Miyakogusa Predicted Gene

Lj0g3v0200849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0200849.1 Non Characterized Hit- tr|K4DA52|K4DA52_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,34.31,7e-18,no
description,Homeodomain-like; seg,NULL; HOMEOBOX PROTEIN
KNOTTED-1-RELATED,NULL; HOMEOBOX PROTEIN,CUFF.12749.1
         (254 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g051532.1 | BEL1-related homeotic protein | HC | chr4:1845...   151   6e-37
Medtr1g057790.2 | BEL1-related homeotic protein | HC | chr1:2541...   112   3e-25
Medtr1g057790.1 | BEL1-related homeotic protein | HC | chr1:2541...   112   3e-25
Medtr7g106320.3 | BEL1-related homeotic protein | HC | chr7:4323...    97   1e-20
Medtr7g106320.1 | BEL1-related homeotic protein | HC | chr7:4323...    97   1e-20
Medtr7g106320.2 | BEL1-related homeotic protein | HC | chr7:4323...    97   1e-20

>Medtr4g051532.1 | BEL1-related homeotic protein | HC |
           chr4:18455630-18460926 | 20130731
          Length = 711

 Score =  151 bits (382), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/295 (42%), Positives = 158/295 (53%), Gaps = 78/295 (26%)

Query: 2   QVSNWFINARVRLWKPXXXXXXXXXXXXXXKANGSKESSQSTNKERGSSPPNNVTPESGD 61
           QVSNWFINARVRLWKP              + N SK+++  + KE G +           
Sbjct: 448 QVSNWFINARVRLWKPMVEEMYLEETKEQEENNDSKDNTNKS-KELGVT----------- 495

Query: 62  EIKLEHIKNLQSSXISTNSSVG--------------------GGPFQSHSGFQLVGSSDH 101
             KL+ I NL S   + N+                       GG FQS+SGF L GSSD 
Sbjct: 496 --KLDQINNLHSKAENFNNQNPSPTVISSSNNSMSTSTMGGEGGSFQSNSGFHLAGSSD- 552

Query: 102 MIQRSS-------------EMQNNSPSSIGNNIRFGNERNHKDLGYHALMT----DHGGG 144
            +QRS              EM++N  S    NI    ER+++D   + LM+     H GG
Sbjct: 553 -VQRSPKNSHQGSFLSMDMEMKSNRES----NIEVEVERHNQDKNGYPLMSGNENHHDGG 607

Query: 145 FGSLFSSMEDIGMSRFNVTHEQLASRFHGNNNNGVSLTLGLHHNENLPNISATHQHGFLS 204
           +GS   SMEDI   RFNV+ EQLA RFHG   NGVSLTLGL HNEN+P +S+T QHGFLS
Sbjct: 608 YGSF--SMEDI--RRFNVS-EQLAPRFHG---NGVSLTLGLPHNENIP-LSST-QHGFLS 657

Query: 205 QDIHLGMGL-EMGSTNNGNEVVT--------GTDYDTIDIQNRKRFSAQSLPDFC 250
           Q++HLG  + EMGS  N NE  T         T+Y++IDI+NRKRF+AQ L +F 
Sbjct: 658 QNLHLGGTIDEMGS--NENEFCTINTTPSHSETNYESIDIENRKRFAAQLLRNFV 710


>Medtr1g057790.2 | BEL1-related homeotic protein | HC |
           chr1:25416121-25421148 | 20130731
          Length = 649

 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/273 (36%), Positives = 139/273 (50%), Gaps = 38/273 (13%)

Query: 2   QVSNWFINARVRLWKPXXXXXXXXXXXXXXKANGSKESSQSTNKERGSS----PPNNVTP 57
           QVSNWFINARVRLWKP              + NGS+++  S N +   S     P    P
Sbjct: 392 QVSNWFINARVRLWKP-MVEEMYMEEMKDQELNGSEDNKSSKNTDEDPSMKTPTPQERVP 450

Query: 58  ESGDEIK-LEHIKNLQSSXISTNS-SVGGGPFQSHSGFQLVGSSDHMIQRSSEMQNN--- 112
            S  E K     +++    +ST S S  G   +++SGF      D + Q S +   N   
Sbjct: 451 TSETESKSFNSKQDIPMVSVSTPSTSPIGVNVRNNSGFSFT-ELDGITQASPKRTRNHEI 509

Query: 113 --SPSSIGNN----------IRFGNERNHKDLGYHAL--MTDHGGGFGSLFSSMEDIGMS 158
             SP+ + +N          ++FG++R  +D GY  +   T+   GFG     ME+IG  
Sbjct: 510 LQSPNHVKSNETTANNEQISMKFGDDRQSRD-GYCFMGNQTNFIAGFGQY--PMEEIG-- 564

