Miyakogusa Predicted Gene

Lj0g3v0206129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206129.1 tr|Q0DT18|Q0DT18_ORYSJ Os03g0275300 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os03g02753,69.86,3e-18,Ankyrin repeat,Ankyrin repeat-containing
domain; RING/U-box,NULL; seg,NULL; ZF_RING_2,Zinc finger,
R,CUFF.13226.1
         (239 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g021880.1 | E3 ubiquitin-protein ligase XBAT31-like protei...   296   1e-80
Medtr2g096760.1 | E3 ubiquitin-protein ligase XBAT31, putative |...   176   2e-44
Medtr4g063830.1 | E3 ubiquitin-protein ligase XBAT31-like protei...   170   1e-42
Medtr4g021880.2 | E3 ubiquitin-protein ligase XBAT31-like protei...   126   2e-29
Medtr1g100797.1 | E3 ubiquitin-protein ligase XBOS33, putative |...    50   2e-06
Medtr1g100797.2 | E3 ubiquitin-protein ligase XBOS33, putative |...    50   2e-06
Medtr4g129470.1 | E3 ubiquitin-protein ligase XBOS32 | HC | chr4...    49   5e-06
Medtr4g129470.2 | E3 ubiquitin-protein ligase XBOS32 | HC | chr4...    48   9e-06

>Medtr4g021880.1 | E3 ubiquitin-protein ligase XBAT31-like protein |
           HC | chr4:7349291-7344609 | 20130731
          Length = 523

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 154/239 (64%), Positives = 161/239 (67%), Gaps = 2/239 (0%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           MAARGGSVDCVRMLLAWGA+RLQLDSSGRIPFTVALK K+R              VWPSP
Sbjct: 287 MAARGGSVDCVRMLLAWGADRLQLDSSGRIPFTVALKNKHRACAALLDPSSAAPLVWPSP 346

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPTSPLHXXXXXXXXXXXXXXXXNM 120
           LKFISELNQEAK               K LLK  DIP+SPL                 NM
Sbjct: 347 LKFISELNQEAKALLENALLEANREREKALLKENDIPSSPLRSDCKYDDIVSDSEES-NM 405

Query: 121 DLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAILQLIV 180
           +LCCICFDQVCTIEVKPC HQMCAHCTLALCCLKKPDP+TGCT GPVCPFCRGAILQL V
Sbjct: 406 ELCCICFDQVCTIEVKPCDHQMCAHCTLALCCLKKPDPATGCTTGPVCPFCRGAILQLNV 465

Query: 181 PTIKNSSDTEVESNPTKPRXXXXXXXXXXXXXXXXXXAIGSFGRITGRNSGKIDDAEKQ 239
             IK  SDTEVES+PTKPR                  AIGSFGRI  RNSGK+ DAEKQ
Sbjct: 466 AKIKTDSDTEVESSPTKPRRSRKSNFSEGSSSFKSLSAIGSFGRIASRNSGKV-DAEKQ 523


>Medtr2g096760.1 | E3 ubiquitin-protein ligase XBAT31, putative | HC
           | chr2:41349211-41352816 | 20130731
          Length = 443

 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 132/238 (55%), Gaps = 8/238 (3%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           +AARGGS+DC+R LLAWGA+R+Q DSSGRIP+ VA+K ++               VWPSP
Sbjct: 201 LAARGGSLDCIRELLAWGADRIQRDSSGRIPYMVAMKHRHGSCASLLNPTSAEPLVWPSP 260

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPTSPLHXXXXXXXXXXXXXXXXNM 120
           LKFI+ELN EAK               K +LK       PL                   
Sbjct: 261 LKFINELNPEAKALLEQALMDANREREKDILKG---KFYPLPSPSQSDCVDDNISEVSES 317

Query: 121 DLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAILQL-I 179
           +LCCICF+QVCTIEV+ CGHQMCA CTLALCC  KP+P+T     PVCPFCR  I++L +
Sbjct: 318 ELCCICFEQVCTIEVQNCGHQMCAQCTLALCCYNKPNPTTTSITPPVCPFCRSNIVRLMV 377

Query: 180 VPTIKNSSDTE---VESNPTK-PRXXXXXXXXXXXXXXXXXXAIGSFGRITGRNSGKI 233
           V  I+N  +T+   V+ N +K  +                  +  SFG++ GR+SG++
Sbjct: 378 VMKIENHDETDQDNVDINCSKINKSRKLRNLNDSGSSSFKGLSSVSFGKLGGRSSGRV 435


>Medtr4g063830.1 | E3 ubiquitin-protein ligase XBAT31-like protein |
           HC | chr4:23711682-23715620 | 20130731
          Length = 447

 Score =  170 bits (430), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 125/239 (52%), Gaps = 11/239 (4%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           +AA+GGS+DC+R LLAWGA+RLQ D+SGRIP+ VALK K+               VWPS 
Sbjct: 202 LAAKGGSLDCIRELLAWGADRLQRDASGRIPYVVALKYKHGACAALLNLSSAQPLVWPSS 261

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPTSPLHXXXXXXXXXXXXXXXXNM 120
           LK ISELN EAK               K +LK +       H                  
Sbjct: 262 LKIISELNPEAKVLLEQALLDANREREKNILKGSPYSLPSPHSDRIDDNISEVS----ET 317

