Miyakogusa Predicted Gene

Lj0g3v0197229.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0197229.1 Non Characterized Hit- tr|I1M029|I1M029_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,83.02,9e-19,NHL
REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.12481.1
         (362 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g007720.1 | NHL repeat protein | HC | chr6:1850293-1854343...   390   e-108
Medtr8g063760.1 | NHL repeat protein | HC | chr8:26718504-267142...   266   3e-71
Medtr5g034750.1 | NHL repeat protein | HC | chr5:15072581-150770...   201   1e-51
Medtr2g075860.1 | NHL repeat protein | HC | chr2:31740677-317353...    94   2e-19
Medtr8g058630.1 | NHL repeat protein | HC | chr8:20081350-200803...    81   2e-15
Medtr5g034550.1 | NHL repeat protein | HC | chr5:15003202-150038...    69   6e-12
Medtr8g063700.1 | plant/T23E23-13 protein, putative | HC | chr8:...    58   1e-08

>Medtr6g007720.1 | NHL repeat protein | HC | chr6:1850293-1854343 |
           20130731
          Length = 562

 Score =  390 bits (1001), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 222/402 (55%), Positives = 246/402 (61%), Gaps = 46/402 (11%)

Query: 1   MAIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQA 60
           MAIRKISDEG+TTIA              PSEDAKFSNDFD++YA  SCSLLV DRGNQA
Sbjct: 167 MAIRKISDEGVTTIAGGGKRGQLGGHVDGPSEDAKFSNDFDLIYARSSCSLLVDDRGNQA 226

Query: 61  IREIQLHQDDC---TKYKYDEYDNDSSFHLGIAVLIAVGFFGYMLALLQWRVRAMFSSPD 117
           IREIQL+QDDC   T    DEY+ D+SF LGIA L++ GFFGYMLALL+ RV  MFSS D
Sbjct: 227 IREIQLNQDDCITSTTTTNDEYEYDNSFPLGIAALVSAGFFGYMLALLKRRVTDMFSSSD 286

Query: 118 DPRGPLRTKGTPFAAEQQQKRXXXXXXXXXXXXXXAEDEFDKQDEGFFVSLGRLLVNSSS 177
           D R  +RTKGTPFA++Q+                  EDEF+K DEGFFVSLGRLLVNSSS
Sbjct: 287 DSRAHIRTKGTPFASQQRPP-----PKSVRPPLIPNEDEFEKHDEGFFVSLGRLLVNSSS 341

Query: 178 SMGEILGSFFTGSKRKPLPXXXXXXXXXXXXXANRHSSNPWPMQESFVIPDGDE-PPGIE 236
           SMGEI  S F GSKRKPL              ANR  SN WPMQESFVIPDGDE PP +E
Sbjct: 342 SMGEIFLSLFLGSKRKPLSYHQYQQHQQQYHYANRQHSNSWPMQESFVIPDGDEPPPNME 401

Query: 237 ARTPTLRKPYPFMPNEIEKPQQF--------------------------KQTQGYLNRWD 270
            +TPT RK YP+   E+E  ++                           K  + YLN  D
Sbjct: 402 TKTPTQRKTYPYTNKELEMLEKTRDNGFYETNIFPPPVPINRQTESTISKHNRAYLNMLD 461

Query: 271 DGGYD---------EXXXXXXXXXXXXXXXXXXXVQNRYSS-TPQGYYEQNRETNEIVFG 320
              YD                             VQ+ YSS TP  YYE+N ETNEIVFG
Sbjct: 462 K-SYDHEQLQQHHHHHHQEQQQHQNHHQQPQHSKVQSHYSSTTPSSYYEKNCETNEIVFG 520

Query: 321 AVQEHDGRREAMVIKAVDYGDPKFSHQNVRPRLNYVGYSHGY 362
           AVQEHDGRREAMVIKAVDYGDPKFSH N+RPRLNYVGYSH Y
Sbjct: 521 AVQEHDGRREAMVIKAVDYGDPKFSHHNIRPRLNYVGYSHNY 562


>Medtr8g063760.1 | NHL repeat protein | HC | chr8:26718504-26714203
           | 20130731
          Length = 521

 Score =  266 bits (679), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 162/367 (44%), Positives = 208/367 (56%), Gaps = 22/367 (5%)

Query: 1   MAIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQA 60
           MAIRKISD G+TTIA              PSE+AKFS+DFDVVY G SCSLLVVDRGNQA
Sbjct: 170 MAIRKISDSGVTTIAGGKWSRGGGHVDG-PSEEAKFSDDFDVVYVGSSCSLLVVDRGNQA 228

