Miyakogusa Predicted Gene

Lj0g3v0193529.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0193529.1 Non Characterized Hit- tr|E1ZQM8|E1ZQM8_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,34.27,8e-19,Galactose-binding domain-like,Galactose-binding
domain-like; no description,NULL; seg,NULL; SUBFAMIL,CUFF.12245.1
         (263 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g100000.2 | beta-like galactosidase | HC | chr2:42908368-4...   278   3e-75
Medtr2g100000.1 | beta-like galactosidase | HC | chr2:42906588-4...   278   4e-75

>Medtr2g100000.2 | beta-like galactosidase | HC |
           chr2:42908368-42922742 | 20130731
          Length = 556

 Score =  278 bits (711), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 129/176 (73%), Positives = 152/176 (86%), Gaps = 2/176 (1%)

Query: 90  EDSEGVSYYLFLF--MGILSSVYLDGEIVQGWKMFPVPLHNLNEVPSYNPIIQSSYSALK 147
           E+   V+Y  F+F   GILSSVYLDG  VQGWKMFP+PLHNLNEVP+YN I+Q+SYSA  
Sbjct: 379 ENMGRVNYGPFIFDRKGILSSVYLDGNRVQGWKMFPIPLHNLNEVPNYNRIMQASYSAFG 438

Query: 148 EISASRKRLIYKSENTSREPAFYSGRFFIDKSSQVKDTFISFNNWGKGIAFVNDFNIGRY 207
           EIS SRKRL+ KSENTS+EPAFYSG F IDK+SQVKDTF+SF NWGKG+ FVNDFN+GRY
Sbjct: 439 EISTSRKRLMNKSENTSKEPAFYSGHFLIDKTSQVKDTFLSFRNWGKGVVFVNDFNLGRY 498

Query: 208 WPVRGPQCNLYVPAPILKQGDNFLVILELESPDPKLVVQTVDEPNFTCGSSEVNVH 263
           WP+RGPQCNLYVPAP+LKQGDNF+VI ELESPDP L+V +VDEP++TCG + +N+H
Sbjct: 499 WPLRGPQCNLYVPAPVLKQGDNFVVIFELESPDPNLLVHSVDEPDYTCGFNGMNIH 554


>Medtr2g100000.1 | beta-like galactosidase | HC |
           chr2:42906588-42922742 | 20130731
          Length = 694

 Score =  278 bits (711), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 129/176 (73%), Positives = 152/176 (86%), Gaps = 2/176 (1%)

Query: 90  EDSEGVSYYLFLF--MGILSSVYLDGEIVQGWKMFPVPLHNLNEVPSYNPIIQSSYSALK 147
           E+   V+Y  F+F   GILSSVYLDG  VQGWKMFP+PLHNLNEVP+YN I+Q+SYSA  
Sbjct: 517 ENMGRVNYGPFIFDRKGILSSVYLDGNRVQGWKMFPIPLHNLNEVPNYNRIMQASYSAFG 576

Query: 148 EISASRKRLIYKSENTSREPAFYSGRFFIDKSSQVKDTFISFNNWGKGIAFVNDFNIGRY 207
           EIS SRKRL+ KSENTS+EPAFYSG F IDK+SQVKDTF+SF NWGKG+ FVNDFN+GRY
Sbjct: 577 EISTSRKRLMNKSENTSKEPAFYSGHFLIDKTSQVKDTFLSFRNWGKGVVFVNDFNLGRY 636

Query: 208 WPVRGPQCNLYVPAPILKQGDNFLVILELESPDPKLVVQTVDEPNFTCGSSEVNVH 263
           WP+RGPQCNLYVPAP+LKQGDNF+VI ELESPDP L+V +VDEP++TCG + +N+H
Sbjct: 637 WPLRGPQCNLYVPAPVLKQGDNFVVIFELESPDPNLLVHSVDEPDYTCGFNGMNIH 692