Miyakogusa Predicted Gene
- Lj0g3v0205299.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0205299.1 Non Characterized Hit- tr|I1MD85|I1MD85_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22000 PE,86.07,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; OB_NTP_bind,Domain
of unknown function DU,CUFF.13110.1
(282 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 452 e-127
Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 438 e-123
Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 181 7e-46
Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 181 7e-46
Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:51... 177 1e-44
Medtr3g055020.1 | helicase associated domain protein | HC | chr3... 169 3e-42
Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 160 1e-39
Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 160 1e-39
Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 160 1e-39
Medtr1543s0010.1 | pre-mRNA-splicing factor ATP-dependent RNA he... 157 1e-38
Medtr3g054420.1 | flavin containing amine oxidase | HC | chr3:21... 156 2e-38
Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 152 3e-37
Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 148 7e-36
Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 141 7e-34
Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC | chr2:4... 137 1e-32
Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 132 3e-31
Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein |... 127 2e-29
Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC | chr7:3... 126 2e-29
Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 124 7e-29
Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 110 1e-24
Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 106 2e-23
Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA hel... 106 3e-23
Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC | c... 78 1e-14
Medtr1g056490.1 | ATP-dependent RNA helicase | HC | chr1:2472920... 75 5e-14
Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA hel... 74 2e-13
Medtr0267s0070.1 | NB-ARC domain disease resistance protein, put... 69 6e-12
Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC | c... 67 2e-11
Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein ... 65 1e-10
Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein ... 62 5e-10
Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein ... 62 5e-10
Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 61 1e-09
Medtr8g045110.1 | ATP-dependent RNA helicase A-like protein | HC... 59 4e-09
Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein ... 56 4e-08
Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein ... 56 4e-08
Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein ... 56 4e-08
Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein ... 56 4e-08
Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein ... 56 4e-08
Medtr1g010030.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 50 3e-06
>Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr2:42091662-42101447 | 20130731
Length = 1269
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 211/263 (80%), Positives = 227/263 (86%)
Query: 1 MVDFXXXXXXXXXXXXGEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE 60
MV+F GE+LGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERF VPE
Sbjct: 990 MVEFPLDPPLAKMLLMGERLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFFVPE 1049
Query: 61 SDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPD 120
SDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILK L IPLTTCFPD
Sbjct: 1050 SDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTTCFPD 1109
Query: 121 TDIVRKAVCSAYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLT 180
TD+VRKA+CSAYFHNSAR KGV EY+N R+GMPCHLHPSSALYGMGCTP+YVVYHEL+LT
Sbjct: 1110 TDVVRKAICSAYFHNSARLKGVGEYVNTRNGMPCHLHPSSALYGMGCTPDYVVYHELILT 1169
Query: 181 SKEYMQCTTAVEPQWLAELGPMFFSIKESDTSLLEHKKKQNQEKTSMEEEMENLEKVQAX 240
+KEYMQC TAVEPQW+AELGPMFFS+KESDTSLLEHKKKQ +EKT+MEEEMENL+K QA
Sbjct: 1170 TKEYMQCATAVEPQWMAELGPMFFSVKESDTSLLEHKKKQKREKTAMEEEMENLKKEQAE 1229
