Miyakogusa Predicted Gene

Lj0g3v0194299.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0194299.1 Non Characterized Hit- tr|I1MZ82|I1MZ82_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,56.9,1e-18,seg,NULL,CUFF.12282.1
         (143 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g081360.1 | hypothetical protein | HC | chr5:34850073-3485...    76   1e-14
Medtr5g012280.1 | hypothetical protein | LC | chr5:3653222-36510...    64   5e-11
Medtr3g069570.1 | hypothetical protein | HC | chr3:31118242-3112...    59   2e-09

>Medtr5g081360.1 | hypothetical protein | HC |
           chr5:34850073-34852831 | 20130731
          Length = 149

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/132 (52%), Positives = 77/132 (58%), Gaps = 9/132 (6%)

Query: 1   MDTKKKQAGDSSSS-TMNFDHLFGPKDXXXXXXXXXXXXXXXXXPPPPVGRRESRTQVVG 59
           MD  KKQA  SSSS T+ FD LFGPKD                 P P V  R SRTQ VG
Sbjct: 1   MDNNKKQAWSSSSSSTVKFDQLFGPKDPSSASSSSLFGSIFPPPPTPSVEGRGSRTQEVG 60

Query: 60  SRNFSAPGTHSSNTNKGESNSRIICKNYQNEMVEAQPSYFSSSIYYGGQENYSP--RTTQ 117
           S+N  A GT  S+   G S ++  C NYQNE +E  PSY+SSSIYYGGQENYSP  RTT+
Sbjct: 61  SKNLGATGTTPSD---GISYNKNTCTNYQNETME--PSYYSSSIYYGGQENYSPRNRTTE 115

Query: 118 PHQHVVSAINPH 129
           PH HV      H
Sbjct: 116 PH-HVFKKDKNH 126


>Medtr5g012280.1 | hypothetical protein | LC | chr5:3653222-3651032
           | 20130731
          Length = 144

 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 11/113 (9%)

Query: 1   MDTKKKQA--GDSSSSTMNFDHLFGPKDXXXXXXXXXXXXXXXXXPPPPVGRRESRTQVV 58
           MD  K Q     +SSST+NF+ LF  KD                 P P V  + SRT+ V
Sbjct: 1   MDNNKNQTCSSSNSSSTVNFNQLFSSKDSTTASFSSFFDSLF---PQPSVEGKGSRTEEV 57

Query: 59  GSRNFSAPGTHSSNTNKGESNSRIICKNYQNEMVEAQPSYFSSSIYYGGQENY 111
           GS++  APGT +S+ +   +NS     +YQNE VE  P+YFSSSI+YGG E+Y
Sbjct: 58  GSKSLEAPGTPNSDISNKNTNS----TDYQNETVE--PTYFSSSIHYGGCEDY 104


>Medtr3g069570.1 | hypothetical protein | HC |
           chr3:31118242-31121359 | 20130731
          Length = 167

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 59/110 (53%), Gaps = 2/110 (1%)

Query: 8   AGDSSSSTMNFDHLFGPKDXXXXXXXXXXXXXXXXXPPPPVGRRESRTQVVGSRNFSAPG 67
           AG SSS+  NFDHLFGPKD                 PP   G R+S    +GS  + APG
Sbjct: 13  AGSSSSTPTNFDHLFGPKDPSTTSSSSNSIFSSIFPPPSTGGWRDSTRHDMGSNTYGAPG 72

Query: 68  THSS-NTNKGESNSRIICKNYQNEMVEAQPSYFSSSIYYGGQENYSPRTT 116
            +S+   N    N+      YQNE VE   +Y+SSSIYYGGQENY+  TT
Sbjct: 73  NYSNKGGNSANKNTGSDTTYYQNETVEPS-NYYSSSIYYGGQENYNSPTT 121