Miyakogusa Predicted Gene

Lj0g3v0200159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0200159.1 Non Characterized Hit- tr|I1MQK5|I1MQK5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24871
PE,38.46,4e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.12695.1
         (138 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g081930.1 | organic cation/carnitine transporter | HC | ch...   190   3e-49
Medtr4g081480.1 | organic cation/carnitine transporter, putative...   186   5e-48
Medtr2g081960.1 | organic cation/carnitine transporter | HC | ch...   185   9e-48
Medtr4g030210.1 | organic cation/carnitine transporter | HC | ch...    61   3e-10
Medtr4g030040.2 | organic cation/carnitine transporter | HC | ch...    60   5e-10
Medtr8g447340.1 | organic cation/carnitine transporter | HC | ch...    59   1e-09
Medtr4g030040.1 | organic cation/carnitine transporter | HC | ch...    59   2e-09
Medtr8g039070.1 | organic cation/carnitine transporter, putative...    49   2e-06
Medtr8g039190.1 | organic cation/carnitine transporter | HC | ch...    47   5e-06

>Medtr2g081930.1 | organic cation/carnitine transporter | HC |
           chr2:34422730-34417907 | 20130731
          Length = 527

 Score =  190 bits (483), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 92/137 (67%), Positives = 109/137 (79%), Gaps = 6/137 (4%)

Query: 3   ATLSDDLRTPMLPAAEKKA-EVEKICIDEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHT 61
           ++LS+DL +P+LP + K + E EKICIDEML+KYCGEFG+WQLKHF+LTSLAWALEAFHT
Sbjct: 6   SSLSEDLNSPILPPSSKTSNETEKICIDEMLEKYCGEFGKWQLKHFILTSLAWALEAFHT 65

Query: 62  MVMIFADXXXXXXXXXRCVAGSGCSAAVGSVCGLRPGEWEWVGGNGASTVSEWGLICGEK 121
           MVMIFAD         +CV G  CSA  GSVC +    W+WV G GASTVSEW LICG+K
Sbjct: 66  MVMIFAD----REPDWKCVEGMECSAN-GSVCDMASSSWQWVAGEGASTVSEWSLICGDK 120

Query: 122 YKVGLVQAIFFAGCMIG 138
           +K+GLVQA+FFAGCMIG
Sbjct: 121 FKIGLVQALFFAGCMIG 137


>Medtr4g081480.1 | organic cation/carnitine transporter, putative |
           HC | chr4:31609955-31610392 | 20130731
          Length = 145

 Score =  186 bits (472), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 90/141 (63%), Positives = 103/141 (73%), Gaps = 7/141 (4%)

Query: 1   MAATLSDDLRTPMLPAAEKKAEVEKICIDEMLQKYCGEFGRWQLKHFVLTSLAWALEAFH 60
           ++  +  D  +P+LP    ++  EK CIDEMLQ YCGEFGRWQLKHFVLTSLAWALEAFH
Sbjct: 8   ISNNVDTDFNSPLLPPPSNESTPEKQCIDEMLQNYCGEFGRWQLKHFVLTSLAWALEAFH 67

Query: 61  TMVMIFADXXXXXXXXXRC---VAGSGCSAAVGSVCGLRPGEWEWVGGNGASTVSEWGLI 117
           TMVMIFAD         RC   VAG GC     +VC L PG WEWVGG  +STV+EWGL+
Sbjct: 68  TMVMIFAD----REPEWRCLDGVAGLGCDLTAKNVCKLEPGSWEWVGGAASSTVAEWGLV 123

Query: 118 CGEKYKVGLVQAIFFAGCMIG 138
           CGEK+KVGLVQA+FFAGCM G
Sbjct: 124 CGEKFKVGLVQAVFFAGCMFG 144


>Medtr2g081960.1 | organic cation/carnitine transporter | HC |
           chr2:34439544-34439101 | 20130731
          Length = 147

 Score =  185 bits (470), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 94/141 (66%), Positives = 107/141 (75%), Gaps = 8/141 (5%)

Query: 1   MAATLS---DDLRTPMLPAAEKKAEVEKICIDEMLQKYCGEFGRWQLKHFVLTSLAWALE 57
           MAATLS   DDL +P++    KKA  EKICIDEML+KYCGEFG+WQLKHF+LT LAWALE
Sbjct: 1   MAATLSSFSDDLHSPIMSPPSKKAGTEKICIDEMLEKYCGEFGKWQLKHFILTCLAWALE 60

Query: 58  AFHTMVMIFADXXXXXXXXXRCVAGSGCSAAVGSVCGLRPGEWEWVGGNGASTVSEWGLI 117
           AFHTMVMIFAD         +CV G  CSA  GSVC +    WEW+GG  ASTV+EW LI
Sbjct: 61  AFHTMVMIFAD----REPDWKCVEGMECSAD-GSVCDMASSSWEWIGGKDASTVTEWSLI 115

Query: 118 CGEKYKVGLVQAIFFAGCMIG 138
           CG+K+KVGLVQA+FF GCMIG
Sbjct: 116 CGDKFKVGLVQAVFFTGCMIG 136


>Medtr4g030210.1 | organic cation/carnitine transporter | HC |
           chr4:10399532-10405397 | 20130731
          Length = 513

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 5/110 (4%)