Query: 241 XXXXXXXXXXXXMAQHQQQISMP 263
A+ QQQIS+P
Sbjct: 1230 LERENKRKEKEKRAKSQQQISIP 1252
>Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA helicase
PRP16 | HC | chr3:21592985-21589785 | 20130731
Length = 1066
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 203/263 (77%), Positives = 224/263 (85%)
Query: 1 MVDFXXXXXXXXXXXXGEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE 60
MV+F GE+ GCLEEVLTIVSMLSVPSVFFRPKDRA ESDAARERF VPE
Sbjct: 787 MVEFPLDPPLAKMLLMGEQFGCLEEVLTIVSMLSVPSVFFRPKDRAAESDAARERFFVPE 846
Query: 61 SDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPD 120
SDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILK L IPLTTCFPD
Sbjct: 847 SDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPLTTCFPD 906
Query: 121 TDIVRKAVCSAYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLT 180
TD+VRKA+CSAYFHNSAR GV EY+N R+GMPC+LHPSSALYGMGCTPEYVVYHEL+LT
Sbjct: 907 TDVVRKAICSAYFHNSARLMGVGEYVNTRNGMPCYLHPSSALYGMGCTPEYVVYHELILT 966
Query: 181 SKEYMQCTTAVEPQWLAELGPMFFSIKESDTSLLEHKKKQNQEKTSMEEEMENLEKVQAX 240
+KEYMQC TAVEP+W+AELGPMFFS+ ESDTSL+EHKKKQ +EKT++EEE+ENL+K QA
Sbjct: 967 TKEYMQCATAVEPKWMAELGPMFFSVTESDTSLMEHKKKQKREKTAIEEEVENLKKEQAK 1026
Query: 241 XXXXXXXXXXXXMAQHQQQISMP 263
A++QQQIS+P
Sbjct: 1027 FERENKRKEIEKRAKNQQQISIP 1049
>Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 131/203 (64%), Gaps = 4/203 (1%)
Query: 20 LGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDYR 79
LGC +E+LTI++M+ ++F+RP+++ ++D R RF PE DHLTL VY+ WK ++
Sbjct: 1004 LGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFS 1063
Query: 80 GDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHNSARS 139
G WC ++F+ + LR+A++VR QLL I+ K + + + + +RKA+ + +F ++AR
Sbjct: 1064 GPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARK 1123
Query: 140 KGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQWLAEL 199
Y P ++HPSSAL+ P++V+YHELV+T+KEYM+ T ++P+WL EL
Sbjct: 1124 DPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHELVMTTKEYMREVTVIDPKWLVEL 1181
Query: 200 GPMFFSIKESDTSLLEHKKKQNQ 222
P FF + +D + + +K+Q +
Sbjct: 1182 APRFFKV--ADPTKMSKRKRQER 1202
>Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 131/203 (64%), Gaps = 4/203 (1%)
Query: 20 LGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDYR 79
LGC +E+LTI++M+ ++F+RP+++ ++D R RF PE DHLTL VY+ WK ++
Sbjct: 1004 LGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRARFFQPEGDHLTLLAVYESWKNKNFS 1063
Query: 80 GDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHNSARS 139
G WC ++F+ + LR+A++VR QLL I+ K + + + + +RKA+ + +F ++AR
Sbjct: 1064 GPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARK 1123
Query: 140 KGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQWLAEL 199
Y P ++HPSSAL+ P++V+YHELV+T+KEYM+ T ++P+WL EL
Sbjct: 1124 DPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHELVMTTKEYMREVTVIDPKWLVEL 1181
Query: 200 GPMFFSIKESDTSLLEHKKKQNQ 222
P FF + +D + + +K+Q +
Sbjct: 1182 APRFFKV--ADPTKMSKRKRQER 1202
>Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:51667204-51673502 | 20130731
Length = 1154
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 130/203 (64%), Gaps = 4/203 (1%)
Query: 20 LGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDYR 79
LGC +E+LTI++M+ ++F+RP+++ ++D + RF E DHLTL VY+ WK ++
Sbjct: 935 LGCSDEILTIIAMIQTGNIFYRPREKQAQADQKKARFFQAEGDHLTLLAVYESWKSKNFS 994
Query: 80 GDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHNSARS 139
G WC ++F+ + LR+A++VR QLL I+ K + + + + +RKA+ + +F ++AR
Sbjct: 995 GPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDIVSAGKNFSKIRKAITAGFFFHAARK 1054
Query: 140 KGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQWLAEL 199
Y P ++HPSSAL+ P++V+YHELV+T+KEYM+ T ++P+WL EL
Sbjct: 1055 DPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHELVMTTKEYMREVTVIDPKWLVEL 1112
Query: 200 GPMFFSIKESDTSLLEHKKKQNQ 222
P FF + +D + + +K+Q +
Sbjct: 1113 APRFFKV--ADPTKMSKRKRQER 1133
>Medtr3g055020.1 | helicase associated domain protein | HC |
chr3:21626884-21623913 | 20130731
Length = 445
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/98 (81%), Positives = 81/98 (82%)
