Miyakogusa Predicted Gene

Lj0g3v0205999.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0205999.1 tr|B9GMR8|B9GMR8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_708815 PE=4 SV=1,32.32,5e-19,BRCT
domain,BRCT domain; BRCT,BRCT domain; no description,NULL; seg,NULL;
breast cancer carboxy-term,CUFF.13168.1
         (208 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g121140.1 | carboxy-terminal domain phosphatase-like prote...   215   2e-56
Medtr4g121140.2 | carboxy-terminal domain phosphatase-like prote...   215   3e-56
Medtr2g063873.1 | carboxy-terminal domain phosphatase-like prote...   179   1e-45
Medtr2g063837.1 | carboxy-terminal domain phosphatase-like prote...   175   3e-44
Medtr6g092010.1 | carboxy-terminal domain phosphatase-like prote...   174   4e-44
Medtr2g048610.1 | carboxy-terminal domain phosphatase-like prote...   173   1e-43
Medtr2g063913.1 | carboxy-terminal domain phosphatase-like prote...   170   8e-43
Medtr7g021190.1 | carboxy-terminal domain phosphatase-like prote...   107   6e-24
Medtr7g021190.2 | carboxy-terminal domain phosphatase-like prote...   107   7e-24
Medtr4g119070.1 | carboxy-terminal domain phosphatase-like prote...   106   2e-23
Medtr2g064110.1 | carboxy-terminal domain phosphatase-like prote...    52   3e-07

>Medtr4g121140.1 | carboxy-terminal domain phosphatase-like protein
           | HC | chr4:50177925-50171180 | 20130731
          Length = 447

 Score =  215 bits (548), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 98/159 (61%), Positives = 124/159 (77%)

Query: 1   MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
           +++RYH+FAS  + FGF+CKSLAE K DE ET G LA++L +LK+VH TFFDKL+ D VD
Sbjct: 283 LMERYHFFASSCRQFGFNCKSLAETKSDENETDGALAKILEMLKEVHCTFFDKLQGDLVD 342

Query: 61  RDVRKVVSSLRSEVLSGCVIVFFRTKPAPLPFLQEIAMQMGATCMEKLDPSVTHVVSTKA 120
           RDVR+V+SS+R ++LSGCVI+F R     LP L+ IA QMGATC+ +LDP+VTHVV+T A
Sbjct: 343 RDVRQVLSSVRGKILSGCVIIFSRINHGALPTLKRIAEQMGATCLMELDPTVTHVVATDA 402

Query: 121 RTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
            TEK +WA KE KFLVHP+WI  A  FWQK PE N++ K
Sbjct: 403 GTEKSRWAVKEKKFLVHPRWIEAANYFWQKQPEENFVVK 441


>Medtr4g121140.2 | carboxy-terminal domain phosphatase-like protein
           | HC | chr4:50177908-50171229 | 20130731
          Length = 444

 Score =  215 bits (547), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 98/159 (61%), Positives = 124/159 (77%)

Query: 1   MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
           +++RYH+FAS  + FGF+CKSLAE K DE ET G LA++L +LK+VH TFFDKL+ D VD
Sbjct: 280 LMERYHFFASSCRQFGFNCKSLAETKSDENETDGALAKILEMLKEVHCTFFDKLQGDLVD 339

Query: 61  RDVRKVVSSLRSEVLSGCVIVFFRTKPAPLPFLQEIAMQMGATCMEKLDPSVTHVVSTKA 120
           RDVR+V+SS+R ++LSGCVI+F R     LP L+ IA QMGATC+ +LDP+VTHVV+T A
Sbjct: 340 RDVRQVLSSVRGKILSGCVIIFSRINHGALPTLKRIAEQMGATCLMELDPTVTHVVATDA 399

Query: 121 RTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
            TEK +WA KE KFLVHP+WI  A  FWQK PE N++ K
Sbjct: 400 GTEKSRWAVKEKKFLVHPRWIEAANYFWQKQPEENFVVK 438


>Medtr2g063873.1 | carboxy-terminal domain phosphatase-like protein
           | LC | chr2:27026009-27029965 | 20130731
          Length = 445

 Score =  179 bits (455), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 81/160 (50%), Positives = 117/160 (73%)

Query: 1   MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
           +++RYH+F S  + FG  CKSLA + +DE ET G LA++L VL+Q+++ FFD+L+ D VD
Sbjct: 280 LMERYHFFNSSCQDFGLQCKSLAALNIDENETDGALAKILEVLRQINYKFFDELQGDLVD 339

Query: 61  RDVRKVVSSLRSEVLSGCVIVFFRTKPAPLPFLQEIAMQMGATCMEKLDPSVTHVVSTKA 120
           RDVR+V+SS R EVL GCVIVF       L  L+ IA ++GATC++K DP+VTHVV+T  
Sbjct: 340 RDVRQVLSSFRGEVLRGCVIVFSLNFRGDLRILRRIAERLGATCLKKHDPTVTHVVATDF 399

