Miyakogusa Predicted Gene

Lj0g3v0197219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0197219.1 Non Characterized Hit- tr|F6HLC6|F6HLC6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,23.69,0.000000000001,seg,NULL,CUFF.12482.1
         (594 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g096870.1 | GTP-binding protein Obg/CgtA protein | HC | ch...   543   e-154
Medtr2g096870.2 | GTP-binding protein Obg/CgtA protein | HC | ch...   528   e-150

>Medtr2g096870.1 | GTP-binding protein Obg/CgtA protein | HC |
           chr2:41402050-41405811 | 20130731
          Length = 692

 Score =  543 bits (1399), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 316/587 (53%), Positives = 386/587 (65%), Gaps = 57/587 (9%)

Query: 19  GCMWGMFQILDYHHWHVKKVFPHKKRRQSRYKRKTISHIQGEEEDQQHEVAEAESFLVK- 77
           GCMWGMF I DYH W VK+VF  KK+R +RYK+KT        +DQQ+ V +AES  V  
Sbjct: 21  GCMWGMFHIFDYHRWGVKRVFHCKKKRHARYKKKT------SLQDQQNAVTDAESLKVSQ 74

Query: 78  ----SSPQNQANSEHVLQLEKDGNTTEATINHKRVETNKLNRGTSNKFTKRVDVMELVSE 133
               S+ + QA+S + L  +KD NTT         +   LNR  S KF    DV+E+++ 
Sbjct: 75  HREISNAKGQASSGNALHQKKDVNTT--------TDQGSLNRDISIKFKNNDDVLEVINV 126

Query: 134 EXXXXXXXXXXXXVSGKTSHKASRKKGRLIKSGSFPL--PSQKKNFSSSTFKHKQYEIWT 191
           E            + GK  H+    K +L KSGSFPL  PS+ KN SSSTF+ KQ EIW 
Sbjct: 127 EKNALLKFLRDIDIGGKKIHQTPHNKAKLTKSGSFPLTAPSKVKNISSSTFRSKQTEIWH 186

Query: 192 FSKGEKFHAGTDQAQKK---SALKDISYEEPTSSVSDLGMDS--AMQQKRSVSSRSAEGL 246
           F KGEK  AGT QA KK   S +KDISYE    S SDLG+DS  AMQQK S+SSR +EGL
Sbjct: 187 FPKGEKLLAGT-QAPKKLGSSLVKDISYETSKPSASDLGIDSVTAMQQKPSISSRPSEGL 245

Query: 247 NHKGWNQLVIHQFKVIKQKIKHALVEFKLSSHQTSEEAIAENNDKEISQGLDDGVVHDSN 306
           +HKGWNQ+VIHQFK IKQKIKHALVEFK S HQ S E I  NN+KEISQ LD GV+ +  
Sbjct: 246 SHKGWNQVVIHQFKAIKQKIKHALVEFKKSGHQASVEVI-HNNEKEISQSLDVGVIQEYR 304

Query: 307 ENEISNETKPSDHDFNKHEARQMRRTPSLNESLDRYTQLFEKSFTKDVKWHRSKSKSLRL 366
           +++  +E K S+ D NKHEA  MRRT SLNES+DRYTQLFEKS +K++KW  SKSKSLRL
Sbjct: 305 KSKSLSEAKASESDSNKHEASLMRRTSSLNESMDRYTQLFEKSMSKEIKWQSSKSKSLRL 364

Query: 367 TNEDKIHKSGPAPIFSRSNMSMPSLEAIGFILHEALFDTNETGNSTVETDGHVQRKPVSL 426
           TN+DKIHKS  A +FSRSN+SMP+LE++GFILH+ L DTNE  N+TVE+D  VQRK VS+
Sbjct: 365 TNDDKIHKSRHARMFSRSNLSMPNLESLGFILHDVLIDTNE-ANNTVESDNDVQRKSVSV 423

Query: 427 PSKITKPLDHVREAEIVETVERNEKTDGVTCDQREDMHEPAEGDESFLQEKEEKSMTTYL 486
           P KI K L+H +EAE+ ETVE + +          D++  +  D   ++     SMT YL
Sbjct: 424 PLKIDKSLEHFKEAEVDETVEGSAR----------DVNPSSLSDNPAVK----TSMTAYL 469

Query: 487 SNEEITSLEISCENNTTSNAKGGEFETVPHRGSVASLPDSLSNTNANAIAKDTNKSSDNH 546
           S E  TSLEISC++N  S A+G E      R S AS+ D            DTN S +NH
Sbjct: 470 SKEATTSLEISCQDNIISQAEGKESNA---RSSNASVTDI-----------DTNNSLENH 515

Query: 547 FLLFKSDEEKDSNFQYVKAVLEYSGLMGNDQIQMPYTVDQPLKPSLF 593
           FL FKS  E DSNF+YVK +LE+SG MGN+Q QM YTVDQP+KPSLF
Sbjct: 516 FLHFKSYPENDSNFKYVKDILEFSGFMGNEQTQMRYTVDQPMKPSLF 562