Query: 61  IREIQLHQDDCTKYKYDEYDNDSSFHLGIAVLIAVGFFGYMLALLQWRVRAMFSSPDDPR 120
           IREIQLH DDC  Y+Y      S F LGIA+L+  GFFGYMLALLQ R+  +  S  D +
Sbjct: 229 IREIQLHFDDCA-YRY-----GSDFPLGIAMLVGAGFFGYMLALLQRRLGTIVES-QDAQ 281

Query: 121 GPLRTKGTPFAAEQQQKRXXXXXXXXXXXXXXAEDEFDKQDEGFFVSLGRLLVNSSSSMG 180
            PL    +   +  Q+                +E E +KQ+E FF SLG+LL N+ SSM 
Sbjct: 282 VPLTVMPSVSRSTYQKP-----LKSVRPPLIPSEYEPEKQEESFFGSLGKLLANAGSSMV 336

Query: 181 EILGSFFTGSKRKPLPXXXXXXXXXXXXXANRHSSNPWPMQESFVIPDGDEPPGIEARTP 240
           EI+G  F   +R+  P              ++   N WP QESFVIP  DEPP I+ R P
Sbjct: 337 EIMGGLFPVFRRR--PQSYHQFQRQTLIQQSQKQVNDWPAQESFVIPREDEPPSIDTRAP 394

Query: 241 TLRKPYPFMPNEIEKPQQFKQTQGYLNRWD-DGGYDEXXXXXXXXXXXXXXXXXXXVQNR 299
           T RK YPFM  + EK QQ +Q++ + + WD D    +                    ++ 
Sbjct: 395 TPRKTYPFMSKDAEKIQQLRQSKAFYSGWDGDQHQQQQPQPQPQPQQQQQQQQQQQQKHH 454

Query: 300 Y-----SSTPQGYYEQ-NRETNEIVFGAVQEHDGRREAMVIKAVDYGDPKFSHQNVRPRL 353
           Y     SS P  +YEQ N  TNE+VFGAVQE DG++E++VI  V+YG   + H++ R R+
Sbjct: 455 YRHQYQSSVPHTFYEQTNETTNEVVFGAVQEQDGKKESVVITPVEYGGSLYEHRDFRSRM 514

Query: 354 NYVGYSH 360
           +Y+GY +
Sbjct: 515 SYMGYKY 521


>Medtr5g034750.1 | NHL repeat protein | HC | chr5:15072581-15077047
           | 20130731
          Length = 560

 Score =  201 bits (510), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/270 (45%), Positives = 152/270 (56%), Gaps = 20/270 (7%)

Query: 1   MAIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQA 60
           MAIRKISD G+TTIA              PSE+AKFSNDFDVVY G SCSLLV+DRGNQA
Sbjct: 167 MAIRKISDSGVTTIAGGKLSRGGGHVDG-PSEEAKFSNDFDVVYVGSSCSLLVIDRGNQA 225

Query: 61  IREIQLHQDDCTKYKYDEYDNDSSFHLGIAVLIAVGFFGYMLALLQWRVRAMFSSPDDPR 120
           IREIQL  DDC       Y  +S F LGIA+L+  GFFGYMLALLQ R+  + +S D   
Sbjct: 226 IREIQLRFDDCA------YQYESGFPLGIAMLLGAGFFGYMLALLQRRLSTIVASQDMTL 279

Query: 121 GPLRTKGTPFAAEQQQKRXXXXXXXXXXXXXXAEDEFDKQDEGFFVSLGRLLVNSSSSMG 180
               +  + F+    QK               +EDE  KQ+EG F S+G+LL N+ +S+ 
Sbjct: 280 AE-SSAMSDFSPSPYQK----PLKSVRPPLIPSEDESYKQEEGLFASIGKLLTNAGASVV 334

Query: 181 EILGSFFTGSKRKPLPXXXXXXXXXXXXXANRHSSNPWPMQESFVIPDGDEPPGIEARTP 240
           EI+     G ++KP                     N WP+QESFVI + DEPP I+ RTP
Sbjct: 335 EIM-----GFRKKP---QSYEFQSQPLFHQPERQINAWPVQESFVITNEDEPPSIDPRTP 386

Query: 241 TLRKPYPFMPNEIEKPQQFKQTQGYLNRWD 270
           T +K YPFM  + EK QQ  Q +   N W+
Sbjct: 387 TPKKTYPFMIKDTEKMQQLWQGRALYNGWE 416



 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 3/62 (4%)