Query: 1 MVDFXXXXXXXXXXXXGEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE 60
MV+F GE GCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERF VPE
Sbjct: 164 MVEFPLDPPLAKMLLMGEHFGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFFVPE 223
Query: 61 SDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKARE 98
SDHLTLYNVYQQWKQH YRGDWCNDHFL VKGLRKARE
Sbjct: 224 SDHLTLYNVYQQWKQHYYRGDWCNDHFLQVKGLRKARE 261
>Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 18 EKLGCLEEVLTIVSMLSVP-SVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
EK C E++++I +MLS+ S+F+RPKD+ +D AR F DH+ L VY WK+
Sbjct: 844 EKYKCSEDIISIAAMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGDHMALLKVYNSWKE 903
Query: 76 HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHN 135
+Y WC ++++ V+ +++AR++R QL +L+++ I LTT D D ++K++ S +F +
Sbjct: 904 TNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEIELTTNPNDLDAIKKSITSGFFPH 963
Query: 136 SARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQW 195
S++ + Y + G H+HPSS L P++VVYHELVLT+KEYM+ T ++ +W
Sbjct: 964 SSKLQKNGSYRTLKHGQTVHIHPSSGL--AQVLPKWVVYHELVLTTKEYMRQITELKAEW 1021
Query: 196 LAELGPMFFSIKE 208
L E+ P ++ +K+
Sbjct: 1022 LLEIAPHYYQLKD 1034
>Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 18 EKLGCLEEVLTIVSMLSVP-SVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
EK C E++++I +MLS+ S+F+RPKD+ +D AR F DH+ L VY WK+
Sbjct: 844 EKYKCSEDIISIAAMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGDHMALLKVYNSWKE 903
Query: 76 HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHN 135
+Y WC ++++ V+ +++AR++R QL +L+++ I LTT D D ++K++ S +F +
Sbjct: 904 TNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEIELTTNPNDLDAIKKSITSGFFPH 963
Query: 136 SARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQW 195
S++ + Y + G H+HPSS L P++VVYHELVLT+KEYM+ T ++ +W
Sbjct: 964 SSKLQKNGSYRTLKHGQTVHIHPSSGL--AQVLPKWVVYHELVLTTKEYMRQITELKAEW 1021
Query: 196 LAELGPMFFSIKE 208
L E+ P ++ +K+
Sbjct: 1022 LLEIAPHYYQLKD 1034
>Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA helicase
| HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 18 EKLGCLEEVLTIVSMLSVP-SVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
EK C E++++I +MLS+ S+F+RPKD+ +D AR F DH+ L VY WK+
Sbjct: 844 EKYKCSEDIISIAAMLSIGNSIFYRPKDKQVHADNARLNFHTGNVGDHMALLKVYNSWKE 903
Query: 76 HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHN 135
+Y WC ++++ V+ +++AR++R QL +L+++ I LTT D D ++K++ S +F +
Sbjct: 904 TNYSTQWCYENYIQVRSMKRARDIRDQLAGLLERVEIELTTNPNDLDAIKKSITSGFFPH 963
Query: 136 SARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQW 195
S++ + Y + G H+HPSS L P++VVYHELVLT+KEYM+ T ++ +W
Sbjct: 964 SSKLQKNGSYRTLKHGQTVHIHPSSGL--AQVLPKWVVYHELVLTTKEYMRQITELKAEW 1021
Query: 196 LAELGPMFFSIKE 208
L E+ P ++ +K+
Sbjct: 1022 LLEIAPHYYQLKD 1034
>Medtr1543s0010.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 | HC | scaffold1543:1149-130 | 20130731
Length = 304
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 74/91 (81%)
Query: 1 MVDFXXXXXXXXXXXXGEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE 60
MV+F GE GCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERF VPE
Sbjct: 188 MVEFPLDPPLAKMLLMGEHFGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFFVPE 247
Query: 61 SDHLTLYNVYQQWKQHDYRGDWCNDHFLHVK 91
SDHLTLYNVYQQWKQHDYRGDWCNDHF +K
Sbjct: 248 SDHLTLYNVYQQWKQHDYRGDWCNDHFFKLK 278
>Medtr3g054420.1 | flavin containing amine oxidase | HC |
chr3:21598634-21597527 | 20130731
Length = 283
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/118 (69%), Positives = 89/118 (75%), Gaps = 11/118 (9%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQH 76
GE GCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERF VPESDHLTLYNVYQQWKQH
Sbjct: 5 GEHFGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFFVPESDHLTLYNVYQQWKQH 64
Query: 77 DYRGDWCNDHFLHVKGLRKAREVRSQLLDILK-KLNIPLTTCFPDTDIVRKAVCSAYF 133
DYR VKGLRKAREV SQLLDIL ++ + + D DI+ + V + F
Sbjct: 65 DYR----------VKGLRKAREVMSQLLDILMVHTHVSVQSSGNDYDILAENVGNRLF 112
>Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 904
