query: 28 SMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------P 81
S++ + G A ++FDE+P +++ W +I+ YV ELF M P
Sbjct: 116 SLLKVYAGGGNLFDAHQVFDEIPEKNIICWTSLISAYVENHKSNKGLELFRLMLMNNVEP 175
Query: 82 DRDVVS----------------W------------------NCMIDGCVRVGNVPLALEF 107
D+ V++ W N +I+ + G++ A +
Sbjct: 176 DQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKIDLHLNNALINMYAKCGDIGNARKL 235
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F+ ++V +W SM+ H E L++F EM + PN+ T + VL AC+H G
Sbjct: 236 FDNTRNKDVTTWTSMIVGHAVHGEAREALQLFSEM--NFIVSPNDVTFIGVLMACSHAGL 293
Query: 168 LSVGMW-VHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV-RNVVSWNSMI 225
+ G S + I+ C++ ++ + G + A D EMPV N V W +++
Sbjct: 294 VEEGKRNFRSMNEDYGIEPREPHFGCMVDLFCRSGHLREAYDFIMEMPVPPNAVMWRTLL 353
Query: 226 MGYGLHGNGEKALEL 240
LHGN + A E+
Sbjct: 354 GACSLHGNLKLATEV 368
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 13/135 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWN---- 56
MY+ G + +AR LFD++ D+ ++ SMI GH +GE A +LF EM N
Sbjct: 222 MYAKCGDIGNARKLFDNTRNKDVTTWTSMIVGHAVHGEAREALQLFSEMNFIVSPNDVTF 281
Query: 57 ----WNCMIAGYVAVG--DLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNR 110
C AG V G + + NE + P + CM+D R G++ A +F
Sbjct: 282 IGVLMACSHAGLVEEGKRNFRSMNEDYGIEPREP--HFGCMVDLFCRSGHLREAYDFIME 339
Query: 111 MPA-RNVVSWNSMLA 124
MP N V W ++L
Sbjct: 340 MPVPPNAVMWRTLLG 354
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 189/405 (46%), Gaps = 44/405 (10%)
Query: 42 ARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERM------PDR------------ 83
A LF+ M ++D+ WN +I G+ GD A E+F R+ PD
Sbjct: 454 AMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAI 513
Query: 84 --DVVSWNCMIDGCVRVG-----NVPLALE---------------FFNRMPARNVVSWNS 121
D+ C+ G + G +V +AL F ++ VSWN
Sbjct: 514 MDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNV 573
Query: 122 MLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSN 181
M+A ++ E + F M + PN T V++L A ++L L M H+ I
Sbjct: 574 MIAGYLHNGYSNEAISTFRRM-KLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRM 632
Query: 182 NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELF 241
L+ L+ MY KCG + + F EM ++ +SWN+M+ Y +HG GE A+ LF
Sbjct: 633 GFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALF 692
Query: 242 LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLAR 301
M++ + + +++ VLSAC H+G++ EGW F M +++EP +EHY C+VDLL
Sbjct: 693 SVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGC 752
Query: 302 AGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIM 361
AGL L+ ++ + C H + LGE+ L++LEP + +++
Sbjct: 753 AGLFDEVLSLLNKMTTE-PDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVV 811
Query: 362 LSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVV--HLEDFESK 404
LS+ YA GRW+D R R I GL+K S V H + E K
Sbjct: 812 LSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWVGAHKNEMEKK 856
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 130/276 (47%), Gaps = 40/276 (14%)
Query: 27 NSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVG------------------ 68
NS+ID + K G+ +A+++FD M VRD +W M+AGYV G
Sbjct: 237 NSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVK 296
Query: 69 -----------------DLEAANELFERMPD----RDVVSWNCMIDGCVRVGNVPLALEF 107
DLE E++ D+V ++ + G + A E
Sbjct: 297 MNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKAREL 356
Query: 108 FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK 167
F + R++V+W++ L+ V E L +F M G P++A L +++ C +
Sbjct: 357 FLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLK-PDKAILSILVSGCTEISN 415
Query: 168 LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMG 227
+ +G +H + +++ D+ + T L++MY++ A +F+ M ++++V WN++I G
Sbjct: 416 IGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLING 475
Query: 228 YGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSAC 263
+ +G+ ALE+F ++ G P+ T V + SAC
Sbjct: 476 FTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSAC 511
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAANEL 76