Query: 121 RTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICKN 160
            T++ +WA +E KFLV+ +W+  A  ++QK PE N++C+N
Sbjct: 400 VTKESRWAVEEKKFLVNRRWLEAADFYFQKQPEENFLCQN 439


>Medtr2g063837.1 | carboxy-terminal domain phosphatase-like protein
           | LC | chr2:26986203-26991064 | 20130731
          Length = 440

 Score =  175 bits (443), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 80/159 (50%), Positives = 112/159 (70%)

Query: 1   MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
           +++RYH+F S  + FG  CKSLA + +DE E  G LA++L VL+Q+++ FFD+L+ D VD
Sbjct: 280 LMERYHFFNSSCQDFGLQCKSLAALNIDENENDGALAKILEVLRQINYKFFDELQGDLVD 339

Query: 61  RDVRKVVSSLRSEVLSGCVIVFFRTKPAPLPFLQEIAMQMGATCMEKLDPSVTHVVSTKA 120
           RDVR+V+SS R EVL GCVIVF       L  L+ IA ++GATC++KLDP+VTHV+ T  
Sbjct: 340 RDVRQVLSSFRGEVLRGCVIVFSLNFHGDLRILRRIAERLGATCLKKLDPTVTHVIGTDF 399

Query: 121 RTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
            T++ +WA +E KFLV  +W+  A  F QK PE N++ K
Sbjct: 400 VTKESRWAVQEKKFLVSRRWLEAANFFLQKQPEENFLVK 438


>Medtr6g092010.1 | carboxy-terminal domain phosphatase-like protein
           | LC | chr6:34687176-34693321 | 20130731
          Length = 467

 Score =  174 bits (442), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 80/159 (50%), Positives = 112/159 (70%)

Query: 1   MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
           +++RYH+F S  + FG  CKSLA + +DE E  G LA++L VL+Q+++ FFD+L+ D VD
Sbjct: 307 LMERYHFFNSSCQDFGLQCKSLAALNIDENEIDGALAKILEVLRQINYKFFDELQGDLVD 366

Query: 61  RDVRKVVSSLRSEVLSGCVIVFFRTKPAPLPFLQEIAMQMGATCMEKLDPSVTHVVSTKA 120
           RDVR+V+SS R EVL GCVIVF       L  L+ IA ++GATC++KLDP+VTHV+ T  
Sbjct: 367 RDVRQVLSSFRGEVLRGCVIVFSLNFHGDLRILRRIAERLGATCLKKLDPTVTHVIGTDF 426

Query: 121 RTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
            T++ +WA +E KFLV  +W+  A  F QK PE N++ K
Sbjct: 427 VTKESRWAVQEKKFLVSRRWLEAANFFLQKQPEENFLVK 465


>Medtr2g048610.1 | carboxy-terminal domain phosphatase-like protein
           | LC | chr2:21431922-21435248 | 20130731
          Length = 366

 Score =  173 bits (439), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 83/160 (51%), Positives = 114/160 (71%), Gaps = 1/160 (0%)

Query: 1   MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
           +++RYH+F S  + F  +CKSLAE+ +DE ET G LAR+L VL+ ++  FFD+L+ D VD
Sbjct: 204 LMERYHFFNSSCQEFDLNCKSLAELHIDENETDGALARILKVLRHINSKFFDELQGDLVD 263

Query: 61  RDVRKVVSSLRSEVLSGCVIVFFRT-KPAPLPFLQEIAMQMGATCMEKLDPSVTHVVSTK 119
           RDVR+V+SSLR EVLSGC+IVF        L  L+ IA ++GATC+ +L P+VTH V+ +
Sbjct: 264 RDVRQVLSSLRGEVLSGCIIVFSCAFNGHDLRKLRRIAERLGATCLTELGPTVTHAVANE 323

Query: 120 ARTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
             TE+  WAEKENKFLV+ +W+  +  F QK PE NYI +
Sbjct: 324 LVTEESMWAEKENKFLVNRRWLEASNFFLQKQPEENYIVR 363


>Medtr2g063913.1 | carboxy-terminal domain phosphatase-like protein
           | LC | chr2:27079146-27073853 | 20130731
          Length = 446

 Score =  170 bits (431), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 79/160 (49%), Positives = 114/160 (71%)

Query: 1   MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
           +++RYH+F S  + FG   KSL  + +DE ET G LA++L VL+Q+++ FFD+L+ D VD
Sbjct: 281 LMERYHFFNSSCQDFGLQRKSLVALHIDENETDGALAKILEVLRQINYKFFDELQGDLVD 340

Query: 61  RDVRKVVSSLRSEVLSGCVIVFFRTKPAPLPFLQEIAMQMGATCMEKLDPSVTHVVSTKA 120
           RDVR+V+SS + EVL GCVI+F       L  L+ IA ++GATC++K DP+VTHVV+T  
Sbjct: 341 RDVRQVLSSFQGEVLRGCVIIFSLNFRGDLRKLRRIAERLGATCLKKHDPTVTHVVATDF 400

