Miyakogusa Predicted Gene
- Lj0g3v0197239.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0197239.1 tr|G7J2M9|G7J2M9_MEDTR Octicosapeptide/Phox/Bem1p
domain-containing protein OS=Medicago truncatula
G,48.48,0.0000000000001,no description,Aldolase-type TIM barrel;
CBS,Cystathionine beta-synthase, core; OS12G0169400
PROTEIN,CUFF.12487.1
(167 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g094780.1 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain pr... 321 2e-88
Medtr3g097010.3 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain pr... 262 1e-70
Medtr3g097010.1 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain pr... 262 1e-70
Medtr3g097010.2 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain pr... 191 2e-49
Medtr8g096850.1 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain pr... 190 6e-49
Medtr3g099100.1 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain pr... 178 2e-45
Medtr3g111940.1 | cystathionine beta-synthase (CBS) family prote... 66 1e-11
Medtr3g111940.2 | cystathionine beta-synthase (CBS) family prote... 66 1e-11
Medtr3g111940.3 | cystathionine beta-synthase (CBS) family prote... 66 1e-11
Medtr5g076080.2 | cystathionine beta-synthase (CBS) family prote... 57 1e-08
Medtr5g076080.3 | cystathionine beta-synthase (CBS) family prote... 57 1e-08
Medtr5g076080.1 | cystathionine beta-synthase (CBS) family prote... 56 2e-08
>Medtr8g094780.1 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain
protein | HC | chr8:39584003-39594249 | 20130731
Length = 534
Score = 321 bits (823), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/167 (92%), Positives = 164/167 (98%)
Query: 1 MEKAAEQGSAIAAAVEGAERQRGSNASAPNALIETLRERMFKPTLSTIIGDNTKAAIASA 60
MEKAAEQGSAIAAAVEGAERQRGSNASAPNAL++TLRER+F+P+LST+I +NTK AIASA
Sbjct: 172 MEKAAEQGSAIAAAVEGAERQRGSNASAPNALLDTLRERIFRPSLSTLISENTKVAIASA 231
Query: 61 ADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTP 120
ADPVYVAAKKM+ELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTP
Sbjct: 232 ADPVYVAAKKMRELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTP 291
Query: 121 NPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
NP+CATLDTTILDALHMMHDGKFLHLPVVDR GYVAACVDVLQITHA
Sbjct: 292 NPDCATLDTTILDALHMMHDGKFLHLPVVDRHGYVAACVDVLQITHA 338
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Query: 53 TKAAIASAADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELT 112
+KA S V A ++M RV+ AV+++ + + GI+T KDI RV+A+ L P+ T
Sbjct: 55 SKALTISEGTSVSDACRRMAARRVD-AVLLTDANALLSGIMTDKDIATRVIAEGLRPDQT 113
Query: 113 LVEKVMTPNPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQ 163
+V KVMT NP T DT +DAL M GKF HLPVV+ +G V A +D+ +
Sbjct: 114 MVAKVMTRNPLFVTSDTLAIDALQKMVQGKFRHLPVVE-NGEVIAILDITK 163
>Medtr3g097010.3 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain
protein | HC | chr3:44432540-44439599 | 20130731
Length = 458
Score = 262 bits (670), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/168 (77%), Positives = 149/168 (88%), Gaps = 8/168 (4%)
Query: 1 MEKAAEQGSAIAAA-VEGAERQRGSNASAPNALIETLRERMFKPTLSTIIGDNTKAAIAS 59
+EKA++QGSAIAAA VEG E QR APNA I+TLRERMFKP+LSTI+G+NTK AI S