+ L D+ S+ID K G AR +FD+MPV+D WN MI+G + A E+
Sbjct: 128 NGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEM 187
Query: 77 FERMP----DRDVVSW---------------------------------NCMIDGCVRVG 99
F RM + D VS N +ID + G
Sbjct: 188 FWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGVVSNSLIDMYCKCG 247
Query: 100 NVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVL 159
+V A F+RM R+ VSW +M+A +V+ ++E L++ +M G N+ +V+ L
Sbjct: 248 DVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKM-RRGNVKMNKVAVVNAL 306
Query: 160 TACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVV 219
A + L G ++++ + D++++T ++ MY KCG + AR++F + R++V
Sbjct: 307 LVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLV 366
Query: 220 SWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACT 264
+W++ + G + L +F M+ +G KP+ A ++S CT
Sbjct: 367 AWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCT 411
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Query: 91 MIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP 150
+I+ C + + F ++ +++ +NS + + + F + + ++ +++ G P
Sbjct: 39 LINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLK-P 97
Query: 151 NEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVF 210
++ T VL AC G+ ++ I N ++ DV + T L+ M+ K G +D AR+VF
Sbjct: 98 DKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVF 157
Query: 211 DEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMV 269
D+MPV++ V WN+MI G N +ALE+F M+ +G + + + + + A + G V
Sbjct: 158 DKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDV 216
>Medtr3g408390.1 | PPR containing plant-like protein | HC |
chr3:1481664-1484476 | 20130731
Length = 392
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 158/292 (54%), Gaps = 17/292 (5%)
Query: 111 MPARNVVSWNSMLALHVRAKSFWE-----CLKMFDEMMESG--EAVPNEATLVSVLTACA 163
MP RNVV+WN+M+ + K E L +F EM+ G E PN+ T+V +L+A +
Sbjct: 1 MPDRNVVTWNAMITGYCSLKDGNEKNAVNGLCLFKEMLMVGGSEVRPNDTTVVCLLSAAS 60
Query: 164 HLGKLSVGMWVHSFIKSNNIKV--DVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSW 221
LG + +G+ +H F KV DV + T L+ MY KCG ++ A VF M RNV++W
Sbjct: 61 QLGMVEIGVCLHGFAVKVLCKVEDDVFIGTGLVDMYSKCGCLESALSVFRRMKWRNVLTW 120
Query: 222 NSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRR 281
+M G +HG GE+AL++ EM G KPN+ TF +LSAC HAG+V EG F M
Sbjct: 121 TAMTTGLAIHGRGEEALKILYEMGSDGVKPNETTFTSLLSACCHAGLVEEGLQLFRDMEG 180
Query: 282 VYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELG 341
+ + P ++HYGC+VDLL R G + + + I + + C H D +G
Sbjct: 181 KFGVVPWIQHYGCVVDLLGRNGNLNEAYDFIMEMPIS-PDTLIWRSLLSACRIHGDVVMG 239
Query: 342 EIVAKRLIELEPMDIGP-------YIMLSNTYAAQGRWDDVERVRVMIREKG 386
E V + L++ + Y+ LSN YA+ GRWD VE VR ++ KG
Sbjct: 240 EKVGRFLLKFKEKSSEELAHKSEDYVALSNVYASAGRWDVVEVVRKKMKVKG 291
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 61/256 (23%)
Query: 49 MPVRDVWNWNCMIAGYVAVGDLEAANE-----LFERM----------------------- 80
MP R+V WN MI GY ++ D N LF+ M
Sbjct: 1 MPDRNVVTWNAMITGYCSLKDGNEKNAVNGLCLFKEMLMVGGSEVRPNDTTVVCLLSAAS 60
Query: 81 ---------------------PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSW 119
+ DV ++D + G + AL F RM RNV++W
Sbjct: 61 QLGMVEIGVCLHGFAVKVLCKVEDDVFIGTGLVDMYSKCGCLESALSVFRRMKWRNVLTW 120
Query: 120 NSM---LALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
+M LA+H R + E LK+ EM G PNE T S+L+AC H G + G+ +
Sbjct: 121 TAMTTGLAIHGRGE---EALKILYEMGSDG-VKPNETTFTSLLSACCHAGLVEEGLQLFR 176
Query: 177 FIKSNNIKVD-VLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGN- 233
++ V + C++ + + G ++ A D EMP+ + + W S++ +HG+
Sbjct: 177 DMEGKFGVVPWIQHYGCVVDLLGRNGNLNEAYDFIMEMPISPDTLIWRSLLSACRIHGDV 236
Query: 234 --GEKALELFLEMEKK 247
GEK L+ ++K
Sbjct: 237 VMGEKVGRFLLKFKEK 252
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 206/437 (47%), Gaps = 42/437 (9%)
Query: 17 SSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVG---DLEAA 73
SL +++ ++ + K G ARKLFD+MP R++ +WN MIA Y D
Sbjct: 29 QSLLPNVILETDLLLAYTKLGLISHARKLFDKMPQRNMHSWNIMIASYTHNSMYFDALTV 88
Query: 74 NELFER---MPD---------------------------------RDVVSWNCMIDGCVR 97