>Medtr2g096870.2 | GTP-binding protein Obg/CgtA protein | HC |
           chr2:41402176-41405675 | 20130731
          Length = 730

 Score =  528 bits (1359), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 316/625 (50%), Positives = 386/625 (61%), Gaps = 95/625 (15%)

Query: 19  GCMWGMFQILDYHHWHVKKVFPHKKRRQSRYKRKTISHIQGEEEDQQHEVAEAESFLVK- 77
           GCMWGMF I DYH W VK+VF  KK+R +RYK+KT        +DQQ+ V +AES  V  
Sbjct: 21  GCMWGMFHIFDYHRWGVKRVFHCKKKRHARYKKKT------SLQDQQNAVTDAESLKVCL 74

Query: 78  ------------------------------------------SSPQNQANSEHVLQLEKD 95
                                                     S+ + QA+S + L  +KD
Sbjct: 75  KIHDYILWSHQQINKRIIVLYIIIVVESNIKYKYQVSQHREISNAKGQASSGNALHQKKD 134

Query: 96  GNTTEATINHKRVETNKLNRGTSNKFTKRVDVMELVSEEXXXXXXXXXXXXVSGKTSHKA 155
            NTT         +   LNR  S KF    DV+E+++ E            + GK  H+ 
Sbjct: 135 VNTT--------TDQGSLNRDISIKFKNNDDVLEVINVEKNALLKFLRDIDIGGKKIHQT 186

Query: 156 SRKKGRLIKSGSFPL--PSQKKNFSSSTFKHKQYEIWTFSKGEKFHAGTDQAQKK---SA 210
              K +L KSGSFPL  PS+ KN SSSTF+ KQ EIW F KGEK  AGT QA KK   S 
Sbjct: 187 PHNKAKLTKSGSFPLTAPSKVKNISSSTFRSKQTEIWHFPKGEKLLAGT-QAPKKLGSSL 245

Query: 211 LKDISYEEPTSSVSDLGMDS--AMQQKRSVSSRSAEGLNHKGWNQLVIHQFKVIKQKIKH 268
           +KDISYE    S SDLG+DS  AMQQK S+SSR +EGL+HKGWNQ+VIHQFK IKQKIKH
Sbjct: 246 VKDISYETSKPSASDLGIDSVTAMQQKPSISSRPSEGLSHKGWNQVVIHQFKAIKQKIKH 305

Query: 269 ALVEFKLSSHQTSEEAIAENNDKEISQGLDDGVVHDSNENEISNETKPSDHDFNKHEARQ 328
           ALVEFK S HQ S E I  NN+KEISQ LD GV+ +  +++  +E K S+ D NKHEA  
Sbjct: 306 ALVEFKKSGHQASVEVI-HNNEKEISQSLDVGVIQEYRKSKSLSEAKASESDSNKHEASL 364

Query: 329 MRRTPSLNESLDRYTQLFEKSFTKDVKWHRSKSKSLRLTNEDKIHKSGPAPIFSRSNMSM 388
           MRRT SLNES+DRYTQLFEKS +K++KW  SKSKSLRLTN+DKIHKS  A +FSRSN+SM
Sbjct: 365 MRRTSSLNESMDRYTQLFEKSMSKEIKWQSSKSKSLRLTNDDKIHKSRHARMFSRSNLSM 424

Query: 389 PSLEAIGFILHEALFDTNETGNSTVETDGHVQRKPVSLPSKITKPLDHVREAEIVETVER 448
           P+LE++GFILH+ L DTNE  N+TVE+D  VQRK VS+P KI K L+H +EAE+ ETVE 
Sbjct: 425 PNLESLGFILHDVLIDTNE-ANNTVESDNDVQRKSVSVPLKIDKSLEHFKEAEVDETVEG 483

Query: 449 NEKTDGVTCDQREDMHEPAEGDESFLQEKEEKSMTTYLSNEEITSLEISCENNTTSNAKG 508
           + +          D++  +  D   ++     SMT YLS E  TSLEISC++N  S A+G
Sbjct: 484 SAR----------DVNPSSLSDNPAVK----TSMTAYLSKEATTSLEISCQDNIISQAEG 529

Query: 509 GEFETVPHRGSVASLPDSLSNTNANAIAKDTNKSSDNHFLLFKSDEEKDSNFQYVKAVLE 568
            E      R S AS+ D            DTN S +NHFL FKS  E DSNF+YVK +LE
Sbjct: 530 KESNA---RSSNASVTDI-----------DTNNSLENHFLHFKSYPENDSNFKYVKDILE 575

Query: 569 YSGLMGNDQIQMPYTVDQPLKPSLF 593
           +SG MGN+Q QM YTVDQP+KPSLF
Sbjct: 576 FSGFMGNEQTQMRYTVDQPMKPSLF 600