Miyakogusa Predicted Gene
- Lj0g3v0197339.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0197339.1 gi|27464258|gb|AF521173.1|.path1.1
(343 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g464410.1 | C-type cytochrome biogenesis protein | HC | ch... 489 e-138
>Medtr8g464410.1 | C-type cytochrome biogenesis protein | HC |
chr8:22761973-22757927 | 20130731
Length = 384
Score = 489 bits (1258), Expect = e-138, Method: Compositional matrix adjust.
Identities = 255/331 (77%), Positives = 273/331 (82%), Gaps = 6/331 (1%)
Query: 13 LQPCRIANCNLDRHGRHVVPINVHKKASEPENCLQSDWKSNGNNIRTFIGAMTAANLVXX 72
LQ CR ++ HG+ + I K +E ENCL+S K NGN+I TFIG +TAA LV
Sbjct: 60 LQSCR----TINSHGKRI--IATKKVKTEHENCLRSKSKINGNSIMTFIGGLTAAQLVAP 113
Query: 73 XXXXXXXXXSFYDLADGSINDWFGGILYSAGQQANEAVLDQLSSLSFTSLAVIFGAGLVT 132
+ LADG I DWFGGIL+SAGQQANEAVLDQLSSLSFTSLAVI+GAGLVT
Sbjct: 114 VTAKAEIVAPVFTLADGGIGDWFGGILFSAGQQANEAVLDQLSSLSFTSLAVIYGAGLVT 173
Query: 133 SLSPCTLSVLPLTLGYIGAFGSGKSRAEVIGDSIXXXXXXXXXXXXXXXXXXFAGKAYGQ 192
SLSPCTLSVLPLTLGYIGAFGSGKSRA+VIGDSI FAGKAYGQ
Sbjct: 174 SLSPCTLSVLPLTLGYIGAFGSGKSRAQVIGDSIAFSLGLATTLALLGVGASFAGKAYGQ 233
Query: 193 IGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDSFDPRSVAANLPSSVQAYLAGLTFALA 252
IGQGLP+AASGLAVIMGLNLLEIIELQLPSFFDSFDP+S+AAN PSSVQAYLAGLTFALA
Sbjct: 234 IGQGLPVAASGLAVIMGLNLLEIIELQLPSFFDSFDPKSLAANFPSSVQAYLAGLTFALA 293
Query: 253 ASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYIAPLLLAASFAGALQSLLSFRKYS 312
ASPCSTPVLATLLGYVAASK+PVIGGSLLLTYTTGYI+PLLLAASFAGALQSLLSFRKYS
Sbjct: 294 ASPCSTPVLATLLGYVAASKNPVIGGSLLLTYTTGYISPLLLAASFAGALQSLLSFRKYS 353
Query: 313 AWINPISGAMLLGGGVYTFLDKLFPATTMAM 343
AWINPISGAMLLGGGVYTFLD+LFPA TMAM
Sbjct: 354 AWINPISGAMLLGGGVYTFLDRLFPAATMAM 384