E F+R +PD VV N +++ V+
Sbjct: 89 FEAFKRCGVLPDCYTLPPLFKISIRIDECCLGWMCHGLVVKLGYEEIVVVNNSVLEFYVK 148
Query: 98 VGNVPLALEFF-NRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVP-NEATL 155
G + AL F N R+ +WN M++ +A + E + F EM++ + + TL
Sbjct: 149 CGTMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDHMTL 208
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMP 214
S+L+AC G L VH FI N D + L+ Y KCG++ + ++F +
Sbjct: 209 PSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFKTVC 268
Query: 215 VRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWW 274
N+V+W +MI YG+HG G++++ LF +M +G +PN T +L++C+H G++ +G
Sbjct: 269 YVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQGKK 328
Query: 275 YFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTT 334
F M Y +EP EHY C+VDL +R G ++ + +L++ + C
Sbjct: 329 IFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSMWGALLAGCVM 388
Query: 335 HMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
H + ++GE+ A L +LEP + Y+ L Y ++G V +R +R+ GL K S
Sbjct: 389 HQNVKIGEVAAHHLFQLEPNNTSNYVALWGIYQSRGMVLGVSTIRGKMRDLGLVKTPGCS 448
Query: 395 VVHLEDFESKYFVKNYS 411
+++ K++ + S
Sbjct: 449 WINIAGRAHKFYQGDLS 465
>Medtr7g111120.1 | PPR containing plant-like protein | HC |
chr7:45588277-45586755 | 20130731
Length = 417
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 188/336 (55%), Gaps = 7/336 (2%)
Query: 58 NCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVV 117
C++ YV + L+A LF+ MP RD V+WN MI G R+ +V A + F+ MP R++V
Sbjct: 73 TCLLNSYVFLSFLDACI-LFDEMPQRDTVTWNTMILGYSRLEDVKKARQLFDEMPHRDIV 131
Query: 118 SWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGK--LSVGMWVH 175
SW +M++ ++ S+ + L +F M+ P++ VL+ CAH+ + L G VH
Sbjct: 132 SWCNMISAYLNVGSYMQSLYLFRRMLFVEGIKPDQVIACLVLSGCAHVERHGLLGGKSVH 191
Query: 176 SFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGE 235
+I N +++V + L+ MY K G + A V + M R+V SW MI G G +
Sbjct: 192 GYIVKNGWELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVTSWTLMICGAVRCGFNK 251
Query: 236 KALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
+AL +F +M+ G KPN+ TF VLSAC H G V +G YF ++ ++P+V+HY C+
Sbjct: 252 EALVVFEKMQMDGVKPNELTFTGVLSACAHGGFVEDGRRYFKMIEEC-GLKPRVQHYACL 310
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIEL-EPM 354
V L+ ++G+++ + E+IK + V+ C H E+ E V ++++ + +P
Sbjct: 311 VYLIGKSGMLEEAYEIIKMMKVE-PDVVVLGSFLSACKEHKQFEIAEGVIEQVLRMAKPE 369
Query: 355 DI-GPYIMLSNTYAAQGRWDDVERVRVMIREKGLQK 389
+ G Y ++++ Y + ++ ER++ +I ++ L++
Sbjct: 370 NYRGLYSLIADLYVIGDKSEEAERMKKLIIKEHLRQ 405
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 125/296 (42%), Gaps = 51/296 (17%)
Query: 4 VFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAG 63
VF DA +LFD D V++N+MI G+ + + AR+LFDEMP RD+ +W MI+
Sbjct: 80 VFLSFLDACILFDEMPQRDTVTWNTMILGYSRLEDVKKARQLFDEMPHRDIVSWCNMISA 139
Query: 64 YVAVGDLEAANELFERM-------PDRDVVSWNCMI-DGCVRVG---------------- 99
Y+ VG + LF RM PD+ + C++ GC V
Sbjct: 140 YLNVGSYMQSLYLFRRMLFVEGIKPDQVIA---CLVLSGCAHVERHGLLGGKSVHGYIVK 196
Query: 100 -----NVPLALEFFNR----------------MPARNVVSWNSMLALHVRAKSFWECLKM 138
NV + N M R+V SW M+ VR E L +
Sbjct: 197 NGWELNVEIGAALVNMYAKGGVLRNAAMVLELMDERDVTSWTLMICGAVRCGFNKEALVV 256
Query: 139 FDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYV 198
F++M G PNE T VL+ACAH G + G I+ +K V CL+ +
Sbjct: 257 FEKMQMDG-VKPNELTFTGVLSACAHGGFVEDGRRYFKMIEECGLKPRVQHYACLVYLIG 315
Query: 199 KCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPND 253
K G ++ A ++ M V +VV S + H E A E +E + KP +
Sbjct: 316 KSGMLEEAYEIIKMMKVEPDVVVLGSFLSACKEHKQFEIA-EGVIEQVLRMAKPEN 370
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 212/459 (46%), Gaps = 44/459 (9%)
Query: 13 LLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEA 72
L+F ++ N++I + K RK+FDEM R+V W +I+G E
Sbjct: 174 LVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYED 233
Query: 73 ANELFERMPDRDVVSWNCMI-------------------------------DGCV----- 96
+ LF +M VS N + D C+
Sbjct: 234 SLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALM 293
