Miyakogusa Predicted Gene

Lj0g3v0196679.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196679.1 Non Characterized Hit- tr|B9R6Y6|B9R6Y6_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,45.36,3e-19,seg,NULL,CUFF.12459.1
         (180 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g103260.1 | hypothetical protein | HC | chr3:47591934-4759...   126   1e-29
Medtr1g017890.1 | hypothetical protein | HC | chr1:5098753-50980...   114   7e-26
Medtr5g005230.1 | hypothetical protein | HC | chr5:336081-337571...    83   1e-16

>Medtr3g103260.1 | hypothetical protein | HC |
           chr3:47591934-47592702 | 20130731
          Length = 147

 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/135 (61%), Positives = 96/135 (71%), Gaps = 12/135 (8%)

Query: 49  DLSMVSDASSGPP-HYHEEDDQIQSYGLNWYPSSSLYTKESVKKQKVKEYGR-IQQPSPL 106
           DLSMVSDASSGPP +YH E++  Q Y +NW+      +     K+K KEYGR  QQ SPL
Sbjct: 22  DLSMVSDASSGPPQYYHVEENYQQPYCVNWH-----SSTSKESKKKGKEYGRKSQQSSPL 76

Query: 107 EFDDTASSPVLNCHKANKQASFSGNGAVEDALDFSPCFSATRTKRKPKFQKHFSFF-GGK 165
             DDTASSPVLN  K   + +FS NGAVE+ LDFSP FSATRTKRK K QKH SF  GGK
Sbjct: 77  --DDTASSPVLNYPK--NKVNFSENGAVENTLDFSPSFSATRTKRKSKLQKHSSFLDGGK 132

Query: 166 QASEGPGGFDEDERK 180
           QAS+ PGGF+ +ERK
Sbjct: 133 QASKEPGGFNGEERK 147


>Medtr1g017890.1 | hypothetical protein | HC | chr1:5098753-5098091
           | 20130731
          Length = 158

 Score =  114 bits (284), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/159 (53%), Positives = 98/159 (61%), Gaps = 19/159 (11%)

Query: 1   MDMSSSQYNSASESGWTHYFDQPSLSEKHFQ-RSGIVEYKGM-------XXXXXXXDLSM 52
           MD+S+S+Y+ ASESGWTHY  Q S SE +FQ +  IVE +G               DLSM
Sbjct: 1   MDISASKYSDASESGWTHYLVQSSFSESYFQSKDEIVENEGKGARMVMDEKEESEEDLSM 60

Query: 53  VSDASSGPPHYHEEDDQIQSYGLNWYPSSSLYTKESVKKQKVKEYGRIQQPSPLEFDDTA 112
           VSDASSGPPHY   D++ Q    NWY   S  TKE+ KK+KVKEY   QQPSPL  DDTA
Sbjct: 61  VSDASSGPPHY---DNEYQCE--NWYTCLSSTTKETQKKKKVKEYDTSQQPSPL--DDTA 113

Query: 113 SSPVLNC----HKANKQASFSGNGAVEDALDFSPCFSAT 147
           SS   +C    HK   + SF  NGAV  ALDFS C SAT
Sbjct: 114 SSQFFSCPKQSHKKKDKDSFLRNGAVRSALDFSECISAT 152


>Medtr5g005230.1 | hypothetical protein | HC | chr5:336081-337571 |
           20130731
          Length = 185

 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 1   MDMSSSQYNSASESGWTHYFDQP-SLSEKHFQRSGIVEYKGMXXXXX-----XXDLSMVS 54
           MD  +S+ +S  ESGWT Y D+  + S+ H    G  E                DLSMVS
Sbjct: 1   MDTLASECSSGCESGWTLYLDRSLNTSQSHTPSLGCYEETKHKKAQNIEDSDEEDLSMVS 60

Query: 55  DASSGPPHYHEEDDQIQSYGLNWYPSSSLYTKESVKKQKVKEYGRIQQPSPLEFDDTASS 114
           DASSGPPH+   D    +   +    + L  K S K+QKV+E   IQQ      DDTASS
Sbjct: 61  DASSGPPHH---DSYFNAQDCSASKPTKLVAKRSKKRQKVQENNNIQQ----HLDDTASS 113

Query: 115 PVLNCHKANKQASFSGNGAVEDALDFSPCFSATRTKRKPKFQKHFSFF 162
           P+ + +     ++       E  LD+S  FSAT  + +   Q HF F 
Sbjct: 114 PLFDNNNVVTMSNQQTTSTTESMLDYSQGFSATYFEERSSLQDHFGFL 161