Miyakogusa Predicted Gene

Lj0g3v0198949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0198949.1 Non Characterized Hit- tr|B9R6Q7|B9R6Q7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,62.47,0,seg,NULL; Symplekin_C,Symplekin  C-terminal; DUF3453,Protein
of unknown function DUF3453; no
descrip,NODE_56710_length_4705_cov_39.415730.path2.1
         (1339 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g111090.1 | symplekin tight junction protein carboxy-termi...  1942   0.0  
Medtr4g015850.1 | symplekin tight junction protein carboxy-termi...   573   e-163

>Medtr3g111090.1 | symplekin tight junction protein carboxy-terminal
            protein | HC | chr3:51920629-51901963 | 20130731
          Length = 1338

 Score = 1942 bits (5030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 983/1342 (73%), Positives = 1068/1342 (79%), Gaps = 7/1342 (0%)

Query: 1    MAAPPPPKDQFLSFLSSANNHGVLSVKTSSLKQAKXXXXXXXXXXXXXXXXXXXXXXXXX 60
            MAAPPP KDQ LS L++ANNHG +SVKT+SLKQAK                         
Sbjct: 1    MAAPPPTKDQVLSLLAAANNHGDISVKTTSLKQAKDLLLSIDPSLAADLFPYLLELQSSH 60

Query: 61   XXXVRKLLIQIIEEIGFKAAEDSPKLISVLLTFLRDSDVEVVKQSIVSGSNIFCSGFEEL 120
               VRKLLIQIIEEIGF+A + SP LIS LLTFLRD+D  VVKQSI+SG+NIFC+ FEEL
Sbjct: 61   QPLVRKLLIQIIEEIGFRAVQHSPTLISSLLTFLRDTDATVVKQSIISGTNIFCACFEEL 120

Query: 121  VVQFQQCGKVERWLEEIWMWMHRFKDAVFGIALEPGAVGIKLLALKFLETFILLFTSDNS 180
            ++QFQQCGKVERWLEEIWMWM +FK+AVF IALE G+VGIKLLALKFLE F+LLFTSD S
Sbjct: 121  ILQFQQCGKVERWLEEIWMWMFKFKEAVFEIALEGGSVGIKLLALKFLEIFVLLFTSDIS 180

Query: 181  NPDKPATEGVRKAVHISWLVGGHPVLDPVVLMSEANRTLGTLLNLLQSAGSLPGCLTITV 240
            + +K ATEGVR+AV+ISWLVG HPVLDP+VLM+EANRT+G LL LLQ AG+ PGCLTITV
Sbjct: 181  DSEKSATEGVRQAVNISWLVGSHPVLDPMVLMTEANRTIGILLKLLQCAGNTPGCLTITV 240

Query: 241  VNCLAAIARKRPQHYDTILSAMLDFNPNFQTVKGCHVASIQYSLRTTFLGFLRCTYSPXX 300
            VNCLAAIARKR QHYDTILSA+LDF+PN QTVKGCHV SIQYSLRT FLGFLRCTYSP  
Sbjct: 241  VNCLAAIARKRSQHYDTILSALLDFDPNVQTVKGCHVPSIQYSLRTAFLGFLRCTYSPII 300

Query: 301  XXXXXXXXXXXGMNAGDAADQVIRQVDKMIKNGDRSTRDARASKDEVPSTQSPVSGELSR 360
                        MNAGDAADQVIRQVDKMIK+ DR  RDAR +KD+ PS Q PVSGE SR
Sbjct: 301  ESRERLIRSLRAMNAGDAADQVIRQVDKMIKSADRFIRDARVNKDDQPSNQLPVSGESSR 360

Query: 361  KRPVPQDNEQLATGHEAISKRIRSGPDPCLTLSAQINESGKDLXXXXXXXXXXXXLDSDL 420
            KRPVP DNEQLA GHEAI+KRIRSGPD   TL AQ+N+SG+D             L+S+L
Sbjct: 361  KRPVPHDNEQLANGHEAIAKRIRSGPDSDFTLPAQVNDSGRDHSSVNGVSPNVPVLESEL 420

Query: 421  NAVEQMIAVIGALLAEGERGAESLEILISNIHPDLLADIVITNMKHLPKTPPPLARLGNX 480
             AVEQMIAVIGAL+AEGERGA+SLEILIS IHPDLLADIVI NMKHLPK PPPLARL + 
Sbjct: 421  TAVEQMIAVIGALIAEGERGAKSLEILISQIHPDLLADIVIANMKHLPKAPPPLARLESP 480