Query: 97 ----RVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNE 152
+ G++ A + F + VS +L + E +++F +M+ G V +
Sbjct: 294 DLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEV--D 351
Query: 153 ATLVSVLTACAHLGK-LSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFD 211
A +VS + +G L++G +HS I N + + L+ MY KCG + + VF
Sbjct: 352 ANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFY 411
Query: 212 EMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
+M +N VSWNS+I + HG+G KAL+ + EM +G P D TF+ +L AC+HAG+V +
Sbjct: 412 QMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEK 471
Query: 272 GWWYFDLMRRVYNIEPKVEHYGCIVDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXX 331
G + M + I P+ EHY C+VD+L RAG + +++ I+ + +
Sbjct: 472 GMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGLP-EHGGVLVWQALLGA 530
Query: 332 CTTHMDSELGEIVAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEA 391
C+ H DSE+G+ A RL P PY++++N Y+++G W + ++E G+ KE
Sbjct: 531 CSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWKERASSIKRMKEMGVAKEV 590
Query: 392 ASSVVHLEDFESKYFVKNYSVHRKRIMYSMLSELGAHIK 430
S + +E + + V + +++ +LS L H+K
Sbjct: 591 GISWIEIEKKVNSFVVGDKLHPEADVIFWVLSGLLKHLK 629
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 131/279 (46%), Gaps = 45/279 (16%)
Query: 15 FDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGDLEAAN 74
FD S L +NS++ + K GE A +FD MPVRD +WN MI+G++ GD + +
Sbjct: 69 FDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSF 128
Query: 75 ELFERMPDR-------DVVSWNCMIDGC---------------------------VRVGN 100
+ F++M + D + M+ GC + VGN
Sbjct: 129 KFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGN 188
Query: 101 VPLALEF-----------FNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAV 149
+ F F+ M RNVV+W ++++ + + + + L++F +M G
Sbjct: 189 ALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVS 248
Query: 150 PNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDV 209
PN T +S L AC+ L L G +H + ++ D+ + + L+ +Y KCG++D A +
Sbjct: 249 PNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQI 308
Query: 210 FDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
F+ + VS +++ + +G E+A+++F +M G
Sbjct: 309 FESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALG 347
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 88 WNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGE 147
WN ++ + G A F+ MP R+ VSWN+M++ +R F K F +M ES
Sbjct: 80 WNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNR 139
Query: 148 AVP--NEATLVSVLTACAHLG---KLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
++ATL ++L+ C L SV +H + + ++ + L+T Y KC
Sbjct: 140 VCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCEC 199
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP-KPNDATFVCVLS 261
R VFDEM RNVV+W ++I G + E +L LF +M G PN T++ L
Sbjct: 200 FSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLM 259
Query: 262 ACTHAGMVMEG 272
AC+ ++ +G
Sbjct: 260 ACSGLQVLRDG 270
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 147 EAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVD--------VLLSTCLLTMYV 198
+++ N A L S+LT C L++G +H+ I D + + LL+MY
Sbjct: 29 KSLLNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYS 88
Query: 199 KCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGP---KPNDAT 255
KCG A +VFD MPVR+ VSWN+MI G+ +G+ + + + F +M + + + AT
Sbjct: 89 KCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKAT 148
Query: 256 FVCVLSAC 263
+LS C
Sbjct: 149 LTTMLSGC 156
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 197/426 (46%), Gaps = 41/426 (9%)
Query: 24 VSYNSMIDGHVKNGETGAARKLFDEMPVR----DVWNWN---------------CMIAGY 64
+++N +I H + GE A LF EM D W ++ CM+ +
Sbjct: 170 IAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMSACTESMESLHGCMMHCF 229
Query: 65 VAVGDLEAANEL--------------------FERMPDRDVVSWNCMIDGCVRVGNVPLA 104
V A E+ F + VSWN +ID ++VG+ A
Sbjct: 230 VIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKA 289
Query: 105 LEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAH 164
L F + P +N+VSW SM+ + R + L +F +M + + ++ +VL ACA
