Miyakogusa Predicted Gene

Lj0g3v0198919.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0198919.1 tr|Q50HW1|Q50HW1_SACOF Glycosyltransferase
OS=Saccharum officinarum GN=pglcat4 PE=2 SV=1,32.73,9e-19,seg,NULL;
Glyco_transf_43,Glycosyl transferase, family 43;
BETA-1,3-GLUCURONYLTRANSFERASE,NULL;
GALA,NODE_62093_length_1288_cov_87.358696.path2.1
         (254 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g111060.1 | beta-1,4-xylosyltransferase, putative | HC | c...   278   5e-75
Medtr3g110142.4 | beta-1,4-xylosyltransferase, putative | HC | c...   132   2e-31
Medtr3g110142.1 | beta-1,4-xylosyltransferase, putative | HC | c...   132   2e-31
Medtr3g110142.3 | beta-1,4-xylosyltransferase, putative | HC | c...   132   3e-31
Medtr3g110142.2 | beta-1,4-xylosyltransferase, putative | HC | c...   132   3e-31
Medtr5g016600.1 | beta-1,4-xylosyltransferase, putative | HC | c...    57   2e-08
Medtr4g094912.1 | beta-1,4-xylosyltransferase, putative | HC | c...    49   5e-06

>Medtr3g111060.1 | beta-1,4-xylosyltransferase, putative | HC |
           chr3:51891978-51896004 | 20130731
          Length = 441

 Score =  278 bits (710), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 152/296 (51%), Positives = 185/296 (62%), Gaps = 42/296 (14%)

Query: 1   MASFRRTLSPAYHDRQHLNGXXXX-XXXXXXXXXXXXNTKYSALAAAFRRVVGDILMRRN 59
           MASFRRTLSPAYHDR ++NG                 NT YSA+A++F+R++G + MRR 
Sbjct: 1   MASFRRTLSPAYHDRHYINGDGTAFSPSSPSHKLPSSNTNYSAIASSFQRLIGGVFMRRY 60

Query: 60  SRKGQWRRAVYRCVLCFFVGFLLGMFPFGHXX----XXXXXXXXXPVSFEI-KPPNSG-- 112
           +RKGQWR+  +RCVLCFFVGFLLGMFPFG+                ++F+I K P S   
Sbjct: 61  NRKGQWRKVAFRCVLCFFVGFLLGMFPFGNLIHEIPQQQRENNDNIIAFDINKTPQSDAK 120

Query: 113 --------------------------EMKRFVIDPVV---SLSAEKQSQSLVA-----VE 138
                                     + K F+I+ V    +++AEK +++L        E
Sbjct: 121 SILNNRVLKKHVSVGGGDADDEDEDKKGKGFMIEQVSLSSNMNAEKDNENLKERELGESE 180

Query: 139 RFDFVPRKLLIVVTPTYNRGFQSYFLNRLGQXXXXXXXXXXXXXXEMKAASLETAEVLRK 198
           + D V RK LI+VTPTYNR FQSYFLNRLGQ              EM +AS+ETAE+LRK
Sbjct: 181 KIDIVARKQLIIVTPTYNRSFQSYFLNRLGQVLRLVPPPLLWVVVEMNSASMETAELLRK 240

Query: 199 TGVMYRHLVCPENSTDVKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLDLFE 254
           TGVMYRHLVC +NSTDVKDRGVHQRN ALEHIE H+LDGIVYFADDDNVYSLDLF+
Sbjct: 241 TGVMYRHLVCTKNSTDVKDRGVHQRNKALEHIEHHKLDGIVYFADDDNVYSLDLFQ 296


>Medtr3g110142.4 | beta-1,4-xylosyltransferase, putative | HC |
           chr3:51104209-51107598 | 20130731
          Length = 438

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 21/220 (9%)

Query: 56  MRRNSRKGQ-WRRAVYRCVLCFFVGFLLGMFPFGHXXXXXXXXX-XXPVSFEIKPPNSGE 113
           + ++  KGQ WR+ ++   +CF VG  +G+ P                 SFE+K   S E
Sbjct: 71  IEKSKPKGQLWRKVLFHFFICFMVGVSIGLIPLASTNLSLNLISRNQGFSFEVKKFQSLE 130