Sbjct: 100 VEKASQQGSAIAAAAVEGVEHQR-----APNAFIDTLRERMFKPSLSTILGENTKVAITS 154
Query: 60 AADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMT 119
A+DPV+VAAK+MQELRV+S+VIV+ KIQGILTSKDILMRV+A NLSPE TLVEKVMT
Sbjct: 155 ASDPVHVAAKRMQELRVSSSVIVT--ENKIQGILTSKDILMRVMAPNLSPESTLVEKVMT 212
Query: 120 PNPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
PNP+CATL+TTI+DALHMMHDGKFLHLPVVD+DG V ACVDVLQITHA
Sbjct: 213 PNPQCATLETTIIDALHMMHDGKFLHLPVVDKDGNVVACVDVLQITHA 260
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 79 AVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECATLDTTILDALHMM 138
AV+++ S + GILT KD+ RVVA+ LSP+ T V KVMT NP T DT +DAL M
Sbjct: 8 AVLLTDSSALLSGILTDKDVATRVVAEGLSPDETHVSKVMTRNPIFVTSDTLAIDALQKM 67
Query: 139 HDGKFLHLPVVDRDGYVAACVDV 161
GKF HLPVV+ +G V A +D+
Sbjct: 68 IQGKFRHLPVVE-NGEVIAILDI 89
>Medtr3g097010.1 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain
protein | HC | chr3:44432172-44439603 | 20130731
Length = 519
Score = 262 bits (669), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/168 (77%), Positives = 150/168 (89%), Gaps = 8/168 (4%)
Query: 1 MEKAAEQGSAIAAA-VEGAERQRGSNASAPNALIETLRERMFKPTLSTIIGDNTKAAIAS 59
+EKA++QGSAIAAA VEG E QR APNA I+TLRERMFKP+LSTI+G+NTK AI S
Sbjct: 161 VEKASQQGSAIAAAAVEGVEHQR-----APNAFIDTLRERMFKPSLSTILGENTKVAITS 215
Query: 60 AADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMT 119
A+DPV+VAAK+MQELRV+S+VIV+ + KIQGILTSKDILMRV+A NLSPE TLVEKVMT
Sbjct: 216 ASDPVHVAAKRMQELRVSSSVIVTEN--KIQGILTSKDILMRVMAPNLSPESTLVEKVMT 273
Query: 120 PNPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
PNP+CATL+TTI+DALHMMHDGKFLHLPVVD+DG V ACVDVLQITHA
Sbjct: 274 PNPQCATLETTIIDALHMMHDGKFLHLPVVDKDGNVVACVDVLQITHA 321
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Query: 67 AAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECAT 126
A ++M RV+ AV+++ S + GILT KD+ RVVA+ LSP+ T V KVMT NP T
Sbjct: 58 ACRRMAARRVD-AVLLTDSSALLSGILTDKDVATRVVAEGLSPDETHVSKVMTRNPIFVT 116
Query: 127 LDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQ 163
DT +DAL M GKF HLPVV+ +G V A +D+ +
Sbjct: 117 SDTLAIDALQKMIQGKFRHLPVVE-NGEVIAILDITK 152
>Medtr3g097010.2 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain
protein | HC | chr3:44432365-44439172 | 20130731
Length = 481
Score = 191 bits (486), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/168 (60%), Positives = 114/168 (67%), Gaps = 46/168 (27%)
Query: 1 MEKAAEQGSAIAAA-VEGAERQRGSNASAPNALIETLRERMFKPTLSTIIGDNTKAAIAS 59
+EKA++QGSAIAAA VEG E QR APNA I+TLRERMFKP+LSTI+G+NT
Sbjct: 161 VEKASQQGSAIAAAAVEGVEHQR-----APNAFIDTLRERMFKPSLSTILGENTN----- 210
Query: 60 AADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMT 119
SKDILMRV+A NLSPE TLVEKVMT
Sbjct: 211 -----------------------------------SKDILMRVMAPNLSPESTLVEKVMT 235
Query: 120 PNPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
PNP+CATL+TTI+DALHMMHDGKFLHLPVVD+DG V ACVDVLQITHA
Sbjct: 236 PNPQCATLETTIIDALHMMHDGKFLHLPVVDKDGNVVACVDVLQITHA 283
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Query: 67 AAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECAT 126
A ++M RV+ AV+++ S + GILT KD+ RVVA+ LSP+ T V KVMT NP T
Sbjct: 58 ACRRMAARRVD-AVLLTDSSALLSGILTDKDVATRVVAEGLSPDETHVSKVMTRNPIFVT 116