Sbjct: 290 LLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQL-DDLVAGAVLHACAS 348
Query: 165 LGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSM 224
L L G VHS I + + + L+ MY KCG ++ ++ + +++VSWNSM
Sbjct: 349 LAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDKDLVSWNSM 408
Query: 225 IMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYN 284
+ +GL+G G +A+ +F EM G +P++ TF +L C+H G++ EG+ +F M Y
Sbjct: 409 LFAFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLIDEGFAFFQSMSLEYG 468
Query: 285 IEPKVEHYGCIVDLLARAGLVKNSEELI-KYVSVKXXXXXXXXXXXXXCTTHMDSELGEI 343
+ ++H C+VD+L R G V ++ L KY C H D G
Sbjct: 469 LVQGMDHVACMVDMLGRGGYVAEAQSLARKYSKTSRDKTNSCEVLLGACHAHGDLGTGSS 528
Query: 344 VAKRLIELEPMDIGPYIMLSNTYAAQGRWDDVERVRVMIREKGLQKEAASSVVHLEDFES 403
V + + LEP Y++LSN Y A G+W + E VR + ++G++K S + + + +
Sbjct: 529 VGEYVKNLEPKKEVGYVLLSNMYCASGKWKEAEMVRKEMMDQGVKKVPGCSWIEIRNVVT 588
Query: 404 KYFVKN 409
+ N
Sbjct: 589 AFVSGN 594
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 134/338 (39%), Gaps = 72/338 (21%)
Query: 6 GRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM-----PVRDVWNWNCM 60
GR+ AR LFD D V++N+M+ + + G LFD M D ++++
Sbjct: 19 GRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSYSAA 78
Query: 61 IAGYVAVGDLEAANEL-----------------------------------FERMPDRDV 85
I D+ +L F+ M +
Sbjct: 79 INSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNE 138
Query: 86 VSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMES 145
V+W ++ +A E F MP + ++WN ++A H R CL +F EM E+
Sbjct: 139 VTWCSLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCEN 198
Query: 146 GEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMY-------- 197
P++ T ++++AC + G +H F+ + + ++ +++ Y
Sbjct: 199 LYQ-PDQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGD 257
Query: 198 -----------------------VKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNG 234
+K G A F + P +N+VSW SMI+GY +GNG
Sbjct: 258 AVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNG 317
Query: 235 EKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEG 272
+ AL LFL+M++ + +D VL AC +++ G
Sbjct: 318 DLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHG 355
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 43/251 (17%)
Query: 96 VRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATL 155
R G + A + F+ MP R+ V+WN+ML + R + + +FD M ++ P+ +
Sbjct: 16 ARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSY 75
Query: 156 VSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPV 215
+ + +CA + G +HS + + + + ++ L+ MY KC + AR VFDEM
Sbjct: 76 SAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNY 135
Query: 216 RNVVSWNSMIMGY----------------------------GLH---GNGEKALELFLEM 244
N V+W S++ Y H G E L LF EM
Sbjct: 136 SNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEM 195
Query: 245 EKKGPKPNDATFVCVLSACT-----------HAGMVMEGW-WYFDLMRRVYNIEPKVEHY 292
+ +P+ TF ++SACT H ++ GW ++ + + K+E +
Sbjct: 196 CENLYQPDQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECH 255
Query: 293 GCIVDLLARAG 303
G V + G
Sbjct: 256 GDAVKVFNSGG 266
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 63/251 (25%)
Query: 10 DARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAVGD 69
DA +F+S + VS+N++ID H+K G+T A F + P +++ +W MI GY G+
Sbjct: 257 DAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGN 316
Query: 70 LEAANELFERMP---------------------------------------DRDVVSWNC 90
+ A LF M D+ + N
Sbjct: 317 GDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNS 376
Query: 91 MIDGCVRVGNV---PLALEFFNRMPARNVVSWNSML---ALHVRAKSFWECLKMFDEMME 144
+I+ + G++ LAL N +++VSWNSML L+ R E + MF EM+
Sbjct: 377 LINMYAKCGDIEGSKLALRGIND---KDLVSWNSMLFAFGLNGRGN---EAICMFREMVA 430
Query: 145 SGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLS----TCLLTMYVKC 200
SG P+E T +L C+HLG + G +F +S +++ ++ C++ M +
Sbjct: 431 SG-VRPDEVTFTGLLMTCSHLGLIDEGF---AFFQSMSLEYGLVQGMDHVACMVDMLGRG 486
Query: 201 G----AMDLAR 207
G A LAR
Sbjct: 487 GYVAEAQSLAR 497
>Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:26047948-26049264 | 20130731
Length = 438
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 180/332 (54%), Gaps = 8/332 (2%)
Query: 69 DLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPAR-NVVSWNSMLA--- 124
L A++LF+ P R+ V WN +I RV N+ A+ FN M N ++N ++A
Sbjct: 102 SLNHAHQLFDETPHRNDVIWNSIIALYSRVQNITTAVNLFNEMDVPPNESTFNPIIAALS 161
Query: 125 LHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIK 184
L + + ++ + F M + P TL++++ A + L++ +H + N+I
Sbjct: 162 LSNQNNASFKAIS-FYRRMTGLKLKPGLITLLALVRASVSIAALNLIKEIHGYAMRNDID 220
Query: 185 VDVLLSTCLLTMYVKCGAMDLARDVFDEMPV--RNVVSWNSMIMGYGLHGNGEKALELFL 242
LS+ L+ Y +CG + +R VF M ++VV W+++I LHG ++ALE F
Sbjct: 221 SHPQLSSGLIEAYGRCGCLMDSRTVFKNMRGCDKDVVVWSNLISACALHGEAKEALEFFQ 280
Query: 243 EMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARA 302
EME G KP+ TF+ VL AC+HAG+ E +F M R Y +EP EHY C+VD+L+RA
Sbjct: 281 EMEVSGVKPDGITFLAVLKACSHAGLDDEALCFFMKMHRDYGVEPNSEHYSCLVDVLSRA 340
Query: 303 GLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMDIGPYIML 362
G + + E+IK + VK CT + + L EI K L E+EP + Y++L
Sbjct: 341 GRLYEAYEVIKGMPVK-VTAKAWGALLGACTNYGELGLAEIAGKALAEVEPDNAANYVLL 399
Query: 363 SNTYAAQGRWDDVERVRVMIREKGLQKEAASS 394
+ YA+ GR ++ +R+ ++EKG++ + +S
Sbjct: 400 AKIYASVGRREEADRMIREMKEKGVKTTSGTS 431
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 8/211 (3%)
Query: 107 FFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLG 166
FF + ++S+ + HV E L +F M S + VL +C L
Sbjct: 6 FFYSPNHQRLLSFTKQITTHVNQSRHREALSIFHHMHSSLFMFLDPHVFTLVLKSCTSLH 65
Query: 167 KLSVGMWVHS-FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMI 225
+ +HS IKS+ + + LS+ LL Y C +++ A +FDE P RN V WNS+I
Sbjct: 66 LPYLATSIHSHLIKSSFLTNNPFLSSSLLNFYGHCVSLNHAHQLFDETPHRNDVIWNSII 125
Query: 226 MGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNI 285
Y N A+ LF EM+ PN++TF +++A + + + RR+ +
Sbjct: 126 ALYSRVQNITTAVNLFNEMDV---PPNESTFNPIIAALSLSNQNNASFKAISFYRRMTGL 182
Query: 286 EPKVEHYGCIVDL-LARAGLVKNSEELIKYV 315
+ K G I L L RA + + LIK +
Sbjct: 183 KLKP---GLITLLALVRASVSIAALNLIKEI 210
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 16/207 (7%)
Query: 60 MIAGYVAVGDLEAANELFERMP--DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV- 116
+I Y G L + +F+ M D+DVV W+ +I C G ALEFF M V
Sbjct: 229 LIEAYGRCGCLMDSRTVFKNMRGCDKDVVVWSNLISACALHGEAKEALEFFQEMEVSGVK 288
Query: 117 ---VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMW 173
+++ ++L A E L F +M PN ++ + G+L
Sbjct: 289 PDGITFLAVLKACSHAGLDDEALCFFMKMHRDYGVEPNSEHYSCLVDVLSRAGRLYEAYE 348
Query: 174 VHSFIKSNNIKVDV-----LLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGY 228
V IK +KV LL C T Y + G ++A E+ N ++ + Y
Sbjct: 349 V---IKGMPVKVTAKAWGALLGAC--TNYGELGLAEIAGKALAEVEPDNAANYVLLAKIY 403
Query: 229 GLHGNGEKALELFLEMEKKGPKPNDAT 255
G E+A + EM++KG K T
Sbjct: 404 ASVGRREEADRMIREMKEKGVKTTSGT 430
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 193/390 (49%), Gaps = 16/390 (4%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAV 67
+ DA +F + D VS+ S+I G N + A LF EM + NC V +
Sbjct: 97 IVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQI-RPNCFTLTSV-I 154
Query: 68 GDLEAANELFERMP-----------DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
N + E P D + ++D G + A+ FN ++
Sbjct: 155 NACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDT 214
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
V +N+M++ + + + LK+F EM E + P + TL S+L+AC+ L L G VHS
Sbjct: 215 VIYNTMISGYCQNLYSEDALKLFVEMREKNMS-PTDHTLSSILSACSSLAMLLQGRQVHS 273
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
+ + +V +++ L+ MY K G +D A+ V D+ +N V W SMIMGY G G +
Sbjct: 274 LVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLE 333
Query: 237 ALELF-LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
ALELF + KK P+ F VL+AC HAG + +G YF+ M Y + P ++ Y C+
Sbjct: 334 ALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSPDIDIYACL 393
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
+DL AR G ++ + +L++ + C + D ELG A +LI++EP +
