Miyakogusa Predicted Gene
- Lj0g3v0205299.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0205299.2 Non Characterized Hit- tr|I1M535|I1M535_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43677 PE,83.51,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
Helicase_C,Helicase, C-terminal; no descr,CUFF.13110.2
(186 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 281 2e-76
Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 280 6e-76
Medtr1543s0010.1 | pre-mRNA-splicing factor ATP-dependent RNA he... 195 3e-50
Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 174 4e-44
Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 174 4e-44
Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 174 4e-44
Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 173 8e-44
Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 173 8e-44
Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:51... 172 2e-43
Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 163 7e-41
Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 163 8e-41
Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 142 2e-34
Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 142 3e-34
Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 139 1e-33
Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC | chr7:3... 132 2e-31
Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 130 5e-31
Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 130 6e-31
Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 126 1e-29
Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 126 1e-29
Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA hel... 126 1e-29
Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA hel... 126 1e-29
Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC | chr2:4... 124 4e-29
Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein |... 124 5e-29
Medtr3g055020.1 | helicase associated domain protein | HC | chr3... 97 9e-21
Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC | c... 91 7e-19
Medtr0267s0070.1 | NB-ARC domain disease resistance protein, put... 85 3e-17
Medtr4g120070.1 | RNA helicase, putative | HC | chr4:49772806-49... 83 1e-16
Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC | c... 83 1e-16
Medtr4g023590.1 | ATP-dependent RNA helicase DHX37-like protein,... 82 3e-16
Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein ... 73 1e-13
Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein ... 73 1e-13
Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC | ch... 70 2e-12
Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC | ch... 69 2e-12
Medtr1g056490.1 | ATP-dependent RNA helicase | HC | chr1:2472920... 65 5e-11
Medtr4g134790.2 | ATP-dependent RNA helicase | HC | chr4:5652988... 59 2e-09
Medtr4g134790.1 | ATP-dependent RNA helicase | HC | chr4:5652988... 59 3e-09
Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein ... 57 1e-08
Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein ... 57 1e-08
Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein ... 57 1e-08
Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein ... 57 1e-08
Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein ... 57 1e-08
Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein ... 53 2e-07
>Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr2:42091662-42101447 | 20130731
Length = 1269
Score = 281 bits (720), Expect = 2e-76, Method: Composition-based stats.
Identities = 140/194 (72%), Positives = 154/194 (79%), Gaps = 16/194 (8%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
MTIH+TSPPGDILIFMTGQD+IEAACY+LAERM+Q++ +VPKLLILPIYSQLP
Sbjct: 771 MTIHVTSPPGDILIFMTGQDEIEAACYSLAERMEQMV---SSSNKEVPKLLILPIYSQLP 827
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGI +VIDTGYGKMKVYNPR+GMDALQVF
Sbjct: 828 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIFFVIDTGYGKMKVYNPRMGMDALQVF 887
Query: 121 PVXXXXXXXXX-------------XXXXXXYLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
PV YLNEML SPVPEIQR NL NV+LLLKSL+V
Sbjct: 888 PVSRAAADQRAGRAGRTGPGTCYRLYTESAYLNEMLASPVPEIQRTNLGNVVLLLKSLKV 947
Query: 168 EDVLDFDFMDPPPR 181
E++LDFDFMDPPP+
