Miyakogusa Predicted Gene

Lj0g3v0196649.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196649.1 tr|G7I715|G7I715_MEDTR
UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter
OS=Medicago trunc,63.86,1e-18, ,CUFF.12455.1
         (90 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g012590.1 | UDP-sugar transporter-like protein | HC | chr1...    97   3e-21
Medtr1g012590.2 | UDP-sugar transporter-like protein | HC | chr1...    97   3e-21

>Medtr1g012590.1 | UDP-sugar transporter-like protein | HC |
          chr1:2543649-2548731 | 20130731
          Length = 278

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 8/83 (9%)

Query: 3  SLKPSYSSDNLTLPVSDPPNDDDRERLLKGNDSIFRGSTRRERGGVYAAISYMSCAVLLV 62
          SLK S SS+   LP+SDPP +         +D +F+GS   +RG  YAAISYMSCAVLLV
Sbjct: 2  SLKTSNSSEKPMLPLSDPPKNQI-------DDKLFKGSAMTKRGA-YAAISYMSCAVLLV 53

Query: 63 MFNKAALSSYHFPSANVITLLQV 85
          MFNKAALSSY+FPSANVITLLQ+
Sbjct: 54 MFNKAALSSYNFPSANVITLLQM 76


>Medtr1g012590.2 | UDP-sugar transporter-like protein | HC |
          chr1:2543659-2548621 | 20130731
          Length = 269

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 8/83 (9%)

Query: 3  SLKPSYSSDNLTLPVSDPPNDDDRERLLKGNDSIFRGSTRRERGGVYAAISYMSCAVLLV 62
          SLK S SS+   LP+SDPP +         +D +F+GS   +RG  YAAISYMSCAVLLV
Sbjct: 2  SLKTSNSSEKPMLPLSDPPKNQI-------DDKLFKGSAMTKRGA-YAAISYMSCAVLLV 53

Query: 63 MFNKAALSSYHFPSANVITLLQV 85
          MFNKAALSSY+FPSANVITLLQ+
Sbjct: 54 MFNKAALSSYNFPSANVITLLQM 76