Sbjct: 394 IDLYARNGNLRKARDLMEEMPYD-PNCIIWSSFLSACKIYGDVELGREAAIQLIKMEPCN 452
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREK 385
PY+ L++ Y +G W++ VR +++++
Sbjct: 453 AAPYLTLAHIYTTKGLWNEASEVRSLMQQR 482
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 11/296 (3%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ +G++ DA LLF+ + D V YN+MI G+ +N + A KLF EM +++ + +
Sbjct: 193 YANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTL 252
Query: 62 AGYVAVGDLEA-------ANELFERM-PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+ ++ A + L +M +R+V + +ID + G++ A ++
Sbjct: 253 SSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSK 312
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG-M 172
+N V W SM+ + + E L++FD ++ E +P+ +VLTAC H G + G
Sbjct: 313 KNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEE 372
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLH 231
+ + I + + D+ + CL+ +Y + G + ARD+ +EMP N + W+S + ++
Sbjct: 373 YFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIY 432
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
G+ E E +++ K P N A ++ + T G+ E LM++ +P
Sbjct: 433 GDVELGREAAIQLIKMEP-CNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRKP 487
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
+ +A +FF + +NV + H ++ S + L+ M E P + L + L+
Sbjct: 2 IRVAWKFFGK-ACKNVY-----IRKHSKSASTCQALESLSRMNGLIEK-PTKYVLCNALS 54
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
+CA +G+ +H+++ + + ++ L + L+ Y KC A+ A +F M + VS
Sbjct: 55 SCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVS 114
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
W S+I G+ + G AL LF EM +PN T V++AC V+E
Sbjct: 115 WTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLE 165
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 193/390 (49%), Gaps = 16/390 (4%)
Query: 8 VSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMIAGYVAV 67
+ DA +F + D VS+ S+I G N + A LF EM + NC V +
Sbjct: 97 IVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQI-RPNCFTLTSV-I 154
Query: 68 GDLEAANELFERMP-----------DRDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNV 116
N + E P D + ++D G + A+ FN ++
Sbjct: 155 NACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDT 214
Query: 117 VSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGMWVHS 176
V +N+M++ + + + LK+F EM E + P + TL S+L+AC+ L L G VHS
Sbjct: 215 VIYNTMISGYCQNLYSEDALKLFVEMREKNMS-PTDHTLSSILSACSSLAMLLQGRQVHS 273
Query: 177 FIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEK 236
+ + +V +++ L+ MY K G +D A+ V D+ +N V W SMIMGY G G +
Sbjct: 274 LVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLE 333
Query: 237 ALELF-LEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCI 295
ALELF + KK P+ F VL+AC HAG + +G YF+ M Y + P ++ Y C+
Sbjct: 334 ALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSPDIDIYACL 393
Query: 296 VDLLARAGLVKNSEELIKYVSVKXXXXXXXXXXXXXCTTHMDSELGEIVAKRLIELEPMD 355
+DL AR G ++ + +L++ + C + D ELG A +LI++EP +
Sbjct: 394 IDLYARNGNLRKARDLMEEMPYD-PNCIIWSSFLSACKIYGDVELGREAAIQLIKMEPCN 452
Query: 356 IGPYIMLSNTYAAQGRWDDVERVRVMIREK 385
PY+ L++ Y +G W++ VR +++++
Sbjct: 453 AAPYLTLAHIYTTKGLWNEASEVRSLMQQR 482
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 146/296 (49%), Gaps = 11/296 (3%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDVWNWNCMI 61
Y+ +G++ DA LLF+ + D V YN+MI G+ +N + A KLF EM +++ + +
Sbjct: 193 YANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTL 252
Query: 62 AGYVAVGDLEA-------ANELFERM-PDRDVVSWNCMIDGCVRVGNVPLALEFFNRMPA 113
+ ++ A + L +M +R+V + +ID + G++ A ++
Sbjct: 253 SSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSK 312
Query: 114 RNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVG-M 172
+N V W SM+ + + E L++FD ++ E +P+ +VLTAC H G + G
Sbjct: 313 KNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEE 372
Query: 173 WVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR-NVVSWNSMIMGYGLH 231
+ + I + + D+ + CL+ +Y + G + ARD+ +EMP N + W+S + ++
Sbjct: 373 YFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIY 432