Sbjct: 948 ENLLDFDFMDPPPQ 961
>Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 | HC | chr3:21592985-21589785 | 20130731
Length = 1066
Score = 280 bits (715), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 138/194 (71%), Positives = 154/194 (79%), Gaps = 16/194 (8%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
MTIH+TSPPGDILIFMTGQD+IEAACY+LAE+M+Q++ +VPKLLILP+YSQLP
Sbjct: 568 MTIHMTSPPGDILIFMTGQDEIEAACYSLAEKMEQMV---SSSNKEVPKLLILPVYSQLP 624
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGI YVIDTGYGKMKVYNPR+GMDALQVF
Sbjct: 625 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPRMGMDALQVF 684
Query: 121 PVXXXXXXXXXXX-------------XXXXYLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
PV YLNEML SPVPEIQR NL NV+LLLKSL+V
Sbjct: 685 PVSQAAANQRAGRAGRTGPGTCYRLYTESAYLNEMLASPVPEIQRTNLGNVVLLLKSLKV 744
Query: 168 EDVLDFDFMDPPPR 181
E++LDFDF+DPPP+
Sbjct: 745 ENLLDFDFIDPPPQ 758
>Medtr1543s0010.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 | HC | scaffold1543:1149-130 | 20130731
Length = 304
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/149 (71%), Positives = 116/149 (77%), Gaps = 13/149 (8%)
Query: 46 QVPKLLILPIYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKM 105
+VPKLLILP+YSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGI YVIDTGYGKM
Sbjct: 11 EVPKLLILPVYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIFYVIDTGYGKM 70
Query: 106 KVYNPRLGMDALQVFPVXXXXXXXXXXX-------------XXXXYLNEMLPSPVPEIQR 152
KVYNPR+GMDALQVFP YLNEML SPVPEIQR
Sbjct: 71 KVYNPRMGMDALQVFPFSQAAANQRAGRAGRTGPGTCYRLYTESAYLNEMLASPVPEIQR 130
Query: 153 ANLSNVILLLKSLRVEDVLDFDFMDPPPR 181
NL N++LLLKSL+VE++L+FDF+DPPPR
Sbjct: 131 TNLGNLVLLLKSLKVENLLNFDFIDPPPR 159
>Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 121/193 (62%), Gaps = 20/193 (10%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH+T PPGDILIF+TGQ++IE A L R + ++ +L+I PIY+ LP
Sbjct: 612 LQIHVTQPPGDILIFLTGQEEIETAEEILKHRTRGLGT-------KIAELIICPIYANLP 664
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
+LQAKIF+ +GARK ++ATNIAETSLT+DGI YVID G+ KMK YNP+ GM++L V
Sbjct: 665 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYNPKTGMESLLVS 724
Query: 121 PVXXXXXXXXXXXXXXX-------------YLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
P+ + N++ + VPEIQR NL+NV+L LKSL +
Sbjct: 725 PISKASAMQRAGRSGRTGPGKCFRLYTAYNFQNDLDDNTVPEIQRTNLTNVVLTLKSLGI 784
Query: 168 EDVLDFDFMDPPP 180
D+L F+FMDPPP
Sbjct: 785 HDLLHFEFMDPPP 797
>Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 121/193 (62%), Gaps = 20/193 (10%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH+T PPGDILIF+TGQ++IE A L R + ++ +L+I PIY+ LP
Sbjct: 612 LQIHVTQPPGDILIFLTGQEEIETAEEILKHRTRGLGT-------KIAELIICPIYANLP 664
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
+LQAKIF+ +GARK ++ATNIAETSLT+DGI YVID G+ KMK YNP+ GM++L V
Sbjct: 665 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYNPKTGMESLLVS 724
Query: 121 PVXXXXXXXXXXXXXXX-------------YLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
P+ + N++ + VPEIQR NL+NV+L LKSL +
Sbjct: 725 PISKASAMQRAGRSGRTGPGKCFRLYTAYNFQNDLDDNTVPEIQRTNLTNVVLTLKSLGI 784
Query: 168 EDVLDFDFMDPPP 180
D+L F+FMDPPP
Sbjct: 785 HDLLHFEFMDPPP 797
>Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 174 bits (442), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 121/193 (62%), Gaps = 20/193 (10%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH+T PPGDILIF+TGQ++IE A L R + ++ +L+I PIY+ LP
Sbjct: 612 LQIHVTQPPGDILIFLTGQEEIETAEEILKHRTRGLGT-------KIAELIICPIYANLP 664
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
+LQAKIF+ +GARK ++ATNIAETSLT+DGI YVID G+ KMK YNP+ GM++L V
Sbjct: 665 TELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFVKMKSYNPKTGMESLLVS 724
Query: 121 PVXXXXXXXXXXXXXXX-------------YLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
P+ + N++ + VPEIQR NL+NV+L LKSL +
Sbjct: 725 PISKASAMQRAGRSGRTGPGKCFRLYTAYNFQNDLDDNTVPEIQRTNLTNVVLTLKSLGI 784
Query: 168 EDVLDFDFMDPPP 180
D+L F+FMDPPP
Sbjct: 785 HDLLHFEFMDPPP 797
>Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 173 bits (439), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 118/192 (61%), Gaps = 20/192 (10%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IHLT P GDIL+F+TGQ++I+ AC +L ERM + VP+L+ILP+YS LP