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 18 EKLGCLEEVLTIVSMLSVP-SVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
EK C +E+++I +MLSV S+F+ PK++ +D AR F DH+ NVY WK+
Sbjct: 689 EKYKCSDEIISIAAMLSVGGSIFYSPKNKKVHADNARMNFHTGNVGDHIAHLNVYNSWKE 748
Query: 76 HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHN 135
+Y WC ++++ V+ +++A+++R QL+ +L+++ I LT+ D D ++K++ S +F N
Sbjct: 749 SNYSRQWCYENYIQVRSMKRAKDIRDQLVGLLERIEIELTSNSNDLDAIKKSITSGFFPN 808
Query: 136 SARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQW 195
+A+ + Y + H+HPSS L P V+YHELVLT+KEY++ T ++P+W
Sbjct: 809 TAKLQKYGTYQMVKRLQTGHIHPSSGL--AEVFPRLVLYHELVLTTKEYLRQVTEIKPEW 866
Query: 196 LAELGPMFFSIKE 208
L E+ P F++ K+
Sbjct: 867 LLEIAPNFYNPKD 879
>Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr5:31994096-31996650 | 20130731
Length = 808
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 121/198 (61%), Gaps = 6/198 (3%)
Query: 18 EKLGCLEEVLTIVSMLSVP-SVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
EK C +E+++I +MLSV S+F+RP+D+ +D AR F + DH+ V+ WK+
Sbjct: 601 EKYKCSDEIISIAAMLSVGNSIFYRPRDKQVHADNARMNFHTGDVGDHIAHLKVFNSWKE 660
Query: 76 HDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHN 135
+Y WC ++++ V+ +++AR++R QL +L+++ I LT+ + D +RK++ S +F N
Sbjct: 661 ANYSTQWCFENYVQVRSMKRARDIRDQLAGLLERVEIELTSNPNNLDAIRKSILSGFFPN 720
Query: 136 SARSKGVREYINCRSGMPCHLHPSSALYGMG-CTPEYVVYHELVLTSKEYMQCTTAVEPQ 194
SA+ + Y + H+HPSS GM P V+YHELVLT+KEYM+ T ++P+
Sbjct: 721 SAKLQKDGTYRRFKHLQTVHIHPSS---GMAEVIPRLVLYHELVLTTKEYMRQVTEIKPE 777
Query: 195 WLAELGPMFFSIKESDTS 212
WL E+ P + K+ S
Sbjct: 778 WLLEIAPHCYDPKDVGDS 795
>Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr1:38781865-38776805 | 20130731
Length = 721
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 123/215 (57%), Gaps = 12/215 (5%)
Query: 19 KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDY 78
+ C E+L+I +MLSVP+ F RP++ + +D A+ RF + DHLTL NVY +KQ++
Sbjct: 503 EFNCSNEILSISAMLSVPNCFIRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNE 562
Query: 79 RGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPL-TTCFPDTDI---VRKAVCSAYFH 134
WC D+F++ + L+ A VR QL+ I+ + N+ L +T F D +RKA+ + YF
Sbjct: 563 DASWCYDNFVNNRALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKAMLAGYFM 622
Query: 135 NSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQ 194
A + Y+ + HLHPS+ L PE+V+Y+E VLTS+ +++ T + +
Sbjct: 623 QVAHLERTGHYLTVKDNQVVHLHPSNCL---DHKPEWVIYNEYVLTSRNFIRTVTDIRGE 679
Query: 195 WLAELGPMFFSIK-----ESDTSLLEHKKKQNQEK 224
WL ++ P ++ + E+ L + KK+ +EK
Sbjct: 680 WLVDIAPHYYDLSNFPQCEAKRVLEKLYKKREKEK 714
>Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC |
chr2:4513881-4525364 | 20130731
Length = 701
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 114/195 (58%), Gaps = 5/195 (2%)
Query: 19 KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDY 78
+LGC EE++TI + LSV S++ + +ESD A+ RF+ E DH+T NVY+ + Q
Sbjct: 506 QLGCSEEIITIAAALSVQSIWISGRGIQKESDEAKLRFAAAEGDHVTFLNVYKGFHQSRK 565
Query: 79 RGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDIVRKAVCSAYFHNSAR 138
WC+ +F++ ++K EVR QL I +++ + L +C D +V+KAV + +F N+ R
Sbjct: 566 SSQWCHKNFVNYHAMKKVLEVREQLRRIAQRIGLVLKSCESDMQVVKKAVIAGFFANACR 625
Query: 139 SKGVRE---YINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQW 195
+ Y R ++HPSS L+ + P++V+++ LV T ++YM+ ++P W
Sbjct: 626 LEPYSPDGMYKTLRGSEEVYIHPSSVLFRV--NPKWVIFNSLVSTDRKYMRNVMTIDPSW 683
Query: 196 LAELGPMFFSIKESD 210
L E P F+ +++ +
Sbjct: 684 LLEAAPHFYKLQQPN 698
>Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr4:33389635-33387508 | 20130731
Length = 683
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 119/215 (55%), Gaps = 12/215 (5%)
Query: 19 KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDY 78
+ C E+L+I +M++VP+ F RP+D E +D A+ RF+ + DHLTL NVY +KQ++
Sbjct: 465 EFNCSNEILSISAMVAVPNCFIRPRDAQEAADEAKARFAHIDGDHLTLLNVYHAYKQNNE 524
Query: 79 RGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPL-TTCFPDTDI---VRKAVCSAYFH 134
WC ++F++ + L+ A VR QL+ I+ + N+ L +T F D ++KA+ + YF
Sbjct: 525 DPSWCYENFVNHRALKSADNVRQQLVRIMARFNLKLCSTYFNSRDYYVNIKKAMLAGYFM 584
Query: 135 NSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAVEPQ 194
