Miyakogusa Predicted Gene
- Lj0g3v0205409.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0205409.1 Non Characterized Hit- tr|I1KJ49|I1KJ49_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41272
PE,44.35,2e-18,Zinc finger domain,Zinc finger, RanBP2-type; seg,NULL;
zf-RanBP,Zinc finger, RanBP2-type; ZF_RANBP2_,CUFF.13118.1
(509 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g032260.1 | zinc finger (Ran-binding) family protein | HC ... 641 0.0
Medtr6g069400.1 | zinc finger (Ran-binding) family protein | HC ... 244 1e-64
Medtr7g113360.1 | zinc finger (Ran-binding) family protein | HC ... 217 2e-56
Medtr7g087047.1 | zinc finger (Ran-binding) family protein | HC ... 128 1e-29
Medtr7g087047.2 | zinc finger (Ran-binding) family protein | HC ... 93 5e-19
Medtr2g075470.1 | plant/T3F20-21 protein, putative | HC | chr2:3... 67 5e-11
Medtr2g075450.1 | hypothetical protein | LC | chr2:31562549-3155... 60 4e-09
>Medtr1g032260.1 | zinc finger (Ran-binding) family protein | HC |
chr1:11448862-11445087 | 20130731
Length = 506
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/460 (69%), Positives = 356/460 (77%), Gaps = 18/460 (3%)
Query: 55 PAVQVSHPWPEWVGLMECLLKNGYFHAEGNPFKNADIGAKEANVIRTACLNFGRDHFDLV 114
PA Q+SHPWPEWV LME L+K G+FHAEGNPF+N +GAKE+N+IRTACLNFGRDH ++
Sbjct: 56 PAFQISHPWPEWVYLMEYLIKKGHFHAEGNPFENPPLGAKESNLIRTACLNFGRDHAHIL 115
Query: 115 RVLSRKDIASTVVFGCPSLDRKVINSGKRLRAYLGIDEGNVCSSCNLRGDCERAFVNARE 174
R LSRKDI V FGCPSLDRKV+NSGKRLRAY GIDEGNVCSSCNLRGDCERAFV ARE
Sbjct: 116 RFLSRKDIGVIVTFGCPSLDRKVVNSGKRLRAYAGIDEGNVCSSCNLRGDCERAFVKARE 175
Query: 175 DEGGRTVDVMRIILTYGLDSIIASVENKPCLKKQVTESVRRLLKEIVDHSNEDKNSNFPD 234
DEGGRTVDVMRIILTYGLD II SV+NKP L K V ESVRRLLK+IV+ E+ S FPD
Sbjct: 176 DEGGRTVDVMRIILTYGLDPIIGSVDNKPSLNKMVKESVRRLLKKIVECGTEENPSTFPD 235
Query: 235 TTEAVNEQVHPNLQAKGKKNVPMKQGDWICPKCNFLNFARNIRCLHCDCFCEEKIKQLKE 294
TE E+VHPN KGKK+VP+KQGDW+CPKCNF NFARNI+CLHCD FCEEKIKQLKE
Sbjct: 236 ITEDAVEEVHPNPLDKGKKDVPLKQGDWLCPKCNFHNFARNIKCLHCDNFCEEKIKQLKE 295
Query: 295 DNNHLPLKKGDWICNKCNFLNFARNTRCLLCKENPSNRQINPGEWECDSCNYINFRRNMA 354
DNNHLPLKKGDWIC+KCNFLNFA+NTRCL CKE PSNR+INPGEWEC+SCNYINFRRNM
Sbjct: 296 DNNHLPLKKGDWICDKCNFLNFAKNTRCLQCKEGPSNRRINPGEWECESCNYINFRRNMV 355
Query: 355 CLKCDHRRPKMSNASNTPQQEQEVKNNHKNRK---FVXXXXXXXXXXXXXXXXKNRNRER 411
