Miyakogusa Predicted Gene

Lj0g3v0204399.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0204399.1 Non Characterized Hit- tr|F6HA19|F6HA19_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,80.77,1e-16,
,CUFF.13043.1
         (52 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g089900.1 | regulator of chromosome condensation (RCC1) fa...   100   2e-22

>Medtr5g089900.1 | regulator of chromosome condensation (RCC1)
           family protein | HC | chr5:39105074-39114126 | 20130731
          Length = 1117

 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/52 (92%), Positives = 51/52 (98%)

Query: 1   MVDKDDKFDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNG 52
           ++DKDDK D+RSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNG
Sbjct: 762 LIDKDDKLDTRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNG 813