Miyakogusa Predicted Gene

Lj0g3v0206249.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206249.1 Non Characterized Hit- tr|I1LA99|I1LA99_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19760
PE,89.6,0,seg,NULL; DUF288,Protein of unknown function DUF288;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.13188.1
         (622 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0121s0010.1 | transmembrane protein, putative | HC | scaffo...   785   0.0  

>Medtr0121s0010.1 | transmembrane protein, putative | HC |
           scaffold0121:2316-316 | 20130731
          Length = 571

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/435 (86%), Positives = 399/435 (91%)

Query: 1   MKGWQVLAIGDSKTPSDWVLKGAIYLSLEEQASLGFRVVDYLPYDSYVRKSVGYLFAIQH 60
           +KGWQV+AIGDS+TP+DW LKG I+LSL+EQA+LGFRVVDYLPYDSYVRK VGYLFAIQH
Sbjct: 137 VKGWQVVAIGDSRTPADWSLKGCIFLSLDEQANLGFRVVDYLPYDSYVRKIVGYLFAIQH 196

Query: 61  GAKKIFDADDRGEVIDGDLGKHFDVELVGQTARQEVLFQYSHDNPNRTVVNPYVHFGQRS 120
           GAKKIFDADDRGEVIDGDLGKHFDVELVG+ ARQEVL QYSHDNPNRTVVNPYVHFGQRS
Sbjct: 197 GAKKIFDADDRGEVIDGDLGKHFDVELVGEGARQEVLLQYSHDNPNRTVVNPYVHFGQRS 256

Query: 121 VWPRGLPLENVGEIGHEEFYTQVXXXXXXXXXXXSNGLPDVDSVFYFTRKSGLEAFDIRF 180
           VWPRGLPLENVGEIGHEEFYTQV           SNGLPDVDSVFYFTRKSGLE FDIRF
Sbjct: 257 VWPRGLPLENVGEIGHEEFYTQVFGGKQFIQQGISNGLPDVDSVFYFTRKSGLEPFDIRF 316

Query: 181 DEHAPKVALPQGVMVPVNSFNTLYHSPAFWALMLPVSVSTMASDVLRGYWGQRILWEXXX 240
           D+HAPKVALPQGVM+PVNSFNT+YHSPAFWALMLPVSVS MASDVLRGYWGQR+LWE   
Sbjct: 317 DKHAPKVALPQGVMMPVNSFNTMYHSPAFWALMLPVSVSRMASDVLRGYWGQRLLWEVGG 376

Query: 241 XXXXXXXTVHRYDRVEAYPFSEEKDLHVNVGRLTKFLVSWKSDKHGLFEKILDLSYAMAE 300
                  TVHRYDRVEAYPFSEEKDLHVNVGRL K+LV W+SDKH LFEKILDLSYAMAE
Sbjct: 377 YVAVYPPTVHRYDRVEAYPFSEEKDLHVNVGRLIKYLVLWRSDKHRLFEKILDLSYAMAE 436

Query: 301 EGFWTEKDVKFTAAWLQDLLAVGYQQPRLMSSELGRPRASIGHGDQREFIPQKLPSVHLG 360
           EGFWT+KDVK TAAWLQDLLAVGYQQPRLMS ELGRPRA+IG GDQREFIPQKLPSVHLG
Sbjct: 437 EGFWTDKDVKLTAAWLQDLLAVGYQQPRLMSLELGRPRANIGDGDQREFIPQKLPSVHLG 496

Query: 361 VEETGTVNYEIGNLIRWRKTFGNVVLVLYCNGPVERTALEWRLLYGRIFRTVVILSEKKD 420
           VEETGTVNYEI NLIRWRKTFGNVVL+++C+GPVERTALEWRLLYGRIFR+VVILSEKKD
Sbjct: 497 VEETGTVNYEIANLIRWRKTFGNVVLIMHCSGPVERTALEWRLLYGRIFRSVVILSEKKD 556

Query: 421 IELVVEEGHLDQAYK 435
           ++LVV+E HLDQAYK
Sbjct: 557 VDLVVQEVHLDQAYK 571