Miyakogusa Predicted Gene
- Lj0g3v0196359.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0196359.1 Non Characterized Hit- tr|I1MYB3|I1MYB3_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,38.67,1e-18,LRR,Leucine-rich repeat; LEURICHRPT,NULL;
LRR_1,Leucine-rich repeat; LRRNT_2,Leucine-rich
repeat-con,CUFF.12427.1
(256 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g084510.1 | LRR receptor-like kinase | HC | chr3:38162418-... 79 4e-15
Medtr7g082110.1 | receptor-like kinase, putative | LC | chr7:314... 77 2e-14
Medtr4g044393.1 | receptor-like kinase, putative | LC | chr4:150... 75 7e-14
Medtr0394s0020.1 | tyrosine kinase domain protein | LC | scaffol... 74 1e-13
Medtr7g082280.1 | tyrosine kinase family protein | HC | chr7:315... 69 4e-12
Medtr7g082300.1 | LRR kinase family protein | LC | chr7:31544318... 69 5e-12
Medtr8g083240.1 | LRR receptor-like kinase | HC | chr8:35071258-... 65 8e-11
Medtr0721s0020.1 | transmembrane protein, putative | LC | scaffo... 65 8e-11
Medtr7g086800.1 | LRR amine-terminal domain protein | LC | chr7:... 56 4e-08
Medtr7g081780.1 | LRR receptor-like kinase family protein | HC |... 50 1e-06
Medtr5g026000.1 | LRR receptor-like kinase family protein | LC |... 49 3e-06
Medtr7g082310.1 | LRR receptor-like kinase | LC | chr7:31550481-... 48 9e-06
>Medtr3g084510.1 | LRR receptor-like kinase | HC |
chr3:38162418-38158211 | 20130731
Length = 933
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 26 VSTMSLFFIFTFL-SVAIADDAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVT 84
+S LFF F+FL AIADD +MSKL K+LTP PSGWS N SFC W+GV CD S RVT
Sbjct: 12 ISLSKLFFTFSFLLHTAIADDGAFMSKLAKSLTPPPSGWSGN-SFCSWNGVKCDGSDRVT 70
Query: 85 AIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNGSLPSLANLTNLTGLF 135
++ G+LPSLANLT L +F
Sbjct: 71 SL-NLASKSLTGTLPSDLNSLSQLTTLSLQSNSLTGALPSLANLTMLQTVF 120
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 118 FNGSLPS-LANLTNLTGLFKLNLSRNNLNGPIPXXXXXXXXXXXXXXXYNNLCGQVPKFS 176
NG++ S NLT+L L+ L+ NNL G IP NNL G++PKFS
Sbjct: 380 LNGTISSAFGNLTDLRNLY---LNGNNLTGSIPGSLTGLTQLEVLDVSNNNLSGEIPKFS 436
Query: 177 PWVKLYTAGNDLLHSPCGGALSGS 200
V+ +AGN LL G SG+
Sbjct: 437 GKVRFNSAGNGLLGKSEGDGGSGT 460
>Medtr7g082110.1 | receptor-like kinase, putative | LC |
chr7:31436869-31439723 | 20130731
Length = 852
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 29/120 (24%)
Query: 31 LFFIFTFLSVAIADDAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVTAIVXXX 90
LF F L + I DD +MSKL K+L+PTPSGWS +++FC W+GV CD++ RVT+I
Sbjct: 13 LFLSFYILQMTIGDDGTFMSKLAKSLSPTPSGWSISSNFCTWNGVKCDQAHRVTSI---- 68
Query: 91 XXXXXXXXXXXXXXXXXXXXXXXXXXXFNGSLPS-LANLTNLTGLFKLNLSRNNLNGPIP 149
NG+LPS L +L+ LT LF L N+L+G +P
