Miyakogusa Predicted Gene
- Lj0g3v0203219.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0203219.1 Non Characterized Hit- tr|I1LF32|I1LF32_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42928
PE,93.61,0,SUBFAMILY NOT NAMED,NULL; SEC24-RELATED PROTEIN,NULL;
Sec23_trunk,Sec23/Sec24, trunk domain;
Sec23_B,NODE_22086_length_2788_cov_141.460907.path2.1
(927 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g112310.1 | protein transporter Sec24-like CEF protein, pu... 1238 0.0
Medtr7g111710.1 | protein transporter Sec23-like protein | HC | ... 432 e-121
Medtr7g111710.2 | protein transporter Sec23-like protein | HC | ... 432 e-121
Medtr4g052930.1 | Sec23/Sec24 transport family protein | HC | ch... 78 3e-14
Medtr6g042060.1 | protein transporter Sec24-plant-like protein |... 57 8e-08
Medtr8g046560.1 | 26S proteasome non-ATPase regulatory subunit 6... 53 1e-06
>Medtr1g112310.1 | protein transporter Sec24-like CEF protein,
putative | HC | chr1:50827257-50842682 | 20130731
Length = 1111
Score = 1238 bits (3204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 620/744 (83%), Positives = 639/744 (85%), Gaps = 20/744 (2%)
Query: 204 QQSVGPPTMRAPPGPAVQP-----------------QSPYPM-PPQGAVQPPGSPFGAPS 245
Q +GPPTMR P PA P QSP+ M PPQG +QPP SPFGAPS
Sbjct: 232 QPPLGPPTMRTPAPPAQSPFNMAPPAQSPFNMAPPAQSPFNMAPPQGIMQPPSSPFGAPS 291
Query: 246 WQMQSXXXXXXXXXXXXXXXXXXXXXXXXXX-NQSMTTTISPAVGQTGAPMAGPSKIDPN 304
WQ Q NQSMTTTISPAVGQTGAPMAGPSKIDPN
Sbjct: 292 WQTQQQQQVGPPPTVPGSAQPPRMFGMPPPLPNQSMTTTISPAVGQTGAPMAGPSKIDPN 351
Query: 305 QIPRPTPGSSVILHETRQGNQATIPPPATSDYIVRDTGNCSPRYMRCTINQIPFTADLLT 364
QIPRPTPG+SVILHETRQGNQATIPPPATSDYIVRDTGNCSPRYM+CT+NQIPFTA+LLT
Sbjct: 352 QIPRPTPGTSVILHETRQGNQATIPPPATSDYIVRDTGNCSPRYMKCTVNQIPFTAELLT 411
Query: 365 TSGMQLAMLVQPLTLPHPSEEPIQVVDFGESGPVRCSRCKAYINPFMKFIDQGRRFICNL 424
TSGMQLAMLVQPL LPHPSEEPIQVVDFGESGPVRCSRCKAY+NPFMKFIDQGRRFICNL
Sbjct: 412 TSGMQLAMLVQPLALPHPSEEPIQVVDFGESGPVRCSRCKAYVNPFMKFIDQGRRFICNL 471
Query: 425 CGFSDETPRDYHCNLGPDGRRRDADERPELCRGTVEFVATKEFMVREPMPAVYFFLIDVS 484
CGFSDETPRDYHCNLGPDGRRRDADE+PELCRGTVEFVATKEFMVREPMPAVYFFLIDVS
Sbjct: 472 CGFSDETPRDYHCNLGPDGRRRDADEKPELCRGTVEFVATKEFMVREPMPAVYFFLIDVS 531
Query: 485 MNAVQTGATAAACSAIKQVITDLPEGPRTRVGVATFDSTIHFYNLKRALQQPLMLIVPDV 544
MNAVQTGATAAACSAI QVITDLPEGP T+VGVATFDSTIHFYNLKRALQQPLMLIVPDV
Sbjct: 532 MNAVQTGATAAACSAISQVITDLPEGPNTKVGVATFDSTIHFYNLKRALQQPLMLIVPDV 591
Query: 545 QDVYTPLQTDVIVPLSECRQHLELLLESIPTMFQNNRTSESXXXXXXXXXXXXMKDTGGK 604
QDVYTPLQTDVIV LSECRQHLELLLESIPTMFQ+NRTSES MKDTGGK
