Miyakogusa Predicted Gene

Lj0g3v0203509.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0203509.1 Non Characterized Hit- tr|A2ZTJ0|A2ZTJ0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,66.67,4e-16,seg,NULL; TRNASYNTHTYR,Tyrosine-tRNA ligase;
SUBFAMILY NOT NAMED,NULL; TYROSYL-TRNA SYNTHETASE,Tyros,CUFF.12966.1
         (502 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g466250.1 | tyrosyl-tRNA synthetase | HC | chr3:27231447-2...   862   0.0  
Medtr4g121070.1 | tyrosyl-tRNA synthetase | HC | chr4:50128516-5...   850   0.0  

>Medtr3g466250.1 | tyrosyl-tRNA synthetase | HC |
           chr3:27231447-27233269 | 20130731
          Length = 500

 Score =  862 bits (2227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/504 (84%), Positives = 453/504 (89%), Gaps = 6/504 (1%)

Query: 1   MATNFASRTILSSHSTKLFILPFKPP--SSHASFSIPFCFTRTTCTLQPLXXXXXXXXXX 58
           MATNFASR+I  SHS K    PF PP   SH  FS+P  FTRTTCTLQ            
Sbjct: 1   MATNFASRSIFFSHSIKHPFFPFTPPLSYSHLPFSLPLRFTRTTCTLQHQHHQQPQTT-- 58

Query: 59  HGRSVIGILEQRGLLESITSDALRTASSNAIDAPLKVYCGFDPTAESLHLGNLLGIIVLS 118
             R+VI ILE+RGLL+S+T+D+LR+ SSN I+APLKVYCGFDPTAESLHLGNLLG+IVLS
Sbjct: 59  --RNVIRILEERGLLDSLTNDSLRSISSNTINAPLKVYCGFDPTAESLHLGNLLGLIVLS 116

Query: 119 WFRRCGHNVVALIGGATARVGDPSGKSLERPELDVETLERNTAGIENTIRTILGRAQNLN 178
           WFRR GHNVVALIGGATARVGDPSGK++ERP+LD ETLERNT GIENTIRTILGR+QN N
Sbjct: 117 WFRRSGHNVVALIGGATARVGDPSGKNIERPQLDGETLERNTVGIENTIRTILGRSQNPN 176

Query: 179 LEELSVGDGNLCDSSVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRLDSEQ 238
            +EL+V     CD SVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRL+SEQ
Sbjct: 177 FKELNVNGNEFCDDSVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRLESEQ 236

Query: 239 GMSYTEFTYQLLQGYDFLHLFQNEGVTVQIGGSDQWGNITAGTELVRKILQVESAVYGFT 298
           GMSYTEFTYQLLQGYDFLHLFQNEGV VQIGGSDQWGNITAGTEL+RKILQVE   YG T
Sbjct: 237 GMSYTEFTYQLLQGYDFLHLFQNEGVNVQIGGSDQWGNITAGTELIRKILQVEGGTYGLT 296

Query: 299 FPLLLKSDGTKFGKSEDGAIWLSPSLLSPYKFYQYFFSVPDADVVRFLKILTFLDIEEIV 358
           FPLLLKSDGTKFGKSEDGAIWLSPS+LSPYKFYQYFFSVPDADVVRFLKILTFLDI+EIV
Sbjct: 297 FPLLLKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLKILTFLDIDEIV 356

Query: 359 KLEEEMVKPGYVPNTAQRRLAEEVTRFVHGEDGLKEALRATEALRPGSETKLDWKTIEGI 418
           KLEEE+ KPGYVPNTAQRRLAEEVT+FVHGEDGL EALRATEALRPGSETKLDWKTIEGI
Sbjct: 357 KLEEEIKKPGYVPNTAQRRLAEEVTKFVHGEDGLNEALRATEALRPGSETKLDWKTIEGI 416

Query: 419 AEDVPSCSLAYDEVLNQSLVDLSVSSGLFDSKSSARRLLKQGGLYLNNSRVNSENKKIEA 478
           AEDVPSCSLAYD+VLNQSLVDLSVSSGLFDSKS+ARRLLKQGG+YLNNSRV+SENK+IE 
Sbjct: 417 AEDVPSCSLAYDDVLNQSLVDLSVSSGLFDSKSAARRLLKQGGVYLNNSRVDSENKRIEV 476

