Miyakogusa Predicted Gene

Lj0g3v0199169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0199169.1 Non Characterized Hit- tr|I1N6H4|I1N6H4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,77.78,3e-17,seg,NULL,TC74084.path1.1
         (61 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g016215.1 | armadillo/beta-catenin-like repeat protein | H...    82   1e-16

>Medtr6g016215.1 | armadillo/beta-catenin-like repeat protein | HC |
            chr6:5896535-5912417 | 20130731
          Length = 2142

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/42 (90%), Positives = 39/42 (92%)

Query: 20   SQREVTLQNTRLILGRVLDRSALGKRKDHKKLVPFVVNIGNP 61
            SQREV+LQNTRL LGRVLDRSALGKRKD KKLVPFV NIGNP
Sbjct: 2101 SQREVSLQNTRLFLGRVLDRSALGKRKDQKKLVPFVANIGNP 2142