Miyakogusa Predicted Gene

Lj0g3v0202109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0202109.1 Non Characterized Hit- tr|I1M6F5|I1M6F5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,49,3e-19,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,CUFF.12849.1
         (108 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g060280.4 | cellulose synthase E1-like protein | HC | chr3...   118   1e-27
Medtr3g060280.2 | cellulose synthase E1-like protein | HC | chr3...   118   1e-27
Medtr3g060280.3 | cellulose synthase E1-like protein | HC | chr3...   117   2e-27
Medtr3g060280.1 | cellulose synthase E1-like protein | HC | chr3...   117   3e-27
Medtr3g060240.1 | cellulose synthase E1-like protein | HC | chr3...    97   4e-21
Medtr3g060220.1 | cellulose synthase-like protein | HC | chr3:23...    91   2e-19
Medtr3g060220.2 | cellulose synthase-like protein | HC | chr3:23...    86   6e-18

>Medtr3g060280.4 | cellulose synthase E1-like protein | HC |
           chr3:23658243-23652185 | 20130731
          Length = 455

 Score =  118 bits (296), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/103 (59%), Positives = 65/103 (63%), Gaps = 4/103 (3%)

Query: 8   SPLFETTRGRGRFIYRPFAISLFVAICFIWAYRFTHITTRT---GEEDATKYXXXXXXXX 64
           SPLFET +GRGR IYR F+ISLF AI FIW YRF HI T      EED  K         
Sbjct: 9   SPLFETKKGRGRLIYRLFSISLFTAISFIWLYRFNHIITTNYTQQEEDGGK-LVWFGMLA 67

Query: 65  XXXXXXXYWILTQALRWNLVYRQPFNTRLSQRYEDVLPAVDIF 107
                  YW LTQA RWNLV+RQPF  RLSQRYE +LP VDIF
Sbjct: 68  AELWFGFYWFLTQAFRWNLVFRQPFKDRLSQRYEHMLPEVDIF 110


>Medtr3g060280.2 | cellulose synthase E1-like protein | HC |
           chr3:23658243-23652209 | 20130731
          Length = 584

 Score =  118 bits (295), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/102 (57%), Positives = 65/102 (63%), Gaps = 2/102 (1%)

Query: 8   SPLFETTRGRGRFIYRPFAISLFVAICFIWAYRFTHI--TTRTGEEDATKYXXXXXXXXX 65
           SPLFET +GRGR IYR F+ISLF AI FIW YRF HI  T  T +E+             
Sbjct: 9   SPLFETKKGRGRLIYRLFSISLFTAISFIWLYRFNHIITTNYTQQEEDGGKLVWFGMLAA 68

Query: 66  XXXXXXYWILTQALRWNLVYRQPFNTRLSQRYEDVLPAVDIF 107
                 YW LTQA RWNLV+RQPF  RLSQRYE +LP VDIF
Sbjct: 69  ELWFGFYWFLTQAFRWNLVFRQPFKDRLSQRYEHMLPEVDIF 110


>Medtr3g060280.3 | cellulose synthase E1-like protein | HC |
           chr3:23658243-23652185 | 20130731
          Length = 591

 Score =  117 bits (294), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 59/102 (57%), Positives = 65/102 (63%), Gaps = 2/102 (1%)

Query: 8   SPLFETTRGRGRFIYRPFAISLFVAICFIWAYRFTHI--TTRTGEEDATKYXXXXXXXXX 65
           SPLFET +GRGR IYR F+ISLF AI FIW YRF HI  T  T +E+             
Sbjct: 9   SPLFETKKGRGRLIYRLFSISLFTAISFIWLYRFNHIITTNYTQQEEDGGKLVWFGMLAA 68

Query: 66  XXXXXXYWILTQALRWNLVYRQPFNTRLSQRYEDVLPAVDIF 107
                 YW LTQA RWNLV+RQPF  RLSQRYE +LP VDIF
Sbjct: 69  ELWFGFYWFLTQAFRWNLVFRQPFKDRLSQRYEHMLPEVDIF 110


