Miyakogusa Predicted Gene

Lj0g3v0195659.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0195659.2 Non Characterized Hit- tr|G7LFF0|G7LFF0_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,76.47,0.00000000000008,seg,NULL,CUFF.12371.2
         (138 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g033685.2 | RNA-directed DNA methylation protein | LC | ch...    82   1e-16
Medtr7g033685.1 | RNA-directed DNA methylation protein | LC | ch...    64   4e-11
Medtr7g033700.1 | hypothetical protein | HC | chr7:12288639-1229...    51   4e-07
Medtr8g063090.1 | hypothetical protein | LC | chr8:26417759-2642...    49   1e-06

>Medtr7g033685.2 | RNA-directed DNA methylation protein | LC |
           chr7:12279339-12273128 | 20130731
          Length = 474

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/123 (43%), Positives = 68/123 (55%), Gaps = 31/123 (25%)

Query: 33  WLEINERPFNRPLQHFANL-----------------SITDSAPNGPWFCHGNVGLEINER 75
           WLEINERPF R L  F NL                 ++ +S+P  P   H  V + +  +
Sbjct: 41  WLEINERPFKRSLLDFGNLSISDSSSSQNVGADSETNVAESSPAAPPSKH--VFVRVKRK 98

Query: 76  PLKRPLQDFANLSISDSALNGLEINERPLKRPLRDFANLSISDSAQKVKFNNKKVFMQHV 135
           P + PL  F            LEINERPLKRPL DF NLSI++S+Q  KF+NKKV +QH+
Sbjct: 99  PFQPPLDAF-----------WLEINERPLKRPLLDFGNLSIANSSQD-KFHNKKVLVQHL 146

Query: 136 ETI 138
           +TI
Sbjct: 147 KTI 149



 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/41 (73%), Positives = 32/41 (78%)

Query: 74  ERPLKRPLQDFANLSISDSALNGLEINERPLKRPLRDFANL 114
           +R LKR L DFANLSISDS+ N LEINERP KR L DF NL
Sbjct: 19  DRRLKRTLSDFANLSISDSSQNWLEINERPFKRSLLDFGNL 59



 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/34 (67%), Positives = 26/34 (76%)

Query: 26  QSPLDAFWLEINERPFNRPLQHFANLSITDSAPN 59
           Q PLDAFWLEINERP  RPL  F NLSI +S+ +
Sbjct: 101 QPPLDAFWLEINERPLKRPLLDFGNLSIANSSQD 134


>Medtr7g033685.1 | RNA-directed DNA methylation protein | LC |
           chr7:12277220-12273128 | 20130731
          Length = 394

 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 14/90 (15%)

Query: 49  ANLSITDSAPNGPWFCHGNVGLEINERPLKRPLQDFANLSISDSALNGLEINERPLKRPL 108
           +  ++ +S+P  P   H  V + +  +P + PL  F            LEINERPLKRPL
Sbjct: 8   SETNVAESSPAAPPSKH--VFVRVKRKPFQPPLDAF-----------WLEINERPLKRPL 54

Query: 109 RDFANLSISDSAQKVKFNNKKVFMQHVETI 138
            DF NLSI++S+Q  KF+NKKV +QH++TI
Sbjct: 55  LDFGNLSIANSSQD-KFHNKKVLVQHLKTI 83



 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/32 (71%), Positives = 25/32 (78%)

Query: 26 QSPLDAFWLEINERPFNRPLQHFANLSITDSA 57
          Q PLDAFWLEINERP  RPL  F NLSI +S+
Sbjct: 35 QPPLDAFWLEINERPLKRPLLDFGNLSIANSS 66


>Medtr7g033700.1 | hypothetical protein | HC |
           chr7:12288639-12296017 | 20130731
          Length = 369

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/45 (68%), Positives = 36/45 (80%), Gaps = 3/45 (6%)

Query: 97  LEINERPLKRPLRDFANLSISDSA---QKVKFNNKKVFMQHVETI 138
           LEINERP KRP  DF NLSISDS+   Q+V+ +NKKV +QHVETI
Sbjct: 36  LEINERPFKRPFFDFGNLSISDSSSSSQQVEIHNKKVLVQHVETI 80



 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/27 (77%), Positives = 21/27 (77%)

Query: 25 SQSPLDAFWLEINERPFNRPLQHFANL 51
          S SPLDAFWLEINERPF RP   F NL
Sbjct: 27 SHSPLDAFWLEINERPFKRPFFDFGNL 53


>Medtr8g063090.1 | hypothetical protein | LC |
          chr8:26417759-26423230 | 20130731
          Length = 356

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/25 (84%), Positives = 21/25 (84%)

Query: 27 SPLDAFWLEINERPFNRPLQHFANL 51
          SPLDAFWLEINERPF RPL  F NL
Sbjct: 27 SPLDAFWLEINERPFKRPLLDFGNL 51