Sbjct: 592 QDVYTPLQTDVIVGLSECRQHLELLLESIPTMFQSNRTSESAFGAAIKAAFLAMKDTGGK 651
Query: 605 LLVFQSVLPSIGIGALSAREAEGRTKISAGEKEAQKLLQPADKTFKELAVEFAEYQVCVD 664
LLVFQSVLPSIGIGALSAREAEGRT ISAGEKEA KLLQPADKT KELAVE AEYQVCVD
Sbjct: 652 LLVFQSVLPSIGIGALSAREAEGRTNISAGEKEAHKLLQPADKTLKELAVELAEYQVCVD 711
Query: 665 VFVTTQTYVDMASISAIPRTTGGQVYYYYPFSALSDSAKLYNDLRWNITRPQGFEAVMRL 724
+FVTTQTY D+ASIS IPRTTGGQVYYY+PFSALSD AKLYNDLRWN+TRPQGFEAVMR+
Sbjct: 712 LFVTTQTYADIASISTIPRTTGGQVYYYFPFSALSDPAKLYNDLRWNVTRPQGFEAVMRV 771
Query: 725 RCSQGIQVQEYYGNFCKRIPTDVDLPGIDCDKTFMVTLKHDDKLQDGSECAFQCALLYTT 784
RCSQGIQVQEYYGNFCK IPTDVDLPGIDCDKTFMVTLKHDDKLQDGSECAFQCALLYTT
Sbjct: 772 RCSQGIQVQEYYGNFCKSIPTDVDLPGIDCDKTFMVTLKHDDKLQDGSECAFQCALLYTT 831
Query: 785 VHGQRRIRVITLSLPVTSMLSNLFRAADLDTQFCCFLKHAATEVPSKPLPLVREQVTNLC 844
V+GQRRIRVITLSLPVTSMLSNLFRAADLDTQFCCFLK AA E+PSKPLPLVREQVT LC
Sbjct: 832 VYGQRRIRVITLSLPVTSMLSNLFRAADLDTQFCCFLKQAANEIPSKPLPLVREQVTTLC 891
Query: 845 INALFSYRKFCATV-SSSGQXXXXXXXXXXXXXXXXXXXSTGLRTEAKIDERSFWINYVS 903
INALFSYRKFCATV SSSGQ STGLRTE KIDERSFWINYV+
Sbjct: 892 INALFSYRKFCATVSSSSGQLILPEALKLLPLYTLALTKSTGLRTEGKIDERSFWINYVT 951
Query: 904 SLSAPLAIPLVYPRMVAIHDLDSK 927
SLSAPLAIPLVYPRMVAIHDLDSK
Sbjct: 952 SLSAPLAIPLVYPRMVAIHDLDSK 975
>Medtr7g111710.1 | protein transporter Sec23-like protein | HC |
chr7:45883109-45872270 | 20130731
Length = 1020
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 310/514 (60%), Gaps = 4/514 (0%)
Query: 343 NCSPRYMRCTINQIPFTADLLTTSGMQLAMLVQPLTLPHPSEEPIQVVDFGESGPVRCSR 402
NC PRY+R T + IP + L + + L +V PL P E+ + ++ F + VRC R
Sbjct: 297 NCDPRYLRFTTSAIPSSQSLASRWHLPLGAVVCPLA-ESPDEDEVPIISFAPASVVRCRR 355
Query: 403 CKAYINPFMKFIDQGRRFICNLCGFSDETPRDYHCNLGPDGRRRDADERPELCRGTVEFV 462
C+ Y+NP++ F + GR+F CN+C ++ P +Y+ L G+R D ++RPEL +GTVEFV
Sbjct: 356 CRTYVNPYVTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDLNQRPELTKGTVEFV 415
Query: 463 ATKEFMVREPMPAVYFFLIDVSMNAVQTGATAAACSAIKQVITDLPEGPRTRVGVATFDS 522
A E+MVR PMP VYFFLIDVS++AV++G A IK + +LP PRT++G ATFDS
Sbjct: 416 APAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVAAQTIKSCLDELPGYPRTQIGFATFDS 475
Query: 523 TIHFYNLKRALQQPLMLIVPDVQDVYTPLQTDVIVPLSECRQHLELLLESIPTMFQNNRT 582
TIHFYN+K L QP ML+V D+ D++ PL D++V LSE R +E L+S+PTMFQ+N
Sbjct: 476 TIHFYNMKSTLAQPQMLVVSDLDDIFIPLPDDLLVNLSESRSVVEAFLDSLPTMFQDNVN 535
Query: 583 SESXXXXXXXXXXXXMKDTGGKLLVFQSVLPSIGIGALSAREAEGRTKISAGEKEAQKLL 642
ES M GGKLL+FQ+ LPS+G+G L R + R G + L
Sbjct: 536 LESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDSRVY---GTDKEHGLR 592
