Miyakogusa Predicted Gene

Lj0g3v0196789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196789.1 Non Characterized Hit- tr|I1KE45|I1KE45_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52838 PE,69.49,2e-17,
,CUFF.12465.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g057740.2 | hypothetical protein | HC | chr7:20889057-2088...   120   3e-28
Medtr7g057740.3 | hypothetical protein | HC | chr7:20889109-2088...   119   6e-28
Medtr7g057740.1 | hypothetical protein | HC | chr7:20886488-2088...   117   3e-27

>Medtr7g057740.2 | hypothetical protein | HC |
          chr7:20889057-20885741 | 20130731
          Length = 97

 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 65/77 (84%)

Query: 1  MLESGSMDQPVPQKPLWCERKQAAVHEELRRMNQLPAHSIYVVHRLKVLNKILQLMSIQR 60
          M++ G+  QP  QKP+WC RKQA V +E+R+MNQLPA+S YV HRLKVLNKI+QLMS+QR
Sbjct: 21 MMDDGATHQPAAQKPVWCARKQAVVQDEIRKMNQLPANSTYVAHRLKVLNKIMQLMSVQR 80

Query: 61 TASQEEELEQLFAGLSL 77
          T SQE+ELE LFAGLSL
Sbjct: 81 TISQEQELELLFAGLSL 97


>Medtr7g057740.3 | hypothetical protein | HC |
          chr7:20889109-20885723 | 20130731
          Length = 77

 Score =  119 bits (298), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 65/77 (84%)

Query: 1  MLESGSMDQPVPQKPLWCERKQAAVHEELRRMNQLPAHSIYVVHRLKVLNKILQLMSIQR 60
          M++ G+  QP  QKP+WC RKQA V +E+R+MNQLPA+S YV HRLKVLNKI+QLMS+QR
Sbjct: 1  MMDDGATHQPAAQKPVWCARKQAVVQDEIRKMNQLPANSTYVAHRLKVLNKIMQLMSVQR 60

Query: 61 TASQEEELEQLFAGLSL 77
          T SQE+ELE LFAGLSL
Sbjct: 61 TISQEQELELLFAGLSL 77


>Medtr7g057740.1 | hypothetical protein | HC |
          chr7:20886488-20886101 | 20130731
          Length = 76

 Score =  117 bits (292), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 53/76 (69%), Positives = 64/76 (84%)

Query: 2  LESGSMDQPVPQKPLWCERKQAAVHEELRRMNQLPAHSIYVVHRLKVLNKILQLMSIQRT 61
          ++ G+  QP  QKP+WC RKQA V +E+R+MNQLPA+S YV HRLKVLNKI+QLMS+QRT
Sbjct: 1  MDDGATHQPAAQKPVWCARKQAVVQDEIRKMNQLPANSTYVAHRLKVLNKIMQLMSVQRT 60

Query: 62 ASQEEELEQLFAGLSL 77
           SQE+ELE LFAGLSL
Sbjct: 61 ISQEQELELLFAGLSL 76