Query: 121 RTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICKN 160
            T++ +WA KE KFLV+ +W+  A  F QK PE N++C+N
Sbjct: 401 VTKESRWAVKEKKFLVNRRWLEAANFFLQKQPEENFLCQN 440


>Medtr7g021190.1 | carboxy-terminal domain phosphatase-like protein,
            putative | HC | chr7:6664027-6656896 | 20130731
          Length = 1209

 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 90/166 (54%), Gaps = 11/166 (6%)

Query: 1    MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFF--DKLEEDY 58
            +++RY YF    + FG    SL E+  DE+  +G LA  L V++++H  FF    LEE  
Sbjct: 1045 VVERYTYFPCSRRQFGLPGPSLLEIDHDERPESGTLASSLGVIERIHQNFFASQSLEE-- 1102

Query: 59   VDRDVRKVVSSLRSEVLSGCVIVFFRTKPAP-----LPFLQEIAMQMGATCMEKLDPSVT 113
               DVR +++S + ++L GC IVF R  P       L  L + A Q GA+C  ++D  VT
Sbjct: 1103 --VDVRNILASEQRKILDGCRIVFSRMFPVGDANPHLHPLWQTAEQFGASCTNQIDDQVT 1160

Query: 114  HVVSTKARTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
            HVV+    T+K  WA    KF+VHP W+  +   +++  E ++  K
Sbjct: 1161 HVVAHSPGTDKVNWAIANGKFVVHPGWVEASALLYRRANEQDFAIK 1206


>Medtr7g021190.2 | carboxy-terminal domain phosphatase-like protein,
           putative | HC | chr7:6664015-6656896 | 20130731
          Length = 958

 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 7/164 (4%)

Query: 1   MIKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFFDKLEEDYVD 60
           +++RY YF    + FG    SL E+  DE+  +G LA  L V++++H  FF     + VD
Sbjct: 794 VVERYTYFPCSRRQFGLPGPSLLEIDHDERPESGTLASSLGVIERIHQNFFASQSLEEVD 853

Query: 61  RDVRKVVSSLRSEVLSGCVIVFFRTKPAP-----LPFLQEIAMQMGATCMEKLDPSVTHV 115
             VR +++S + ++L GC IVF R  P       L  L + A Q GA+C  ++D  VTHV
Sbjct: 854 --VRNILASEQRKILDGCRIVFSRMFPVGDANPHLHPLWQTAEQFGASCTNQIDDQVTHV 911

Query: 116 VSTKARTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
           V+    T+K  WA    KF+VHP W+  +   +++  E ++  K
Sbjct: 912 VAHSPGTDKVNWAIANGKFVVHPGWVEASALLYRRANEQDFAIK 955


>Medtr4g119070.1 | carboxy-terminal domain phosphatase-like protein,
            putative | LC | chr4:49315656-49310923 | 20130731
          Length = 1074

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 13/166 (7%)

Query: 2    IKRYHYFASDLKHFGFSCKSLAEMKVDEQETTGVLARMLNVLKQVHFTFF--DKLEEDYV 59
            ++RY YF    + FG S  SL E+  DE+   G LA  L V++++H  FF    LEE   
Sbjct: 904  VERYIYFLCSRRQFGLSGPSLFEIDHDERPGAGTLASSLGVIERIHQNFFASQSLEE--- 960

Query: 60   DRDVRKVVSSLRSEVLSGCVIVF------FRTKPAPLPFLQEIAMQMGATCMEKLDPSVT 113
              DVR +++S + ++L GC IVF        T P   P L   A Q GA+C  K+DP VT
Sbjct: 961  -MDVRNILASEQRKILGGCRIVFSGVFPVGETNPHLHP-LWRTAEQFGASCTNKVDPQVT 1018

Query: 114  HVVSTKARTEKFQWAEKENKFLVHPQWIYDAYCFWQKPPETNYICK 159
            HVV+    T+K  W     KF+V+P W+  +   +++  E ++  K
Sbjct: 1019 HVVAQSPGTDKVNWGISNGKFVVYPNWVEASTLLYRRMNEQDFAVK 1064


>Medtr2g064110.1 | carboxy-terminal domain phosphatase-like protein,
           putative | LC | chr2:27152477-27153886 | 20130731
          Length = 172

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 46  VHFTFFDKLEEDYVDRDVRKVVSSLRSEVLSGCVIVFF-RTKPAPLPFLQEIAMQMGATC 104
           +   +FD +        V  V+SSLR EVLSGCVIVF        L  L++IA ++GAT 
Sbjct: 91  IRLRYFDNVISLLQSIHVFHVLSSLRGEVLSGCVIVFSCAFHGHDLRKLRKIAERLGATH 150

Query: 105 MEKLDPSVTHVVST 118
           + +L P+VTHVV+ 
Sbjct: 151 LTELRPTVTHVVAN 164