Query: 114 MKRF----VIDPVV----SLSAEKQSQSLVAVERFDFV-----------PRKLLIVVTPT 154
             +     ++D VV    +L +  Q Q L     ++              +KL I+VTPT
Sbjct: 131 NVKINDTPLVDEVVKFDATLISAVQEQELTDGVTYNISDSQFGDESYLESQKLFIIVTPT 190

Query: 155 YNRGFQSYFLNRLGQXXXXXXXXXXXXXXEMKAASLETAEVLRKTGVMYRHLVCPENSTD 214
           YN  +Q+Y+L+ L Q              EM + S ETA++L  +G+MYRHL+C  N T+
Sbjct: 191 YNHLYQAYYLHHLSQTLKLVSPPLLWIVVEMNSQSDETADILTSSGIMYRHLICKMNLTN 250

Query: 215 VKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLDLFE 254
              R +  RN A+ HIE HRL+GIVYFA++DN+YS++LF+
Sbjct: 251 TSHRSILMRNVAIAHIETHRLNGIVYFANNDNIYSVELFQ 290


>Medtr3g110142.1 | beta-1,4-xylosyltransferase, putative | HC |
           chr3:51104209-51107598 | 20130731
          Length = 438

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 21/220 (9%)

Query: 56  MRRNSRKGQ-WRRAVYRCVLCFFVGFLLGMFPFGHXXXXXXXXX-XXPVSFEIKPPNSGE 113
           + ++  KGQ WR+ ++   +CF VG  +G+ P                 SFE+K   S E
Sbjct: 71  IEKSKPKGQLWRKVLFHFFICFMVGVSIGLIPLASTNLSLNLISRNQGFSFEVKKFQSLE 130

Query: 114 MKRF----VIDPVV----SLSAEKQSQSLVAVERFDFV-----------PRKLLIVVTPT 154
             +     ++D VV    +L +  Q Q L     ++              +KL I+VTPT
Sbjct: 131 NVKINDTPLVDEVVKFDATLISAVQEQELTDGVTYNISDSQFGDESYLESQKLFIIVTPT 190

Query: 155 YNRGFQSYFLNRLGQXXXXXXXXXXXXXXEMKAASLETAEVLRKTGVMYRHLVCPENSTD 214
           YN  +Q+Y+L+ L Q              EM + S ETA++L  +G+MYRHL+C  N T+
Sbjct: 191 YNHLYQAYYLHHLSQTLKLVSPPLLWIVVEMNSQSDETADILTSSGIMYRHLICKMNLTN 250

Query: 215 VKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLDLFE 254
              R +  RN A+ HIE HRL+GIVYFA++DN+YS++LF+
Sbjct: 251 TSHRSILMRNVAIAHIETHRLNGIVYFANNDNIYSVELFQ 290


>Medtr3g110142.3 | beta-1,4-xylosyltransferase, putative | HC |
           chr3:51104211-51107592 | 20130731
          Length = 394

 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 21/220 (9%)

Query: 56  MRRNSRKGQ-WRRAVYRCVLCFFVGFLLGMFPFGHXXXXXXXXX-XXPVSFEIKPPNSGE 113
           + ++  KGQ WR+ ++   +CF VG  +G+ P                 SFE+K   S E
Sbjct: 71  IEKSKPKGQLWRKVLFHFFICFMVGVSIGLIPLASTNLSLNLISRNQGFSFEVKKFQSLE 130

Query: 114 MKRF----VIDPVV----SLSAEKQSQSLVAVERFDFV-----------PRKLLIVVTPT 154
             +     ++D VV    +L +  Q Q L     ++              +KL I+VTPT
Sbjct: 131 NVKINDTPLVDEVVKFDATLISAVQEQELTDGVTYNISDSQFGDESYLESQKLFIIVTPT 190