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXLAVTDQXXXXXXXXXXXXXXXX--XXXXXXNQP 538
                                       L V+ Q                        N P
Sbjct: 481  SVTRPVGSLVSQSHVITTSASMSSVQSLTVSAQAQVSSTTAISAATTSSPSDTSNFSNLP 540

Query: 539  ADSKXXXXXXXXXXXXXXGAISPGGVAASTTDDTGATKLEVDDPVSSNTPVSHPVASTND 598
            ADSK              GAI+PGG A S TDDT AT LE +DPVS   P SH VAST+D
Sbjct: 541  ADSKRDPRRDPRRLDPRRGAITPGGAAVSVTDDTAATHLESEDPVSFIKPASHHVASTDD 600

Query: 599  NTPSDLTMKIKNDDMVSEGPPVSAPDGITPKTEVVERPGEVHQNMEENAFLDPSIPLSDL 658
            +  S+LT+KI+NDDM+SEGPPV  PD ++PKTE +E PG+ HQ ME NA +DP +  +D 
Sbjct: 601  DIQSNLTIKIENDDMISEGPPVPGPDRVSPKTETLEGPGD-HQIMEANASMDPEVYSTDS 659

Query: 659  RDEDISTEKLSDDTGTNGPDSPSMLEFDEFSPDVQVASTSEDTCLELPQLPPYVQQSKEQ 718
            +DE++ST  L DD  TNG DS S+LEFD+FS DVQV+ TSEDTCLELPQLPPY+Q S+EQ
Sbjct: 660  KDENLSTANLLDDNETNGIDSSSILEFDQFSVDVQVSPTSEDTCLELPQLPPYIQLSQEQ 719

Query: 719  ESKVKHMAIMHIIESYKHLHGTDCQQFCMPLLARLVAQIDDDNEIIVMLQKHILEDQWQK 778
            ESKVKHMAI HIIESY HL G DCQQFCMPLLARLVAQID+DN II MLQKHILED W+K
Sbjct: 720  ESKVKHMAISHIIESYNHLQGADCQQFCMPLLARLVAQIDNDNVIITMLQKHILEDHWRK 779

Query: 779  GXXXXXXXXXXXXXXXXXDSDGKSSSSAVLYENFLLGVAKALLEYFPASDKSFSRLLGEA 838
            G                 DS G +SSSAVLY+NFLLGVAK +L+ FPASDKSFS+LLGE 
Sbjct: 780  GHELVLHVLYHLHSLMILDSAGNTSSSAVLYDNFLLGVAKTVLDSFPASDKSFSKLLGEV 839

Query: 839  PFLPESTLKILNDLCYSDVIDHDGRISRDIERVTQGLGAIWGLILGRPQNRQACLEIALK 898
            PFLPES LKIL+DLCYSDV+DHDG+I RDIERVTQGLGAIW LILGRPQNRQ CL IALK
Sbjct: 840  PFLPESALKILDDLCYSDVVDHDGKIIRDIERVTQGLGAIWSLILGRPQNRQGCLGIALK 899

Query: 899  CAVHPQDEIRAKAIRLVTNKLFQLSYISEDVEKFATKMLLSAVDREVLDAVQSRPAEPRA 958
            CAVHPQDEIRAKAIRLVTNKLFQLSYI+EDVEKFATKMLLSAVD EV +A QS P E R 
Sbjct: 900  CAVHPQDEIRAKAIRLVTNKLFQLSYIAEDVEKFATKMLLSAVDHEVSNAAQSGPTEQRT 959

Query: 959  EAQVESHEVSSTSQVSEPTISENDSARVAKPMIQSPSISFS-EAQRFISLFFALCTKKPI 1017
            EAQVES E+S TSQV EP   +ND A VAKP  QS S     EAQR ISLFFALCTKKP 
Sbjct: 960  EAQVESLEISGTSQVKEP---KNDPAGVAKPSSQSVSSISFSEAQRLISLFFALCTKKPS 1016

Query: 1018 LLQIVFDVYGKAPRTVKQAFHRHIPILVRALGQSYSELLPIISDPPEGSENLLTLVLQIL 1077
            LLQIVFDVYG+A RTVKQAFHRHIP LVRALGQSYSELL IISDPP+GSENLLTLVLQIL
Sbjct: 1017 LLQIVFDVYGQASRTVKQAFHRHIPNLVRALGQSYSELLHIISDPPKGSENLLTLVLQIL 1076

Query: 1078 TQDTTPSSDLISTVKHLYETKFKDVTILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALA 1137
            TQDTTPSSDLISTVKHLYETKF+DVTILVPLLSSLSK EVLPIFPRLVDLPLEKFQRALA
Sbjct: 1077 TQDTTPSSDLISTVKHLYETKFRDVTILVPLLSSLSKTEVLPIFPRLVDLPLEKFQRALA 1136