Query: 479 ADIVDGKVLLLSAGKKNKVLVRIA 502
           ADIVDGKVLLLSAGKKNKVLVRIA
Sbjct: 477 ADIVDGKVLLLSAGKKNKVLVRIA 500


>Medtr4g121070.1 | tyrosyl-tRNA synthetase | HC |
           chr4:50128516-50126504 | 20130731
          Length = 482

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/502 (84%), Positives = 452/502 (90%), Gaps = 20/502 (3%)

Query: 1   MATNFASRTILSSHSTKLFILPFKPPSSHASFSIPFCFTRTTCTLQPLXXXXXXXXXXHG 60
           MATNFASR+I  SHS KLFI PFKPP S +S  +PF  +RTTCTLQ              
Sbjct: 1   MATNFASRSIFFSHSAKLFIFPFKPPLSSSS-RLPF--SRTTCTLQ----------HQQP 47

Query: 61  RSVIGILEQRGLLESITSDALRTASSNAIDAPLKVYCGFDPTAESLHLGNLLGIIVLSWF 120
            +VIGILEQRGLL+SIT+++LRT SSN I+APLKVYCGFDPTA+SLHLGNLL +IVLSWF
Sbjct: 48  PNVIGILEQRGLLDSITNESLRTISSNTINAPLKVYCGFDPTAQSLHLGNLLALIVLSWF 107

Query: 121 RRCGHNVVALIGGATARVGDPSGKSLERPELDVETLERNTAGIENTIRTILGRAQNLNLE 180
           RR GHNVVALIGGATARVGDPSGKSLERP+LDV+TLERNTAGIENTIRTILGR QN    
Sbjct: 108 RRSGHNVVALIGGATARVGDPSGKSLERPQLDVQTLERNTAGIENTIRTILGRVQN---- 163

Query: 181 ELSVGDGNLCDSSVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRLDSEQGM 240
             + G+GN    SVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRL+SE GM
Sbjct: 164 HPNSGNGN---DSVVVLNNYDWWKEFSLLDFLKRVGKYARVGSMMAKESVRKRLESEHGM 220

Query: 241 SYTEFTYQLLQGYDFLHLFQNEGVTVQIGGSDQWGNITAGTELVRKILQVESAVYGFTFP 300
           SYTEFTYQLLQGYDFL+LFQNEGV VQIGGSDQWGNITAGTEL+RKILQVE   YG TFP
Sbjct: 221 SYTEFTYQLLQGYDFLYLFQNEGVNVQIGGSDQWGNITAGTELIRKILQVEGGTYGLTFP 280

Query: 301 LLLKSDGTKFGKSEDGAIWLSPSLLSPYKFYQYFFSVPDADVVRFLKILTFLDIEEIVKL 360
           LLLKSDGTKFGKSEDGAIWL+PS+LSPYKFYQYFFSVPDADVVRFLKILTFLDI EIVKL
Sbjct: 281 LLLKSDGTKFGKSEDGAIWLAPSMLSPYKFYQYFFSVPDADVVRFLKILTFLDIYEIVKL 340

Query: 361 EEEMVKPGYVPNTAQRRLAEEVTRFVHGEDGLKEALRATEALRPGSETKLDWKTIEGIAE 420
           EEEM +PGY+PNTAQRRLAEEVTRFVHGEDGL EALRATEALRPGSETKLDWKTIEGIAE
Sbjct: 341 EEEMKRPGYMPNTAQRRLAEEVTRFVHGEDGLSEALRATEALRPGSETKLDWKTIEGIAE 400

Query: 421 DVPSCSLAYDEVLNQSLVDLSVSSGLFDSKSSARRLLKQGGLYLNNSRVNSENKKIEAAD 480
           DVPSCSLAYDEVLNQSLVDLSVSSGLFDSKS+ARRLLKQGG+YLNNSRV+SENK+IEAAD
Sbjct: 401 DVPSCSLAYDEVLNQSLVDLSVSSGLFDSKSAARRLLKQGGVYLNNSRVDSENKRIEAAD 460

Query: 481 IVDGKVLLLSAGKKNKVLVRIA 502
           IVDGKVLLLSAGKKNKVLVRIA
Sbjct: 461 IVDGKVLLLSAGKKNKVLVRIA 482