A + Y+ + LHPS+ L PE+V+Y+E V TS +++ T +
Sbjct: 585 QVAHLERTGHYLTVKDNQMVQLHPSNCL---DPKPEWVIYNEYVFTSDNFIRTVTDIRGD 641
Query: 195 WLAELGPMFFSIK-----ESDTSLLEHKKKQNQEK 224
WL ++ P ++ + E+ L KK+ +EK
Sbjct: 642 WLVDIAPNYYDLSNFPRCEAKQVLDRLYKKREKEK 676
>Medtr4g094992.1 | ATP-dependent RNA helicase dhx8-like protein | HC
| chr4:39455746-39462206 | 20130731
Length = 519
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 116/206 (56%), Gaps = 18/206 (8%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQW--- 73
+ CLEE+L V+MLS S+F+ P+D+ EE+ A + F+ PE DH+TL NV++
Sbjct: 316 ASQFNCLEEMLIAVAMLSAESIFYFPRDKYEEARTAAKSFASPEGDHITLINVFRAATDL 375
Query: 74 ------------KQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDT 121
+ D+R WC ++F++ + LR AR++ Q+ ++++ + L +C D
Sbjct: 376 LEKRTIEINKMKNEKDFR-KWCKENFINSRSLRHARDIHRQIQGHVQQMGLKLASCGEDM 434
Query: 122 DIVRKAVCSAYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTS 181
R+ + +++F N+A + Y SG +HPSS L+ PE ++++EL+ T+
Sbjct: 435 LQFRRCLVASFFLNAAVKQPDGTYRALASGQVVQIHPSSVLFRK--KPECIIFNELIQTN 492
Query: 182 KEYMQCTTAVEPQWLAELGPMFFSIK 207
+Y++ T V+ WL EL P F++++
Sbjct: 493 NKYVRDLTRVDNLWLTELAPQFYAMQ 518
>Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC |
chr7:38011601-38003021 | 20130731
Length = 725
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 116/204 (56%), Gaps = 18/204 (8%)
Query: 19 KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQW----- 73
+ CLEE+L V+MLS S+F+ P+++ EE+ A + F+ PE DH+TL NVY+
Sbjct: 524 QFNCLEEMLIAVAMLSAESIFYFPREKYEEARTAAKSFASPEGDHITLINVYRAATDFLE 583
Query: 74 ----------KQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDI 123
+ D+R WC ++F++ + LR AR++ Q+ ++++ + L +C D
Sbjct: 584 KRTIETNKTKNEKDFR-KWCKENFINSRSLRHARDIHRQIQGHVQQMGLKLASCGEDMLQ 642
Query: 124 VRKAVCSAYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKE 183
R+ + +++F N+A + Y SG +HPSS L+ PE ++++EL+ T+ +
Sbjct: 643 FRRCLVASFFLNAAVKQPDGTYRALASGQVVQIHPSSVLFRK--KPECIIFNELIQTNNK 700
Query: 184 YMQCTTAVEPQWLAELGPMFFSIK 207
Y++ T V+ WL EL P F++++
Sbjct: 701 YVRDLTRVDNLWLTELAPQFYAMQ 724
>Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:20814127-20817509 | 20130731
Length = 715
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 107/192 (55%), Gaps = 12/192 (6%)
Query: 19 KLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQHDY 78
+ C E+L+I +MLSVP+ F RPK+ +D A+ RF + DHLTL NVY +KQ++
Sbjct: 526 EFNCSNEILSISAMLSVPNCFIRPKEAQIAADEAKARFIHVDGDHLTLLNVYHAYKQNNE 585
Query: 79 RGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTDI------VRKAVCSAY 132
WC D+F++ + L+ A VR QL+ I+ + N+ L C D + +RK + + Y
Sbjct: 586 DASWCYDNFINYRVLKSADNVRQQLVRIMARFNLKL--CSTDFNSRHYYVNIRKTMLAGY 643
Query: 133 FHNSARSKGVR-EYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTAV 191
F A R Y+ + +LHPS+ L PE+V+Y+E VLTS+ +++ +
Sbjct: 644 FMQVAHFDQQRGRYLTVKDKQEVYLHPSNCL---DHKPEWVIYNEYVLTSRHFIRTVMDI 700
Query: 192 EPQWLAELGPMF 203
+WL ++ P +
Sbjct: 701 RGEWLVDIAPHY 712
>Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr8:15840782-15843798 | 20130731
Length = 650
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 99/195 (50%), Gaps = 22/195 (11%)
Query: 1 MVDFXXXXXXXXXXXXGEKLGCLEEVLTIVSMLSVP-SVFFRPKDRAEESDAARERFSVP 59
M +F EK C +E+++I SMLSV S+F+RPKD+ +D AR F
Sbjct: 428 MAEFPLDPMLSKMIVASEKYKCSDEIISIASMLSVGNSIFYRPKDKQVHADNARMNFHTG 487
Query: 60 E-SDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCF 118
+ DH+ VY WKQ +Y WC ++++ V+ +++AR++R QLL +L K++I L +
Sbjct: 488 DVGDHIAHLKVYSTWKQANYSTRWCYENYIQVRSMKRARDIRDQLLGLLDKVDIELISNS 547
Query: 119 PDTDIVRKAVCSAYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMG-CTPEYVVYHEL 177
D + + Y + H+HPSS GM P V+YHEL
Sbjct: 548 NDLVLQKSGT----------------YRRVKHLQTVHIHPSS---GMAEVVPRLVLYHEL 588
Query: 178 VLTSKEYMQCTTAVE 192
VLT+KE M T +E
Sbjct: 589 VLTTKECMIPRTYIE 603
>Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490015-34479594 | 20130731
Length = 697
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 32/200 (16%)
Query: 21 GCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPES----DHLTLYNVYQQWKQH 76
GC+ E LT+ +MLS + P E R ++P+ DH+ L ++++W Q