Sbjct: 770 LQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGL-------GKNVPELIILPVYSALP 822
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
+++Q++IF A G RK +VATNIAE SLT+DGI YVID G+ K VYNP+ G+D+L +
Sbjct: 823 SEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVIT 882
Query: 121 PVXXXXXXXXXXX-------------XXXXYLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
P+ Y NEM P+ +PEIQR NL L +K++ +
Sbjct: 883 PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGMTTLSMKAMGI 942
Query: 168 EDVLDFDFMDPP 179
D+L FDFMDPP
Sbjct: 943 NDLLSFDFMDPP 954
>Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 173 bits (439), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 118/192 (61%), Gaps = 20/192 (10%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IHLT P GDIL+F+TGQ++I+ AC +L ERM + VP+L+ILP+YS LP
Sbjct: 770 LQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGL-------GKNVPELIILPVYSALP 822
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
+++Q++IF A G RK +VATNIAE SLT+DGI YVID G+ K VYNP+ G+D+L +
Sbjct: 823 SEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVIT 882
Query: 121 PVXXXXXXXXXXX-------------XXXXYLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
P+ Y NEM P+ +PEIQR NL L +K++ +
Sbjct: 883 PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGMTTLSMKAMGI 942
Query: 168 EDVLDFDFMDPP 179
D+L FDFMDPP
Sbjct: 943 NDLLSFDFMDPP 954
>Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:51667204-51673502 | 20130731
Length = 1154
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 118/192 (61%), Gaps = 20/192 (10%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IHLT P GDIL+F+TGQ++I+ AC +L ERM + VP+L+ILP+YS LP
Sbjct: 701 LQIHLTEPEGDILLFLTGQEEIDFACQSLHERMKGL-------GKNVPELIILPVYSALP 753
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
+++Q++IF A G RK +VATNIAE SLT+DGI YVID G+ K VYNP+ G+D+L +
Sbjct: 754 SEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVIT 813
Query: 121 PVXXXXXXXXXXX-------------XXXXYLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
P+ Y NEM P+ +PEIQR NL L +K++ +
Sbjct: 814 PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTAIPEIQRINLGMTTLSMKAMGI 873
Query: 168 EDVLDFDFMDPP 179
D+L FDF+DPP
Sbjct: 874 NDLLSFDFLDPP 885
>Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 904
Score = 163 bits (413), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 117/195 (60%), Gaps = 22/195 (11%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH T PPGDIL+F+TGQ++IE A L R+ + ++ +L+I PIY+ LP
Sbjct: 455 LQIHTTQPPGDILLFLTGQEEIETAEEHLKLRVGALGT-------KIAELIICPIYANLP 507
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
++QAKIF+ GARK ++ATNIAETSLT+DGI YVID G+ KMK YNPR GM++L V
Sbjct: 508 TEIQAKIFEPTPKGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLVT 567
Query: 121 PVXXXXXXXXXXXX-------------XXXYLNEMLPSPVPEIQRANLSNVILLLKSL-- 165
P+ + N+M + PEIQR NL+NV+L L SL
Sbjct: 568 PISKASAMQRAGRSGRTGPGKCFRLYTSYSFQNDMEDNTTPEIQRTNLANVVLTLISLGI 627
Query: 166 RVEDVLDFDFMDPPP 180
+E + F+FMDPPP
Sbjct: 628 EIEKLFQFEFMDPPP 642
>Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 768
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 117/195 (60%), Gaps = 22/195 (11%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH T PPGDIL+F+TGQ++IE A L R+ + ++ +L+I PIY+ LP
Sbjct: 455 LQIHTTQPPGDILLFLTGQEEIETAEEHLKLRVGALGT-------KIAELIICPIYANLP 507
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
++QAKIF+ GARK ++ATNIAETSLT+DGI YVID G+ KMK YNPR GM++L V
Sbjct: 508 TEIQAKIFEPTPKGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLVT 567
Query: 121 PVXXXXXXXXXXXX-------------XXXYLNEMLPSPVPEIQRANLSNVILLLKSL-- 165
P+ + N+M + PEIQR NL+NV+L L SL
Sbjct: 568 PISKASAMQRAGRSGRTGPGKCFRLYTSYSFQNDMEDNTTPEIQRTNLANVVLTLISLGI 627
Query: 166 RVEDVLDFDFMDPPP 180
+E + F+FMDPPP
Sbjct: 628 EIEKLFQFEFMDPPP 642
>Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr5:31994096-31996650 | 20130731
Length = 808
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 105/178 (58%), Gaps = 20/178 (11%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH T PPGDIL+F+ GQ++IE+ L +M + ++ +L+I PIY+ LP