Sbjct: 69 ---------------------DLSSKSLNGTLPSDLNSLSQLTSLF---LQSNSLSGALP 104
>Medtr4g044393.1 | receptor-like kinase, putative | LC |
chr4:15061040-15064070 | 20130731
Length = 831
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 32 FFIFTFLSVAIADDAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVTAI 86
F + FL + IADD +MSKL K+L+PTPSGWS NTSFC W+GV CD + VT+I
Sbjct: 16 FSLILFLRMVIADDGTFMSKLAKSLSPTPSGWSSNTSFCLWTGVRCDEFNSVTSI 70
>Medtr0394s0020.1 | tyrosine kinase domain protein | LC |
scaffold0394:2914-1672 | 20130731
Length = 371
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 40/55 (72%)
Query: 32 FFIFTFLSVAIADDAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVTAI 86
F + FL + IADD +MSKL K+L+PTPSGWS NTSFC W+GV CD + VT I
Sbjct: 16 FSLILFLRMVIADDGTFMSKLAKSLSPTPSGWSSNTSFCLWTGVRCDEFNSVTCI 70
>Medtr7g082280.1 | tyrosine kinase family protein | HC |
chr7:31535549-31532022 | 20130731
Length = 734
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 27/105 (25%)
Query: 45 DAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVTAIVXXXXXXXXXXXXXXXXX 104
D YMSKLLKALTPTPS WS NT +C W+G+VCD+S R+ I
Sbjct: 32 DYNYMSKLLKALTPTPSNWSNNTHYCRWNGIVCDQSHRIRNIT----------------- 74
Query: 105 XXXXXXXXXXXXXFNGSLPSLANLTNLTGLFKLNLSRNNLNGPIP 149
G+LPS NL +L+ L ++L N+L G +P
Sbjct: 75 --------LPSSSLTGTLPS--NLNSLSYLTHIDLHNNSLTGTLP 109
>Medtr7g082300.1 | LRR kinase family protein | LC |
chr7:31544318-31540478 | 20130731
Length = 862
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 29/126 (23%)
Query: 27 STMSLFFIFTFLSVAIAD---DAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRV 83
S + F I ++V I + DA YMS+L+KALTPTP GWS N +C W+G+ CD+S++V
Sbjct: 8 SVLYYFSILIIVTVTITNGEKDADYMSQLMKALTPTPKGWSGNIHYCKWNGIRCDQSNQV 67
Query: 84 TAIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNGSLPSLANLTNLTGLFKLNLSRNN 143
+ G +P N +L L ++L N+
Sbjct: 68 VTAI------------------------KLPSSSLTGIIPE--NFNSLNNLTDIDLHNNS 101
Query: 144 LNGPIP 149
LNGP+P
Sbjct: 102 LNGPLP 107
>Medtr8g083240.1 | LRR receptor-like kinase | HC |
chr8:35071258-35074803 | 20130731
Length = 916
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 40 VAIADDAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSSRVTAIVXXXXXXXXXXXX 99
V DD M L ++L P+P+GWS NTSFC WSGV C +RVT+I
Sbjct: 17 VVADDDGTVMQSLRQSLKPSPNGWSSNTSFCQWSGVKCSSDNRVTSI-NLSDQKLAGTLP 75
Query: 100 XXXXXXXXXXXXXXXXXXFNGSLPSLANLTNLTGLFKLNLSRNNLNGPIP 149
+G LPSLANL++LT +NL NN + P
Sbjct: 76 DNLNSLTQLTTLYLQNNALSGPLPSLANLSSLT---DVNLGSNNFSSVTP 122
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 123 PSLANLTNLTGLFKLNLSRNNLNGPIPXXXXXXXXXXXXXXXYNNLCGQVPKFSPWVKLY 182
P+ ANLT+LT L+ L+ NNL G IP N+L G+VPKFSP VK
Sbjct: 377 PAFANLTDLTALY---LNGNNLTGSIPQNLATLSQLETLDVSNNDLSGEVPKFSPKVKFI 433