Query: 232 GNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVMEGWWYFDLMRRVYNIEP 287
G+ E E +++ K P N A ++ + T G+ E LM++ +P
Sbjct: 433 GDVELGREAAIQLIKMEP-CNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRKP 487
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 101 VPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLT 160
+ +A +FF + +NV + H ++ S + L+ M E P + L + L+
Sbjct: 2 IRVAWKFFGK-ACKNVY-----IRKHSKSASTCQALESLSRMNGLIEK-PTKYVLCNALS 54
Query: 161 ACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVRNVVS 220
+CA +G+ +H+++ + + ++ L + L+ Y KC A+ A +F M + VS
Sbjct: 55 SCAKTLNWHLGIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVS 114
Query: 221 WNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSACTHAGMVME 271
W S+I G+ + G AL LF EM +PN T V++AC V+E
Sbjct: 115 WTSLIAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLE 165
>Medtr3g088825.1 | PPR containing plant-like protein | HC |
chr3:40650693-40652499 | 20130731
Length = 555
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 166/341 (48%), Gaps = 51/341 (14%)
Query: 2 YSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEM------------ 49
Y+ GR+SDAR +FD+ + V +NS+I G+V NGE A LF++M
Sbjct: 207 YANAGRMSDARRVFDNKVDPCSVLWNSIISGYVSNGEEMEALDLFNQMRRSGVRGEFPAV 266
Query: 50 ---------------------------PVRDVWNWNCMIAGYVAVGDLEAANELFERMPD 82
D+ + ++ Y A ELF+ +
Sbjct: 267 ANILSAASSLLNFELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHSHEACELFDELKV 326
Query: 83 RDVVSWNCMIDGCVRVGNVPLALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEM 142
D + N MI G + A F MP + ++SWNS+LAL ++ + M D
Sbjct: 327 YDAILLNTMITVYCNCGRIEDAKGIFQTMPNKTLISWNSILALDTFSR-----MNMLDVK 381
Query: 143 MESGEAVPNEATLVSVLTACAHLGKLSVGMWVHSFIKSNNIKVDVLLSTCLLTMYVKCGA 202
M+ + + SV++ACA L +G V + ++ D ++ T L+ Y KCG
Sbjct: 382 MD-------KFSFASVISACAIKSSLELGEQVFGKAITLGLESDQIIYTSLVDFYCKCGI 434
Query: 203 MDLARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKGPKPNDATFVCVLSA 262
+++ R VFD M + VSWN+M+MGY +G G +AL LF EME G +P+ TF VLSA
Sbjct: 435 VEMGRKVFDGMIRTDEVSWNTMLMGYATNGYGIEALTLFNEMEYSGVRPSAITFNGVLSA 494
Query: 263 CTHAGMVMEGWWYFDLMRRVYNIEPKVEHYGCIVDLLARAG 303
C H G+V EG F M+ Y+I P +EHY C+VDL ARAG
Sbjct: 495 CDHCGLVEEGRNLFRTMKHEYDINPGIEHYSCMVDLFARAG 535
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 121/256 (47%), Gaps = 35/256 (13%)
Query: 44 KLFDEMPVRDVWNWNCMIAGYVAVGDLEAANELFERMPDRDVVSWNCMIDGCVRVGNVPL 103
+LFDEMP + ++WN +I ++ + + + ELF MP + SWN ++ + G++
Sbjct: 19 QLFDEMPQPNPFSWNTLIEAHINLSHRKKSLELFHAMPHKSHYSWNQLVSTFSKSGDLQQ 78
Query: 104 ALEFFNRMPARNVVSWNSMLALHVRAKSFWECLKMFDEMM-ESGEAVPNEA-TLVSVLTA 161
A FN MP +N + WNSM+ + R + + +F EM+ + E + +A L +V A
Sbjct: 79 AHNLFNAMPMKNPLVWNSMIHGYSRHGYPRKAILLFKEMIFDPLETMHRDAFVLSTVFGA 138
Query: 162 CAHLGKLSVGMWVHS--FIKSNNIKVDVLLSTCLLTMYVKCGAMDL-------------- 205
CA L L G VH+ FI K D +L + ++ +Y KCG +D+
Sbjct: 139 CADLFVLDCGKQVHARVFIDGFEFKHDKVLCSSIVNLYGKCGDLDIAVWVVGFVMDVDDF 198
Query: 206 -----------------ARDVFDEMPVRNVVSWNSMIMGYGLHGNGEKALELFLEMEKKG 248
AR VFD V WNS+I GY +G +AL+LF +M + G
Sbjct: 199 SLSALVSGYANAGRMSDARRVFDNKVDPCSVLWNSIISGYVSNGEEMEALDLFNQMRRSG 258
Query: 249 PKPNDATFVCVLSACT 264
+ +LSA +
Sbjct: 259 VRGEFPAVANILSAAS 274
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 21/225 (9%)
Query: 1 MYSVFGRVSDARLLFDSSLTLDLVSYNSMIDGHVKNGETGAARKLFDEMPVRDV----WN 56
+Y GR+ DA+ +F + L+S+NS++ A F M + DV ++
Sbjct: 338 VYCNCGRIEDAKGIFQTMPNKTLISWNSIL-----------ALDTFSRMNMLDVKMDKFS 386
Query: 57 WNCMIAGYVAVGDLEAANELFERMP----DRDVVSWNCMIDGCVRVGNVPLALEFFNRMP 112
+ +I+ LE ++F + + D + + ++D + G V + + F+ M
Sbjct: 387 FASVISACAIKSSLELGEQVFGKAITLGLESDQIIYTSLVDFYCKCGIVEMGRKVFDGMI 446
Query: 113 ARNVVSWNSMLALHVRAKSFWECLKMFDEMMESGEAVPNEATLVSVLTACAHLGKLSVGM 172
+ VSWN+ML + E L +F+EM SG P+ T VL+AC H G + G
Sbjct: 447 RTDEVSWNTMLMGYATNGYGIEALTLFNEMEYSG-VRPSAITFNGVLSACDHCGLVEEGR 505
Query: 173 WVHSFIKSN-NIKVDVLLSTCLLTMYVKCGAMDLARDVFDEMPVR 216
+ +K +I + +C++ ++ + G A V +EMP +
Sbjct: 506 NLFRTMKHEYDINPGIEHYSCMVDLFARAGCFGEAMYVIEEMPFQ 550