Sbjct: 410 LQIHATQPPGDILVFLAGQEEIESVEENLKYQMRGLGT-------KLDELIICPIYANLP 462
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
+LQA+IF+ GARK ++ATNIAETSLT+DGI YVID G+ KMK YNPR GM++L V
Sbjct: 463 TELQARIFEPTPKGARKVVLATNIAETSLTIDGIKYVIDPGFFKMKCYNPRTGMESLLVT 522
Query: 121 PVXXXXXXXXXXXX-------------XXXYLNEMLPSPVPEIQRANLSNVILLLKSL 165
P+ + N++ + PEIQR NL+NV+L L SL
Sbjct: 523 PISKASAMQRAGRSGRTGPGKCFRLYTAYSFQNDLDDNTTPEIQRTNLANVVLTLNSL 580
>Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr1:38781865-38776805 | 20130731
Length = 721
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 114/197 (57%), Gaps = 27/197 (13%)
Query: 3 IHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPAD 62
IH+ P GDIL+F+TG+++IE AC +++ + + QV + +P+YS LP
Sbjct: 265 IHMCEPAGDILVFLTGEEEIEDACRKISKEVANM-------GDQVGPVKAVPLYSTLPPA 317
Query: 63 LQAKIFQKA-----EDG--ARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMD 115
+Q KIF+ A E G RK +V+TNIAETSLT+DGI YVID G+ K KVYNPR+ ++
Sbjct: 318 MQQKIFEPAPPPVKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRVRVE 377
Query: 116 ALQVFPVXXXXXXXXXXX-------------XXXXYLNEMLPSPVPEIQRANLSNVILLL 162
+L V P+ + N++ P PEI R+NL+N +L L
Sbjct: 378 SLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTL 437
Query: 163 KSLRVEDVLDFDFMDPP 179
K L ++D++ FDFMDPP
Sbjct: 438 KKLGIDDLVHFDFMDPP 454
>Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr4:33389635-33387508 | 20130731
Length = 683
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 112/197 (56%), Gaps = 27/197 (13%)
Query: 3 IHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPAD 62
IH P GDIL+F+TG+++IE AC ++ ++ + +V + +L +YS LP
Sbjct: 227 IHTKEPAGDILVFLTGEEEIEDACRKISNKVANL-------GEKVGPVKVLSLYSTLPPA 279
Query: 63 LQAKIFQKA-----EDG--ARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMD 115
+Q KIF+ A E G RK +V+TNIAETSLT+DGI YVID G+ K KVYNPR ++
Sbjct: 280 MQQKIFEPAPPPVKEGGLPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRTRVE 339
Query: 116 ALQVFPVXXXXXXXXXXX-------------XXXXYLNEMLPSPVPEIQRANLSNVILLL 162
+L V P+ + N++ P PEI R+NL+N +L L
Sbjct: 340 SLLVSPISKASAHQRSGRAGRTQPGKCYRLYTEISFSNDLQPQTYPEILRSNLANTVLTL 399
Query: 163 KSLRVEDVLDFDFMDPP 179
K L ++D++ FDFMDPP
Sbjct: 400 KKLGIDDLVHFDFMDPP 416
>Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC |
chr7:38011601-38003021 | 20130731
Length = 725
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 109/191 (57%), Gaps = 19/191 (9%)
Query: 3 IHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPAD 62
+H PGDIL+F+TGQ++I+A + ER+ ++ + KL +LPIY+ LP++
Sbjct: 293 VHQDEAPGDILVFLTGQEEIDAVERLIKERLSKL-------PQENQKLQVLPIYAALPSE 345
Query: 63 LQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVFPV 122
Q + F+ A G RK I+ATNIAETS+T+ GI +VID G K + Y+P GM++L V P
Sbjct: 346 QQMRAFEPAPSGFRKVILATNIAETSITIPGIKHVIDPGLVKARSYDPGKGMESLIVVPT 405
Query: 123 XXXXXXXXXXXXXXX------------YLNEMLPSPVPEIQRANLSNVILLLKSLRVEDV 170
++ S +PEI+R NLSNVIL LK+L V+D+
Sbjct: 406 SKSQALQRSGRAGREGPGKCFRLYPENEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDI 465
Query: 171 LDFDFMDPPPR 181
L FDF++ P R
Sbjct: 466 LGFDFIEKPSR 476
>Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 587
Score = 130 bits (328), Expect = 5e-31, Method: Composition-based stats.
Identities = 64/122 (52%), Positives = 86/122 (70%), Gaps = 7/122 (5%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH T PPGDIL+F+TGQ++IE A L R+ + ++ +L+I PIY+ LP
Sbjct: 455 LQIHTTQPPGDILLFLTGQEEIETAEEHLKLRVGAL-------GTKIAELIICPIYANLP 507
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
++QAKIF+ GARK ++ATNIAETSLT+DGI YVID G+ KMK YNPR GM++L V
Sbjct: 508 TEIQAKIFEPTPKGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLVT 567
Query: 121 PV 122
P+
Sbjct: 568 PI 569
>Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:20814127-20817509 | 20130731
Length = 715
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 109/197 (55%), Gaps = 27/197 (13%)
Query: 3 IHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPAD 62
IH P GD+L+F+TG+++IE AC ++ + V + ++P+YS LP
Sbjct: 288 IHTLEPAGDVLVFLTGEEEIEDACRKISNEV-------AIRGDTVGPVKVVPLYSTLPPA 340