Sbjct: 440 GCITEALTVAAMLSSETALL-PGQSKTEKKRKRPISNLPDGSGLGDHIQLLQIFERWHQT 498
Query: 77 DYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLN---IPLTTCFPDTDI------VRKA 127
DY WC DH L V+G+ AR+VR QL I++K+ + + T +I +RKA
Sbjct: 499 DYDIGWCKDHGLQVRGMSFARDVRKQLSQIMQKIAKEPLGIRTNGKGEEIRRDYRNLRKA 558
Query: 128 VCSAY---------FHNSARSKGVREYINCRSGMPCHLHPSSALYG--MGCTPEYVVYHE 176
+C Y HN R+ G + G +HPSSAL G P+YVVYHE
Sbjct: 559 LCVGYANQLAERKMHHNGYRTLGFQ-------GQVVQVHPSSALSSDEFGKFPDYVVYHE 611
Query: 177 LVLTSKEYMQCTTAVEPQWL 196
L+ T + +M+ +VE +W+
Sbjct: 612 LIATPRPFMRNVCSVEMKWV 631
>Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34489993-34479594 | 20130731
Length = 647
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 32/200 (16%)
Query: 21 GCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPES----DHLTLYNVYQQWKQH 76
GC+ E LT+ +MLS + P E R ++P+ DH+ L ++++W Q
Sbjct: 440 GCITEALTVAAMLSSETALL-PGQSKTEKKRKRPISNLPDGSGLGDHIQLLQIFERWHQT 498
Query: 77 DYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLN---IPLTTCFPDTDI------VRKA 127
DY WC DH L V+G+ AR+VR QL I++K+ + + T +I +RKA
Sbjct: 499 DYDIGWCKDHGLQVRGMSFARDVRKQLSQIMQKIAKEPLGIRTNGKGEEIRRDYRNLRKA 558
Query: 128 VCSAY---------FHNSARSKGVREYINCRSGMPCHLHPSSALYG--MGCTPEYVVYHE 176
+C Y HN R+ G + G +HPSSAL G P+YVVYHE
Sbjct: 559 LCVGYANQLAERKMHHNGYRTLGFQ-------GQVVQVHPSSALSSDEFGKFPDYVVYHE 611
Query: 177 LVLTSKEYMQCTTAVEPQWL 196
L+ T + +M+ +VE +W+
Sbjct: 612 LIATPRPFMRNVCSVEMKWV 631
>Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC |
chr3:39323283-39316838 | 20130731
Length = 1718
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 20 LGCL------EEVLTIVSMLSVPSVFFRPKDRAEE--SDAARERFSVPESDHLTLYNVYQ 71
LGC E ++ +M + ++F R + ++ SD + +F P+ D TL +VY+
Sbjct: 698 LGCFRLGLGREGIVLAATMPNASNIFCRFGNEGDKQRSDCLKVQFCHPDGDLFTLLSVYK 757
Query: 72 QWKQH--DYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNI----------PLTTCFP 119
+W+ D R WC ++ ++ K +R+ ++ +L L++ + P T
Sbjct: 758 EWEAQPRDRRNKWCWENSINAKCMRRCQDTVLELESFLEREHGFVVPSYWRWNPHTPSVH 817
Query: 120 DTDIVRKAVCSAYFHNSARSKGVRE-YINCRSGMPCHLHPSSALYGMGCTPEYVVYHELV 178
D ++ +K + S+ N A G + Y ++G LHPSS+L P +VV+ EL+
Sbjct: 818 DKNL-KKVILSSLAENVAMFSGRNQLYEVAQTGQHVQLHPSSSLLVFAQRPSWVVFGELL 876
Query: 179 LTSKEYMQCTTAVEPQWLAELG--PMFFSIKESDTSLLEHKKKQNQEKTSM 227
S EY+ C +AV+ Q L L P+F D S +E +K Q + T
Sbjct: 877 SVSNEYLVCVSAVDFQLLYSLQPPPLF------DVSKMEERKLQTKTLTGF 921
>Medtr1g056490.1 | ATP-dependent RNA helicase | HC |
chr1:24729204-24739293 | 20130731
Length = 999
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 15/199 (7%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSV-PESDHLTLYNVYQQWKQ 75
G CL LTI + L+ + F P +R +E+D A+ F+ SDHL L +++WK
Sbjct: 727 GSIFQCLSPALTIAASLAYRNPFVLPINRKKEADEAKRYFACDSRSDHLALVEAFEEWKD 786
Query: 76 HDYRGD---WCNDHFLHVKGLRKAREVRSQLLDILKKLNI--------PLTTCFPDTDIV 124
RGD +C ++FL LR ++R+Q L++L + D ++V
Sbjct: 787 AKSRGDEKNFCWENFLSPATLRLIDDMRTQFLNLLSDIGFVDKSKGVQAYNQQSHDLEMV 846
Query: 125 RKAVCSAYFHNSARSK--GVREYINCRSGMPCHLHPSSALYGMGCTP-EYVVYHELVLTS 181
+C+ + N + K G R + +HPSS G+ P Y+VY E V T+
Sbjct: 847 CAILCAGLYPNVVQCKRRGHRTAFYTKEAGKVDIHPSSVNAGVHSFPLPYLVYSEKVKTT 906
Query: 182 KEYMQCTTAVEPQWLAELG 200
Y++ +T + L G
Sbjct: 907 SIYIRDSTNISDYALLLFG 925
>Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490000-34479591 | 20130731
Length = 589
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 21 GCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPES----DHLTLYNVYQQWKQH 76
GC+ E LT+ +MLS + P E R ++P+ DH+ L ++++W Q
Sbjct: 440 GCITEALTVAAMLSSETALL-PGQSKTEKKRKRPISNLPDGSGLGDHIQLLQIFERWHQT 498
Query: 77 DYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLN---IPLTTCFPDTDI------VRKA 127
DY WC DH L V+G+ AR+VR QL I++K+ + + T +I +RKA
Sbjct: 499 DYDIGWCKDHGLQVRGMSFARDVRKQLSQIMQKIAKEPLGIRTNGKGEEIRRDYRNLRKA 558
Query: 128 VCSAYFHNSARSK 140
+C Y + A K
Sbjct: 559 LCVGYANQLAERK 571
>Medtr0267s0070.1 | NB-ARC domain disease resistance protein, putative
| LC | scaffold0267:17737-24509 | 20130731
Length = 1982
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 31/227 (13%)
Query: 20 LGCLE-----EVLTIVSMLS-VPSVFFR--PKDRAEESDAARERFSVPESDHLTLYNVYQ 71