Query: 127 LDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQ 163
DT +DAL M GKF HLPVV+ +G V A +D+ +
Sbjct: 117 SDTLAIDALQKMIQGKFRHLPVVE-NGEVIAILDITK 152
>Medtr8g096850.1 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain
protein | HC | chr8:40652006-40657772 | 20130731
Length = 534
Score = 190 bits (482), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/168 (61%), Positives = 127/168 (75%), Gaps = 3/168 (1%)
Query: 1 MEKAAEQGSAIAAAVEGAERQRGSNASAPNA-LIETLRERMFKPTLSTIIGDNTKAAIAS 59
ME+AAE+G AIAAAVEG ++ G++AS N+ I+TLRE++FKP+LSTII +N+K S
Sbjct: 165 MERAAEKGKAIAAAVEGIDKHWGASASGSNSSFIDTLREQIFKPSLSTIIPENSKVVTVS 224
Query: 60 AADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMT 119
D V KKM ELR ++A++ K GILTSKDILMRV+AQNLS TLVE VMT
Sbjct: 225 PTDTVLTTTKKMLELRASAAIVTV--DDKPCGILTSKDILMRVIAQNLSASSTLVETVMT 282
Query: 120 PNPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
NPECA +DT I+DALH+MH+GKFLHLPVVDRDG V A VDV+ ITHA
Sbjct: 283 ANPECAIIDTPIVDALHIMHNGKFLHLPVVDRDGIVVATVDVINITHA 330
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 39 RMFKPTLSTIIGDNT-------KAAIASAADPVYVAAKKMQELRVNSAVIVSLSGTKIQG 91
R F P T G+ T KA VY A ++M RV+ A++++ S + G
Sbjct: 27 RPFHPMRPTTTGERTVKSLRLSKALTVPETTTVYEACRRMAVRRVD-ALLLTDSNALLCG 85
Query: 92 ILTSKDILMRVVAQNLSPELTLVEKVMTPNPECATLDTTILDALHMMHDGKFLHLPVVDR 151
ILT KDIL RV+A+ ++ E T KVMT NP DT ++AL M GKF HLPVV+
Sbjct: 86 ILTDKDILTRVIAREVNLEDTPCSKVMTRNPVFVLTDTLAVEALQKMVQGKFRHLPVVE- 144
Query: 152 DGYVAACVDV 161
+G V A +D+
Sbjct: 145 NGEVVAILDI 154
>Medtr3g099100.1 | CBS/octicosapeptide/phox/Bemp1 (PB1) domain
protein | HC | chr3:45426670-45434715 | 20130731
Length = 528
Score = 178 bits (452), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/168 (60%), Positives = 125/168 (74%), Gaps = 3/168 (1%)
Query: 1 MEKAAEQGSAIAAAVEGAERQRGSNASAPNA-LIETLRERMFKPTLSTIIGDNTKAAIAS 59
ME+AAE+G AIAAAVEG E+ GS+ S N+ +E LRE++FKP+LSTII +N+K +
Sbjct: 164 MERAAEKGKAIAAAVEGVEKHWGSSNSDSNSSFVEALREKIFKPSLSTIIHENSKMVTVA 223
Query: 60 AADPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMT 119
D + KKM EL AV V++ G K +GI+TS+DILMRV+AQNL P T VEKVMT
Sbjct: 224 PTDSILKTTKKMVELHAGCAV-VTVDG-KPRGIVTSRDILMRVIAQNLPPASTHVEKVMT 281
Query: 120 PNPECATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
PNPEC +DT I+DALH MHDGKFLHLPVVDRDG V A VDV+ +THA
Sbjct: 282 PNPECVIIDTPIVDALHTMHDGKFLHLPVVDRDGIVVAVVDVIHVTHA 329
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Query: 64 VYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPE 123
VY A ++M RV+ A++++ S + GILT KDI +VVA+ ++PE T V KVMT NP
Sbjct: 58 VYEACRRMAARRVD-ALLLTDSNGLLCGILTDKDIATKVVAEEINPEDTPVSKVMTRNPV 116
Query: 124 CATLDTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITH 166
+T ++AL M GKF HLPVV+ +G V A +D+ + H
Sbjct: 117 FVLSETLAVEALQKMVQGKFRHLPVVE-NGEVLALLDIAKCLH 158
>Medtr3g111940.1 | cystathionine beta-synthase (CBS) family protein
| HC | chr3:52384666-52383348 | 20130731
Length = 205
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 62 DPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPN 121
D V+ A K M E + S V++ G +I GI+T +D L ++VAQ SP T V ++MT
Sbjct: 79 DAVFNAMKNMAENDIGSLVVLKPEGQQIAGIVTERDCLKKIVAQGRSPLYTQVGQIMTNE 138