Query: 63 LQAKIFQKA-----EDG--ARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMD 115
+Q +IF+ A E G RK +V+TNIAETSLT++GI YV+D G K KVYNPR ++
Sbjct: 341 MQHRIFEPAPPPVREGGLPGRKILVSTNIAETSLTINGIVYVVDPGLAKQKVYNPRARVE 400
Query: 116 ALQVFPVXXXXXXXXXXX-------------XXXXYLNEMLPSPVPEIQRANLSNVILLL 162
+L V P+ + N++ P PEI R+NL+N +L L
Sbjct: 401 SLLVSPISKASAVQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYPEILRSNLANTVLTL 460
Query: 163 KSLRVEDVLDFDFMDPP 179
K L ++D++ FDFMDPP
Sbjct: 461 KKLGIDDLVHFDFMDPP 477
>Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr8:15840782-15843798 | 20130731
Length = 650
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 102/182 (56%), Gaps = 41/182 (22%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH T P +IL+F++GQ++IE L RM ++ ++ +L+I PIY+ LP
Sbjct: 275 LQIHATQSPREILVFLSGQEEIETVEEILKHRMRRL-------GTKIAELIICPIYANLP 327
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
+ QAKIF+ +GARK ++ATNIAET +T+DGI YVID G+ K+
Sbjct: 328 TEPQAKIFEPTPEGARKVVLATNIAETPVTIDGIKYVIDPGFCKI--------------- 372
Query: 121 PVXXXXXXXXXXXXXXXYLNEMLPSPVPEIQRANLSNVILLLKSLRVE--DVLDFDFMDP 178
+ N++ PEIQR NL+NV+L L SLR+E +L F+FMDP
Sbjct: 373 -----------------FENDLEDDTTPEIQRTNLANVVLTLNSLRIEYDKLLHFEFMDP 415
Query: 179 PP 180
PP
Sbjct: 416 PP 417
>Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490015-34479594 | 20130731
Length = 697
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 105/201 (52%), Gaps = 21/201 (10%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH+ P GDILIFMTGQDDIE + E++ + +I P++ LP
Sbjct: 202 LDIHIRQPEGDILIFMTGQDDIEKLVMKMEEKVRAL------DEGSCMDAIIFPLHGSLP 255
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
+LQ ++F R+ IVATNIAETSLTVDG+ YVID+GY K + YNP M +L V
Sbjct: 256 PELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSRMYSLDVV 315
Query: 121 PVXXXXXXXXXXXX-------------XXXYLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
+ Y +E L VPEIQR++L+ +L LKSL +
Sbjct: 316 QISKVQANQRAGRAGRTRPGKCYRLYPSQIYHDEFLDVTVPEIQRSSLAGSVLYLKSLDL 375
Query: 168 E--DVLDFDFMDPPPRKMERD 186
D+L FDF+D P + RD
Sbjct: 376 PDIDILKFDFLDSPSPESLRD 396
>Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490000-34479591 | 20130731
Length = 589
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 105/201 (52%), Gaps = 21/201 (10%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH+ P GDILIFMTGQDDIE + E++ + +I P++ LP
Sbjct: 202 LDIHIRQPEGDILIFMTGQDDIEKLVMKMEEKVRAL------DEGSCMDAIIFPLHGSLP 255
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
+LQ ++F R+ IVATNIAETSLTVDG+ YVID+GY K + YNP M +L V
Sbjct: 256 PELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSRMYSLDVV 315
Query: 121 PVXXXXXXXXXXXXXXX-------------YLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
+ Y +E L VPEIQR++L+ +L LKSL +
Sbjct: 316 QISKVQANQRAGRAGRTRPGKCYRLYPSQIYHDEFLDVTVPEIQRSSLAGSVLYLKSLDL 375
Query: 168 E--DVLDFDFMDPPPRKMERD 186
D+L FDF+D P + RD
Sbjct: 376 PDIDILKFDFLDSPSPESLRD 396
>Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34489993-34479594 | 20130731
Length = 647
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 105/201 (52%), Gaps = 21/201 (10%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH+ P GDILIFMTGQDDIE + E++ + +I P++ LP
Sbjct: 202 LDIHIRQPEGDILIFMTGQDDIEKLVMKMEEKVRAL------DEGSCMDAIIFPLHGSLP 255
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
+LQ ++F R+ IVATNIAETSLTVDG+ YVID+GY K + YNP M +L V
Sbjct: 256 PELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSRMYSLDVV 315
Query: 121 PVXXXXXXXXXXXX-------------XXXYLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
+ Y +E L VPEIQR++L+ +L LKSL +
Sbjct: 316 QISKVQANQRAGRAGRTRPGKCYRLYPSQIYHDEFLDVTVPEIQRSSLAGSVLYLKSLDL 375
Query: 168 E--DVLDFDFMDPPPRKMERD 186
D+L FDF+D P + RD
Sbjct: 376 PDIDILKFDFLDSPSPESLRD 396
>Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC |
chr2:4513881-4525364 | 20130731
Length = 701
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 105/199 (52%), Gaps = 21/199 (10%)
Query: 1 MTIHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLP 60
+ IH GD+L+F+TGQDDI+AA + E + L++LP+YS LP
Sbjct: 272 LLIHERESTGDVLVFLTGQDDIDAAVHLFNEEIQN-------NRKHSSGLVVLPLYSGLP 324