Query: 29  DEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADXXXXXXXXXRCVAGSGCSAA 88
           DEM+++  G FG  +    +L S A   +A  + + I+ D          C   + C++ 
Sbjct: 31  DEMIERSLGTFGWVEFVQCILVSFAMFFDAQQSFITIYTDDYPTW----HCTDSTTCNSN 86

Query: 89  VGSVCGLRPGEWEWVGGNGASTVSEWGLICGEKYKVGLVQAIFFAGCMIG 138
             ++C +    W W G    + +S+W L C   +  GL Q+ FF GC+IG
Sbjct: 87  -SNICKIPKSSWSWDGPVQKTIISQWSLECASSFITGLPQSSFFIGCLIG 135


>Medtr4g030040.2 | organic cation/carnitine transporter | HC |
           chr4:10376992-10379776 | 20130731
          Length = 508

 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 8/128 (6%)

Query: 14  LPAAEKKAEVEKICI---DEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADXX 70
           LP++  +A  E+  I   DEM+++  G FG  +    +L S A   +A  + + I+ D  
Sbjct: 7   LPSSMPQASSEEKVIPSTDEMMERGLGRFGWVEFVQCILVSFAMFFDAQQSFITIYTDEY 66

Query: 71  XXXXXXXRCVAGSGCSAAVGSVCGLRPGEWEWVGGNGASTVSEWGLICGEKYKVGLVQAI 130
                   C   + C A   ++C +    W W G    + +S+W L C   +  GL Q+ 
Sbjct: 67  QTW----HCTNPTTC-AWDSNICKIPRSSWSWDGPAHKTVISQWSLECASSFVTGLPQSS 121

Query: 131 FFAGCMIG 138
           FF GC+ G
Sbjct: 122 FFIGCLFG 129


>Medtr8g447340.1 | organic cation/carnitine transporter | HC |
           chr8:18601016-18599285 | 20130731
          Length = 526

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 3/110 (2%)

Query: 32  LQKYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADXXXXXXXXXRCV-AGSGC--SAA 88
           ++K  GE    Q    +L S AW  +A  T + +F D           +   +GC  + +
Sbjct: 32  IEKCIGELNWSQFFQALLISFAWIFDAQQTFITVFTDEVPSWHCTGENIDILNGCYSTPS 91

Query: 89  VGSVCGLRPGEWEWVGGNGASTVSEWGLICGEKYKVGLVQAIFFAGCMIG 138
              VC    G W W G   AS +SEW + C      GL  ++FF GC++G
Sbjct: 92  FNDVCKFPKGSWAWDGPPQASIISEWAMQCESSIITGLPASMFFMGCLVG 141


>Medtr4g030040.1 | organic cation/carnitine transporter | HC |
           chr4:10377691-10379776 | 20130731
          Length = 509

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 22  EVEKI--CIDEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADXXXXXXXXXRC 79
           E EK+    DEM+++  G FG  +    +L S A   +A  + + I+ D          C
Sbjct: 17  EQEKVIPSTDEMMERGLGRFGWVEFVQCILVSFAMFFDAQQSFITIYTDEYQTW----HC 72

Query: 80  VAGSGCSAAVGSVCGLRPGEWEWVGGNGASTVSEWGLICGEKYKVGLVQAIFFAGCMIG 138
              + C A   ++C +    W W G    + +S+W L C   +  GL Q+ FF GC+ G
Sbjct: 73  TNPTTC-AWDSNICKIPRSSWSWDGPAHKTVISQWSLECASSFVTGLPQSSFFIGCLFG 130


>Medtr8g039070.1 | organic cation/carnitine transporter, putative |
           HC | chr8:14542715-14544332 | 20130731
          Length = 490

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 9/128 (7%)

Query: 14  LPAAEKKAEVEKICI---DEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADXX 70
           +P +    E EK  I   D +++K    FG       VL ++A   +A  + + I+ D  
Sbjct: 9   VPESHSNIEQEKKPILSWDVIIEKSLSNFGWMDFLQAVLVAVAMFFDAQQSFISIYTDNY 68

Query: 71  XXXXXXXRCVAGSGCSAAVGSVCGLRPGEWEWVGGNGASTVSEWGLICGEKYKVGLVQAI 130
                   C   S C+++   +C L    W W      + +S W L C   +  GL Q+ 
Sbjct: 69  PKW----HCT-NSICTSS-SDICKLPRSSWSWDTHPSNTIISHWNLECASTFITGLPQSS 122

Query: 131 FFAGCMIG 138
           FF GC++G
Sbjct: 123 FFIGCLLG 130


>Medtr8g039190.1 | organic cation/carnitine transporter | HC |
           chr8:14580984-14579013 | 20130731
          Length = 526

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 6/110 (5%)

Query: 29  DEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADXXXXXXXXXRCVAGSGCSAA 88
           D +++K    FG       VL ++A   +A  + + I+ D          C   S C+++
Sbjct: 27  DVIIEKSLSNFGWMDFLQAVLVAVAMFFDAQQSFISIYTDNYPKW----HCT-NSICTSS 81

Query: 89  VGSVCGLRPGEWEWVGGNGASTVSEWGLICGEKYKVGLVQAIFFAGCMIG 138
              +C L    W W      + +S W L C   +  GL Q+ FF GC++G
Sbjct: 82  -SDICKLPRSSWSWDTHPSNTIISHWNLECASTFITGLPQSSFFIGCLLG 130