Query: 1138 HILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKAL 1197
            HILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKAL
Sbjct: 1137 HILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKAL 1196

Query: 1198 NQMVDQTPLPLLFMRTVIQSIDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQT 1257
            NQMVDQTPLPLLFMRT+IQ++DAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQT
Sbjct: 1197 NQMVDQTPLPLLFMRTIIQAVDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQT 1256

Query: 1258 QPRSFHVLLQLPPQQLESALNKHANLRAPLASYASQPTVKSSLTRSTLAVLGLANETHVQ 1317
            QPRSFHVLLQLPPQQLESALNKHANLR PLASYA+QPTVKSSL+RSTL VLGLANETHVQ
Sbjct: 1257 QPRSFHVLLQLPPQQLESALNKHANLRGPLASYANQPTVKSSLSRSTLVVLGLANETHVQ 1316

Query: 1318 QHLSTSLHPSEASSSVSGATLT 1339
            QHL TSLH SE S+SVSGATLT
Sbjct: 1317 QHLPTSLHHSETSTSVSGATLT 1338


>Medtr4g015850.1 | symplekin tight junction protein carboxy-terminal
            protein | HC | chr4:4819906-4805018 | 20130731
          Length = 1338

 Score =  573 bits (1478), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 335/710 (47%), Positives = 453/710 (63%), Gaps = 25/710 (3%)

Query: 651  PSIPLSDLRDEDISTEK---LSDDTGTNGPDSPSMLEFDEFSP-----DVQVASTSEDTC 702
            PS+  +D++ ED S E+   L + + +N   S S  + +E SP     DV    +S  T 
Sbjct: 623  PSLASTDMQIEDASQEQATSLDNRSPSNLVPSMSADKSEELSPKAVAPDVNSLVSSTATS 682

Query: 703  LELPQ-------LPPYVQQSKEQESKVKHMAIMHIIESYKHLHGTDCQQFCMPLLARLVA 755
              LP        + P V  + EQ   ++    M II++YK +      +    +LA L  
Sbjct: 683  AVLPSRLVLPKMIAPVVDLADEQRDHLQTSCFMRIIDAYKQISVAGGSKVRFSILAYLGV 742

Query: 756  QIDDDNEIIVMLQKHILED-QWQKGXXXXXXXXXXXXXXXXXDSDGKSSSSAV-LYENFL 813
            +   + +   +LQKHIL D    +G                 + D  SS++A  +YE FL
Sbjct: 743  EFPLELDPWKLLQKHILIDYSGHEGHELTLRVLYRLFGEAEVEPDFFSSTTAASVYETFL 802

Query: 814  LGVAKALLEYFPASDKSFSRLLGEAPFLPESTLKILNDLCY---SDVIDHDGRISRDIER 870
            L VA+AL + FP SDKS S+LLGE+P+LP+S LKIL ++C     D I+ +   + +++R
Sbjct: 803  LTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDKIEKESH-TLNVDR 861

Query: 871  VTQGLGAIWGLILGRPQNRQACLEIALKCAVHPQDEIRAKAIRLVTNKLFQLSYISEDVE 930
            VTQGL A+W LIL RP  R+ CL+IAL+ AVH  +E+R KAIRLV NKL+ LS IS+++E
Sbjct: 862  VTQGLSAVWSLILLRPPIRETCLKIALQSAVHHVEEVRMKAIRLVANKLYPLSSISKEIE 921

Query: 931  KFATKMLLSAVDREVLDAV-QSRPAEPRAEAQVESHEVSSTSQVSEPTISENDSARVAKP 989
             FA +M+ S +  +  +A  +   A+ +    VE   ++    +S  T   +D+ + +  
Sbjct: 922  DFAKEMVFSVMSSDASEATDEGSVADSQKGPDVE-KVINEPLSLSGSTKDVSDNRQSSTS 980

Query: 990  MIQSPSISFSEAQRFISLFFALCTKKPILLQIVFDVYGKAPRTVKQAFHRHIPILVRALG 1049
               SP +S SEAQR +SLFFALCTKK  L + +F +Y    +  KQA HR IPILVR LG
Sbjct: 981  EGTSP-LSVSEAQRGMSLFFALCTKKHSLFREIFVIYRSTSKAAKQAIHRQIPILVRTLG 1039

Query: 1050 QSYSELLPIISDPPEGSENLLTLVLQILTQDTTPSSDLISTVKHLYETKFKDVTILVPLL 1109
             S S+LL IISDPP GSENLL  VL  LT  T PS DLI  VK L+++K KD  IL+P+L
Sbjct: 1040 SS-SDLLEIISDPPNGSENLLMQVLHTLTDGTIPSKDLIVAVKRLHDSKLKDAEILIPIL 1098