Query: 61 ADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVF 120
Q +F A G RK +++TNIAETSLT++GI YV+D+G+ K + YNP ++ L V
Sbjct: 325 RADQELVFSPAPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVA 384
Query: 121 PVXXXXXXXXXXXXXXX-------------YLNEMLPSPVPEIQRANLSNVILLLKSLRV 167
P+ +LN M +PEIQR+NL + ++ LK+L +
Sbjct: 385 PISRASARQRAGRAGRVRPGKCYRLYTEEFFLNHMSNEGIPEIQRSNLVSCVIQLKALGI 444
Query: 168 EDVLDFDF-MDPPPRKMER 185
+++L FD+ P P M R
Sbjct: 445 DNILGFDWPASPSPEAMIR 463
>Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein | HC
| chr4:39455746-39462206 | 20130731
Length = 519
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 3 IHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPAD 62
+H PGDIL+F+TGQ++I+A + ER+ ++ + +L ++PIY+ LP++
Sbjct: 81 VHQDEAPGDILVFLTGQEEIDAVERLIKERLSKL-------PQEYQRLQVVPIYAALPSE 133
Query: 63 LQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVFPV 122
Q + F A G K I+ATNIAETS+T+ GI YVID G K + Y+P GM++L VF
Sbjct: 134 QQMRAFAPAPSGFHKVILATNIAETSITIPGIKYVIDPGLVKARSYDPGKGMESLIVFDF 193
Query: 123 XXXXXXXXXXXXXXX------------------YLNEMLPSPVPEIQRANLSNVILLLKS 164
++ S +PEI+R NLSNVIL LK+
Sbjct: 194 ARRVVQIDYLHFGNSGRAGREGPGKCFRLYPENEFEKLEDSTMPEIKRCNLSNVILQLKA 253
Query: 165 LRVEDVLDFDFMDPPPR 181
L V+D+L FDF++ P R
Sbjct: 254 LGVDDILGFDFIEKPSR 270
>Medtr3g055020.1 | helicase associated domain protein | HC |
chr3:21626884-21623913 | 20130731
Length = 445
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 13/87 (14%)
Query: 108 YNPRLGMDALQVFPVXXXXXXXXXXX-------------XXXXYLNEMLPSPVPEIQRAN 154
YNPR+GMDALQVFPV YLNEML SPVPEIQR N
Sbjct: 49 YNPRMGMDALQVFPVSQAAANQRAGRAGRTGPGACYRLYTESAYLNEMLASPVPEIQRTN 108
Query: 155 LSNVILLLKSLRVEDVLDFDFMDPPPR 181
L NV+LLLKSL+VE++LDFDF+DPPP+
Sbjct: 109 LGNVVLLLKSLKVENLLDFDFIDPPPQ 135
>Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC |
chr3:3875260-3882505 | 20130731
Length = 1731
Score = 90.5 bits (223), Expect = 7e-19, Method: Composition-based stats.
Identities = 61/189 (32%), Positives = 89/189 (47%), Gaps = 29/189 (15%)
Query: 3 IHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPAD 62
IH T G IL F+T Q D+E AC + P + LP++ +L ++
Sbjct: 478 IHRTEKEGTILAFLTSQLDVEWACEKF----------------EAPSAVALPLHGKLSSE 521
Query: 63 LQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVFPV 122
Q IF K G RK I +TN+AETSLT+ G+ YVID+G K ++P GM+ L+V +
Sbjct: 522 EQFHIF-KNYPGKRKVIFSTNVAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVCWI 580
Query: 123 XXXXXXXXX------------XXXXXXYLNEMLPSPVPEIQRANLSNVILLLKSLRVEDV 170
M + PEI+R +L +L + +L V++V
Sbjct: 581 SQSSAKQRAGRAGRTEPGRCYRLYSEADYQSMETNQDPEIRRVHLGVAVLKILALGVKNV 640
Query: 171 LDFDFMDPP 179
DFDF+D P
Sbjct: 641 QDFDFVDAP 649
>Medtr0267s0070.1 | NB-ARC domain disease resistance protein, putative
| LC | scaffold0267:17737-24509 | 20130731
Length = 1982
Score = 85.1 bits (209), Expect = 3e-17, Method: Composition-based stats.
Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 29/182 (15%)
Query: 10 GDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAKIFQ 69
G IL F+T Q D+E AC + P + LP++ +L ++ Q IF
Sbjct: 1140 GTILAFLTSQLDVEWACEKF----------------EAPSAVALPLHGKLSSEEQFHIF- 1182
Query: 70 KAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVFPVXXXXXXX 129
K G RK I +TN+AETSLT+ G+ YVID+G K ++P GM+ L+V +
Sbjct: 1183 KNYPGKRKVIFSTNVAETSLTIPGVKYVIDSGLVKDSRFDPSSGMNVLKVCWISQSSAKQ 1242
Query: 130 XX------------XXXXXXYLNEMLPSPVPEIQRANLSNVILLLKSLRVEDVLDFDFMD 177
M + PEI+R +L +L + +L V++V DFDF+D
Sbjct: 1243 RAGHAGRTEPGRCYRLYSEADYQSMETNQDPEIRRVHLGVAVLKILALGVKNVQDFDFVD 1302
Query: 178 PP 179
P
Sbjct: 1303 AP 1304
>Medtr4g120070.1 | RNA helicase, putative | HC |
chr4:49772806-49778936 | 20130731
Length = 1256
Score = 83.2 bits (204), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 50 LLILPIYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYN 109
L +LP+Y+ LPA Q ++F ++G R +VATN+AETSLT+ GI YV+DTG K+K Y+
Sbjct: 618 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 677
Query: 110 PRLGMDALQVFPVXXXXXXXXX-------------XXXXXXYLNEMLPSPVPEIQRANLS 156
GM+ +V + + NE E+++ +
Sbjct: 678 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 737
Query: 157 NVILLLKSLRVEDVLDFDF 175
V+LLLKS++++ V +F F
