Miyakogusa Predicted Gene

Lj0g3v0201089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0201089.1 Non Characterized Hit- tr|A6MZP2|A6MZP2_ORYSI
Putative uncharacterized protein (Fragment) OS=Oryza s,65.15,6e-19,GB
DEF: HYPOTHETICAL PROTEIN,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
MMgT,Magnesium transporter,CUFF.12786.1
         (106 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g101880.1 | membrane magnesium transporter | HC | chr7:410...   155   6e-39
Medtr1g063370.1 | membrane magnesium transporter | HC | chr1:279...   154   1e-38

>Medtr7g101880.1 | membrane magnesium transporter | HC |
           chr7:41099043-41102545 | 20130731
          Length = 107

 Score =  155 bits (393), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 71/90 (78%), Positives = 81/90 (90%)

Query: 17  HAAYSTIQYRALLKITEEEFSGPPLNVVIELTLGLVICMWAALTVPGNFLSIQPDSEENR 76
           HAAYSTIQY++LLKITE+EF+ PP NVVIEL +GL++C WAALTVPG FLSI P S+ENR
Sbjct: 18  HAAYSTIQYKSLLKITEDEFTAPPFNVVIELFIGLLLCFWAALTVPGKFLSIHPHSDENR 77

Query: 77  IVSLPANLDFMIFNHRGKVFPVETNAKLIH 106
           IVSLPANLDFMIFNHRGKVFP+ET+ KL H
Sbjct: 78  IVSLPANLDFMIFNHRGKVFPLETDLKLKH 107


>Medtr1g063370.1 | membrane magnesium transporter | HC |
           chr1:27971291-27967384 | 20130731
          Length = 106

 Score =  154 bits (390), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 73/90 (81%), Positives = 78/90 (86%)

Query: 17  HAAYSTIQYRALLKITEEEFSGPPLNVVIELTLGLVICMWAALTVPGNFLSIQPDSEENR 76
           HAAYSTIQYR LLKITEEEFSG PL VVIELTLGL++C WAAL VPG FL I PDS+ENR
Sbjct: 17  HAAYSTIQYRTLLKITEEEFSGSPLIVVIELTLGLLLCTWAALNVPGKFLCILPDSDENR 76

Query: 77  IVSLPANLDFMIFNHRGKVFPVETNAKLIH 106
           IVSLP NLDFMIFNHRGK+FPVE N +L H
Sbjct: 77  IVSLPGNLDFMIFNHRGKIFPVEMNERLRH 106