Miyakogusa Predicted Gene

Lj0g3v0196519.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196519.1 Non Characterized Hit- tr|C5Y0T2|C5Y0T2_SORBI
Putative uncharacterized protein Sb04g031370
OS=Sorghu,34.97,9e-19,seg,NULL,CUFF.12438.1
         (308 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g087340.1 | hypothetical protein | LC | chr1:39151868-3915...    53   5e-07

>Medtr1g087340.1 | hypothetical protein | LC |
          chr1:39151868-39152460 | 20130731
          Length = 63

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/36 (75%), Positives = 30/36 (83%), Gaps = 2/36 (5%)

Query: 43 CSRNSDV--NPPPPLIFPRSVSPYVSRRKSDYSAPG 76
          CSRNS+   + PPPLIFP SVSPYVSRRKSDY+A G
Sbjct: 20 CSRNSETTNHLPPPLIFPLSVSPYVSRRKSDYAAVG 55