CLKCDHRRPK+SNASN+ Q Q NH + F K+RNR+
Sbjct: 356 CLKCDHRRPKVSNASNSSPQSQGEDRNHYEKSRPTFAGYWFDGNKESPMASERKSRNRDS 415
Query: 412 ---RFVEDGTENHKCLNSSNYPVQILDFPIAGGKSELSEPLRREEYKNKALTESKMHLWQ 468
RFVE+G ENHK L +SN + LDFPIAGGK+ +SEP R E YKN+ +SK H WQ
Sbjct: 416 HKWRFVEEGIENHKYLENSNDSSEYLDFPIAGGKTSMSEPQRGEVYKNELPNQSKRHAWQ 475
Query: 469 SESDDEFCSAHNLSTDDEFCSADNLSTDDEEMAEWFGNNK 508
SE+ DDEFCS+DN STDD+EMAEWFG K
Sbjct: 476 SEA------------DDEFCSSDNPSTDDDEMAEWFGKGK 503
>Medtr6g069400.1 | zinc finger (Ran-binding) family protein | HC |
chr6:24975567-24969959 | 20130731
Length = 470
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 191/325 (58%), Gaps = 33/325 (10%)
Query: 61 HPWPEWVGLMECLLKNGYFHAEGNPFKNADIGA--KEANVIRTACLNFGRDHFDLVRVLS 118
HPWPEW+ ++ L GY K+AD + + N+++ A L+F RD +D+ ++LS
Sbjct: 66 HPWPEWISFVDRLRAKGYLS------KSADDNSVYSDINLLKDASLSFARDRYDVFKLLS 119
Query: 119 RKDIASTVVFGCPSLDRKVINSGKRLRAYLGIDEGNVCSSCNLRGDCERAFVNAREDEG- 177
+DI + V GCP+ RK +NS KRLRA+L +DEG+VCS+CNLRG C+RA+V +E E
Sbjct: 120 SEDIQAVVEDGCPNFLRKAVNSAKRLRAHLRLDEGDVCSACNLRGSCDRAYVILKESEAD 179
Query: 178 GRTVDVMRIILTYGLDSIIASVENKPCLKKQVTESVRRLLKEIVDHSN-----EDKNSNF 232
RTVD++RI+L Y +D ++ S KP ++ + S R+LL ++++ S +
Sbjct: 180 ARTVDIVRILLFYAIDPLVLSGGEKPPGREVIESSARKLLSQLIELSEWSPPPPPLPAYS 239
Query: 233 PDTTEAVNEQVHPNLQAKG----KKNVPMKQGDWICPKCNFLNFARNIRCLHCDCFCEEK 288
T++ +V P L K KNV MK+GDW+C KCNF+NF+RN +CL+C E+
Sbjct: 240 KSTSQKDVSKVKP-LSFKAAEMLSKNVEMKKGDWVCQKCNFMNFSRNRKCLNC-----EE 293
Query: 289 IKQLKEDNNHLPLKKGDWICNKCNFLNFARNTRCLLCKENPSNR---------QINPGEW 339
+D +K+GDWIC +CNF+NF+RN CL CK R Q+ G+W
Sbjct: 294 DGPKSDDPRTFEMKEGDWICTECNFMNFSRNITCLECKTEGPKRVNRLDTNEVQMKKGDW 353
Query: 340 ECDSCNYINFRRNMACLKCDHRRPK 364
C C ++NF N+ C KC RPK
Sbjct: 354 TCPQCGFMNFASNVKCFKCPEPRPK 378
>Medtr7g113360.1 | zinc finger (Ran-binding) family protein | HC |
chr7:46680792-46676183 | 20130731
Length = 886
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/331 (38%), Positives = 177/331 (53%), Gaps = 69/331 (20%)
Query: 57 VQVSHPWPEWVGLMECLLKNGYF----------------------HAEGNPFKNADIGAK 94
V+ HPWPEW+ LME L+ YF H EG F K
Sbjct: 122 VEFVHPWPEWIQLMERLVHQNYFDHRRKDEDKMVQDLGFDSSEIVHDEGLDF------TK 175
Query: 95 EANVIRTACLNFGRDHFDLVRVLSRKDIASTVVFGCPSLDRKVINSGKRLRAYLGIDEGN 154