Query: 643 QPADKTFKELAVEFAEYQVCVDVFVTTQTYVDMASISAIPRTTGGQVYYYYPFSALSDSA 702
P D +K++A EF++YQ+ ++V+ + Y D+AS+ + + T GQVYYY F +
Sbjct: 593 LPEDPFYKQMAAEFSKYQISINVYAFSDKYTDIASLGTLAKYTAGQVYYYPAFQSAIHGE 652
Query: 703 KLYNDLRWNITRPQGFEAVMRLRCSQGIQVQEYYGNFCKRIPTDVDLPGIDCDKTFMVTL 762
KL ++LR ++TR +EAVMR+RC++G++ Y+GNF R + LP +DCDK F + L
Sbjct: 653 KLSHELRRDLTRETAWEAVMRIRCAKGVRFTTYHGNFMLRSTDLLALPAVDCDKAFAMQL 712
Query: 763 KHDDKLQDGSECAFQCALLYTTVHGQRRIRVITLSLPVTSMLSNLFRAADLDTQFCCFLK 822
++ L FQ ALLYT G+RRIRV T+++PV + L++++R AD F +
Sbjct: 713 SLEETLLTTQTIYFQVALLYTASCGERRIRVHTMAVPVVTDLADIYRLADTGAVVSLFCR 772
Query: 823 HAATEVPSKPLPLVREQVTNLCINALFSYRKFCA 856
A + S+ L R V + AL YR A
Sbjct: 773 LAIEKTSSQKLEDARNAVQLRIVKALKEYRNLYA 806
>Medtr7g111710.2 | protein transporter Sec23-like protein | HC |
chr7:45883073-45872270 | 20130731
Length = 1020
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/514 (41%), Positives = 310/514 (60%), Gaps = 4/514 (0%)
Query: 343 NCSPRYMRCTINQIPFTADLLTTSGMQLAMLVQPLTLPHPSEEPIQVVDFGESGPVRCSR 402
NC PRY+R T + IP + L + + L +V PL P E+ + ++ F + VRC R
Sbjct: 297 NCDPRYLRFTTSAIPSSQSLASRWHLPLGAVVCPLA-ESPDEDEVPIISFAPASVVRCRR 355
Query: 403 CKAYINPFMKFIDQGRRFICNLCGFSDETPRDYHCNLGPDGRRRDADERPELCRGTVEFV 462
C+ Y+NP++ F + GR+F CN+C ++ P +Y+ L G+R D ++RPEL +GTVEFV
Sbjct: 356 CRTYVNPYVTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDLNQRPELTKGTVEFV 415
Query: 463 ATKEFMVREPMPAVYFFLIDVSMNAVQTGATAAACSAIKQVITDLPEGPRTRVGVATFDS 522
A E+MVR PMP VYFFLIDVS++AV++G A IK + +LP PRT++G ATFDS
Sbjct: 416 APAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVAAQTIKSCLDELPGYPRTQIGFATFDS 475
Query: 523 TIHFYNLKRALQQPLMLIVPDVQDVYTPLQTDVIVPLSECRQHLELLLESIPTMFQNNRT 582
TIHFYN+K L QP ML+V D+ D++ PL D++V LSE R +E L+S+PTMFQ+N
Sbjct: 476 TIHFYNMKSTLAQPQMLVVSDLDDIFIPLPDDLLVNLSESRSVVEAFLDSLPTMFQDNVN 535
Query: 583 SESXXXXXXXXXXXXMKDTGGKLLVFQSVLPSIGIGALSAREAEGRTKISAGEKEAQKLL 642
ES M GGKLL+FQ+ LPS+G+G L R + R G + L
Sbjct: 536 LESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDSRVY---GTDKEHGLR 592
Query: 643 QPADKTFKELAVEFAEYQVCVDVFVTTQTYVDMASISAIPRTTGGQVYYYYPFSALSDSA 702
P D +K++A EF++YQ+ ++V+ + Y D+AS+ + + T GQVYYY F +
Sbjct: 593 LPEDPFYKQMAAEFSKYQISINVYAFSDKYTDIASLGTLAKYTAGQVYYYPAFQSAIHGE 652
Query: 703 KLYNDLRWNITRPQGFEAVMRLRCSQGIQVQEYYGNFCKRIPTDVDLPGIDCDKTFMVTL 762
KL ++LR ++TR +EAVMR+RC++G++ Y+GNF R + LP +DCDK F + L
Sbjct: 653 KLSHELRRDLTRETAWEAVMRIRCAKGVRFTTYHGNFMLRSTDLLALPAVDCDKAFAMQL 712
Query: 763 KHDDKLQDGSECAFQCALLYTTVHGQRRIRVITLSLPVTSMLSNLFRAADLDTQFCCFLK 822
++ L FQ ALLYT G+RRIRV T+++PV + L++++R AD F +