Query: 159 RFNVTHEQLASRFHGNNNNGVSLTLGLHHNENLPNISATHQHGFLSQDIHLGMGLEMGST 218
           RF+   EQ A RF G NNNGVSLTLGL H + L   S THQ    +Q+I LG  L++  T
Sbjct: 565 RFDA--EQFAPRFSG-NNNGVSLTLGLPHCDTL---SGTHQSFMPNQNIQLGRRLDISET 618

Query: 219 NNGNEVVTGTDYDTIDIQNRKRFSAQSLPDFCG 251
           N   +  +   +++I++QN KRF+AQ LPDF  
Sbjct: 619 NEFGD--SSAAFESINMQNPKRFAAQLLPDFVA 649


>Medtr1g057790.1 | BEL1-related homeotic protein | HC |
           chr1:25416121-25421208 | 20130731
          Length = 649

 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/273 (36%), Positives = 139/273 (50%), Gaps = 38/273 (13%)

Query: 2   QVSNWFINARVRLWKPXXXXXXXXXXXXXXKANGSKESSQSTNKERGSS----PPNNVTP 57
           QVSNWFINARVRLWKP              + NGS+++  S N +   S     P    P
Sbjct: 392 QVSNWFINARVRLWKP-MVEEMYMEEMKDQELNGSEDNKSSKNTDEDPSMKTPTPQERVP 450

Query: 58  ESGDEIK-LEHIKNLQSSXISTNS-SVGGGPFQSHSGFQLVGSSDHMIQRSSEMQNN--- 112
            S  E K     +++    +ST S S  G   +++SGF      D + Q S +   N   
Sbjct: 451 TSETESKSFNSKQDIPMVSVSTPSTSPIGVNVRNNSGFSFT-ELDGITQASPKRTRNHEI 509

Query: 113 --SPSSIGNN----------IRFGNERNHKDLGYHAL--MTDHGGGFGSLFSSMEDIGMS 158
             SP+ + +N          ++FG++R  +D GY  +   T+   GFG     ME+IG  
Sbjct: 510 LQSPNHVKSNETTANNEQISMKFGDDRQSRD-GYCFMGNQTNFIAGFGQY--PMEEIG-- 564

Query: 159 RFNVTHEQLASRFHGNNNNGVSLTLGLHHNENLPNISATHQHGFLSQDIHLGMGLEMGST 218
           RF+   EQ A RF G NNNGVSLTLGL H + L   S THQ    +Q+I LG  L++  T
Sbjct: 565 RFDA--EQFAPRFSG-NNNGVSLTLGLPHCDTL---SGTHQSFMPNQNIQLGRRLDISET 618

Query: 219 NNGNEVVTGTDYDTIDIQNRKRFSAQSLPDFCG 251
           N   +  +   +++I++QN KRF+AQ LPDF  
Sbjct: 619 NEFGD--SSAAFESINMQNPKRFAAQLLPDFVA 649


>Medtr7g106320.3 | BEL1-related homeotic protein | HC |
           chr7:43238890-43244501 | 20130731
          Length = 660

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 41/273 (15%)

Query: 2   QVSNWFINARVRLWKPXXXXXXXXXXXXXXKANGSKESSQSTNKERGSSPPNNVTPE--- 58
           QVSNWFINARVRLWKP              ++  +++SS      +  +  +   P+   
Sbjct: 404 QVSNWFINARVRLWKPMVEEMYVEEMKENEQSKSNEDSSMKITSSQEKALTSETEPKGYN 463

Query: 59  SGDEIKLEHIKNLQSSXISTNSSVGGGPFQSHSGFQLVGSSD--------HMIQRSSEMQ 110
           S  +I       L S      S + G   +++SGF  +GSS+            R+ E+ 
Sbjct: 464 STQDISTSQDTPLISVSRPQTSPLVGN-VRNNSGFSFIGSSELEGIPQGSPKKPRNHELM 522

Query: 111 NNSPSSI------GNN----IRFGNERNHKDLGYHAL--MTDHGGGFGSLFSSMEDIGMS 158
           +N  S I       NN    ++FG++R ++D GY  +   T+  GGFG     + DIG  
Sbjct: 523 HNPNSFIDVKHNEANNEELSMKFGDDRQNRD-GYSFMGNQTNFIGGFGQY--PIGDIG-- 577

Query: 159 RFNVTHEQLASRFHGNNNNGVSLTLGLHHNENLPNISATHQHGFLSQDIHLGMGLEMGST 218
           RF+   EQ A RF  NN   VSLTLGL       +I   HQ    +Q+I LG  +++   
Sbjct: 578 RFD--SEQFAPRFSSNN---VSLTLGLD------SIQGNHQTFLPNQNIQLGRSIDISEP 626