LGC + E + + +M++ SVF R +D ++SD + +F E D TL +VY
Sbjct: 1352 LGCFQYTLGREGIALAAMMANARSVFCRVGNEDDKQKSDCQKVQFCHCEGDLFTLLSVYM 1411
Query: 72 QW--KQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILK-KLNI---------PLTTCFP 119
+W + +++ WC ++ ++ K +R+ + +L L+ +L + P
Sbjct: 1412 EWEVQPQNWKNKWCWENSINAKSMRRCQNTFLELESCLESELGLVVPSYWRWDPHNPSIH 1471
Query: 120 DTDIVRKAVCSAYFHNSARSKGVRE--YINCRSGMPCHLHPSSALYGMGCTPEYVVYHEL 177
D ++ +KA+ S+ N A G + YI ++ LHPS +L P +VV++EL
Sbjct: 1472 DKNM-KKAILSSLSENVAMYSGRNQLGYIVAQTEKHVQLHPSCSLLVFSQRPSWVVFYEL 1530
Query: 178 VLTSKEYMQCTTAVEPQWLAELG--PMFFSIKESDTSLLEHKKKQNQ 222
S EY+ C +AV+ Q L L P+F D S +E +K Q +
Sbjct: 1531 SSESNEYLFCVSAVDFQSLYSLKPPPLF------DVSKMEEQKLQTK 1571
>Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC |
chr3:3875260-3882505 | 20130731
Length = 1731
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 31/227 (13%)
Query: 20 LGCLE-----EVLTIVSMLS-VPSVFFRPKDRAEE--SDAARERFSVPESDHLTLYNVYQ 71
LGC + E + + +M++ SVF R + ++ SD + +F E D TL +VY
Sbjct: 697 LGCFQYTLGREGIALAAMMANARSVFCRVGNEGDKQKSDCQKVQFCHCEGDLFTLLSVYM 756
Query: 72 QW--KQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILK-KLNI---------PLTTCFP 119
+W + +++ WC ++ ++ K +R+ + +L L+ +L + P
Sbjct: 757 EWEVQPQNWKNKWCWENSINAKSMRRCQNTFLELESCLESELGLVVPSYWRWDPHNPSIH 816
Query: 120 DTDIVRKAVCSAYFHNSARSKGVRE--YINCRSGMPCHLHPSSALYGMGCTPEYVVYHEL 177
D ++ +KA+ S+ N A G + YI ++ LHPS +L P +VV++EL
Sbjct: 817 DKNM-KKAILSSLSENVAMYSGRNQLGYIVAQTEKHVQLHPSCSLLVFSQRPSWVVFYEL 875
Query: 178 VLTSKEYMQCTTAVEPQWLAELG--PMFFSIKESDTSLLEHKKKQNQ 222
S EY+ C +AV+ Q L L P+F D S +E +K Q +
Sbjct: 876 RSESNEYLFCVSAVDFQSLYSLKPPPLF------DVSKMEEQKLQTK 916
>Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:16995201-16976389 | 20130731
Length = 1148
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 10/127 (7%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
G C + VLTIV+ LSV F P+D+ + + A+ RFS + SDH+ L Y+ WK
Sbjct: 750 GAIFRCFDPVLTIVAGLSVRDPFLLPQDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKD 809
Query: 76 HDYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDT------DIVRK 126
+ G ++C +FL + L+ +R Q ILK+ + T + +VR
Sbjct: 810 AEREGSAYEYCWRNFLSAQTLQAIHSLRKQFSFILKEAGLVDTDASINNKLSHNQSLVRA 869
Query: 127 AVCSAYF 133
+CS F
Sbjct: 870 VICSGLF 876
>Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360105 | 20130731
Length = 1248
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQH 76
G CL+ +LT+V+ LSV F P D+ + ++AA+ +++ SDHL L Y WK+
Sbjct: 829 GAIFNCLDPILTVVAGLSVRDPFLSPLDKKDLAEAAKSQYTGAYSDHLALVRAYAGWKEA 888
Query: 77 --DYRG-DWCNDHFLHVKGLRKAREVRSQLLDILKKLNI---PLTTCFP---DTDIVRKA 127
D G ++C +FL + ++ +R + + +L + + T+C D +++R
Sbjct: 889 EIDLVGYEYCWKNFLSFQSMKAIDALRREFIGLLTDIGLVDSNTTSCDTWSYDVNLIRAV 948
Query: 128 VCSAYF 133
+C +
Sbjct: 949 ICYGLY 954
>Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360401 | 20130731
Length = 1222
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPESDHLTLYNVYQQWKQH 76
G CL+ +LT+V+ LSV F P D+ + ++AA+ +++ SDHL L Y WK+
Sbjct: 829 GAIFNCLDPILTVVAGLSVRDPFLSPLDKKDLAEAAKSQYTGAYSDHLALVRAYAGWKEA 888
Query: 77 --DYRG-DWCNDHFLHVKGLRKAREVRSQLLDILKKLNI---PLTTCFP---DTDIVRKA 127
D G ++C +FL + ++ +R + + +L + + T+C D +++R
Sbjct: 889 EIDLVGYEYCWKNFLSFQSMKAIDALRREFIGLLTDIGLVDSNTTSCDTWSYDVNLIRAV 948
Query: 128 VCSAYF 133
+C +
Sbjct: 949 ICYGLY 954
>Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 768
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 18 EKLGCLEEVLTIVSMLSVP-SVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
EK C +E+++I +MLSV S+F+ PK++ +D AR F DH+ NVY WK+
Sbjct: 689 EKYKCSDEIISIAAMLSVGGSIFYSPKNKKVHADNARMNFHTGNVGDHIAHLNVYNSWKE 748
Query: 76 HDYRGDWCNDHFLHV 90
+Y WC ++++ +
Sbjct: 749 SNYSRQWCYENYIQM 763
>Medtr8g045110.1 | ATP-dependent RNA helicase A-like protein | HC |
chr8:17594404-17602720 | 20130731
Length = 630
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWK- 74
G C + VLTIVS+LSV F +D++E A+ RFS + SDH+ Y+ WK
Sbjct: 337 GAIFRCFDPVLTIVSVLSVRDPFLMLQDKSELK-RAKSRFSANDYSDHMVFVRAYEGWKD 395
Query: 75 ----QHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLT------TCFPDTDIV 124
