Miyakogusa Predicted Gene

Lj0g3v0205369.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0205369.1 Non Characterized Hit- tr|K0SX99|K0SX99_THAOC
Uncharacterized protein (Fragment) OS=Thalassiosira
oc,42.96,4e-19,HpcH_HpaI,Aldehyde-lyase domain;
2-KETO-3-DEOXY-L-RHAMNONATE ALDOLASE,NULL;
Phosphoenolpyruvate/pyru,CUFF.13114.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g031790.1 | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolas...   246   6e-66

>Medtr1g031790.1 | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase,
           putative | HC | chr1:11152244-11150469 | 20130731
          Length = 352

 Score =  246 bits (629), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 125/179 (69%), Positives = 138/179 (77%), Gaps = 23/179 (12%)

Query: 1   MFPMVESAKSAAKAV--------------HPIVRASAYGIDEGYLNNYLDEILIMCQVES 46
           MFPM+ES KSA+KAV              HPIVRAS+YGIDEGYLNNYLDE+L+M QVES
Sbjct: 162 MFPMIESGKSASKAVSYCRFPPSGVRGSAHPIVRASSYGIDEGYLNNYLDELLVMVQVES 221

Query: 47  LEGVKKIDEIAAVDGVDCVQMGPLDLSASMGCLWDPGNKNVRDVLREAERKVLAGREXXX 106
            EGVK +++IAAVDGVDCVQMGPLDLSASMG LWDPGNK VR+ L EAERKVL  +    
Sbjct: 222 EEGVKNVEKIAAVDGVDCVQMGPLDLSASMGYLWDPGNKKVRETLMEAERKVLKRKSE-- 279

Query: 107 XXXXSEGNDDVYLGGFALPYDGPRDLRSRGYHMVSGAVDVGLFRSAAVEDVESFKASLV 165
                   DDV+L GFALP+DGP+DLRSRGYHMVSGA DVGLFRSAAVEDV  FK SLV
Sbjct: 280 -------KDDVFLSGFALPFDGPKDLRSRGYHMVSGATDVGLFRSAAVEDVRRFKESLV 331