Miyakogusa Predicted Gene

Lj0g3v0201269.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0201269.1 Non Characterized Hit- tr|I1K7S7|I1K7S7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,38.93,0.0000005,seg,NULL,CUFF.12782.1
         (217 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g111780.1 | ovate transcriptional repressor | HC | chr3:52...    52   4e-07

>Medtr3g111780.1 | ovate transcriptional repressor | HC |
          chr3:52290522-52289425 | 20130731
          Length = 284

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 6/49 (12%)

Query: 1  MAKSFKLKFKIPSFQLCCSKH-----HHPTVPSIHRLSPMNPKACDVGY 44
          M+K FK+KF IPSFQ+C S        +P  P+I+RLSP+N KA D+GY
Sbjct: 1  MSKRFKMKFTIPSFQMCRSNDLSSFPGNPG-PAIYRLSPVNSKAHDIGY 48