Query: 121 DLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPVCPFCRGAILQLIV 180
           +LCCICF+QVCTIEV+ CGHQMCA CTL LCC  K + ST     P+CPFCR AI +L+V
Sbjct: 318 ELCCICFEQVCTIEVQDCGHQMCAQCTLTLCCHNKANTSTSHPIPPICPFCRSAISKLMV 377

Query: 181 PTIKNSSDTEVES------NPTKPRXXXXXXXXXXXXXXXXXXAIGSFGRITGRNSGKI 233
             ++   D +++        P+K R                   + SFG+++GR+SG I
Sbjct: 378 IKVETHEDMDLDGADTTCFKPSKSRKFRNMNEGSSSSFKGLSN-VNSFGKMSGRSSGMI 435


>Medtr4g021880.2 | E3 ubiquitin-protein ligase XBAT31-like protein |
           HC | chr4:7349291-7344609 | 20130731
          Length = 418

 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/101 (64%), Positives = 68/101 (67%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
           MAARGGSVDCVRMLLAWGA+RLQLDSSGRIPFTVALK K+R              VWPSP
Sbjct: 287 MAARGGSVDCVRMLLAWGADRLQLDSSGRIPFTVALKNKHRACAALLDPSSAAPLVWPSP 346

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPTSPL 101
           LKFISELNQEAK               K LLK  DIP+SPL
Sbjct: 347 LKFISELNQEAKALLENALLEANREREKALLKENDIPSSPL 387


>Medtr1g100797.1 | E3 ubiquitin-protein ligase XBOS33, putative | HC
           | chr1:45735948-45731488 | 20130731
          Length = 512

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 37/183 (20%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
            AA GG++ C ++LLA GA R+ L+ +G +P  +A                     W  P
Sbjct: 227 YAACGGNLKCCQILLARGASRMALNCNGWLPLDIARMWGRH---------------WLEP 271

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPTSPLHXXXXXXXXXXXXXXXXNM 120
           L  ++ ++                        H++  + PL                 + 
Sbjct: 272 L--LAPISDAVTPS----------------FPHSNYLSLPLMSVLNIAREYGLRSSTTSS 313

Query: 121 D---LCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPV-CPFCRGAIL 176
           D    C +C ++ C++  + CGH++C  C L LC            PG + CP CR  I+
Sbjct: 314 DEIEFCAVCLERPCSVAAEGCGHELCVRCALYLCSTSNVSSEMLGPPGSIPCPLCRHGIV 373

Query: 177 QLI 179
             +
Sbjct: 374 SFV 376


>Medtr1g100797.2 | E3 ubiquitin-protein ligase XBOS33, putative | HC
           | chr1:45735948-45731488 | 20130731
          Length = 408

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 37/183 (20%)

Query: 1   MAARGGSVDCVRMLLAWGAERLQLDSSGRIPFTVALKRKNRXXXXXXXXXXXXXXVWPSP 60
            AA GG++ C ++LLA GA R+ L+ +G +P  +A                     W  P
Sbjct: 123 YAACGGNLKCCQILLARGASRMALNCNGWLPLDIARMWGRH---------------WLEP 167

Query: 61  LKFISELNQEAKTXXXXXXXXXXXXXXKVLLKHADIPTSPLHXXXXXXXXXXXXXXXXNM 120
           L  ++ ++                        H++  + PL                 + 
Sbjct: 168 L--LAPISDAVTPS----------------FPHSNYLSLPLMSVLNIAREYGLRSSTTSS 209

Query: 121 D---LCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPV-CPFCRGAIL 176
           D    C +C ++ C++  + CGH++C  C L LC            PG + CP CR  I+
Sbjct: 210 DEIEFCAVCLERPCSVAAEGCGHELCVRCALYLCSTSNVSSEMLGPPGSIPCPLCRHGIV 269

Query: 177 QLI 179
             +
Sbjct: 270 SFV 272


>Medtr4g129470.1 | E3 ubiquitin-protein ligase XBOS32 | HC |
           chr4:53926061-53932514 | 20130731
          Length = 509

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 120 MDLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPV-CPFCRGAILQL 178
           +D C +C ++ C + V+ C H+ C  C L LC        T   PG + CP CR +I+  
Sbjct: 316 LDPCAVCLERKCMVAVEGCDHEFCTQCALYLCSTNSTSTRTNGPPGSIACPLCRHSIVSF 375

Query: 179 I 179
           +
Sbjct: 376 V 376


>Medtr4g129470.2 | E3 ubiquitin-protein ligase XBOS32 | HC |
           chr4:53927634-53932514 | 20130731
          Length = 421

 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 120 MDLCCICFDQVCTIEVKPCGHQMCAHCTLALCCLKKPDPSTGCTPGPV-CPFCRGAILQL 178
           +D C +C ++ C + V+ C H+ C  C L LC        T   PG + CP CR +I+  
Sbjct: 228 LDPCAVCLERKCMVAVEGCDHEFCTQCALYLCSTNSTSTRTNGPPGSIACPLCRHSIVSF 287

Query: 179 I 179
           +
Sbjct: 288 V 288