+ DY ++C +FL + L + +R QL ILK+ + T D +V
Sbjct: 396 AKRERSDY--NYCWRNFLSSQTLHEIHSIRKQLSSILKETGLLDTDASINNNLSIDQSLV 453
Query: 125 RKAVCSAYF 133
R +CS F
Sbjct: 454 RAVICSGLF 462
>Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
G CL+ +LT+V+ LSV F P D+ + +++A+ + + SDHL L Y WK
Sbjct: 775 GAIFNCLDPILTVVAGLSVRDPFVVPADKKDLAESAKAQIAARGYSDHLALVRAYDGWKD 834
Query: 76 HDYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTD--------IV 124
+ + ++C +FL + LR +R Q +LK +I L +T+ ++
Sbjct: 835 AEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLK--DIGLVGNNSETNNKWSNEEHLL 892
Query: 125 RKAVCSAYFHNSARSKGVREYINCRSGMPCH--------LHPSSALYGMGCTP-EYVVYH 175
R +C+ F G+ +N + L+ +S + P ++V++
Sbjct: 893 RAVICAGLF------PGISSVVNKEKSISLKTMEDGQVLLYANSVNGSVAKIPYPWIVFN 946
Query: 176 ELVLTSKEYMQCTTAVEPQWLAELG 200
E + + +++ +T + L G
Sbjct: 947 EKIKVNTVFLRDSTGISDSMLLLFG 971
>Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
G CL+ +LT+V+ LSV F P D+ + +++A+ + + SDHL L Y WK
Sbjct: 775 GAIFNCLDPILTVVAGLSVRDPFVVPADKKDLAESAKAQIAARGYSDHLALVRAYDGWKD 834
Query: 76 HDYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTD--------IV 124
+ + ++C +FL + LR +R Q +LK +I L +T+ ++
Sbjct: 835 AEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLK--DIGLVGNNSETNNKWSNEEHLL 892
Query: 125 RKAVCSAYFHNSARSKGVREYINCRSGMPCH--------LHPSSALYGMGCTP-EYVVYH 175
R +C+ F G+ +N + L+ +S + P ++V++
Sbjct: 893 RAVICAGLF------PGISSVVNKEKSISLKTMEDGQVLLYANSVNGSVAKIPYPWIVFN 946
Query: 176 ELVLTSKEYMQCTTAVEPQWLAELG 200
E + + +++ +T + L G
Sbjct: 947 EKIKVNTVFLRDSTGISDSMLLLFG 971
>Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
G CL+ +LT+V+ LSV F P D+ + +++A+ + + SDHL L Y WK
Sbjct: 775 GAIFNCLDPILTVVAGLSVRDPFVVPADKKDLAESAKAQIAARGYSDHLALVRAYDGWKD 834
Query: 76 HDYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTD--------IV 124
+ + ++C +FL + LR +R Q +LK +I L +T+ ++
Sbjct: 835 AEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLK--DIGLVGNNSETNNKWSNEEHLL 892
Query: 125 RKAVCSAYFHNSARSKGVREYINCRSGMPCH--------LHPSSALYGMGCTP-EYVVYH 175
R +C+ F G+ +N + L+ +S + P ++V++
Sbjct: 893 RAVICAGLF------PGISSVVNKEKSISLKTMEDGQVLLYANSVNGSVAKIPYPWIVFN 946
Query: 176 ELVLTSKEYMQCTTAVEPQWLAELG 200
E + + +++ +T + L G
Sbjct: 947 EKIKVNTVFLRDSTGISDSMLLLFG 971
>Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
G CL+ +LT+V+ LSV F P D+ + +++A+ + + SDHL L Y WK
Sbjct: 775 GAIFNCLDPILTVVAGLSVRDPFVVPADKKDLAESAKAQIAARGYSDHLALVRAYDGWKD 834
Query: 76 HDYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTD--------IV 124
+ + ++C +FL + LR +R Q +LK +I L +T+ ++
Sbjct: 835 AEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLK--DIGLVGNNSETNNKWSNEEHLL 892
Query: 125 RKAVCSAYFHNSARSKGVREYINCRSGMPCH--------LHPSSALYGMGCTP-EYVVYH 175
R +C+ F G+ +N + L+ +S + P ++V++
Sbjct: 893 RAVICAGLF------PGISSVVNKEKSISLKTMEDGQVLLYANSVNGSVAKIPYPWIVFN 946
Query: 176 ELVLTSKEYMQCTTAVEPQWLAELG 200
E + + +++ +T + L G
Sbjct: 947 EKIKVNTVFLRDSTGISDSMLLLFG 971
>Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 17 GEKLGCLEEVLTIVSMLSVPSVFFRPKDRAEESDAARERFSVPE-SDHLTLYNVYQQWKQ 75
G CL+ +LT+V+ LSV F P D+ + +++A+ + + SDHL L Y WK
Sbjct: 775 GAIFNCLDPILTVVAGLSVRDPFVVPADKKDLAESAKAQIAARGYSDHLALVRAYDGWKD 834
Query: 76 HDYRG---DWCNDHFLHVKGLRKAREVRSQLLDILKKLNIPLTTCFPDTD--------IV 124
+ + ++C +FL + LR +R Q +LK +I L +T+ ++
Sbjct: 835 AEAQQAGYEFCWRNFLSSQTLRAIDSLRKQFFHLLK--DIGLVGNNSETNNKWSNEEHLL 892
Query: 125 RKAVCSAYFHNSARSKGVREYINCRSGMPCH--------LHPSSALYGMGCTP-EYVVYH 175
R +C+ F G+ +N + L+ +S + P ++V++
Sbjct: 893 RAVICAGLF------PGISSVVNKEKSISLKTMEDGQVLLYANSVNGSVAKIPYPWIVFN 946
Query: 176 ELVLTSKEYMQCTTAVEPQWLAELG 200
E + + +++ +T + L G
Sbjct: 947 EKIKVNTVFLRDSTGISDSMLLLFG 971
>Medtr1g010030.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase DHX16, putative | HC | chr1:1700852-1690934 |
20130731
Length = 516
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 131 AYFHNSARSKGVREYINCRSGMPCHLHPSSALYGMGCTPEYVVYHELVLTSKEYMQCTTA 190
+F ++A+ + Y + +HPSS L P VVYHELVLT+KEYM+ T
Sbjct: 424 GFFPHTAKLQKNGSYWTLKHVQTVDIHPSSGL--AQVRPRCVVYHELVLTTKEYMRQITE 481
Query: 191 VEPQWL 196
++ QWL
Sbjct: 482 LKSQWL 487