Query: 155 YNRGFQSYFLNRLGQXXXXXXXXXXXXXXEMKAASLETAEVLRKTGVMYRHLVCPENSTD 214
           YN  +Q+Y+L+ L Q              EM + S ETA++L  +G+MYRHL+C  N T+
Sbjct: 191 YNHLYQAYYLHHLSQTLKLVSPPLLWIVVEMNSQSDETADILTSSGIMYRHLICKMNLTN 250

Query: 215 VKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLDLFE 254
              R +  RN A+ HIE HRL+GIVYFA++DN+YS++LF+
Sbjct: 251 TSHRSILMRNVAIAHIETHRLNGIVYFANNDNIYSVELFQ 290


>Medtr3g110142.2 | beta-1,4-xylosyltransferase, putative | HC |
           chr3:51104211-51107592 | 20130731
          Length = 394

 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 21/220 (9%)

Query: 56  MRRNSRKGQ-WRRAVYRCVLCFFVGFLLGMFPFGHXXXXXXXXX-XXPVSFEIKPPNSGE 113
           + ++  KGQ WR+ ++   +CF VG  +G+ P                 SFE+K   S E
Sbjct: 71  IEKSKPKGQLWRKVLFHFFICFMVGVSIGLIPLASTNLSLNLISRNQGFSFEVKKFQSLE 130

Query: 114 MKRF----VIDPVV----SLSAEKQSQSLVAVERFDFV-----------PRKLLIVVTPT 154
             +     ++D VV    +L +  Q Q L     ++              +KL I+VTPT
Sbjct: 131 NVKINDTPLVDEVVKFDATLISAVQEQELTDGVTYNISDSQFGDESYLESQKLFIIVTPT 190

Query: 155 YNRGFQSYFLNRLGQXXXXXXXXXXXXXXEMKAASLETAEVLRKTGVMYRHLVCPENSTD 214
           YN  +Q+Y+L+ L Q              EM + S ETA++L  +G+MYRHL+C  N T+
Sbjct: 191 YNHLYQAYYLHHLSQTLKLVSPPLLWIVVEMNSQSDETADILTSSGIMYRHLICKMNLTN 250

Query: 215 VKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLDLFE 254
              R +  RN A+ HIE HRL+GIVYFA++DN+YS++LF+
Sbjct: 251 TSHRSILMRNVAIAHIETHRLNGIVYFANNDNIYSVELFQ 290


>Medtr5g016600.1 | beta-1,4-xylosyltransferase, putative | HC |
           chr5:5971526-5967013 | 20130731
          Length = 504

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 144 PRKLLIVVTPTYNRGFQSYFLNRLGQXXXXXXXXXXXXXXEMKAASLETAEVLRKTGVMY 203
           PRK+ IVVTPTY R FQ+  L  +                E    + ETA ++ K+G+  
Sbjct: 150 PRKV-IVVTPTYVRTFQAMHLTGVMHSLMLVPYDLIWIVVEAGGVTNETASIIGKSGLKI 208

Query: 204 RHL----VCPENSTDVKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLDLFE 254
            H+      P    D        R  AL  + + RLDGIV FADD N+++++LF+
Sbjct: 209 IHVGFNQKMPSLWEDRHKVESLMRLHALRIVRKERLDGIVMFADDSNMHNMELFD 263


>Medtr4g094912.1 | beta-1,4-xylosyltransferase, putative | HC |
           chr4:39271094-39277680 | 20130731
          Length = 500

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 5/114 (4%)

Query: 146 KLLIVVTPTYNRGFQSYFLNRLGQXXXXXXXXXXXXXXEMKAASLETAEVLRKTGVMYRH 205
           + +I VTPTY R FQ   L  +                E    + ETA ++  +G+    
Sbjct: 156 RTVIAVTPTYVRTFQKLHLIGVMHSLMLVPYDLVWIVVEAGGVTNETASIVANSGLRRII 215

Query: 206 LVCPENSTDVKDRGVHQ-----RNTALEHIERHRLDGIVYFADDDNVYSLDLFE 254
            +       +   G H+     R  AL  + + +LDGIV FADD N++S++LF+
Sbjct: 216 HIGFNQRIPISWEGRHKLEARMRLHALRIVRKEKLDGIVMFADDSNMHSMELFD 269