Miyakogusa Predicted Gene

Lj0g3v0196249.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196249.1 tr|G7JDN8|G7JDN8_MEDTR Global transcription
factor group OS=Medicago truncatula GN=MTR_4g065620
PE=4,32.14,0.0000000000003,seg,NULL; coiled-coil,NULL,CUFF.12416.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g065620.1 | hypothetical protein | LC | chr4:24526112-2452...    60   1e-09
Medtr3g028570.1 | hypothetical protein | LC | chr3:9132578-91313...    59   2e-09

>Medtr4g065620.1 | hypothetical protein | LC |
           chr4:24526112-24525131 | 20130731
          Length = 262

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 41/58 (70%)

Query: 75  KEEREDARMRVQKMRRTVFLDENLNSFKELEKLCGYSLADFRISNALMEDIGLILKPE 132
           K++RE A++ +Q ++RT F+D+NL S+ ELE LCG+SL D    N L   +GL+LK E
Sbjct: 179 KKQREAAKLMIQSIKRTAFIDDNLLSYNELENLCGHSLQDCNKLNPLKTFVGLVLKDE 236


>Medtr3g028570.1 | hypothetical protein | LC | chr3:9132578-9131370
           | 20130731
          Length = 338

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 41/58 (70%)

Query: 75  KEEREDARMRVQKMRRTVFLDENLNSFKELEKLCGYSLADFRISNALMEDIGLILKPE 132
           K++RE A++ +Q ++RT F+D+NL S+ ELE LCG+SL D    N L   +GL+LK +
Sbjct: 255 KKQREAAKLMIQSIKRTAFIDDNLLSYNELENLCGHSLQDCNKLNPLKTFVGLVLKDD 312