Query: 1110 SSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGL 1169
              L K EV+ +FP +V+LP EKFQ AL  ILQGS+ +GP LTP EVL+AIHGI PE+DG+
Sbjct: 1099 PFLLKDEVMAVFPNIVNLPPEKFQGALGRILQGSSQSGPVLTPAEVLIAIHGIDPERDGI 1158

Query: 1170 ALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQSIDAFPALVDFVM 1229
             LKK+TDAC+ACFEQR  FTQ+VLAK LNQ+V+Q PLPLLFMRTV+Q+I AFP LVDF+M
Sbjct: 1159 PLKKVTDACNACFEQRQTFTQEVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPTLVDFIM 1218

Query: 1230 EILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLESALNKHANLRAPLAS 1289
             IL++LV KQVW+ PKLWVGFLKC+  T+P+SF VLLQLPP QLE+ALN+ A L+APL +
Sbjct: 1219 GILARLVKKQVWKYPKLWVGFLKCLQLTKPQSFGVLLQLPPPQLEAALNRIAALKAPLIA 1278

Query: 1290 YASQPTVKSSLTRSTLAVLGLANETHVQQHLSTSLHPSEASSSVSGATLT 1339
            +ASQP ++SSL RS L VLG+ +++ V     TS   +  +S+    T+T
Sbjct: 1279 HASQPDIQSSLPRSVLVVLGIVSDSQVPSQPQTSQTQTGETSNSDKDTMT 1328



 Score =  211 bits (536), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/417 (33%), Positives = 213/417 (51%), Gaps = 8/417 (1%)

Query: 64  VRKLLIQIIEEIGFKAAEDSPKLISVLLTFLRDSDVEVVKQSIVSGSNIFCSGFEELVVQ 123
           VRK + ++I EIG K  E  P ++ VL+  L D    VV+Q+I+ G  +F S  E++ +Q
Sbjct: 67  VRKFVTEMIGEIGLKNTEFLPDIVPVLIDVLDDDTPAVVRQAILCGIRLFRSTLEKIAIQ 126

Query: 124 FQQCGKVERWLEEIWMWMHRFKDAVFGIALEPGAVGIKLLALKFLETFILLFTSDNSNPD 183
                 ++  +E  W WM +FKD V+ IA + G  G KLLALKF+E  I L+T D +   
Sbjct: 127 GLFSSDLDSAVESAWEWMVKFKDKVYSIAFQNGRGGAKLLALKFVEAVIRLYTLDPNGSA 186

Query: 184 KPAT-EGVRKAVHISWLVGGHPVLDPVVLMSEANRTLGTLLNLLQ--SAGSLPGCLTITV 240
           +P + +G R   +ISWL   HPVL+   +  EA+ +LG LL+ L+  +  SL   + I +
Sbjct: 187 EPNSHQGKRPVFNISWLRRDHPVLNIGDMSMEASNSLGLLLDQLRFPTVKSLGNSVIIVL 246

Query: 241 VNCLAAIARKRPQHYDTILSAMLDFNPNFQTVKGCHVASIQYSLRTTFLGFLRCTYSPXX 300
           +  L+AIA +RP  Y  IL  +L   P+   V G  V++   +L+  FL    CT+    
Sbjct: 247 IKSLSAIAIERPAFYGRILPVLLSLEPSTSVVNGVCVSAAHLALKKAFLTCTECTHPSAA 306

Query: 301 XXXXXXXXXXXGMNAGDAADQVIRQVDKMIKNGDRSTRDARAS--KDEVPSTQSPVSG-- 356
                       M +   ADQV   +    ++  +   D +    K+E  +  S  SG  
Sbjct: 307 PWRDRLAGALKEMQSEGKADQVFHPISASNESILQREEDYQPVIIKEEDTAGSSFDSGHV 366

Query: 357 ELSRKRPVPQDNEQLATGHEAISKRIRSGPDPCLTLSAQINESGKDLXXXX-XXXXXXXX 415
            L RKR   Q+   LA   +   KR+R+  D   T   +++E   +              
Sbjct: 367 NLGRKRSGSQNGSDLAEDADVPGKRVRTTTDGLKTPKMELDECTANTQNDTPSTVPAFSK 426

Query: 416 LDSDLNAVEQMIAVIGALLAEGERGAESLEILISNIHPDLLADIVITNMKHLPKTPP 472
            D D   V+Q++A+ GAL+A+GE    SLEILISNI  DLLA++V+ NM++LP   P
Sbjct: 427 GDVDNGPVQQLVAMFGALVAQGEMAVASLEILISNISADLLAEVVMANMRYLPPNCP 483