+ + ACLNFG+D FDL+R LSR+DI V FGCP++DRKV+ SGK LR + +DEG+
Sbjct: 176 DFKSVHAACLNFGKDRFDLLRSLSRQDIQVLVGFGCPNVDRKVVFSGKLLRKLVHLDEGD 235
Query: 155 VCSSCNLRGDCERAFVNAREDEGGRTVDVMRIILTYGLDSI-IASVENKPCLK-KQVTES 212
VCSSC+LR +C+ A++ +++ RT+D+MR++LT G D I +SV NKP LK K V
Sbjct: 236 VCSSCSLRNNCDSAYLLTNKEDEARTIDIMRMLLTLGFDPINGSSVLNKPLLKQKSVKAV 295
Query: 213 VRRLLKEIVDHSNEDKNSNFPDTTEAVNEQVHPNLQAKGKKNVPMKQGDWICPKCNFLNF 272
VR+LL E+V K S+ P + PNL K P K
Sbjct: 296 VRKLLHEVV------KLSSVP---------IDPNLPPPVIKKPPPKVK------------ 328
Query: 273 ARNIRCLHCDCFCEEKIKQLKEDNNHLPLKKGDWICNKCNFLNFARNTRCLLCKENPSNR 332
+++ D+ + +K+GDW+C KC+F+NFA+N CL C R
Sbjct: 329 ----------QPPPTPKRRVGRDD--VEMKRGDWLCPKCDFMNFAKNNVCLQCDAKRPKR 376
Query: 333 QINPGEWECDSCNYINFRRNMACLKCDHRRP 363
Q+ PGEWEC CN++N+RRN+ C C+ +RP
Sbjct: 377 QLLPGEWECTECNFLNYRRNVVCFHCECKRP 407
>Medtr7g087047.1 | zinc finger (Ran-binding) family protein | HC |
chr7:33870448-33877120 | 20130731
Length = 1090
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 134/309 (43%), Gaps = 65/309 (21%)
Query: 55 PAVQVSHPWPEWVGLMECLLKNGYFHAEGNPFKNADIGAKEANVIRTACLNFGRDHFDLV 114
P HPWPE+ + + GY ++ E +ACL+F RD +L+
Sbjct: 72 PLTGTHHPWPEFSRFLSHISSAGYTSPSDAFSPTVELSQAEV----SACLSFARDRPNLL 127
Query: 115 RVLSRKDIASTVVFGCPSLDRKVINSGKRLRAYLGIDEGNVCSSCNLRGDCERAFVNARE 174
R+LS +D+A V G P + +S +++++L GD A +
Sbjct: 128 RLLSIRDVAVVVQHGTPFMFSDSQDSVSKMKSFLS------------NGDS-----TALD 170
Query: 175 DEGGRTVDVMRIILTYGLDSIIASVENKPCLKKQVTESVRRLLKEIVDHSNEDKNSNFPD 234
+ VD+M+ +L+Y +++S N + V SVR L E+ S N D
Sbjct: 171 SDKANMVDLMKFMLSYASSCLVSSEMNNLYNRNLVESSVRNLFGELFKLSYSTPGPNSFD 230
Query: 235 TTEAVNEQVHPNLQAKGKKNVPMKQGDWICPKCNFLNFARNIRCLHCDCFCEEKIKQLKE 294
+ + N G+ M G +NI
Sbjct: 231 SVQ--------NQMPGGRFEHTMPPG-------------QNIE----------------- 252
Query: 295 DNNHLPLKKGDWICNKCNFLNFARNTRCLLCKENPSNRQINPGEWECDSCNYINFRRNMA 354
+K+GDWIC +CNF+NFARN +CL C+E RQ+ GEWEC C++ N+ RN+A
Sbjct: 253 ------MKRGDWICPRCNFMNFARNMKCLECEEARPKRQLTGGEWECPQCDFHNYGRNVA 306
Query: 355 CLKCDHRRP 363
CL+CD +RP
Sbjct: 307 CLRCDCKRP 315
>Medtr7g087047.2 | zinc finger (Ran-binding) family protein | HC |
chr7:33870448-33876993 | 20130731
Length = 915
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 51/66 (77%)
Query: 298 HLPLKKGDWICNKCNFLNFARNTRCLLCKENPSNRQINPGEWECDSCNYINFRRNMACLK 357
