Miyakogusa Predicted Gene

Lj0g3v0205799.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0205799.4 Non Characterized Hit- tr|I3T6I6|I3T6I6_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,38.17,3e-19,Transposase_24,Transposase, Ptta/En/Spm,
plant,CUFF.13148.4
         (198 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g029740.1 | hypothetical protein | LC | chr4:10339165-1034...    70   1e-12
Medtr3g463980.1 | hypothetical protein | LC | chr3:25690863-2568...    59   3e-09
Medtr0125s0060.1 | hypothetical protein | LC | scaffold0125:1941...    52   5e-07

>Medtr4g029740.1 | hypothetical protein | LC |
           chr4:10339165-10344040 | 20130731
          Length = 268

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 11  MFKWLERDEDRIKKCFHSRGTEALSNAMYRVRSGQDKGNWINPNILEQLRLEWNNEDWLE 70
           ++KWL      IKK +  + +    N MYRVR G +KG WI   + E+L   W +  W +
Sbjct: 111 IYKWLPEHVQDIKKTYLHKVSSGYQNTMYRVRKGINKGEWIPVELREKLEPNWEDSKWKD 170

Query: 71  KSRKNKQNRHSKVELNVHGGGSISAREHAKRM 102
           K+  NKQNR S  +  +H  GSI   EH+KR+
Sbjct: 171 KTEVNKQNRRSS-DGPLHACGSIPTTEHSKRL 201


>Medtr3g463980.1 | hypothetical protein | LC |
           chr3:25690863-25686451 | 20130731
          Length = 162

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 29/96 (30%)

Query: 102 MRIENNKEPTCFELYERLHRPKGKPDQW-FNETQGKIAETYQTQIAEKQSQGGEGTSQQN 160
           M+ ++N  P+C+E+Y++ H+ KG P +W F+++Q  ++E +                   
Sbjct: 36  MKTDSNMTPSCWEVYQKTHKMKGDPSKWVFSKSQMVVSENF------------------- 76

Query: 161 DDDNVFLNVVGSISKKGRIYGIGSLGADVKASSSSP 196
               +FL+VVG ++KKGRIYG+G     VKA    P
Sbjct: 77  ----IFLDVVGVVNKKGRIYGLG-----VKAGKYEP 103


>Medtr0125s0060.1 | hypothetical protein | LC |
           scaffold0125:19417-19025 | 20130731
          Length = 130

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 3/55 (5%)

Query: 141 YQTQIAEKQSQGGEGTSQQNDDD---NVFLNVVGSISKKGRIYGIGSLGADVKAS 192
           +QTQ+ EK SQ GE +SQQ  ++   ++++ +VG I+KKGRI+G+GS    VK S
Sbjct: 2   FQTQMFEKHSQSGEISSQQPTEEIYNDIYMEIVGGINKKGRIFGLGSQVVVVKES 56