Sbjct: 738 GVVLLLKSMQIKKVANFPF 756
>Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC |
chr3:39323283-39316838 | 20130731
Length = 1718
Score = 83.2 bits (204), Expect = 1e-16, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 3 IHLTSPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPAD 62
IH T G IL F+T Q ++E AC + + LP++ +L ++
Sbjct: 479 IHKTEKEGAILAFLTSQVEVEWACENF----------------KALSAVALPLHGKLSSE 522
Query: 63 LQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVFPV 122
Q +FQK G RK I +TN+AETS+T+ G+ YVID+G K ++P GM+ L+V +
Sbjct: 523 EQFHVFQKYP-GKRKVIFSTNLAETSITIPGVKYVIDSGLVKDCRFDPCTGMNVLKVCWI 581
Query: 123 XXXXXXXXX------------XXXXXXYLNEMLPSPVPEIQRANLSNVILLLKSLRVEDV 170
M + PEI+R +L +L + +L V++V
Sbjct: 582 SQSSANQRAGRAGRTEPGRCYRMYSEADYRSMELNQEPEIRRVHLGVAVLKILALGVKNV 641
Query: 171 LDFDFMD-PPPRKME 184
DFDF+D P P +E
Sbjct: 642 QDFDFVDAPSPSSIE 656
>Medtr4g023590.1 | ATP-dependent RNA helicase DHX37-like protein,
putative | HC | chr4:7996592-7989993 | 20130731
Length = 1331
Score = 82.0 bits (201), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 13/139 (9%)
Query: 50 LLILPIYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYN 109
L +LP+Y+ LPA Q ++F ++G R +VATN+AETSLT+ GI YV+DTG K+K Y+
Sbjct: 692 LFVLPLYAMLPAAAQLRVFDGVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVKNYD 751
Query: 110 PRLGMDALQVFPVXXXXXXXXX-------------XXXXXXYLNEMLPSPVPEIQRANLS 156
GM+ +V + + NE E+++ +
Sbjct: 752 SSNGMETYEVKWISKASAAQRAGRAGRTAAGHCYRLYSSAAFSNEFPEFSPAEVEKVPVH 811
Query: 157 NVILLLKSLRVEDVLDFDF 175
V+LLLKS++++ V +F F
Sbjct: 812 GVVLLLKSMQIKKVANFPF 830
>Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360105 | 20130731
Length = 1248
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 33/183 (18%)
Query: 9 PGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAKIF 68
PG +L+FMTG DDI + L E++ V ++L+L + + + Q IF
Sbjct: 607 PGAVLVFMTGWDDISS----LKEKLQTHYVLGDP-----KRVLLLTCHGSMASSEQKLIF 657
Query: 69 QKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQ----VFPVXX 124
++ EDG RK ++ATNIAETS+TVD + +V+D G K Y DAL + P
Sbjct: 658 EEPEDGVRKVVLATNIAETSITVDDVVFVLDCGKAKETSY------DALNNTPCLLPTWI 711
Query: 125 XXXXXXXXXXXXXYLN-----EMLPSPV---------PEIQRANLSNVILLLKSLRVEDV 170
+ + P V PEI R L ++ L +KSLR+ +
Sbjct: 712 SKASAHQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSI 771
Query: 171 LDF 173
DF
Sbjct: 772 SDF 774
>Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360401 | 20130731
Length = 1222
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 33/183 (18%)
Query: 9 PGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAKIF 68
PG +L+FMTG DDI + L E++ V ++L+L + + + Q IF
Sbjct: 607 PGAVLVFMTGWDDISS----LKEKLQTHYVLGDP-----KRVLLLTCHGSMASSEQKLIF 657
Query: 69 QKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQ----VFPVXX 124
++ EDG RK ++ATNIAETS+TVD + +V+D G K Y DAL + P
Sbjct: 658 EEPEDGVRKVVLATNIAETSITVDDVVFVLDCGKAKETSY------DALNNTPCLLPTWI 711
Query: 125 XXXXXXXXXXXXXYLN-----EMLPSPV---------PEIQRANLSNVILLLKSLRVEDV 170
+ + P V PEI R L ++ L +KSLR+ +
Sbjct: 712 SKASAHQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLRLGSI 771
Query: 171 LDF 173
DF
Sbjct: 772 SDF 774
>Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1190
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 7 SPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAK 66
S G IL+F +G DDI A L K +++ ++S +P Q K
Sbjct: 551 SKDGGILVFFSGWDDINRAREKL---------LASSFFNNPSKFVVISLHSMVPTLEQKK 601
Query: 67 IFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQ 118
+F++ G RK +++TN+AET++T+D I YVIDTG K K Y+P + LQ
Sbjct: 602 VFKRPPPGCRKIVLSTNLAETAVTIDDIVYVIDTGRMKEKSYDPYNNVSTLQ 653
>Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1077
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 9/112 (8%)
Query: 7 SPPGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAK 66
S G IL+F +G DDI A + + K +++ ++S +P Q K
Sbjct: 438 SKDGGILVFFSGWDDINRA---------REKLLASSFFNNPSKFVVISLHSMVPTLEQKK 488
Query: 67 IFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQ 118
+F++ G RK +++TN+AET++T+D I YVIDTG K K Y+P + LQ
Sbjct: 489 VFKRPPPGCRKIVLSTNLAETAVTIDDIVYVIDTGRMKEKSYDPYNNVSTLQ 540