Query: 219 NNGNEVVTGT-DYDTIDIQNRKRFSAQSLPDFC 250
           N    + T +  Y++I++QN KRF+AQ LPDF 
Sbjct: 627 NEFGSINTSSPQYESINMQNPKRFAAQLLPDFV 659


>Medtr7g106320.1 | BEL1-related homeotic protein | HC |
           chr7:43238674-43244501 | 20130731
          Length = 660

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 41/273 (15%)

Query: 2   QVSNWFINARVRLWKPXXXXXXXXXXXXXXKANGSKESSQSTNKERGSSPPNNVTPE--- 58
           QVSNWFINARVRLWKP              ++  +++SS      +  +  +   P+   
Sbjct: 404 QVSNWFINARVRLWKPMVEEMYVEEMKENEQSKSNEDSSMKITSSQEKALTSETEPKGYN 463

Query: 59  SGDEIKLEHIKNLQSSXISTNSSVGGGPFQSHSGFQLVGSSD--------HMIQRSSEMQ 110
           S  +I       L S      S + G   +++SGF  +GSS+            R+ E+ 
Sbjct: 464 STQDISTSQDTPLISVSRPQTSPLVGN-VRNNSGFSFIGSSELEGIPQGSPKKPRNHELM 522

Query: 111 NNSPSSI------GNN----IRFGNERNHKDLGYHAL--MTDHGGGFGSLFSSMEDIGMS 158
           +N  S I       NN    ++FG++R ++D GY  +   T+  GGFG     + DIG  
Sbjct: 523 HNPNSFIDVKHNEANNEELSMKFGDDRQNRD-GYSFMGNQTNFIGGFGQY--PIGDIG-- 577

Query: 159 RFNVTHEQLASRFHGNNNNGVSLTLGLHHNENLPNISATHQHGFLSQDIHLGMGLEMGST 218
           RF+   EQ A RF  NN   VSLTLGL       +I   HQ    +Q+I LG  +++   
Sbjct: 578 RFD--SEQFAPRFSSNN---VSLTLGLD------SIQGNHQTFLPNQNIQLGRSIDISEP 626

Query: 219 NNGNEVVTGT-DYDTIDIQNRKRFSAQSLPDFC 250
           N    + T +  Y++I++QN KRF+AQ LPDF 
Sbjct: 627 NEFGSINTSSPQYESINMQNPKRFAAQLLPDFV 659


>Medtr7g106320.2 | BEL1-related homeotic protein | HC |
           chr7:43239558-43244496 | 20130731
          Length = 660

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 132/273 (48%), Gaps = 41/273 (15%)

Query: 2   QVSNWFINARVRLWKPXXXXXXXXXXXXXXKANGSKESSQSTNKERGSSPPNNVTPE--- 58
           QVSNWFINARVRLWKP              ++  +++SS      +  +  +   P+   
Sbjct: 404 QVSNWFINARVRLWKPMVEEMYVEEMKENEQSKSNEDSSMKITSSQEKALTSETEPKGYN 463

Query: 59  SGDEIKLEHIKNLQSSXISTNSSVGGGPFQSHSGFQLVGSSD--------HMIQRSSEMQ 110
           S  +I       L S      S + G   +++SGF  +GSS+            R+ E+ 
Sbjct: 464 STQDISTSQDTPLISVSRPQTSPLVGN-VRNNSGFSFIGSSELEGIPQGSPKKPRNHELM 522

Query: 111 NNSPSSI------GNN----IRFGNERNHKDLGYHAL--MTDHGGGFGSLFSSMEDIGMS 158
           +N  S I       NN    ++FG++R ++D GY  +   T+  GGFG     + DIG  
Sbjct: 523 HNPNSFIDVKHNEANNEELSMKFGDDRQNRD-GYSFMGNQTNFIGGFGQY--PIGDIG-- 577

Query: 159 RFNVTHEQLASRFHGNNNNGVSLTLGLHHNENLPNISATHQHGFLSQDIHLGMGLEMGST 218
           RF+   EQ A RF  NN   VSLTLGL       +I   HQ    +Q+I LG  +++   
Sbjct: 578 RFD--SEQFAPRFSSNN---VSLTLGLD------SIQGNHQTFLPNQNIQLGRSIDISEP 626

Query: 219 NNGNEVVTGT-DYDTIDIQNRKRFSAQSLPDFC 250
           N    + T +  Y++I++QN KRF+AQ LPDF 
Sbjct: 627 NEFGSINTSSPQYESINMQNPKRFAAQLLPDFV 659