Query: 297 QNRY-SSTPQGYYEQNRE-TNEIVFGAVQEHDGRREAMVIKAVDYGDPKFSHQNVRPRLN 354
           +N+Y SS    YYEQ+ E TNEIVFGAVQE D  +E++VIK +DYGD  + H N+R R++
Sbjct: 497 RNQYHSSVAHTYYEQSHEETNEIVFGAVQEQD-EKESVVIKPLDYGDSFYDHHNMRSRIS 555

Query: 355 YV 356
           Y+
Sbjct: 556 YI 557


>Medtr2g075860.1 | NHL repeat protein | HC | chr2:31740677-31735332
           | 20130731
          Length = 493

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 111/241 (46%), Gaps = 43/241 (17%)

Query: 1   MAIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQA 60
           +AIRKI D G+TTIA              PSEDAKFSNDFDVVY   +CSLLV+DRGN A
Sbjct: 164 LAIRKIGDAGVTTIAGGKSNVAGYRDG--PSEDAKFSNDFDVVYVRPTCSLLVIDRGNAA 221

Query: 61  IREIQLHQDDCTKYKYDEYDNDSSFHLGIAVLIAVGFFGYMLALLQWRVRAMFSSPDDPR 120
           +R+I L Q+DC      +Y + S     I +++     GY   +LQ    + F S     
Sbjct: 222 LRKIILDQEDC------DYQSSSISSTDILIVVGAVLVGYATCMLQQGFGSSFFS----- 270

Query: 121 GPLRTKGTPFAA-EQQQKRXXXXXXXXXXXXXXAEDEFDKQDEGFFVSLGRLLVNSSSSM 179
              R+ G  F   E   KR                 E  K+D G + S G+L+ + S   
Sbjct: 271 -KTRSSGQEFKGRESNDKRMPIP-------------ESSKEDPG-WPSFGQLIADLSKLS 315

Query: 180 GEILGSFFTGSKRKPLPXXXXXXXXXXXXXANRHSSNPWPMQESFVIPDGD-EPPGIEAR 238
            E L S FT    + +P              N   +   P+++  V+P+ + +PP ++ +
Sbjct: 316 LEALASAFT----QFMPSHFKF---------NSRKTGLTPLKDRLVMPEDEVQPPLVKRK 362

Query: 239 T 239
           T
Sbjct: 363 T 363


>Medtr8g058630.1 | NHL repeat protein | HC | chr8:20081350-20080362
           | 20130731
          Length = 150

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 48/71 (67%), Gaps = 2/71 (2%)

Query: 1   MAIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQA 60
           MAIRKI D G+TTIA              P EDAK SNDFDVVY   +CSLLV+DRGN A
Sbjct: 60  MAIRKIGDAGVTTIAGGKSNVAGYRDG--PGEDAKLSNDFDVVYIRPTCSLLVIDRGNAA 117

Query: 61  IREIQLHQDDC 71
           +R+I L+Q+DC
Sbjct: 118 LRQIFLNQEDC 128


>Medtr5g034550.1 | NHL repeat protein | HC | chr5:15003202-15003898
           | 20130731
          Length = 154

 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 45/75 (60%), Gaps = 17/75 (22%)

Query: 40  FDVVYAGRSCSLLVVDRGNQAIREIQLHQDDCTKYKYDEYDNDSSFHLG----------- 88
           FDV+Y G S SLLV+DRG QAIREIQL  DDC       Y  +S F LG           
Sbjct: 80  FDVIYVGSSYSLLVIDRGKQAIREIQLRFDDCA------YQYESRFPLGKLNKFKVCLYR 133

Query: 89  IAVLIAVGFFGYMLA 103
           IA+L+  GFFGYM+A
Sbjct: 134 IAMLVGAGFFGYMMA 148


>Medtr8g063700.1 | plant/T23E23-13 protein, putative | HC |
           chr8:26697994-26701680 | 20130731
          Length = 384

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 2/96 (2%)

Query: 2   AIRKISDEGITTIAXXXXXXXXXXXXXXPSEDAKFSNDFDVVYAGRSCSLLVVDRGNQAI 61
            IRKIS  G+TTIA              P+++A FSNDF++ +    C+LLV D  +Q +
Sbjct: 128 VIRKISTNGVTTIAGGSSEKSSIKDG--PAQNASFSNDFELTFIPALCALLVSDHMHQLV 185

Query: 62  REIQLHQDDCTKYKYDEYDNDSSFHLGIAVLIAVGF 97
            +I L ++DCT           ++ LG+ +   +G 
Sbjct: 186 HQINLKEEDCTLGSKSALGAVMTWTLGLGLSCILGL 221