Miyakogusa Predicted Gene

Lj0g3v0197309.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0197309.1 tr|D4P3E6|D4P3E6_WHEAT ARF GTPase activator
(Fragment) OS=Triticum aestivum PE=2
SV=1,54.78,3e-19,seg,NULL,CUFF.12543.1
         (185 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g080950.1 | ARF GTPase activator | HC | chr2:33913419-3391...   115   2e-26
Medtr2g080950.2 | ARF GTPase activator | HC | chr2:33913419-3391...   115   2e-26
Medtr2g080950.3 | ARF GTPase activator | HC | chr2:33915761-3391...   115   2e-26
Medtr8g464390.1 | ARF GTPase activator | HC | chr8:22748074-2275...   101   5e-22
Medtr8g464390.2 | ARF GTPase activator | HC | chr8:22748718-2275...   100   6e-22

>Medtr2g080950.1 | ARF GTPase activator | HC |
           chr2:33913419-33919135 | 20130731
          Length = 474

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 76/139 (54%)

Query: 1   MLSMDDPSEKSSGPADATADDNNWAGFQSAAETSXXXXXXXXXXXXXXXRPTSGIEDLFK 60
           +LSMDD +E  S    ATADD NWAGFQSAAE S                   G+EDLFK
Sbjct: 239 LLSMDDTNENGSKAPGATADDINWAGFQSAAEMSTAEKTGPPNAVESTPLSAPGVEDLFK 298

Query: 61  DSPSITPSLASEKPQKDVKNDIMSLFEKTNMVSPFXXXXXXXXXXXXXXXXXXXXXXKSA 120
           DS S+TPSL   KPQKDVKNDIMSLFEK+N+VSPF                      KS 
Sbjct: 299 DSFSVTPSLTPVKPQKDVKNDIMSLFEKSNIVSPFSMHQQQLAMLAQQQSLLMAAAAKST 358

Query: 121 GGDSKNSSSVQQPRANIPI 139
           G D K  + +QQP  N+ +
Sbjct: 359 GVDLKYPTGMQQPSPNVSV 377


>Medtr2g080950.2 | ARF GTPase activator | HC |
           chr2:33913419-33919135 | 20130731
          Length = 423

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 76/139 (54%)

Query: 1   MLSMDDPSEKSSGPADATADDNNWAGFQSAAETSXXXXXXXXXXXXXXXRPTSGIEDLFK 60
           +LSMDD +E  S    ATADD NWAGFQSAAE S                   G+EDLFK
Sbjct: 188 LLSMDDTNENGSKAPGATADDINWAGFQSAAEMSTAEKTGPPNAVESTPLSAPGVEDLFK 247

Query: 61  DSPSITPSLASEKPQKDVKNDIMSLFEKTNMVSPFXXXXXXXXXXXXXXXXXXXXXXKSA 120
           DS S+TPSL   KPQKDVKNDIMSLFEK+N+VSPF                      KS 
Sbjct: 248 DSFSVTPSLTPVKPQKDVKNDIMSLFEKSNIVSPFSMHQQQLAMLAQQQSLLMAAAAKST 307

Query: 121 GGDSKNSSSVQQPRANIPI 139
           G D K  + +QQP  N+ +
Sbjct: 308 GVDLKYPTGMQQPSPNVSV 326


>Medtr2g080950.3 | ARF GTPase activator | HC |
           chr2:33915761-33918745 | 20130731
          Length = 388

 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 76/139 (54%)

Query: 1   MLSMDDPSEKSSGPADATADDNNWAGFQSAAETSXXXXXXXXXXXXXXXRPTSGIEDLFK 60
           +LSMDD +E  S    ATADD NWAGFQSAAE S                   G+EDLFK
Sbjct: 153 LLSMDDTNENGSKAPGATADDINWAGFQSAAEMSTAEKTGPPNAVESTPLSAPGVEDLFK 212

Query: 61  DSPSITPSLASEKPQKDVKNDIMSLFEKTNMVSPFXXXXXXXXXXXXXXXXXXXXXXKSA 120
           DS S+TPSL   KPQKDVKNDIMSLFEK+N+VSPF                      KS 
Sbjct: 213 DSFSVTPSLTPVKPQKDVKNDIMSLFEKSNIVSPFSMHQQQLAMLAQQQSLLMAAAAKST 272

Query: 121 GGDSKNSSSVQQPRANIPI 139
           G D K  + +QQP  N+ +
Sbjct: 273 GVDLKYPTGMQQPSPNVSV 291


>Medtr8g464390.1 | ARF GTPase activator | HC |
           chr8:22748074-22755468 | 20130731
          Length = 467

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/143 (52%), Positives = 83/143 (58%), Gaps = 4/143 (2%)

Query: 1   MLSMDDPSEK-SSGPADATADDNNWAGFQSAAETSXXXXXXXXXXXXXXXRPTSGIEDLF 59
           MLSMDDP+EK S        DDNNWAGFQSAAETS               +PTSGIEDLF
Sbjct: 227 MLSMDDPNEKGSDAADATADDDNNWAGFQSAAETSTAEKTDPRKSVESTPQPTSGIEDLF 286

Query: 60  KDSPSITPSLASEKPQKDVKNDIMSLFEK-TNMVSPFXXXXXXXXXXXXXXX--XXXXXX 116
            DS S+TPS + EKPQKDVKNDIMSLFEK  N+VSPF                       
Sbjct: 287 NDSSSVTPSSSLEKPQKDVKNDIMSLFEKNNNIVSPFAMHQQQLAMLAQQQSLLMAAAAA 346

Query: 117 XKSAGGDSKNSSSVQQPRANIPI 139
            KSA GD K  ++VQQP +NIP 
Sbjct: 347 AKSASGDVKYPANVQQPGSNIPF 369


>Medtr8g464390.2 | ARF GTPase activator | HC |
           chr8:22748718-22755468 | 20130731
          Length = 416

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/143 (52%), Positives = 83/143 (58%), Gaps = 4/143 (2%)

Query: 1   MLSMDDPSEK-SSGPADATADDNNWAGFQSAAETSXXXXXXXXXXXXXXXRPTSGIEDLF 59
           MLSMDDP+EK S        DDNNWAGFQSAAETS               +PTSGIEDLF
Sbjct: 176 MLSMDDPNEKGSDAADATADDDNNWAGFQSAAETSTAEKTDPRKSVESTPQPTSGIEDLF 235

Query: 60  KDSPSITPSLASEKPQKDVKNDIMSLFEK-TNMVSPFXXXXXXXXXXXXXXX--XXXXXX 116
            DS S+TPS + EKPQKDVKNDIMSLFEK  N+VSPF                       
Sbjct: 236 NDSSSVTPSSSLEKPQKDVKNDIMSLFEKNNNIVSPFAMHQQQLAMLAQQQSLLMAAAAA 295

Query: 117 XKSAGGDSKNSSSVQQPRANIPI 139
            KSA GD K  ++VQQP +NIP 
Sbjct: 296 AKSASGDVKYPANVQQPGSNIPF 318