Miyakogusa Predicted Gene

Lj0g3v0195949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0195949.1 Non Characterized Hit- tr|I1MLF1|I1MLF1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57040
PE,97.3,0.0000000000004,no description,NULL; ACTIN-RELATED PROTEIN 2,
ARP2,NULL; ACTIN,Actin-like; Actin,Actin-like;
Actin-l,BP074351.path2.1
         (49 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g027185.2 | actin-related protein ARP4 | HC | chr7:9211642...    79   9e-16
Medtr7g027185.1 | actin-related protein ARP4 | HC | chr7:9211642...    79   9e-16
Medtr7g027185.3 | actin-related protein ARP4 | HC | chr7:9211642...    79   1e-15
Medtr3g095530.3 | actin-related protein 4A | HC | chr3:43648972-...    49   1e-06
Medtr3g095530.1 | actin-related protein 4A | HC | chr3:43649404-...    49   1e-06
Medtr3g095530.2 | actin-related protein 4A | HC | chr3:43649349-...    49   1e-06

>Medtr7g027185.2 | actin-related protein ARP4 | HC |
           chr7:9211642-9202611 | 20130731
          Length = 364

 Score = 79.0 bits (193), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/37 (97%), Positives = 37/37 (100%)

Query: 11  ETTILVKNYTLPDGRVIQVGTERFQAPEALFTPELID 47
           ETTILVKNYTLPDGRVI+VGTERFQAPEALFTPELID
Sbjct: 233 ETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELID 269


>Medtr7g027185.1 | actin-related protein ARP4 | HC |
           chr7:9211642-9202153 | 20130731
          Length = 389

 Score = 79.0 bits (193), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/37 (97%), Positives = 37/37 (100%)

Query: 11  ETTILVKNYTLPDGRVIQVGTERFQAPEALFTPELID 47
           ETTILVKNYTLPDGRVI+VGTERFQAPEALFTPELID
Sbjct: 233 ETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELID 269


>Medtr7g027185.3 | actin-related protein ARP4 | HC |
           chr7:9211642-9202153 | 20130731
          Length = 313

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/37 (97%), Positives = 37/37 (100%)

Query: 11  ETTILVKNYTLPDGRVIQVGTERFQAPEALFTPELID 47
           ETTILVKNYTLPDGRVI+VGTERFQAPEALFTPELID
Sbjct: 233 ETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELID 269


>Medtr3g095530.3 | actin-related protein 4A | HC |
           chr3:43648972-43646353 | 20130731
          Length = 377

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/30 (63%), Positives = 23/30 (76%)

Query: 17  KNYTLPDGRVIQVGTERFQAPEALFTPELI 46
           KNY LPDG+VI +G ERF+ PE LF P +I
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSMI 269


>Medtr3g095530.1 | actin-related protein 4A | HC |
           chr3:43649404-43646240 | 20130731
          Length = 377

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/30 (63%), Positives = 23/30 (76%)

Query: 17  KNYTLPDGRVIQVGTERFQAPEALFTPELI 46
           KNY LPDG+VI +G ERF+ PE LF P +I
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSMI 269


>Medtr3g095530.2 | actin-related protein 4A | HC |
           chr3:43649349-43646307 | 20130731
          Length = 377

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/30 (63%), Positives = 23/30 (76%)

Query: 17  KNYTLPDGRVIQVGTERFQAPEALFTPELI 46
           KNY LPDG+VI +G ERF+ PE LF P +I
Sbjct: 240 KNYELPDGQVITIGAERFRCPEVLFQPSMI 269