Miyakogusa Predicted Gene

Lj0g3v0205479.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0205479.1 Non Characterized Hit- tr|J3M6T5|J3M6T5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G2,43.32,0.00000000000001,seg,NULL,CUFF.13128.1
         (328 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g005960.1 | membrane-associated kinase regulator-like prot...   207   1e-53

>Medtr5g005960.1 | membrane-associated kinase regulator-like
           protein, putative | HC | chr5:694029-692641 | 20130731
          Length = 353

 Score =  207 bits (526), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/319 (46%), Positives = 171/319 (53%), Gaps = 48/319 (15%)

Query: 26  ALCPADELFYKGQLLPLHLSPRISMVRXXXXXXXXXXXXXXXXXXXPRDXX------XXX 79
            LCPADELFYKGQLLPLHLSPRISMVR                   PRD           
Sbjct: 57  TLCPADELFYKGQLLPLHLSPRISMVR-TLLLSSSSTSSATSSSTAPRDSTGSSASNDST 115

Query: 80  XXXXXDLAIFPD--CDSSRPSSVAEDDELKRLHIHNSNDNNPLFQPNIKKTHKYFSLSRF 137
                DLA+FPD    SSRPSSV E+DELKRLH  +++  +      +KKT+KYFSLSRF
Sbjct: 116 TSFISDLALFPDSCNSSSRPSSVTEEDELKRLHNSSNSTRS---NSQLKKTNKYFSLSRF 172

Query: 138 SSVFRKENVAKTRDPENATGS------SVKRMSATAKEVIRKYLKKVKPLYDKLXXXXXX 191
           SSVFRKE VAKT++ E    S       +KRMS TAKEVIRKY KKVKPLY+KL      
Sbjct: 173 SSVFRKETVAKTQEGETVANSINNSSVKMKRMSVTAKEVIRKYFKKVKPLYEKL-----S 227

Query: 192 RQGRTGDLSVRTGDLTVEGSILSLLAKTERSGKEXXXXXXXXXMESGGGAGKRGWKENVG 251
           ++ +T +    +   T   +++SLL KTERS K                      KENV 
Sbjct: 228 QKQQTVEEGANSNTNTTTLTVMSLLTKTERSEK----------------------KENVA 265

Query: 252 --VLSHSFSGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKGVPAGVGGRDNSSMEELQS 309
             +LSHSFSGN                            QKGV    G RD SSMEELQS
Sbjct: 266 STMLSHSFSGNLRYSRKRSCVSSCPSSMRSSPSHSGVLSQKGVLLR-GDRDASSMEELQS 324

Query: 310 AIQGAIAHCKNSLIQSKTG 328
           AIQGAI HCKNSLI +K G
Sbjct: 325 AIQGAITHCKNSLITNKHG 343