>Medtr3g060280.1 | cellulose synthase E1-like protein | HC |
           chr3:23658246-23652185 | 20130731
          Length = 747

 Score =  117 bits (293), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/102 (57%), Positives = 65/102 (63%), Gaps = 2/102 (1%)

Query: 8   SPLFETTRGRGRFIYRPFAISLFVAICFIWAYRFTHI--TTRTGEEDATKYXXXXXXXXX 65
           SPLFET +GRGR IYR F+ISLF AI FIW YRF HI  T  T +E+             
Sbjct: 9   SPLFETKKGRGRLIYRLFSISLFTAISFIWLYRFNHIITTNYTQQEEDGGKLVWFGMLAA 68

Query: 66  XXXXXXYWILTQALRWNLVYRQPFNTRLSQRYEDVLPAVDIF 107
                 YW LTQA RWNLV+RQPF  RLSQRYE +LP VDIF
Sbjct: 69  ELWFGFYWFLTQAFRWNLVFRQPFKDRLSQRYEHMLPEVDIF 110


>Medtr3g060240.1 | cellulose synthase E1-like protein | HC |
           chr3:23643696-23638774 | 20130731
          Length = 736

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/103 (47%), Positives = 61/103 (59%), Gaps = 6/103 (5%)

Query: 5   DECSPLFETTRGRGRFIYRPFAISLFVAICFIWAYRFTHITTRTGEEDATKYXXXXXXXX 64
           +E  PLFET RG+GR +Y  F+ SLFV IC IW YR ++I  + G+              
Sbjct: 4   EEYYPLFETRRGKGRLMYIIFSFSLFVGICSIWVYRVSYIPKKDGK------WVWIGLLC 57

Query: 65  XXXXXXXYWILTQALRWNLVYRQPFNTRLSQRYEDVLPAVDIF 107
                  YW L QALRWN ++RQPF  RLSQRY ++LP VDIF
Sbjct: 58  AELWFGFYWFLRQALRWNPIFRQPFPERLSQRYGNMLPKVDIF 100


>Medtr3g060220.1 | cellulose synthase-like protein | HC |
           chr3:23632564-23625510 | 20130731
          Length = 732

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/103 (44%), Positives = 59/103 (57%), Gaps = 6/103 (5%)

Query: 5   DECSPLFETTRGRGRFIYRPFAISLFVAICFIWAYRFTHITTRTGEEDATKYXXXXXXXX 64
           +E  PLFET R +GR +YR F+ SL + I  IW YR ++I    G+              
Sbjct: 4   EEYYPLFETRRRKGRLMYRVFSFSLLIGIWSIWVYRLSYIPKEDGK------WVWIGLLC 57

Query: 65  XXXXXXXYWILTQALRWNLVYRQPFNTRLSQRYEDVLPAVDIF 107
                  YW L QALRWN ++RQPF  RL+QRYE++LP VDIF
Sbjct: 58  AELWFGFYWFLRQALRWNPIFRQPFPERLTQRYENMLPKVDIF 100


>Medtr3g060220.2 | cellulose synthase-like protein | HC |
           chr3:23632575-23625380 | 20130731
          Length = 733

 Score = 86.3 bits (212), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 7/104 (6%)

Query: 5   DECSPLFETTRGRGRFIYRPFAISLFVAICFIWAYRFTHITTRTGEEDATKYXXXXXXXX 64
           +E  PLFET R +GR +YR F+ SL + I  IW YR ++I    G+              
Sbjct: 4   EEYYPLFETRRRKGRLMYRVFSFSLLIGIWSIWVYRLSYIPKEDGK------WVWIGLLC 57

Query: 65  XXXXXXXYWILTQALRWNLVYRQPFNTRLSQ-RYEDVLPAVDIF 107
                  YW L QALRWN ++RQPF  RL+Q RYE++LP VDIF
Sbjct: 58  AELWFGFYWFLRQALRWNPIFRQPFPERLTQSRYENMLPKVDIF 101