Sbjct: 713 SLEETLLTTQTIYFQVALLYTASCGERRIRVHTMAVPVVTDLADIYRLADTGAVVSLFCR 772
Query: 823 HAATEVPSKPLPLVREQVTNLCINALFSYRKFCA 856
A + S+ L R V + AL YR A
Sbjct: 773 LAIEKTSSQKLEDARNAVQLRIVKALKEYRNLYA 806
>Medtr4g052930.1 | Sec23/Sec24 transport family protein | HC |
chr4:19194396-19203164 | 20130731
Length = 745
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 167/430 (38%), Gaps = 70/430 (16%)
Query: 349 MRCTINQIPFTADLLTTSGMQLAMLVQPLT-LPHPSEEPIQVVDFGESGPV--RCSRCKA 405
+R T+++ P D SG+ + V P + ++ P+ +G SG + RC C A
Sbjct: 3 VRATVSRFPLDTDAREASGLLWGVTVAPFAAVDENNQSPV----YGSSGELLPRCENCWA 58
Query: 406 YINPFMKFIDQGRRFICNLCGFSDETPRDYHCNLGPDGRRRDADER---PELCRGTVEFV 462
Y N + + + C+LCG NL +G +A ER P+ C +
Sbjct: 59 YFNTYCDL--EQWSWGCSLCG-----------NL--NGLTSEAIERYSRPQSCAEMMSSF 103
Query: 463 ATKEFMVREPMPA--------VYFFLIDVSMNAVQTGATAAACSAIKQVITDLPEGPRTR 514
E E VY +D+S + T +A A + + P +
Sbjct: 104 VDLELPQEEESSGNAALQACPVYVAAVDLSSSEEFLELTKSALLAALEALA-----PGSL 158
Query: 515 VGVATFDSTIHFYNL-------KRALQQPLMLIVPDVQDVYTPLQTDVIVPLSECRQHLE 567
G+ATF + Y++ K P + +++DV LQ + P+ C+ +
Sbjct: 159 FGLATFSHKLGLYDVQGPIPVVKNVFIPPEGTLSAELEDVMPLLQ--FLAPVDTCKDRIA 216
Query: 568 LLLESI-PT---------------MFQNNRTSESXXXXXXXXXXXXMKDTGG--KLLVFQ 609
LE++ PT + R + +T ++ F
Sbjct: 217 SALETLRPTTSWERTPGAGQGMDGVLLGGRGFGAAMESLCSYLGSEYGNTFALARVFAFL 276
Query: 610 SVLPSIGIGALSAREAEGRTKISAGEKEAQKLLQPADKTFKELAVEFAEYQVCVDVFVTT 669
S P G G L R G S E + LL +K+LA + VCVD+F T
Sbjct: 277 SGPPDYGAGQLDTRRY-GEQYASKREDADRALLPEQTPFYKDLAAVAVQAGVCVDIFAVT 335
Query: 670 QTYVDMASISAIPRTTGGQVYYYYPFSALSDSAKLYNDLRWNITRPQGFEAVMRLRCSQG 729
Y D+AS+ + +GG +++Y ++ + L D+ ++RP F V+RLR S
Sbjct: 336 NEYTDLASLKFLSIESGGSLFFYTS----TEDSTLPQDMYRMLSRPYAFSCVLRLRTSTE 391
Query: 730 IQVQEYYGNF 739
+ YG+F
Sbjct: 392 FKPGNSYGHF 401
>Medtr6g042060.1 | protein transporter Sec24-plant-like protein | HC
| chr6:14525686-14525009 | 20130731
Length = 80
Score = 57.0 bits (136), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 652 LAVEFAEYQVCVDVFVTTQTYVDMASISAIPRTTGGQVYYYYPFSALSDSAKLYNDLRWN 711
+AVEF++YQ+ V+V+ + Y D+AS+ + + T G+VYYY F KL ++LR
Sbjct: 1 MAVEFSKYQISVNVYAFSDKYTDIASLGTLAKYTTGKVYYYPAFQLAIHGEKLSHELRRG 60
Query: 712 ITRPQGFEA 720
+TR EA
Sbjct: 61 LTRETVGEA 69
>Medtr8g046560.1 | 26S proteasome non-ATPase regulatory subunit 6 |
LC | chr8:18658485-18663242 | 20130731
Length = 523
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Query: 295 MAGPSKID-PNQIPRPTPGSSVILHETRQGNQATI 328
MAGPSK PN+IP PTPG+ +ILHETR+GNQA I
Sbjct: 1 MAGPSKTTIPNKIPWPTPGTPLILHETREGNQAMI 35