Query: 122 PECATL--DTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
+ T+ DT IL A+ +M + + H+PV+ DG + + ++ + A
Sbjct: 139 NDLVTVTSDTNILRAMRLMLENRIRHVPVI--DGEIVGMISIVDVVRA 184
>Medtr3g111940.2 | cystathionine beta-synthase (CBS) family protein
| HC | chr3:52384666-52383348 | 20130731
Length = 205
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 62 DPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPN 121
D V+ A K M E + S V++ G +I GI+T +D L ++VAQ SP T V ++MT
Sbjct: 79 DAVFNAMKNMAENDIGSLVVLKPEGQQIAGIVTERDCLKKIVAQGRSPLYTQVGQIMTNE 138
Query: 122 PECATL--DTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
+ T+ DT IL A+ +M + + H+PV+ DG + + ++ + A
Sbjct: 139 NDLVTVTSDTNILRAMRLMLENRIRHVPVI--DGEIVGMISIVDVVRA 184
>Medtr3g111940.3 | cystathionine beta-synthase (CBS) family protein
| HC | chr3:52384666-52383348 | 20130731
Length = 205
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
Query: 62 DPVYVAAKKMQELRVNSAVIVSLSGTKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPN 121
D V+ A K M E + S V++ G +I GI+T +D L ++VAQ SP T V ++MT
Sbjct: 79 DAVFNAMKNMAENDIGSLVVLKPEGQQIAGIVTERDCLKKIVAQGRSPLYTQVGQIMTNE 138
Query: 122 PECATL--DTTILDALHMMHDGKFLHLPVVDRDGYVAACVDVLQITHA 167
+ T+ DT IL A+ +M + + H+PV+ DG + + ++ + A
Sbjct: 139 NDLVTVTSDTNILRAMRLMLENRIRHVPVI--DGEIVGMISIVDVVRA 184
>Medtr5g076080.2 | cystathionine beta-synthase (CBS) family protein
| HC | chr5:32411387-32407896 | 20130731
Length = 205
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 44 TLSTIIGDNTKAAIAS-----AADPVYVAAKKMQELRVNSAVIVSLSGTK-IQGILTSKD 97
T+S I+ K A S D VY A K M + V + V+V K I GI+T +D
Sbjct: 55 TISDILKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERD 114
Query: 98 ILMRVVAQNLSPELTLVEKVMTPNPECATL--DTTILDALHMMHDGKFLHLPVVDRDGYV 155
L +++ Q S + T V +MT + T+ DT +L A+ +M D + H+PV++ G +
Sbjct: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGML 174
Query: 156 A 156
Sbjct: 175 G 175
>Medtr5g076080.3 | cystathionine beta-synthase (CBS) family protein
| HC | chr5:32411387-32407873 | 20130731
Length = 205
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 44 TLSTIIGDNTKAAIAS-----AADPVYVAAKKMQELRVNSAVIVSLSGTK-IQGILTSKD 97
T+S I+ K A S D VY A K M + V + V+V K I GI+T +D
Sbjct: 55 TISDILKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERD 114
Query: 98 ILMRVVAQNLSPELTLVEKVMTPNPECATL--DTTILDALHMMHDGKFLHLPVVDRDGYV 155
L +++ Q S + T V +MT + T+ DT +L A+ +M D + H+PV++ G +
Sbjct: 115 YLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGML 174
Query: 156 A 156
Sbjct: 175 G 175
>Medtr5g076080.1 | cystathionine beta-synthase (CBS) family protein
| HC | chr5:32411502-32408029 | 20130731
Length = 254
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 44 TLSTIIGDNTKAAIASAA-----DPVYVAAKKMQELRVNSAVIVSLSGTK-IQGILTSKD 97
T+S I+ K A S D VY A K M + V + V+V K I GI+T +D
Sbjct: 104 TISDILKGKGKGADGSWLWCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERD 163
Query: 98 ILMRVVAQNLSPELTLVEKVMTPNPECATL--DTTILDALHMMHDGKFLHLPVVDRDGYV 155
L +++ Q S + T V +MT + T+ DT +L A+ +M D + H+PV++ G +
Sbjct: 164 YLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGML 223
Query: 156 A 156
Sbjct: 224 G 224