++ +K+GDWIC +CNF+NFARN +CL C+E RQ+ GEWEC C++ N+ RN+ACL+
Sbjct: 75 NIEMKRGDWICPRCNFMNFARNMKCLECEEARPKRQLTGGEWECPQCDFHNYGRNVACLR 134
Query: 358 CDHRRP 363
CD +RP
Sbjct: 135 CDCKRP 140
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 21/150 (14%)
Query: 181 VDVMRIILTYGLDSIIASVENKPCLKKQVTESVRRLLKEIVDHSNEDKNSNFPDTTE--- 237
VD+M+ +L+Y +++S N + V SVR L E+ S N D+ +
Sbjct: 2 VDLMKFMLSYASSCLVSSEMNNLYNRNLVESSVRNLFGELFKLSYSTPGPNSFDSVQNQM 61
Query: 238 --AVNEQVHPNLQAKGKKNVPMKQGDWICPKCNFLNFARNIRCLHCDCFCEEKIKQLKED 295
E P Q N+ MK+GDWICP+CNF+NFARN++CL C+ E + K+
Sbjct: 62 PGGRFEHTMPPGQ-----NIEMKRGDWICPRCNFMNFARNMKCLECE---EARPKRQ--- 110
Query: 296 NNHLPLKKGDWICNKCNFLNFARNTRCLLC 325
L G+W C +C+F N+ RN CL C
Sbjct: 111 -----LTGGEWECPQCDFHNYGRNVACLRC 135
>Medtr2g075470.1 | plant/T3F20-21 protein, putative | HC |
chr2:31567796-31564591 | 20130731
Length = 309
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 16/170 (9%)
Query: 65 EWVGLMECLLKNGYFHAE--GNPFKNADIGAKEA----NVIRTACLNFGRDHFDLVRVLS 118
E V + L +NGYF G + +IG E ++ A F D+ ++ + LS
Sbjct: 143 ETVMFLYHLYQNGYFEDAKFGYVYGRFNIGWFETPYALGYVKFAAKKFANDNLEIAKWLS 202
Query: 119 RKDIASTVVFGCPSLDRKVINSGKRLRAYLGIDEGNVCSSCNLRGDCERAFVNARE---D 175
+ +VFGCPS+ R + KRLR + + E VCS C LR C+ FVN D
Sbjct: 203 GSALKQMLVFGCPSISRNDVFPAKRLRKFFEVPENTVCSKCMLRESCK--FVNQNVWKCD 260
Query: 176 EGGRTVDV-MRIILTYGLDSIIASVENKPCLKKQVTESVRRLLKEIVDHS 224
+++ ++++++Y L V + + +V +SV LL E V S
Sbjct: 261 TNKLDLEIAVKVVISYALH----LVHPQLVVSDEVKKSVDHLLNEFVKLS 306
>Medtr2g075450.1 | hypothetical protein | LC |
chr2:31562549-31559979 | 20130731
Length = 282
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 65 EWVGLMECLLKNGYFH-AEGNPF----------KNADIGAKEANVIRTACLNFGRDHFDL 113
+ V ++ L +NGYF A+ + F K +G + A + F D+ +
Sbjct: 103 DMVMFLKHLYQNGYFKDAKFSKFSTRFQLVWFNKQYALG-----YAKFAAMKFATDNPQI 157
Query: 114 VRVLSRKDIASTVVFGCPSLDRKVINSGKRLRAYLGIDEGNVCSSCNLRGDCERAFVNAR 173
LS + VFGCP + R + KRLR L + E VCS C LR C+ FVN
Sbjct: 158 AEWLSGSALKQVAVFGCPFIGRNGVFPAKRLRKCLEVPENTVCSKCMLRESCK--FVN-- 213
Query: 174 EDEGG----RTVDVMRIILTYGLDSIIASVENKPCLKKQVTESVRRLLKEIVDHSNEDKN 229
E+ G DVM++I+ Y L + + + + ++ +SV LL E V S +
Sbjct: 214 ENVSGCDKLDLNDVMKVIIPYALHWM----DPQLVVSDELNKSVNHLLNEFVKLSQSPET 269
Query: 230 SN 231
++
Sbjct: 270 AS 271