Query: 183 TAGN 186
T GN
Sbjct: 434 TDGN 437
>Medtr0721s0020.1 | transmembrane protein, putative | LC |
scaffold0721:6330-5643 | 20130731
Length = 156
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 32 FFIFTFLSVAIADDAVYMSKLLKALTPTPSGWSQNTSFCHWSGV 75
F + FL + IADD +MSKL K+L+PTPSGWS NTSFC W+GV
Sbjct: 16 FSLILFLRMVIADDGTFMSKLAKSLSPTPSGWSSNTSFCLWTGV 59
>Medtr7g086800.1 | LRR amine-terminal domain protein | LC |
chr7:33760382-33760023 | 20130731
Length = 119
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 55/128 (42%), Gaps = 36/128 (28%)
Query: 30 SLFFIFTFLSVAIA--------DDAVYMSKLLKALTPTPSGWSQNTSFCHWSGVVCDRSS 81
S+F F L+V +A D+ YM + LKALT P+GWS NT C W+ V C RS+
Sbjct: 4 SVFHYFAILTVVVATVAQFRVEDEGDYMHQFLKALTRPPTGWSNNTHHCKWNSVTC-RSN 62
Query: 82 RVTAIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNGSLPSLANLTNLTGLFKLNLSR 141
VT G++P L N LT L L+L
Sbjct: 63 CVTT-------------------------SKLPSSSLVGTIPILIN--TLTNLTHLDLRN 95
Query: 142 NNLNGPIP 149
N+L GP+P
Sbjct: 96 NSLTGPMP 103
>Medtr7g081780.1 | LRR receptor-like kinase family protein | HC |
chr7:31181794-31185349 | 20130731
Length = 1060
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 68/179 (37%), Gaps = 20/179 (11%)
Query: 29 MSLFFI-FTFLSVAIADDAVYMSKLLK----------ALTPTPSGWSQNTSFCHWSGVVC 77
M LF I FT A+A D+ S LLK AL PT W T+ C W G+ C
Sbjct: 8 MILFIILFTSWPQAVAQDSEAKSALLKWKNSFDNPSQALLPT---WKNTTNPCRWQGIHC 64
Query: 78 DRSSRVTAIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNGSLPSLANLTNLTGLFKL 137
D+S+ +T I F G++P + NL+ + L
Sbjct: 65 DKSNSITTINLESLGLKGTLHSLTFSSFTNLTTLNIYDNNFYGTIP--PQIGNLSKINSL 122
Query: 138 NLSRNNLNGPIPXXXXXXXXXXXXXXXYNNLCGQVP----KFSPWVKLYTAGNDLLHSP 192
N SRN ++G IP Y L G +P + + L GN+ + +P
Sbjct: 123 NFSRNPIDGSIPQEMFTLKSLQNIDFLYCKLSGAIPNSIGNLTNLLYLDLGGNNFVGTP 181
>Medtr5g026000.1 | LRR receptor-like kinase family protein | LC |
chr5:10654709-10651490 | 20130731
Length = 1013
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 118 FNGSLPSLANLTNLTGLFKLNLSRNNLNGPIPXXXXXXXXXXXXXXXYNNLCGQVPK--- 174
FNG++PS L +L GL L+LSRN L GPIP +N L G+VPK
Sbjct: 549 FNGTIPS--TLASLKGLQYLDLSRNRLYGPIPNVLQSISVLEHLNVSFNMLEGEVPKEGV 606
Query: 175 FSPWVKLYTAGNDLLHSPCGG 195
F +L GND L CGG
Sbjct: 607 FGNISRLVVTGNDKL---CGG 624
>Medtr7g082310.1 | LRR receptor-like kinase | LC |
chr7:31550481-31552209 | 20130731
Length = 439
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 129 TNLTGLFKLNLSRNNLNGPIPXXXXXXXXXXXXXXXYNNLCGQVPKFSPWVKLYTAGNDL 188
+NLT L L L+ NN G IP NNL GQ+PKFS VKL T GN
Sbjct: 329 SNLTSLVNLTLTNNNFTGSIPKSLTTLPQLQLLDVSRNNLSGQIPKFSSKVKLITRGNAF 388
Query: 189 L---------HSPCGGALSGSPSQT 204
L + +G PS+T
Sbjct: 389 LGLNVSRQGEGEKAAASRNGGPSKT 413