>Medtr1g056490.1 | ATP-dependent RNA helicase | HC |
chr1:24729204-24739293 | 20130731
Length = 999
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 10 GDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAKIFQ 69
G IL+F+TG D+I L E +++ + K LILPI+ +P Q +IF
Sbjct: 506 GAILVFLTGWDEISK----LFEELEKNYLLGNR-----SKFLILPIHGSMPTIDQCEIFD 556
Query: 70 KAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYN 109
+ RK ++ATNIAE+S+T+D + YVID G K Y+
Sbjct: 557 RPPPNKRKIVLATNIAESSITIDDVVYVIDCGKAKETSYD 596
>Medtr4g134790.2 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1449
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 51 LILPIYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNP 110
++P++S + + Q K+F + RK ++ATNIAETS+T+D + YVID G K YNP
Sbjct: 938 WVIPLHSSVASTEQKKVFLRPPGNIRKVVIATNIAETSITIDDVIYVIDCGKHKENRYNP 997
Query: 111 RLGMDAL 117
+ + ++
Sbjct: 998 QKKLSSM 1004
>Medtr4g134790.1 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1452
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 51 LILPIYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNP 110
++P++S + + Q K+F + RK ++ATNIAETS+T+D + YVID G K YNP
Sbjct: 941 WVIPLHSSVASTEQKKVFLRPPGNIRKVVIATNIAETSITIDDVIYVIDCGKHKENRYNP 1000
Query: 111 RLGMDAL 117
+ + ++
Sbjct: 1001 QKKLSSM 1007
>Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 9 PGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAKIF 68
PG L+FMTG DDI + L +++ ++L+L + + + Q IF
Sbjct: 553 PGAALVFMTGWDDINS----LKDKLH-----AHPLLGDQSRVLLLACHGSMSSSEQKLIF 603
Query: 69 QKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYN 109
+ G RK ++ATN+AETS+T++ + +V+D G K Y+
Sbjct: 604 ENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYD 644
>Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 9 PGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAKIF 68
PG L+FMTG DDI + L +++ ++L+L + + + Q IF
Sbjct: 553 PGAALVFMTGWDDINS----LKDKLH-----AHPLLGDQSRVLLLACHGSMSSSEQKLIF 603
Query: 69 QKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYN 109
+ G RK ++ATN+AETS+T++ + +V+D G K Y+
Sbjct: 604 ENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYD 644
>Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 9 PGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAKIF 68
PG L+FMTG DDI + L +++ ++L+L + + + Q IF
Sbjct: 553 PGAALVFMTGWDDINS----LKDKLH-----AHPLLGDQSRVLLLACHGSMSSSEQKLIF 603
Query: 69 QKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYN 109
+ G RK ++ATN+AETS+T++ + +V+D G K Y+
Sbjct: 604 ENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYD 644
>Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 9 PGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAKIF 68
PG L+FMTG DDI + L +++ ++L+L + + + Q IF
Sbjct: 553 PGAALVFMTGWDDINS----LKDKLH-----AHPLLGDQSRVLLLACHGSMSSSEQKLIF 603
Query: 69 QKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYN 109
+ G RK ++ATN+AETS+T++ + +V+D G K Y+
Sbjct: 604 ENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYD 644
>Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 9 PGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAKIF 68
PG L+FMTG DDI + L +++ ++L+L + + + Q IF
Sbjct: 553 PGAALVFMTGWDDINS----LKDKLH-----AHPLLGDQSRVLLLACHGSMSSSEQKLIF 603
Query: 69 QKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYN 109
+ G RK ++ATN+AETS+T++ + +V+D G K Y+
Sbjct: 604 ENPGGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYD 644
>Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:16995201-16976389 | 20130731
Length = 1148
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 36/197 (18%)
Query: 9 PGDILIFMTGQDDIEAACYALAERMDQIMVXXXXXXXQVPKLLILPIYSQLPADLQAKIF 68
PG +L+FMTG +DI +C DQ+ ++L+ + + Q IF
Sbjct: 528 PGAVLVFMTGWEDI--SCL-----RDQLKAHPLLGDPN--RVLLQTCHGSMATSEQKLIF 578
Query: 69 QKAEDGARKCIVATNIAETSLTVDGIHYVIDTGYGKMKVYNPRLGMDALQVFPVXXXXXX 128
K RK ++ATN+AE S+T++ + +VID G K Y DAL P
Sbjct: 579 DKPPPNVRKIVLATNMAEASITINDVVFVIDCGKAKETTY------DALNNTPCLLPSWI 632
Query: 129 XXXXXXXXXYLN---------EMLPSPV---------PEIQRANLSNVILLLKSLRVEDV 170
+ P V PE+ R L+++ L +KSL+VE +
Sbjct: 633 SQASARQRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESI 692
Query: 171 LDF---DFMDPPPRKME 184
+F P PR ++
Sbjct: 693 GEFLSSALQAPKPRTVQ 709